Identification and prediction of novel non-coding and coding RNA-associated competing endogenous RNA networks in colorectal cancer

doi:10.3748/wjg.v24.i46.5259

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Dec 14, 2018; 24(46): 5259-5270
Published online Dec 14, 2018. doi: 10.3748/wjg.v24.i46.5259

Table 3 Top 10 Kyoto Encyclopedia of Genes and Genomes pathways enriched by the differentially expressed mRNAs involved in competing endogenous RNAs networks

Pathway ID	Description	P value	Gene name
hsa05210	Colorectal cancer	8.18E-05	TCF7, CCND1, TGFB2
hsa04115	p53 signaling pathway	1.11E-04	SERPINE1, CCND1
hsa05220	Chronic myeloid leukemia	1.30E-04	CCND1, CBL, TGFB2
hsa05205	Proteoglycans in cancer	1.52E-04	CCND1, CBL, TGFB2, PLAU
hsa05206	MicroRNAs in cancer	6.20E-04	ZEB1, CCND1, PLAU, TGFB2
hsa05216	Thyroid cancer	7.31E-04	TCF7, CCND1
hsa04550	Signaling pathways regulating pluripotency of stem cells	8.67E-04	SOX2, KLF4, HAND1
hsa04310	Wnt signaling pathway	8.84E-04	TCF7, CCND1, SFRP1
hsa05202	Transcriptional misregulation in cancer	1.69E-03	SP1, PLAU, ZEB1
hsa05200	Pathways in cancer	1.74E-03	TCF7, CCND1, CBL, TGFB2

Citation: Liang Y, Zhang C, Ma MH, Dai DQ. Identification and prediction of novel non-coding and coding RNA-associated competing endogenous RNA networks in colorectal cancer. World J Gastroenterol 2018; 24(46): 5259-5270
URL: https://www.wjgnet.com/1007-9327/full/v24/i46/5259.htm
DOI: https://dx.doi.org/10.3748/wjg.v24.i46.5259