Basic Study
Copyright ©The Author(s) 2017.
World J Gastroenterol. Aug 21, 2017; 23(31): 5700-5712
Published online Aug 21, 2017. doi: 10.3748/wjg.v23.i31.5700
Table 1 Disease activity index score parameters
ScoreBody weight lossStool consistencyRectal bleeding
00%-1%NormalNone
11%-5%Soft and shapedBetween
25%-10%LooseSlight
310%-15%BetweenBetween
4> 15%DiarrheaGross bleeding
Table 2 Histological scoring system used in this study
ScoreDamaged areaMucodepletion of glandsTissue damageInflammatory cell infiltration
0N/ANoneNo mucosal damageOccasional inflammatory cells in the lamina propria
1≤ 25%MildDiscrete epithelial lesionsIncreased numbers of inflammatory cells in the lamina propria
2≤ 50%ModerateSurface mucosal erosion or focal ulcerationConfluence inflammatory cells, extending into the submucosa
3≤ 75%ModerateExtensive mucosal damage and extension into deeper structures of the bowel wallTransmural extension of the infiltrate
4≤ 100%Severe
Table 3 Gene-specific primer pairs used in the study
Primer namePrimer sequenceProduct length (bp)
M-GAPDHForward5’-TGAAGGGTGGAGCCAAAAG-3’227
Reverse5’-AGTCTTCTGGGTGGCAGTGAT-3’
M-IL-6Forward5’-CTTCTTGGGACTGATGCTGGT-3’171
Reverse5’-CACAACTCTTTTCTCATTTCCACG-3’
M-IL-10Forward5’-TACAGCCGGGAAGACAATAACT-3’142
Reverse5’-AGGAGTCGGTTAGCAGTATGTTG-3’
M-TNF-αForward5`-TCCCCAAAGGGATGAGAAGTT-3’298
Reverse5’-GAGGAGGTTGACTTTCTCCTGG-3’
M-TGF-βForward5’-AGAGCCCTGGATACCAACTATTG-3’286
Reverse5’-TGCGACCCACGTAGTAGACG-3’
M-IFN-γForward5’-CTCAAGTGGCATAGATGTGGAAG-’250
Reverse5’-GACCTCAAACTTGGCAATACTCA-3’
M-IL-1bForward5’-GGGCCTCAAAGGAAAGAATCT-3’195
Reverse5’-GAGGTGCTGATGTACCAGTTGG-3’
M-IL-17aForward5’-GTCTTTAACTCCCTTGGCGC-3’136
Reverse5’-GGCACTGAGCTTCCCAGATC-3’
M-IRE1aForward5’-ACACACCGACCACCGTATCTC-3’157
Reverse5’-GGGTAAGTGATGATGAACGCC-3’
M-IRE1bForward5’-TGGACGGTCCCACAACAGAT-3’140
Reverse5’-GGGAGGTTCGTGGTATCCAA-3’
M-GRP78Forward5’-GATGAAATTGTTCTGGTTGGTGG-3’203
Reverse5’-AGTGTAAGGGGACAAACATCAAG-3’
M-CHOPForward5’-GGAGCTGGAAGCCTGGTATG-3’285
Reverse5’-GGGCACTGACCACTCTGTTTC-3’