Basic Research
Copyright ©2008 The WJG Press and Baishideng.
World J Gastroenterol. Apr 21, 2008; 14(15): 2349-2357
Published online Apr 21, 2008. doi: 10.3748/wjg.14.2349
Table 1 The number of fenestrae and portal vein pressures in different groups (n = 11)
GroupThe number of fenestraePortal vein pressures (mean ± SD) (cmH2O)
Normal state7.40 ± 1.71d9.32 ± 0.85d
Cirrhotic state2.30 ± 1.1617.92 ± 0.90
Treated group4.60 ± 1.65a15.52 ± 0.93a
Blank group2.10 ± 1.1017.26 ± 1.80
Table 2 Angiogenesis-related genes on the angiogenesis microarray
PositionDescriptionGene Name
1A disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type I motif, 1Adamts1
2Mus musculus a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motAdamts8
3AngiopoietinAngiopoietin 1
4Mus musculus angiopoietin 2 (Agpt2)Angiopoietin2
5AngiogeninANG
6CD36 antigenCD36
7Cadherin 5Cadherin 5
8Chromogranin AChromogranin A
9Procollagen, type XVIII, alpha 1COL18A1
10Colony stimulating factor 3 (granulocyte)G-CSF
11Connective tissue growth factorFisp12
12Endothelial differentiation sphingolipid G-protein-coupled receptor 1Edg1
13Mus musculus ephrin A2 (Efna2)Ephrin A2
14Ephrin A5Ephrin A receptor
15Ephrin B2Ephrin B2
16Epidermal growth factorEGF
17Epidermal growth factor receptorEGFR
18EndoglinEndoglin
19Eph receptor B4Ephrin B4
20V-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)Neu/HER2
21E26 avian leukemia oncogene 1, 5’ domainEts-1
22Mus musculus coagulation factor II (F2)Prothrombin kringle-1
23Fibroblast growth factor 1aFGF
24Fibroblast growth factor 16FGF16
25Fibroblast growth factor 2bFGF
26Fibroblast growth factor 4FGF4
27Fibroblast growth factor 6FGF6
28Fibroblast growth factor 7FGF7/KGF
29Fibroblast growth factor receptor 1FLG
30Fibroblast growth factor receptor 3FGFR3
31Fibroblast growth factor receptor 4FGFR4
32C-fos induced growth factorVEGF-D/FIGF
33Kinase insert domain protein receptorVEGFR2/FLK 1
34FMS-like tyrosine kinase 1VEGFR
35Mouse fibronectin (FN) mRNAFn1
36Chemokine (C-X-C motif) ligand 1Gro1
37Hepatocyte growth factorHGF
38Hypoxia inducible factor 1, alpha subunitHif1a
39Inhibitor of DNA binding 1ID1
40Inhibitor of DNA binding 3ID3
41Interferon alpha family, gene 1IFNA1
42Interferon beta, fibroblastIFN-b1
43Interferon gammaIFN r
44Insulin-like growth factor 1IGF-1
45Interleukin 10IL-10
46Interleukin 12AIL-12A
47Integrin alpha 5 (fibronectin receptor alpha)Integrin a5
48Integrin alpha VCD51
49Integrin beta 3CD61
50MAD homolog 1 (Drosophila)Smad1
51MidkineMidkine
52Matrix metalloproteinase 2Gelatinase A
53Matrix metalloproteinase 9Gelatinase B
54Macrophage scavenger receptor 1SR-A
55Nitric oxide synthase 3, endothelial cellNOS3
56NeuropilinNeuropilin
57Platelet derived growth factor, alphaPDGF a
58Platelet derived growth factor, B polypeptidePDGF b
59Platelet derived growth factor receptor, alpha polypeptidePDGFRa
60Platelet derived growth factor receptor, beta polypeptidePDGFRb
61Platelet/endothelial cell adhesion moleculePECAM1
62Chemokine (C-X-C motif) ligand 4PF4
63Placental growth factorPlacental growth factor
64Plasminogen activator, urokinasePLAU
65Prostaglandin-endoperoxide synthase 1PTGS1
66Prostaglandin-endoperoxide synthase 2Cox-2
67PleiotrophinPTN
68Restin (Reed-Steinberg cell-expressed intermediate filament-associated protein)Restin
69Chemokine (C-C motif) ligand 2Scya2
70Serine (or cysteine) proteinase inhibitor, clade B, member 5Maspin
71Serine (or cysteine) proteinase inhibitor, clade E, member 1PAI-1
72Serine (or cysteine) proteinase inhibitor, clade B, member 2PAI-2
73Serine (or cysteine) proteinase inhibitor, clade F), member 1Pedf
74Secreted acidic cysteine rich glycoproteinBM-40
75Secreted phosphoprotein 1Osteopontin
76Endothelial-specific receptor tyrosine kinaseTie-2
77Transforming growth factor alphaTGF-a
78Transforming growth factor, beta 1TGFb1
79Transforming growth factor, beta 2TGF b2
80Transforming growth factor, beta 3TGF b3
81Transforming growth factor, beta receptor IALK-5
82Transforming growth factor, beta receptor IITGFbR2
83Transforming growth factor, beta receptor IIIBetaglycan
84Thrombospondin 1THBS1
85Thrombospondin 2THBS2
86Mus musculus thrombospondin 3 (Thbs-3)THBS3
87Mus musculus thrombospondin-4 mRNATHBS4
88Tyrosine kinase receptor 1Tie1
89Tissue inhibitor of metalloproteinase 1Timp
90Tissue inhibitor of metalloproteinase 2TIMP2
91Tenascin CTenascin C
92Tumor necrosis factorTNFa
93Vascular cell adhesion molecule 1VCAM-1
94Vascular endothelial growth factor AVEGF/VEGI
95Vascular endothelial growth factor BVEGF-B
96Vascular endothelial growth factor CVEGF-C
Table 3 Relative abundance of transcripts of VEGF and receptor family members
GeneNormal stateCirrhotic stateTreated groupCirrhotic/normalTreated/cirrhotic
VEGF-D/FIGF5.790E-21.337E-22.936E-10.230921.950
VEGF-C 1.700E-11.099E-12.807E-10.64672.5530
VEGF-B8.275E-25.057E-24.079E-10.61118.0650
VEGF/VEGI8.344E-38.914E-42.536E-30.10682.8450
VEGFR2.054E+02.368E+02.237E+01.15300.9448
VEGFR2/FLK11.892E-21.586E-11.338E-18.38000.8438