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For: Deng D, Deng G, Smith MF, Zhou J, Xin H, Powell SM, Lu Y. Simultaneous detection of CpG methylation and single nucleotide polymorphism by denaturing high performance liquid chromatography. Nucleic Acids Res. 2002;30:E13. [PMID: 11809901 DOI: 10.1093/nar/30.3.e13] [Cited by in Crossref: 51] [Cited by in F6Publishing: 56] [Article Influence: 2.4] [Reference Citation Analysis]
Number Citing Articles
1 Ma WR, Xu P, Liu ZJ, Zhou J, Gu LK, Zhang J, Deng DJ. Impact of GFRA1 gene reactivation by DNA demethylation on prognosis of patients with metastatic colon cancer. World J Gastroenterol 2020; 26(2): 184-198 [PMID: 31988584 DOI: 10.3748/wjg.v26.i2.184] [Cited by in CrossRef: 8] [Cited by in F6Publishing: 8] [Article Influence: 2.7] [Reference Citation Analysis]
2 Li P, Gan Y, Qin S, Han X, Cui C, Liu Z, Zhou J, Gu L, Lu ZM, Zhang B, Deng D. DNA hydroxymethylation increases the susceptibility of reactivation of methylated P16 alleles in cancer cells. Epigenetics 2020;15:618-31. [PMID: 31790633 DOI: 10.1080/15592294.2019.1700004] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
3 Liu Z, Lin H, Gan Y, Cui C, Zhang B, Gu L, Zhou J, Zhu G, Deng D. P16 Methylation Leads to Paclitaxel Resistance of Advanced Non-Small Cell Lung Cancer. J Cancer 2019;10:1726-33. [PMID: 31205528 DOI: 10.7150/jca.26482] [Cited by in Crossref: 15] [Cited by in F6Publishing: 17] [Article Influence: 3.8] [Reference Citation Analysis]
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5 Liu H, Liu Z, Liu XW, Xu S, Wang L, Liu Y, Zhou J, Gu L, Gao Y, Liu XY, Shi H, Sun Z, Deng D. A similar effect of P16 hydroxymethylation and true-methylation on the prediction of malignant transformation of oral epithelial dysplasia: observation from a prospective study. BMC Cancer 2018;18:918. [PMID: 30249192 DOI: 10.1186/s12885-018-4787-6] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 1.0] [Reference Citation Analysis]
6 Gan Y, Li P, Han X, Qin S, Cui C, Liu Z, Zhou J, Gu L, Lu Z, Zhang B, Deng D. Hydroxymethylated-P16 Allele Is Transcription-Inactive.. [DOI: 10.1101/405522] [Reference Citation Analysis]
7 Gan Y, Cui C, Xiang S, Zhang B, Deng D. Effects ofP16DNA Methylation on Proliferation, Senescence, and Lifespan of Human Fibroblasts.. [DOI: 10.1101/405407] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.2] [Reference Citation Analysis]
8 Yotani T, Yamada Y, Arai E, Tian Y, Gotoh M, Komiyama M, Fujimoto H, Sakamoto M, Kanai Y. Novel method for DNA methylation analysis using high-performance liquid chromatography and its clinical application. Cancer Sci 2018;109:1690-700. [PMID: 29520901 DOI: 10.1111/cas.13566] [Cited by in Crossref: 13] [Cited by in F6Publishing: 14] [Article Influence: 2.6] [Reference Citation Analysis]
9 Liu Z, Zhou J, Gu L, Deng D. Significant impact of amount of PCR input templates on various PCR-based DNA methylation analysis and countermeasure. Oncotarget. 2016;7:56447-56455. [PMID: 27487147 DOI: 10.18632/oncotarget.10906] [Cited by in Crossref: 7] [Cited by in F6Publishing: 8] [Article Influence: 1.4] [Reference Citation Analysis]
10 Gan Y, Ma W, Wang X, Qiao J, Zhang B, Cui C, Liu Z, Deng D. Coordinated transcription of ANRIL and P16 genes is silenced by P16 DNA methylation. Chin J Cancer Res 2018;30:93-103. [PMID: 29545723 DOI: 10.21147/j.issn.1000-9604.2018.01.10] [Cited by in Crossref: 13] [Cited by in F6Publishing: 16] [Article Influence: 2.6] [Reference Citation Analysis]
11 Zhang B, Zhou J, Liu Z, Gu L, Ji J, Kim WH, Deng D. Clinical and biological significance of a - 73A > C variation in the CDH1 promoter of patients with sporadic gastric carcinoma. Gastric Cancer 2018;21:606-16. [PMID: 29168119 DOI: 10.1007/s10120-017-0778-6] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 0.7] [Reference Citation Analysis]
12 Tost J, Gut I. Molecular Techniques for DNA Methylation Studies. Molecular Diagnostics. Elsevier; 2017. pp. 103-39. [DOI: 10.1016/b978-0-12-802971-8.00007-9] [Cited by in Crossref: 5] [Article Influence: 0.8] [Reference Citation Analysis]
13 Cui C, Gan Y, Gu L, Wilson J, Liu Z, Zhang B, Deng D. P16-specific DNA methylation by engineered zinc finger methyltransferase inactivates gene transcription and promotes cancer metastasis. Genome Biol 2015;16:252. [PMID: 26592237 DOI: 10.1186/s13059-015-0819-6] [Cited by in Crossref: 46] [Cited by in F6Publishing: 52] [Article Influence: 5.8] [Reference Citation Analysis]
14 Cui C, Lu Z, Yang L, Gao Y, Liu W, Gu L, Yang C, Wilson J, Zhang Z, Xing B, Deng D, Sun ZS. Genome-wide identification of differential methylation between primary and recurrent hepatocellular carcinomas: GENOME-WIDE IDENTIFICATION OF DIFFERENTIAL METHYLATION. Mol Carcinog 2016;55:1163-74. [DOI: 10.1002/mc.22359] [Cited by in Crossref: 14] [Cited by in F6Publishing: 14] [Article Influence: 1.8] [Reference Citation Analysis]
15 Zhao H, Lu Z. Detection of DNA methylation by hyperbranched rolling circle amplification and DNA microarray. Chinese Chemical Letters 2014;25:1559-64. [DOI: 10.1016/j.cclet.2014.09.010] [Cited by in Crossref: 10] [Cited by in F6Publishing: 10] [Article Influence: 1.1] [Reference Citation Analysis]
16 Liu Z, Zhang J, Gao Y, Pei L, Zhou J, Gu L, Zhang L, Zhu B, Hattori N, Ji J, Yuasa Y, Kim W, Ushijima T, Shi H, Deng D. Large-scale characterization of DNA methylation changes in human gastric carcinomas with and without metastasis. Clin Cancer Res. 2014;20:4598-4612. [PMID: 25009298 DOI: 10.1158/1078-0432.ccr-13-3380] [Cited by in Crossref: 62] [Cited by in F6Publishing: 65] [Article Influence: 6.9] [Reference Citation Analysis]
17 Yang C, Gu L, Deng D. Distinct susceptibility of induction of methylation of p16ink4a and p19arf CpG islands by X-radiation and chemical carcinogen in mice. Mutation Research/Genetic Toxicology and Environmental Mutagenesis 2014;768:42-50. [DOI: 10.1016/j.mrgentox.2014.04.012] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 0.4] [Reference Citation Analysis]
18 Qin S, Li Q, Zhou J, Liu ZJ, Su N, Wilson J, Lu ZM, Deng D. Homeostatic maintenance of allele-specific p16 methylation in cancer cells accompanied by dynamic focal methylation and hydroxymethylation. PLoS One 2014;9:e97785. [PMID: 24828678 DOI: 10.1371/journal.pone.0097785] [Cited by in Crossref: 10] [Cited by in F6Publishing: 11] [Article Influence: 1.1] [Reference Citation Analysis]
19 Hegde M, Ferber M, Mao R, Samowitz W, Ganguly A; Working Group of the American College of Medical Genetics and Genomics (ACMG) Laboratory Quality Assurance Committee. ACMG technical standards and guidelines for genetic testing for inherited colorectal cancer (Lynch syndrome, familial adenomatous polyposis, and MYH-associated polyposis). Genet Med. 2014;16:101-116. [PMID: 24310308 DOI: 10.1038/gim.2013.166] [Cited by in Crossref: 110] [Cited by in F6Publishing: 124] [Article Influence: 11.0] [Reference Citation Analysis]
20 Deng D, Lu Z. Differentiation and adaptation epigenetic networks: Translational research in gastric carcinogenesis. Chin Sci Bull 2013;58:1-6. [DOI: 10.1007/s11434-012-5578-0] [Cited by in Crossref: 15] [Cited by in F6Publishing: 10] [Article Influence: 1.4] [Reference Citation Analysis]
21 Zhang H, Shan L, Wang X, Ma Q, Fang J. A novel bisulfite-microfluidic temperature gradient capillary electrophoresis platform for highly sensitive detection of gene promoter methylation. Biosens Bioelectron 2013;42:503-11. [PMID: 23246658 DOI: 10.1016/j.bios.2012.10.013] [Cited by in Crossref: 16] [Cited by in F6Publishing: 16] [Article Influence: 1.5] [Reference Citation Analysis]
22 Hutzler M, Geiger E, Jacob F. Use of PCR-DHPLC (Polymerase Chain Reaction-Denaturing High Performance Liquid Chromatography) for the Rapid Differentiation of Industrial Saccharomyces pastorianus and Saccharomyces cerevisiae Strains. Journal of the Institute of Brewing 2010;116:464-74. [DOI: 10.1002/j.2050-0416.2010.tb00798.x] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 0.8] [Reference Citation Analysis]
23 Du Y, Liu Z, Gu L, Zhou J, Zhu BD, Ji J, Deng D. Characterization of human gastric carcinoma-related methylation of 9 miR CpG islands and repression of their expressions in vitro and in vivo. BMC Cancer. 2012;12:249. [PMID: 22703336 DOI: 10.1186/1471-2407-12-249] [Cited by in Crossref: 23] [Cited by in F6Publishing: 26] [Article Influence: 2.1] [Reference Citation Analysis]
24 Mikeska T, Candiloro IL, Dobrovic A. The implications of heterogeneous DNA methylation for the accurate quantification of methylation. Epigenomics 2010;2:561-73. [PMID: 22121974 DOI: 10.2217/epi.10.32] [Cited by in Crossref: 106] [Cited by in F6Publishing: 115] [Article Influence: 9.6] [Reference Citation Analysis]
25 Rodríguez JL, Pascual J, Viejo M, Valledor L, Meijón M, Hasbún R, Yrei NY, Santamaría ME, Pérez M, Fraga MF, Berdasco M, Fernández RR, Cañal MJ. Basic Procedures for Epigenetic Analysis in Plant Cell and Tissue Culture. In: Loyola-vargas VM, Ochoa-alejo N, editors. Plant Cell Culture Protocols. Totowa: Humana Press; 2012. pp. 325-41. [DOI: 10.1007/978-1-61779-818-4_25] [Cited by in Crossref: 4] [Article Influence: 0.4] [Reference Citation Analysis]
26 Tost J, Gut IG. DNA Methylation Analysis by MALDI Mass Spectrometry. In: Meyers RA, editor. Encyclopedia of Molecular Cell Biology and Molecular Medicine. Weinheim: Wiley-VCH Verlag GmbH & Co. KGaA; 2006. [DOI: 10.1002/3527600906.mcb.201100025] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.3] [Reference Citation Analysis]
27 Sun L, Cao D, Yang J, Li H, Zhou X, Song Z, Cheng X, Chen J, Shen K. Population-based case–control study on DAPK1, RAR-β2 and MGMT methylation in liquid-based cytology. Arch Gynecol Obstet 2012;285:1433-9. [DOI: 10.1007/s00404-011-2149-6] [Cited by in Crossref: 13] [Cited by in F6Publishing: 13] [Article Influence: 1.1] [Reference Citation Analysis]
28 Ming S, Gao J, Sun T. [The relationship between the TSLC1 silencing and DNA methylation in human lung cancer cells]. Zhongguo Fei Ai Za Zhi 2010;13:464-9. [PMID: 20677643 DOI: 10.3779/j.issn.1009-3419.2010.05.16] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
29 Wen XZ, Akiyama Y, Pan KF, Liu ZJ, Lu ZM, Zhou J, Gu LK, Dong CX, Zhu BD, Ji JF, You WC, Deng DJ. Methylation of GATA-4 and GATA-5 and development of sporadic gastric carcinomas. World J Gastroenterol 2010; 16(10): 1201-1208 [PMID: 20222162 DOI: 10.3748/wjg.v16.i10.1201] [Cited by in CrossRef: 39] [Cited by in F6Publishing: 45] [Article Influence: 3.0] [Reference Citation Analysis]
30 Xiang S, Liu Z, Zhang B, Zhou J, Zhu BD, Ji J, Deng D. Methylation status of individual CpG sites within Alu elements in the human genome and Alu hypomethylation in gastric carcinomas. BMC Cancer 2010;10:44. [PMID: 20163738 DOI: 10.1186/1471-2407-10-44] [Cited by in Crossref: 21] [Cited by in F6Publishing: 26] [Article Influence: 1.6] [Reference Citation Analysis]
31 Tost J, Gut IG. Molecular Techniques for DNA Methylation Studies. Molecular Diagnostics. Elsevier; 2010. pp. 199-228. [DOI: 10.1016/b978-0-12-374537-8.00014-6] [Cited by in Crossref: 1] [Article Influence: 0.1] [Reference Citation Analysis]
32 Pal T, Wey JP, Sellers TA. Genetic Epidemiology of Mismatch Repair Deficiency in Ovarian Cancer. Environmental Factors, Genes, and the Development of Human Cancers 2010. [DOI: 10.1007/978-1-4419-6752-7_14] [Reference Citation Analysis]
33 Gao J, Chen T, Liu J, Liu W, Hu G, Guo X, Yin B, Gong Y, Zhao J, Qiang B, Yuan J, Peng X. Loss of NECL1, a novel tumor suppressor, can be restored in glioma by HDAC inhibitor-Trichostatin A through Sp1 binding site. Glia 2009;57:989-99. [PMID: 19062177 DOI: 10.1002/glia.20823] [Cited by in Crossref: 28] [Cited by in F6Publishing: 29] [Article Influence: 2.0] [Reference Citation Analysis]
34 Mei M, Deng D, Liu TH, Sang XT, Lu X, Xiang HD, Zhou J, Wu H, Yang Y, Chen J. Clinical implications of microsatellite instability and MLH1 gene inactivation in sporadic insulinomas. J Clin Endocrinol Metab. 2009;94:3448-3457. [PMID: 19567531 DOI: 10.1210/jc.2009-0173] [Cited by in Crossref: 38] [Cited by in F6Publishing: 40] [Article Influence: 2.7] [Reference Citation Analysis]
35 Sepulveda AR, Jones D, Ogino S, Samowitz W, Gulley ML, Edwards R, Levenson V, Pratt VM, Yang B, Nafa K. CpG methylation analysis--current status of clinical assays and potential applications in molecular diagnostics: a report of the Association for Molecular Pathology. J Mol Diagn. 2009;11:266-278. [PMID: 19541921 DOI: 10.2353/jmoldx.2009.080125] [Cited by in Crossref: 38] [Cited by in F6Publishing: 40] [Article Influence: 2.7] [Reference Citation Analysis]
36 Hung CC, Lin SY, Lin SP, Niu DM, Lee NC, Cheng WF, Chen CP, Lin WL, Lee CN, Su YN. Identification of CpG methylation of the SNRPN gene by methylation-specific multiplex PCR. Electrophoresis 2009;30:410-6. [PMID: 19137525 DOI: 10.1002/elps.200800225] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 0.4] [Reference Citation Analysis]
37 Chou L, Lyon E, Mao R. Molecular diagnosis utility of multiplex ligation-dependent probe amplification. Expert Opinion on Medical Diagnostics 2008;2:373-85. [DOI: 10.1517/17530059.2.4.373] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 0.3] [Reference Citation Analysis]
38 Hattermann K, Mehdorn HM, Mentlein R, Schultka S, Held-Feindt J. A methylation-specific and SYBR-green-based quantitative polymerase chain reaction technique for O6-methylguanine DNA methyltransferase promoter methylation analysis. Anal Biochem. 2008;377:62-71. [PMID: 18384736 DOI: 10.1016/j.ab.2008.03.014] [Cited by in Crossref: 46] [Cited by in F6Publishing: 48] [Article Influence: 3.1] [Reference Citation Analysis]
39 Dikow N, Nygren AO, Schouten JP, Hartmann C, Krämer N, Janssen B, Zschocke J. Quantification of the methylation status of the PWS/AS imprinted region: Comparison of two approaches based on bisulfite sequencing and methylation-sensitive MLPA. Molecular and Cellular Probes 2007;21:208-15. [DOI: 10.1016/j.mcp.2006.12.002] [Cited by in Crossref: 49] [Cited by in F6Publishing: 37] [Article Influence: 3.1] [Reference Citation Analysis]
40 Edelman EJ, Maksimova Y, Duru F, Altay C, Gallagher PG. A complex splicing defect associated with homozygous ankyrin-deficient hereditary spherocytosis. Blood 2007;109:5491-3. [PMID: 17327413 DOI: 10.1182/blood-2006-09-046573] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 0.6] [Reference Citation Analysis]
41 Deligezer U, Esin Akisik E, Dalay N. A novel application of melting curves: utility of peak area calculation for relative methylation quantification. Clinical Chemical Laboratory Medicine 2007;45. [DOI: 10.1515/cclm.2007.146] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 0.4] [Reference Citation Analysis]
42 Judson H, Stewart A, Leslie A, Pratt NR, Baty DU, Steele RJ, Carey FA. Relationship between point gene mutation, chromosomal abnormality, and tumour suppressor gene methylation status in colorectal adenomas. J Pathol 2006;210:344-50. [PMID: 16902913 DOI: 10.1002/path.2044] [Cited by in Crossref: 18] [Cited by in F6Publishing: 18] [Article Influence: 1.1] [Reference Citation Analysis]
43 Ogino S, Kawasaki T, Brahmandam M, Cantor M, Kirkner GJ, Spiegelman D, Makrigiorgos GM, Weisenberger DJ, Laird PW, Loda M. Precision and performance characteristics of bisulfite conversion and real-time PCR (MethyLight) for quantitative DNA methylation analysis. J Mol Diagn. 2006;8:209-217. [PMID: 16645207 DOI: 10.2353/jmoldx.2006.050135] [Cited by in Crossref: 316] [Cited by in F6Publishing: 347] [Article Influence: 18.6] [Reference Citation Analysis]
44 Luo D, Zhang B, Lv L, Xiang S, Liu Y, Ji J, Deng D. Methylation of CpG islands of p16 associated with progression of primary gastric carcinomas. Lab Invest 2006;86:591-8. [DOI: 10.1038/labinvest.3700415] [Cited by in Crossref: 44] [Cited by in F6Publishing: 49] [Article Influence: 2.6] [Reference Citation Analysis]
45 Nygren AO, Ameziane N, Duarte HM, Vijzelaar RN, Waisfisz Q, Hess CJ, Schouten JP, Errami A. Methylation-specific MLPA (MS-MLPA): simultaneous detection of CpG methylation and copy number changes of up to 40 sequences. Nucleic Acids Res. 2005;33:e128. [PMID: 16106041 DOI: 10.1093/nar/gni127] [Cited by in Crossref: 275] [Cited by in F6Publishing: 289] [Article Influence: 15.3] [Reference Citation Analysis]
46 Shen J, Zhang JZ, Ke Y, Deng D. Formation of A2143G mutation of 23S rRNA in progression of clarithromycin resistance in Helicobacter pylori 26695. Microb Drug Resist. 2005;11:100-106. [PMID: 15910222 DOI: 10.1089/mdr.2005.11.100] [Cited by in Crossref: 4] [Cited by in F6Publishing: 5] [Article Influence: 0.2] [Reference Citation Analysis]
47 Gao L, Cheng L, Zhou J, Zhu B, Lu Z. DNA microarray: a high throughput approach for methylation detection. Colloids and Surfaces B: Biointerfaces 2005;40:127-31. [DOI: 10.1016/j.colsurfb.2004.10.024] [Cited by in Crossref: 13] [Cited by in F6Publishing: 11] [Article Influence: 0.7] [Reference Citation Analysis]
48 Simmons DL, Botting RM, Hla T. Cyclooxygenase Isozymes: The Biology of Prostaglandin Synthesis and Inhibition. Pharmacol Rev 2004;56:387-437. [DOI: 10.1124/pr.56.3.3] [Cited by in Crossref: 1171] [Cited by in F6Publishing: 1204] [Article Influence: 61.6] [Reference Citation Analysis]
49 Liu ZJ, Maekawa M. Polymerase chain reaction-based methods of DNA methylation analysis. Anal Biochem 2003;317:259-65. [PMID: 12758266 DOI: 10.1016/s0003-2697(03)00169-6] [Cited by in Crossref: 31] [Cited by in F6Publishing: 32] [Article Influence: 1.6] [Reference Citation Analysis]
50 Yue CM, Deng DJ, Bi MX, Guo LP, Lu SH. Expression of ECRG4, a novel esophageal cancer-related gene, downregulated by CpG island hypermethylation in human esophageal squamous cell carcinoma. World J Gastroenterol 2003; 9(6): 1174-1178 [PMID: 12800218 DOI: 10.3748/wjg.v9.i6.1174] [Cited by in CrossRef: 55] [Cited by in F6Publishing: 61] [Article Influence: 2.8] [Reference Citation Analysis]
51 Bai H, Gu L, Zhou J, Deng D. p16 hypermethylation during gastric carcinogenesis of Wistar rats by N-methyl-N'-nitro-N-nitrosoguanidine. Mutat Res. 2003;535:73-78. [PMID: 12547284 DOI: 10.1016/S1383-5718(02)00288-7] [Cited by in Crossref: 21] [Cited by in F6Publishing: 22] [Article Influence: 1.1] [Reference Citation Analysis]
52 Frueh FW, Noyer-weidner M. The Use of Denaturing High-Performance Liquid Chromatography (DHPLC) for the Analysis of Genetic Variations: Impact for Diagnostics and Pharmacogenetics. Clinical Chemistry and Laboratory Medicine 2003;41. [DOI: 10.1515/cclm.2003.068] [Cited by in Crossref: 51] [Cited by in F6Publishing: 56] [Article Influence: 2.6] [Reference Citation Analysis]
53 Deng DJ, Zhou J, Zhu BD, Ji JF, Harper JC, Powell SM. Silencing-specific methylation and single nucleotide polymorphism of hMLH1 promoter in gastric carcinomas. World J Gastroenterol 2003; 9(1): 26-29 [PMID: 12508345 DOI: 10.3748/wjg.v9.i1.26] [Cited by in CrossRef: 10] [Cited by in F6Publishing: 11] [Article Influence: 0.5] [Reference Citation Analysis]