Construction of an oesophageal cancer-specific ceRNA network based on miRNA, lncRNA, and mRNA expression data

Table 2 mRNA pathway analysis in oesophageal squamous cell carcinoma

Path_id	Path_name	Path_diffgene_count	Path_gene_count	Enrichment	P value	FDR
05202	Transcriptional misregulation in cancer	12	179	17.67528856	2.34961E-11	3.94734E-09
04512	ECM-receptor interaction	9	87	27.27479872	2.19839E-10	1.84664E-08
04510	Focal adhesion	10	207	12.73702356	3.3619E-08	1.79605E-06
04151	PI3K-Akt signalling pathway	12	345	9.170656962	4.27632E-08	1.79605E-06
05146	Amoebiasis	7	108	17.08883994	8.29201E-07	2.78612E-05
01100	Metabolic pathways	19	1234	4.059539194	1.27125E-06	3.5595E-05
05200	Pathways in cancer	11	397	7.305340716	1.71545E-06	4.11707E-05
04810	Regulation of actin cytoskeleton	8	214	9.856313558	7.4028E-06	0.000155459
00590	Arachidonic acid metabolism	5	62	21.26261191	1.62994E-05	0.000304255
04115	p53 signalling pathway	5	68	19.38649909	2.57756E-05	0.00043303
04060	Cytokine-cytokine receptor interaction	8	265	7.959438118	3.5607E-05	0.000543816
04974	Protein digestion and absorption	5	90	14.64757709	0.000101556	0.001421784
04666	Fc gamma R-mediated phagocytosis	5	92	14.3291515	0.000112939	0.001459525
05205	Proteoglycans in cancer	6	203	7.792799635	0.000540094	0.006142299
04610	Complement and coagulationcasc	4	69	15.28442827	0.000574387	0.006142299
04611	Platelet activation	5	130	10.14063029	0.000584981	0.006142299
05132	Salmonella infection	4	86	12.2630878	0.001341668	0.01252223
05222	Small cell lung cancer	4	86	12.2630878	0.001341668	0.01252223
05323	Rheumatoid arthritis	4	89	11.84972529	0.001529001	0.01351959
00564	Glycerophospholipid metabolism	4	95	11.10132159	0.001958567	0.016451962