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For: Swidsinski A, Loening-Baucke V, Lochs H, Hale LP. Spatial organization of bacterial flora in normal and inflamed intestine: A fluorescence in situ hybridization study in mice. World J Gastroenterol 2005; 11(8): 1131-1140 [PMID: 15754393 DOI: 10.3748/wjg.v11.i8.1131]
URL: https://www.wjgnet.com/1007-9327/full/v11/i8/1131.htm
Number Citing Articles
1
Lena Öhman, Hans Törnblom, Magnus Simrén. Crosstalk at the mucosal border: importance of the gut microenvironment in IBSNature Reviews Gastroenterology & Hepatology 2015; 12(1): 36 doi: 10.1038/nrgastro.2014.200
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Lipi Poojara, Dhaval K. Acharya, Jalpa Patel, Rakesh M. Rawal. Microbiome-Gut-Brain Axis2022; : 187 doi: 10.1007/978-981-16-1626-6_8
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Tanja Petnicki-Ocwieja, Tomas Hrncir, Yuen-Joyce Liu, Amlan Biswas, Tomas Hudcovic, Helena Tlaskalova-Hogenova, Koichi S. Kobayashi. Nod2 is required for the regulation of commensal microbiota in the intestineProceedings of the National Academy of Sciences 2009; 106(37): 15813 doi: 10.1073/pnas.0907722106
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Annalisa Ciabattini, Raffaela Olivieri, Elisa Lazzeri, Donata Medaglini. Role of the Microbiota in the Modulation of Vaccine Immune ResponsesFrontiers in Microbiology 2019; 10 doi: 10.3389/fmicb.2019.01305
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Bärbel Jung, Peter Matthiessen, Kenneth Smedh, Erik Nilsson, Ulrika Ransjö, Lars Påhlman. Mechanical bowel preparation does not affect the intramucosal bacterial colony countInternational Journal of Colorectal Disease 2010; 25(4): 439 doi: 10.1007/s00384-009-0863-3
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Gráinne Lennon, Áine Balfe, Helen Earley, Liam A Devane, Aonghus Lavelle, Desmond C Winter, J Calvin Coffey, P Ronan O'Connell. Influences of the colonic microbiome on the mucous gel layer in ulcerative colitisGut Microbes 2014; 5(3): 277 doi: 10.4161/gmic.28793
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Tetyana V. Koval, Ivan V. Chopey, Mykhaylo M. Hechko, Artur V. Kurakh. NON-ALCOHOLIC FATTY LIVER DISEASE IN THE CONTEXT OF ALTERED GUT MICROBIOTAWiadomości Lekarskie 2021; 74(4): 1007 doi: 10.36740/WLek202104137
8
Britta Lötstedt, Martin Stražar, Ramnik Xavier, Aviv Regev, Sanja Vickovic. Spatial host–microbiome sequencing reveals niches in the mouse gutNature Biotechnology 2023;  doi: 10.1038/s41587-023-01988-1
9
Navami Koyande, Madhusree Gangopadhyay, Shashidhar Thatikonda, Aravind Kumar Rengan. The role of gut microbiota in the development of colorectal cancer: a reviewInternational Journal of Colorectal Disease 2022; 37(7): 1509 doi: 10.1007/s00384-022-04192-w
10
Anna M. Borowiec, Beate C. Sydora, Jason Doyle, Le Luo Guan, Thomas A. Churchill, Karen Madsen, Richard N. Fedorak. Small bowel fibrosis and systemic inflammatory response after ileocolonic anastomosis in IL-10 null miceJournal of Surgical Research 2012; 178(1): 147 doi: 10.1016/j.jss.2012.01.048
11
Sarah Tomkovich, Christine M. Dejea, Kathryn Winglee, Julia L. Drewes, Liam Chung, Franck Housseau, Jillian L. Pope, Josee Gauthier, Xiaolun Sun, Marcus Mühlbauer, Xiuli Liu, Payam Fathi, Robert A. Anders, Sepideh Besharati, Ernesto Perez-Chanona, Ye Yang, Hua Ding, Xinqun Wu, Shaoguang Wu, James R. White, Raad Z. Gharaibeh, Anthony A. Fodor, Hao Wang, Drew M. Pardoll, Christian Jobin, Cynthia L. Sears. Human colon mucosal biofilms from healthy or colon cancer hosts are carcinogenicJournal of Clinical Investigation 2019; 129(4): 1699 doi: 10.1172/JCI124196
12
Kellyanne Duncan, Kelly Carey-Ewend, Shipra Vaishnava. Spatial analysis of gut microbiome reveals a distinct ecological niche associated with the mucus layerGut Microbes 2021; 13(1) doi: 10.1080/19490976.2021.1874815
13
Amit H. Sachdev, Mark Pimentel. Antibiotics for Irritable Bowel Syndrome: Rationale and Current EvidenceCurrent Gastroenterology Reports 2012; 14(5): 439 doi: 10.1007/s11894-012-0284-2
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Rna-Based Regulation in Human Health and Disease2020; : 117 doi: 10.1016/B978-0-12-817193-6.00005-4
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Luis M. Bustos Fernandez, Juan S. Lasa, Fernando Man. Intestinal MicrobiotaJournal of Clinical Gastroenterology 2014; 48(8): 657 doi: 10.1097/MCG.0000000000000153
16
Jeremy Rothschild, Tianyi Ma, Joshua N. Milstein, Anton Zilman, Daniel Weissman. Spatial exclusion leads to “tug-of-war” ecological dynamics between competing species within microchannelsPLOS Computational Biology 2023; 19(12): e1010868 doi: 10.1371/journal.pcbi.1010868
17
J. Landy, H. O. Al-Hassi, S. D. McLaughlin, S. C. Knight, P. J. Ciclitira, R. J. Nicholls, S. K. Clark, A. L. Hart. Etiology of pouchitis*Inflammatory Bowel Diseases 2012; 18(6): 1146 doi: 10.1002/ibd.21911
18
Sujata Das, Charu Khanna, Shalini Singh, Shilpa Nandi, Reema Verma. Microbial Diversity, Interventions and Scope2020; : 349 doi: 10.1007/978-981-15-4099-8_20
19
Alexander Swidsinski, Victoria Ung, Beate C. Sydora, Vera Loening-Baucke, Yvonne Doerffel, Hans Verstraelen, Richard N. Fedorak. Bacterial Overgrowth and Inflammation of Small Intestine After Carboxymethylcellulose Ingestion in Genetically Susceptible MiceInflammatory Bowel Diseases 2009; 15(3): 359 doi: 10.1002/ibd.20763
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Satyanagalakshmi Karri, Manohar Babu Vadela, Vijay A. K. B. Gundi. Human Microbiome in Health, Disease, and Therapy2023; : 219 doi: 10.1007/978-981-99-5114-7_12
21
Brianna Swartwout, Xin M. Luo. Implications of Probiotics on the Maternal-Neonatal Interface: Gut Microbiota, Immunomodulation, and AutoimmunityFrontiers in Immunology 2018; 9 doi: 10.3389/fimmu.2018.02840
22
Ömrüm Aydin, Max Nieuwdorp, Victor Gerdes. The Gut Microbiome as a Target for the Treatment of Type 2 DiabetesCurrent Diabetes Reports 2018; 18(8) doi: 10.1007/s11892-018-1020-6
23
Ulf Meyer-Hoffert, Mathias Hornef, Birgitta Henriques-Normark, Staffan Normark, Mats Andersson, Katrin Pütsep. Identification of heparin/heparan sulfate interacting protein as a major broad‐spectrum antimicrobial protein in lung and small intestineThe FASEB Journal 2008; 22(7): 2427 doi: 10.1096/fj.07-103440
24
Alexander Crits-Christoph, Haley Anne Hallowell, Kalia Koutouvalis, Jotham Suez. Good microbes, bad genes? The dissemination of antimicrobial resistance in the human microbiomeGut Microbes 2022; 14(1) doi: 10.1080/19490976.2022.2055944
25
Min Wang, Hongyu Liu, Mingshu Huang, Yisheng Huang, Yue Ming, Weixing Chen, Yuanxin Chen, Zhengming Tang, Bo Jia. Immunomodulatory functions of microorganisms in tissue regenerative healingActa Biomaterialia 2023; 172: 38 doi: 10.1016/j.actbio.2023.10.007
26
Preksha Gaur, Yesheswini Rajendran, Bhagyashree Srivastava, Manasvini Markandey, Vered Fishbain-Yoskovitz, Gayatree Mohapatra, Aamir Suhail, Shikha Chaudhary, Shaifali Tyagi, Subhash Chandra Yadav, Amit Kumar Pandey, Yifat Merbl, Avinash Bajaj, Vineet Ahuja, Chittur Srikanth. Rab7-dependent regulation of goblet cell protein CLCA1 modulates gastrointestinal homeostasiseLife 2024; 12 doi: 10.7554/eLife.89776.3
27
Claire J Steves, Sarah Bird, Frances MK Williams, Tim D Spector. The Microbiome and Musculoskeletal Conditions of Aging: A Review of Evidence for Impact and Potential TherapeuticsJournal of Bone and Mineral Research 2016; 31(2): 261 doi: 10.1002/jbmr.2765
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Bailey C. E. Peck, Michael T. Shanahan, Ajeet P. Singh, Praveen Sethupathy. Gut Microbial Influences on the Mammalian Intestinal Stem Cell NicheStem Cells International 2017; 2017: 1 doi: 10.1155/2017/5604727
29
Katherine L. Bryant, Christi Hansen, Erin E. Hecht. Fermentation technology as a driver of human brain expansionCommunications Biology 2023; 6(1) doi: 10.1038/s42003-023-05517-3
30
Maciej Chichlowski, Laura P. Hale. Bacterial-mucosal interactions in inflammatory bowel disease—an alliance gone badAmerican Journal of Physiology-Gastrointestinal and Liver Physiology 2008; 295(6): G1139 doi: 10.1152/ajpgi.90516.2008
31
Marie Vétizou, Romain Daillère, Laurence Zitvogel. Microbiote intestinal et réponses aux thérapies anti-tumoralesmédecine/sciences 2016; 32(11): 974 doi: 10.1051/medsci/20163211013
32
D. Ozaki, R. Kubota, T. Maeno, M. Abdelhakim, N. Hitosugi. Association between gut microbiota, bone metabolism, and fracture risk in postmenopausal Japanese womenOsteoporosis International 2021; 32(1): 145 doi: 10.1007/s00198-020-05728-y
33
Manfredi d’Afflitto, Advait Upadhyaya, Alicia Green, Madusha Peiris. Association Between Sex Hormone Levels and Gut Microbiota Composition and Diversity—A Systematic ReviewJournal of Clinical Gastroenterology 2022; 56(5): 384 doi: 10.1097/MCG.0000000000001676
34
Manan Bawa, Vivek A. Saraswat. Gut–Liver Axis: Role of InflammasomesJournal of Clinical and Experimental Hepatology 2013; 3(2): 141 doi: 10.1016/j.jceh.2013.03.225
35
Gertrude O. Oppong, Glenn J. Rapsinski, Tiffanny N. Newman, Jessalyn H. Nishimori, Steven G. Biesecker, Çagla Tükel, J. B. Bliska. Epithelial Cells Augment Barrier Function via Activation of the Toll-Like Receptor 2/Phosphatidylinositol 3-Kinase Pathway upon Recognition of Salmonella enterica Serovar Typhimurium Curli Fibrils in the GutInfection and Immunity 2013; 81(2): 478 doi: 10.1128/IAI.00453-12
36
Michael C. Abt, Charlie G. Buffie, Bože Sušac, Simone Becattini, Rebecca A. Carter, Ingrid Leiner, James W. Keith, David Artis, Lisa C. Osborne, Eric G. Pamer. TLR-7 activation enhances IL-22–mediated colonization resistance against vancomycin-resistant enterococcusScience Translational Medicine 2016; 8(327) doi: 10.1126/scitranslmed.aad6663
37
Inna Sekirov, Shannon L. Russell, L. Caetano M. Antunes, B. Brett Finlay. Gut Microbiota in Health and DiseasePhysiological Reviews 2010; 90(3): 859 doi: 10.1152/physrev.00045.2009
38
Michael Napolitano, Mihai Covasa. Microbiota Transplant in the Treatment of Obesity and Diabetes: Current and Future PerspectivesFrontiers in Microbiology 2020; 11 doi: 10.3389/fmicb.2020.590370
39
Gregory P. Donaldson, S. Melanie Lee, Sarkis K. Mazmanian. Gut biogeography of the bacterial microbiotaNature Reviews Microbiology 2016; 14(1): 20 doi: 10.1038/nrmicro3552
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Ayesha Shah, Nicholas J. Talley, Gerald Holtmann. Current and Future Approaches for Diagnosing Small Intestinal Dysbiosis in Patients With Symptoms of Functional DyspepsiaFrontiers in Neuroscience 2022; 16 doi: 10.3389/fnins.2022.830356
41
Hajara Aslam, Fiona Collier, Jessica A Davis, Thomas P Quinn, Martin O'Hely, Julie A Pasco, Felice N Jacka, Amy Loughman. Gut Microbiome Diversity and Composition Are Associated with Habitual Dairy Intakes: A Cross-Sectional Study in MenThe Journal of Nutrition 2021; 151(11): 3400 doi: 10.1093/jn/nxab252
42
Kalaiselvi Krishnamoorthy, Ponnulakshmi Rajagopal, Selvaraj Jayaraman. Gut Microbiome and Brain Ageing2024; : 71 doi: 10.1007/978-981-99-8803-7_4
43
Thomas D. Leser, Lars Mølbak. Better living through microbial action: the benefits of the mammalian gastrointestinal microbiota on the hostEnvironmental Microbiology 2009; 11(9): 2194 doi: 10.1111/j.1462-2920.2009.01941.x
44
Maximilian Baumgartner, Michaela Lang, Hunter Holley, Daniel Crepaz, Bela Hausmann, Petra Pjevac, Doris Moser, Felix Haller, Fabian Hof, Andrea Beer, Elisabeth Orgler, Adrian Frick, Vineeta Khare, Rayko Evstatiev, Susanne Strohmaier, Christian Primas, Werner Dolak, Thomas Köcher, Kristaps Klavins, Timo Rath, Markus F. Neurath, David Berry, Athanasios Makristathis, Markus Muttenthaler, Christoph Gasche. Mucosal Biofilms Are an Endoscopic Feature of Irritable Bowel Syndrome and Ulcerative ColitisGastroenterology 2021; 161(4): 1245 doi: 10.1053/j.gastro.2021.06.024
45
Bharati Kadamb Patel, Kadamb Haribhai Patel, Ryan Yuki Huang, Chuen Neng Lee, Shabbir M. Moochhala. The Gut-Skin Microbiota Axis and Its Role in Diabetic Wound Healing—A Review Based on Current LiteratureInternational Journal of Molecular Sciences 2022; 23(4): 2375 doi: 10.3390/ijms23042375
46
Nicole M. Koropatkin, Elizabeth A. Cameron, Eric C. Martens. How glycan metabolism shapes the human gut microbiotaNature Reviews Microbiology 2012; 10(5): 323 doi: 10.1038/nrmicro2746
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O. O. Hurenko, S. B. Drozdovska. INTESTINAL DYSBIOSIS AS A FACTOR IN THE DEVELOPMENT OF METABOLIC SYNDROME AND INSULIN RESISTANCE Bulletin of Problems Biology and Medicine 2021; 1(1): 257 doi: 10.29254/2077-4214-2021-1-159-257-264
48
Ashis K. Samanta, Valeria A. Torok, Nigel J. Percy, Suzanne M. Abimosleh, Gordon S. Howarth. Microbial fingerprinting detects unique bacterial communities in the faecal microbiota of rats with experimentally-induced colitisThe Journal of Microbiology 2012; 50(2): 218 doi: 10.1007/s12275-012-1362-8
49
M. A. Livzan, G. R. Bicbavova, A. E. Romanyuk. Ulcerative colitis: focus on colonic mucosal resistanceBulletin of Siberian Medicine 2022; 21(1): 121 doi: 10.20538/1682-0363-2022-1-121-132
50
Melanie Schirmer, Lee Denson, Hera Vlamakis, Eric A. Franzosa, Sonia Thomas, Nathan M. Gotman, Paul Rufo, Susan S. Baker, Cary Sauer, James Markowitz, Marian Pfefferkorn, Maria Oliva-Hemker, Joel Rosh, Anthony Otley, Brendan Boyle, David Mack, Robert Baldassano, David Keljo, Neal LeLeiko, Melvin Heyman, Anne Griffiths, Ashish S. Patel, Joshua Noe, Subra Kugathasan, Thomas Walters, Curtis Huttenhower, Jeffrey Hyams, Ramnik J. Xavier. Compositional and Temporal Changes in the Gut Microbiome of Pediatric Ulcerative Colitis Patients Are Linked to Disease CourseCell Host & Microbe 2018; 24(4): 600 doi: 10.1016/j.chom.2018.09.009
51
Torsten P.M. Scheithauer, Geesje M. Dallinga-Thie, Willem M. de Vos, Max Nieuwdorp, Daniël H. van Raalte. Causality of small and large intestinal microbiota in weight regulation and insulin resistanceMolecular Metabolism 2016; 5(9): 759 doi: 10.1016/j.molmet.2016.06.002
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Conrad R. Cole, Thomas R. Ziegler. Small bowel bacterial overgrowth: A negative factor in gut adaptation in pediatric SBSCurrent Gastroenterology Reports 2007; 9(6): 456 doi: 10.1007/s11894-007-0059-3
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Daisuke Chinda, Toshihiko Takada, Tatsuya Mikami, Kensuke Shimizu, Kosuke Oana, Tetsu Arai, Kazuki Akitaya, Hirotake Sakuraba, Miyuki Katto, Yusuke Nagara, Hiroshi Makino, Daichi Fujii, Kenji Oishi, Shinsaku Fukuda. Spatial distribution of live gut microbiota and bile acid metabolism in various parts of human large intestineScientific Reports 2022; 12(1) doi: 10.1038/s41598-022-07594-6
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Charles N. Bernstein, Jessica D. Forbes. Gut Microbiome in Inflammatory Bowel Disease and Other Chronic Immune-Mediated Inflammatory DiseasesInflammatory Intestinal Diseases 2017; 2(2): 116 doi: 10.1159/000481401
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Jill M. Hoffman, Charalabos Pothoulakis. Inflammation - From Molecular and Cellular Mechanisms to the Clinic2017; : 437 doi: 10.1002/9783527692156.ch18
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Alexander Swidsinski, Beate C. Sydora, Yvonne Doerffel, Vera Loening-Baucke, Mario Vaneechoutte, Maryla Lupicki, Juergen Scholze, Herbert Lochs, Levinus A. Dieleman. Viscosity gradient within the mucus layer determines the mucosal barrier function and the spatial organization of the intestinal microbiotaInflammatory Bowel Diseases 2007; 13(8): 963 doi: 10.1002/ibd.20163
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Anitra D Thomas, William Parker. Cultivation of epithelial-associated microbiota by the immune systemFuture Microbiology 2010; 5(10): 1483 doi: 10.2217/fmb.10.108
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Angelo Pietro Femia, Alexander Swidsinski, Piero Dolara, Maddalena Salvadori, Amedeo Amedei, Giovanna Caderni, Yohannes Tesfaigzi. Mucin Depleted Foci, Colonic Preneoplastic Lesions Lacking Muc2, Show Up-Regulation of Tlr2 but Not Bacterial InfiltrationPLoS ONE 2012; 7(1): e29918 doi: 10.1371/journal.pone.0029918
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Volker Mai, Peter V Draganov. Recent advances and remaining gaps in our knowledge of associations between gut microbiota and human healthWorld Journal of Gastroenterology 2009; 15(1): 81-85 doi: 10.3748/wjg.15.81
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Fengna Chu, Mingchao Shi, Yue Lang, Donghui Shen, Tao Jin, Jie Zhu, Li Cui. Gut Microbiota in Multiple Sclerosis and Experimental Autoimmune Encephalomyelitis: Current Applications and Future PerspectivesMediators of Inflammation 2018; 2018: 1 doi: 10.1155/2018/8168717
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Identifying Microorganisms Involved in Specific Pathogen Suppression in SoilAnnual Review of Phytopathology 2007; 45(1): 153 doi: 10.1146/annurev.phyto.45.062806.094354
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Q. Manyan Fung, Andrew Szilagyi. Carbohydrate Elimination or Adaptation Diet for Symptoms of Intestinal Discomfort in IBD: Rationales for “Gibsons’ Conundrum”International Journal of Inflammation 2012; 2012: 1 doi: 10.1155/2012/493717
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Hajara Aslam, Wolfgang Marx, Tetyana Rocks, Amy Loughman, Vinoomika Chandrasekaran, Anu Ruusunen, Samantha L. Dawson, Madeline West, Eva Mullarkey, Julie A. Pasco, Felice N. Jacka. The effects of dairy and dairy derivatives on the gut microbiota: a systematic literature reviewGut Microbes 2020; 12(1): 1799533 doi: 10.1080/19490976.2020.1799533
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James Borneman, J. Ole Becker, Elizabeth Bent, Brian Lanoil, Brian McSpadden Gardener, Rabiu Olatinwo, Laura Presley, Alexandra J. Scupham, Lea Valinsky, Bei Yin. Manual of Environmental Microbiology2007; : 748 doi: 10.1128/9781555815882.ch61
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José E. Belizário, Joel Faintuch, Miguel Garay-Malpartida. Gut Microbiome Dysbiosis and Immunometabolism: New Frontiers for Treatment of Metabolic DiseasesMediators of Inflammation 2018; 2018: 1 doi: 10.1155/2018/2037838
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Philippe J. Sansonetti, Ruslan Medzhitov. Learning Tolerance while Fighting IgnoranceCell 2009; 138(3): 416 doi: 10.1016/j.cell.2009.07.024
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Lawrence J Brandt. American Journal of Gastroenterology Lecture: Intestinal Microbiota and the Role of Fecal Microbiota Transplant (FMT) in Treatment of C. difficile InfectionAmerican Journal of Gastroenterology 2013; 108(2): 177 doi: 10.1038/ajg.2012.450
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John Ferguson, Brian Ravert, Michael Gailey. Aspiration: /aspə’rāSH(ə)n/: Noun: An Ambiguous Term Used for a Diagnosis of UncertaintyClinical Pulmonary Medicine 2018; 25(5): 177 doi: 10.1097/CPM.0000000000000277
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Rowann Bowcutt, Ruth Forman, Maria Glymenaki, Simon Richard Carding, Kathryn Jane Else, Sheena Margaret Cruickshank. Heterogeneity across the murine small and large intestineWorld Journal of Gastroenterology 2014; 20(41): 15216-15232 doi: 10.3748/wjg.v20.i41.15216
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Yuki Young, Maria T. Abreu. Advances in the pathogenesis of inflammatory bowel diseaseCurrent Gastroenterology Reports 2006; 8(6): 470 doi: 10.1007/s11894-006-0037-1
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A. Swidsinski, V. Loening-Baucke, S. Kirsch, Y. Doerffel. Functional biostructure of colonic microbiota (central fermenting area, germinal stock area and separating mucus layer) in healthy subjects and patients with diarrhea treated with Saccharomyces boulardiiGastroentérologie Clinique et Biologique 2010; 34: S79 doi: 10.1016/S0399-8320(10)70025-7
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Nelson Andrade, Cláudia Marques, Sara Andrade, Cláudia Silva, Ilda Rodrigues, Luísa Guardão, João T. Guimarães, Elisa Keating, Conceição Calhau, Fátima Martel. Effect of chrysin on changes in intestinal environment and microbiome induced by fructose-feeding in ratsFood & Function 2019; 10(8): 4566 doi: 10.1039/C9FO01142K
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Thilini N. Jayasinghe, Valentina Chiavaroli, David J. Holland, Wayne S. Cutfield, Justin M. O'Sullivan. The New Era of Treatment for Obesity and Metabolic Disorders: Evidence and Expectations for Gut Microbiome TransplantationFrontiers in Cellular and Infection Microbiology 2016; 6 doi: 10.3389/fcimb.2016.00015
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Shan Li, Maikel P. Peppelenbosch, Ron Smits. Bacterial biofilms as a potential contributor to mucinous colorectal cancer formationBiochimica et Biophysica Acta (BBA) - Reviews on Cancer 2019; 1872(1): 74 doi: 10.1016/j.bbcan.2019.05.009
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R. Balfour Sartor. Microbial Influences in Inflammatory Bowel DiseasesGastroenterology 2008; 134(2): 577 doi: 10.1053/j.gastro.2007.11.059
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Melanie Craven, Charlotte E. Egan, Scot E. Dowd, Sean P. McDonough, Belgin Dogan, Eric Y. Denkers, Dwight Bowman, Ellen J. Scherl, Kenneth W. Simpson, Markus M. Heimesaat. Inflammation Drives Dysbiosis and Bacterial Invasion in Murine Models of Ileal Crohn’s DiseasePLoS ONE 2012; 7(7): e41594 doi: 10.1371/journal.pone.0041594
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Mahadev Dhami, Khadga Raj, Shamsher Singh. Relevance of gut microbiota to Alzheimer's Disease (AD): Potential effects of probiotic in management of ADAging and Health Research 2023; 3(1): 100128 doi: 10.1016/j.ahr.2023.100128
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Hugo Sentenac, Adeline Loyau, Joséphine Leflaive, Dirk S. Schmeller. The significance of biofilms to human, animal, plant and ecosystem healthFunctional Ecology 2022; 36(2): 294 doi: 10.1111/1365-2435.13947
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Abdul Malik Tyagi. Mechanism of action of gut microbiota and probiotic Lactobacillus rhamnosus GG on skeletal remodeling in miceEndocrinology, Diabetes & Metabolism 2024; 7(1) doi: 10.1002/edm2.440
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Y. Momose, A. Maruyama, T. Iwasaki, Y. Miyamoto, K. Itoh. 16S rRNA gene sequence-based analysis of clostridia related to conversion of germfree mice to the normal stateJournal of Applied Microbiology 2009; 107(6): 2088 doi: 10.1111/j.1365-2672.2009.04431.x
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Soma Ghosh, Sreemanta Pramanik. Structural diversity, functional aspects and future therapeutic applications of human gut microbiomeArchives of Microbiology 2021; 203(9): 5281 doi: 10.1007/s00203-021-02516-y
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Robin G. Lorenz, Vance J. McCracken, Charles O. Elson. Animal models of intestinal inflammation: ineffective communication between coalition membersSpringer Seminars in Immunopathology 2005; 27(2): 233 doi: 10.1007/s00281-005-0208-4
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Mireia Lopez-Siles, Margarita Martinez-Medina, Romà Surís-Valls, Xavier Aldeguer, Miriam Sabat-Mir, Sylvia H. Duncan, Harry J. Flint, L. Jesús Garcia-Gil. Changes in the Abundance of Faecalibacterium prausnitzii Phylogroups I and II in the Intestinal Mucosa of Inflammatory Bowel Disease and Patients with Colorectal CancerInflammatory Bowel Diseases 2016; 22(1): 28 doi: 10.1097/MIB.0000000000000590
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Alexander Swidsinski, Vera Loening-Baucke, Monika Krüger, Steffen Kirsch. Central Nervous System and the Colonic Bioreactor: Analysis of Colonic Microbiota in Patients with Stroke Unravels Unknown Mechanisms of the Host Defense after Brain InjuryIntestinal Research 2012; 10(4): 332 doi: 10.5217/ir.2012.10.4.332
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Leou Ismael Banla, Adam M. Pickrum, Michael Hayward, Christopher J. Kristich, Nita H. Salzman, Manuela Raffatellu. Sortase-Dependent Proteins Promote Gastrointestinal Colonization by EnterococciInfection and Immunity 2019; 87(5) doi: 10.1128/IAI.00853-18
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Luc Biedermann, Gerhard Rogler. The intestinal microbiota: its role in health and diseaseEuropean Journal of Pediatrics 2015; 174(2): 151 doi: 10.1007/s00431-014-2476-2
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Alexander Swidsinski, Vera Loening‐Baucke. The Human Microbiota2013; : 211 doi: 10.1002/9781118409855.ch9
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Mahmoud Salami. Interplay of Good Bacteria and Central Nervous System: Cognitive Aspects and Mechanistic ConsiderationsFrontiers in Neuroscience 2021; 15 doi: 10.3389/fnins.2021.613120
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Ekaterina G. Semenyuk, Valeriy A. Poroyko, Pehga F. Johnston, Sara E. Jones, Katherine L. Knight, Dale N. Gerding, Adam Driks, V. B. Young. Analysis of Bacterial Communities during Clostridium difficile Infection in the MouseInfection and Immunity 2015; 83(11): 4383 doi: 10.1128/IAI.00145-15
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Malin E V Johansson, Jenny K Gustafsson, Jessica Holmén-Larsson, Karolina S Jabbar, Lijun Xia, Hua Xu, Fayez K Ghishan, Frederic A Carvalho, Andrew T Gewirtz, Henrik Sjövall, Gunnar C Hansson. Bacteria penetrate the normally impenetrable inner colon mucus layer in both murine colitis models and patients with ulcerative colitisGut 2014; 63(2): 281 doi: 10.1136/gutjnl-2012-303207
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Samudra Prosad Banik, Shalini Sehgal, Rituparna Banik Ghosh, Ahana Das. Microbiome, Immunity, Digestive Health and Nutrition2022; : 25 doi: 10.1016/B978-0-12-822238-6.00026-1
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Alexander Zaborin, Monika Krezalek, Sanjiv Hyoju, Jennifer R. Defazio, Namrata Setia, Natalia Belogortseva, Vytautas P. Bindokas, Qiti Guo, Olga Zaborina, John C. Alverdy. Critical role of microbiota within cecal crypts on the regenerative capacity of the intestinal epithelium following surgical stressAmerican Journal of Physiology-Gastrointestinal and Liver Physiology 2017; 312(2): G112 doi: 10.1152/ajpgi.00294.2016
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Michaela Lang, Maximilian Baumgartner, Aleksandra Rożalska, Adrian Frick, Alessandra Riva, Michael Jarek, David Berry, Christoph Gasche. Crypt residing bacteria and proximal colonic carcinogenesis in a mouse model of Lynch syndromeInternational Journal of Cancer 2020; 147(8): 2316 doi: 10.1002/ijc.33028
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