Frontier
Copyright ©The Author(s) 2017.
World J Gastroenterol. May 7, 2017; 23(17): 3022-3029
Published online May 7, 2017. doi: 10.3748/wjg.v23.i17.3022
Table 1 Selected CpG island methylation phenotype genes[33]
MINT1BRAFP14RASSF2
MINT2TIMP3SOCS1HAND1
MINT12RIZ1LOXCACNA10
MINT17HIC1WRNMGMT
MINT25IGF2ADAMTS1FBN2
MINT27IGFB3EDIL3THBD
MINT31CHFRELM01UCHL1
P16NEUROG1DUSP26STOX2
MLH1CRABP1RUNX3
Table 2 Pathways enriched for BRAF mutant associated promoter methylation
BRAF mutations specific promoterAssociated genes
PI3 kinase pathwayFOXB1; FOXB2, FOXD3, CCND1, GSK3A
Insulin/IGF pathwayFOXB1; FOXB2, FOXD3; GSK3A
Hedgehog signaling pathwaySMO; GSK3A; CREBBP
Wnt signalingNKD2; GNG4; CCND1; GSK3A; CREBBP
Transcription-regulation by bZIP transcription factorCREBBP, MTERF; TAF7