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Lau RI, Su Q, Ng SC. Long COVID and gut microbiome: insights into pathogenesis and therapeutics. Gut Microbes 2025; 17:2457495. [PMID: 39854158 PMCID: PMC11776476 DOI: 10.1080/19490976.2025.2457495] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/26/2024] [Revised: 01/15/2025] [Accepted: 01/17/2025] [Indexed: 01/26/2025] Open
Abstract
Post-acute coronavirus disease 2019 syndrome (PACS), following severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection or coronavirus disease 2019 (COVID-19), is typically characterized by long-term debilitating symptoms affecting multiple organs and systems. Unfortunately, there is currently a lack of effective treatment strategies. Altered gut microbiome has been proposed as one of the plausible mechanisms involved in the pathogenesis of PACS; extensive studies have emerged to bridge the gap between the persistent symptoms and the dysbiosis of gut microbiome. Recent clinical trials have indicated that gut microbiome modulation using probiotics, prebiotics, and fecal microbiota transplantation (FMT) led to improvements in multiple symptoms related to PACS, including fatigue, memory loss, difficulty in concentration, gastrointestinal upset, and disturbances in sleep and mood. In this review, we highlight the latest evidence on the key microbial alterations observed in PACS, as well as the use of microbiome-based therapeutics in managing PACS symptoms. These novel findings altogether shed light on the treatment of PACS and other chronic conditions.
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Affiliation(s)
- Raphaela I. Lau
- Department of Medicine and Therapeutics, Faculty of Medicine, The Chinese University of Hong Kong, Hong KongSAR, China
- Microbiota I-Center (MagIC), Hong KongSAR, China
| | - Qi Su
- Department of Medicine and Therapeutics, Faculty of Medicine, The Chinese University of Hong Kong, Hong KongSAR, China
- Microbiota I-Center (MagIC), Hong KongSAR, China
| | - Siew C. Ng
- Department of Medicine and Therapeutics, Faculty of Medicine, The Chinese University of Hong Kong, Hong KongSAR, China
- Microbiota I-Center (MagIC), Hong KongSAR, China
- Li Ka Shing Institute of Health Sciences, State Key Laboratory of Digestive Disease, Institute of Digestive Disease, The Chinese University of Hong Kong, Hong KongSAR, China
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Peconi C, Martini E, Sarti D, Prospero E. Impact of the COVID-19 pandemic on healthcare-associated infections and multidrug-resistant microorganisms in Italy: A systematic review. J Infect Public Health 2025; 18:102729. [PMID: 40056892 DOI: 10.1016/j.jiph.2025.102729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2024] [Revised: 02/03/2025] [Accepted: 02/27/2025] [Indexed: 03/10/2025] Open
Abstract
BACKGROUND The diffused and prolonged SARS-CoV-2 transmission lead to high levels of hospitalization. During this period, the focus of sanitary structures was to contain COVID-19 mortality and this may have reduced the application of health associated infection (HAI) and multidrug resistant microorganism (MDRO) prevention programs. METHODS A search was performed in PubMed, Science Direct, and Google Scholar databases to identify clinical observational studies that reported the impact of COVID-19 pandemic on the prevalence or incidence on HAIs and/or MDROs from December 2019 to August 2024 in Italy. Studies were included if they reported a comparison with pre-pandemic period and had a full-text available. Eligible studies were assessed for risk of bias and quality with NHI Quality Assessment Tool by two researchers independently. Data were represented in tables and a narrative synthesis was made in the text. RESULTS Selected studies included 4 studies reporting data on HAI (1497 total patients) and 11 studies reporting data on MDRO (80388 total patients). The majority of the studies reported an increase in HAI prevalence (9-11.1 % range) and MDRO, in particular, gram negative MDRO had an increase range of 0.8 %-45.6 % and gram positive MDRO an increase range of 0.5 %-81.8 % from pre- to post-COVID-19 period in the different studies considered CONCLUSION: These findings underscore the critical need for active surveillance in hospital wards, the implementation of antibiotic stewardship and prescribing programs to mitigate the impact of such crises on healthcare-associated infections and antimicrobial resistance. Furthermore, permanent training of healthcare personnel is necessary.
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Affiliation(s)
- Chiara Peconi
- Department of Biomedical Sciences and Public Health, Università Politecnica delle Marche, Ancona, Italy
| | - Enrica Martini
- Hospital Hygiene Unit, Azienda Ospedaliero-Universitaria delle Marche, Ancona, Italy
| | - Donatella Sarti
- Department of Biomedical Sciences and Public Health, Università Politecnica delle Marche, Ancona, Italy.
| | - Emilia Prospero
- Department of Biomedical Sciences and Public Health, Università Politecnica delle Marche, Ancona, Italy; Hospital Hygiene Unit, Azienda Ospedaliero-Universitaria delle Marche, Ancona, Italy
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3
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Yek C, Mancera AG, Diao G, Walker M, Neupane M, Chishti EA, Amirahmadi R, Richert ME, Rhee C, Klompas M, Swihart B, Warner SR, Kadri SS. Impact of the COVID-19 Pandemic on Antibiotic Resistant Infection Burden in U.S. Hospitals : Retrospective Cohort Study of Trends and Risk Factors. Ann Intern Med 2025. [PMID: 40294418 DOI: 10.7326/annals-24-03078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 04/30/2025] Open
Abstract
BACKGROUND In 2022, the U.S. Centers for Disease Control and Prevention reported increases in antimicrobial resistance (AMR) across U.S. hospitals during the COVID-19 pandemic. The key drivers and lasting effects of this phenomenon remain unexplored. OBJECTIVE To determine the incidence of AMR infections in U.S. hospitals during and beyond the pandemic and identify factors contributing to AMR. DESIGN Retrospective cohort study. SETTING 243 U.S. hospitals. PARTICIPANTS Adult hospitalizations, excluding inpatient transfers. INTERVENTION Prepandemic (January 2018 to December 2019), peak pandemic (March 2020 to February 2022), and waning pandemic (March to December 2022). MEASUREMENTS Incidence of methicillin-resistant Staphylococcus aureus; vancomycin-resistant Enterococci; extended-spectrum cephalosporin-resistant Enterobacterales; and carbapenem-resistant Enterobacterales, Acinetobacter baumannii, and Pseudomonas aeruginosa infections was evaluated among 120 continuously reporting hospitals. Infections detected more than 3 days after admission were classified as hospital-onset. Antibiotic exposure was estimated using a duration- and spectrum-weighted index. A competing risks analysis was done in 243 hospitals to identify risk factors for resistance. RESULTS During the peak of the COVID-19 pandemic, AMR infections increased from 182 to 193 per 10 000 hospitalizations (6.5% [95% CI, 5.1% to 8.0%]). Hospital-onset AMR infections increased from 28.9 to 38.0 per 10 000 hospitalizations (31.5% [CI, 27.3% to 35.8%]). Factors associated with hospital-onset AMR included illness severity (intensive care unit admission, mechanical ventilation, vasopressors, COVID-19 diagnosis), comorbidities (Elixhauser Comorbidity Index), and prior exposure to antibiotics, but not hospital factors. Prevalence of AMR returned to prepandemic levels as the pandemic waned (182 to 182 per 10 000 hospitalizations; 0.4% [CI, -1.4% to 2.2%]), however, hospital-onset AMR remained above baseline (28.9 to 32.3 per 10 000 hospitalizations; 11.6% [CI, 6.8% to 16.7%]). LIMITATION Residual confounding; unknown appropriateness of antibiotics. CONCLUSION Sustained increases in hospital-onset AMR infections occurred in U.S. hospitals during the pandemic and were strongly associated with antibiotic exposure. PRIMARY FUNDING SOURCE National Institutes of Health Clinical Center; National Heart, Lung, and Blood Institute; and National Institute of Allergy and Infectious Diseases Intramural Research Programs.
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Affiliation(s)
- Christina Yek
- Critical Care Medicine Department, National Institutes of Health Clinical Center, Bethesda, Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, and Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, Rockville, Maryland (C.Y.)
| | - Alex G Mancera
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Guoqing Diao
- Department of Biostatistics and Bioinformatics, George Washington University, Washington, DC (G.D.)
| | - Morgan Walker
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Maniraj Neupane
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Emad A Chishti
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Roxana Amirahmadi
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Mary E Richert
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Chanu Rhee
- Department of Population Medicine, Harvard Medical School/Harvard Pilgrim Health Care Institute, and Division of Infectious Diseases, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts (C.R., M.K.)
| | - Michael Klompas
- Department of Population Medicine, Harvard Medical School/Harvard Pilgrim Health Care Institute, and Division of Infectious Diseases, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts (C.R., M.K.)
| | - Bruce Swihart
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Sarah R Warner
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
| | - Sameer S Kadri
- Critical Care Medicine Department, National Institutes of Health Clinical Center, and Critical Care Medicine Branch, National Heart, Lung, and Blood Institute, Bethesda, Maryland (A.G.M., M.W., M.N., E.A.C., R.A., M.E.R., B.S., S.R.W., S.S.K.)
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Li W, Huang T, Liu C, Wushouer H, Yang X, Wang R, Xia H, Li X, Qiu S, Chen S, Ho HC, Huang C, Shi L, Guan X, Tian G, Liu G, Ebi KL, Yang L. Changing climate and socioeconomic factors contribute to global antimicrobial resistance. Nat Med 2025:10.1038/s41591-025-03629-3. [PMID: 40295742 DOI: 10.1038/s41591-025-03629-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2024] [Accepted: 03/04/2025] [Indexed: 04/30/2025]
Abstract
Climate change poses substantial challenges in containing antimicrobial resistance (AMR) from a One Health perspective. Using 4,502 AMR surveillance records involving 32 million tested isolates from 101 countries (1999-2022), we analyzed the impact of socioeconomic and environmental factors on AMR. We also established forecast models based on several scenarios, considering antimicrobial consumption reduction, sustainable development initiatives and different shared socioeconomic pathways under climate change. Our findings reveal growing AMR disparities between high-income countries and low- and middle-income countries under different shared socioeconomic pathway scenarios. By 2050, compared with the baseline, sustainable development efforts showed the most prominent effect by reducing AMR prevalence by 5.1% (95% confidence interval (CI): 0.0-26.6%), surpassing the effect of antimicrobial consumption reduction. Key contributors include reducing out-of-pocket health expenses (3.6% (95% CI: -0.5 to 21.4%)); comprehensive immunization coverage (1.2% (95% CI: -0.1% to 8.2%)); adequate health investments (0.2% (95% CI: 0.0-2.4%)) and universal access to water, sanitation and hygiene services (0.1% (95% CI: 0.0-0.4%)). These findings highlight the importance of sustainable development strategies as the most effective approach to help low- and middle-income countries address the dual challenges of climate change and AMR.
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Affiliation(s)
- Weibin Li
- School of Public Health, Sun Yat-sen University, Guangzhou, China
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmaceutical Sciences, Peking University, Beijing, China
| | - Tingting Huang
- Laboratory of Cloud-Precipitation Physics and Severe Storms, Institute of Atmospheric Physics, Chinese Academy of Sciences, Beijing, China
| | - Chaojie Liu
- School of Psychology and Public Health, La Trobe University, Melbourne, Victoria, Australia
| | - Haishaerjiang Wushouer
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmaceutical Sciences, Peking University, Beijing, China
- International Research Center for Medicinal Administration, Peking University, Beijing, China
| | - Xinyi Yang
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Ruonan Wang
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Haohai Xia
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Xiying Li
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Shengyue Qiu
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Shanquan Chen
- Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK
| | - Hung Chak Ho
- Department of Public and International Affairs, City University of Hong Kong, Hong Kong SAR, China
| | - Cunrui Huang
- Vanke School of Public Health, Tsinghua University, Beijing, China
| | - Luwen Shi
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmaceutical Sciences, Peking University, Beijing, China
- International Research Center for Medicinal Administration, Peking University, Beijing, China
| | - Xiaodong Guan
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmaceutical Sciences, Peking University, Beijing, China
- International Research Center for Medicinal Administration, Peking University, Beijing, China
| | - Guobao Tian
- School of Medicine, Sun Yat-sen University, Shenzhen, China
| | - Gordon Liu
- National School of Development, Peking University, Beijing, China
- Institute for Global Health and Development, Peking University, Beijing, China
| | - Kristie L Ebi
- Center for Health and the Global Environment, University of Washington, Seattle, WA, USA
| | - Lianping Yang
- School of Public Health, Sun Yat-sen University, Guangzhou, China.
- Institute for Global Health and Development, Peking University, Beijing, China.
- Sun Yat-sen Global Health Institute, Institute of State Governance, Sun Yat-sen University, Guangzhou, China.
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5
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Van Phan H, Spottiswoode N, Lydon EC, Chu VT, Cuesta A, Kazberouk AD, Richmond NL, Deosthale P, Calfee CS, Langelier CR. Integrating a host transcriptomic biomarker with a large language model for diagnosis of lower respiratory tract infection. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2025:2024.08.28.24312732. [PMID: 40236397 PMCID: PMC11998817 DOI: 10.1101/2024.08.28.24312732] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 04/17/2025]
Abstract
BACKGROUND Lower respiratory tract infections (LRTIs) are a leading cause of mortality worldwide and can be difficult to diagnose in critically ill patients, as non-infectious causes of respiratory failure can present with similar clinical features. METHODS We developed a LRTI diagnostic method combining the pulmonary transcriptomic biomarker FABP4 with electronic medical record (EMR) text assessment using the large language model Generative Pre-trained Transformer 4 (GPT-4). We evaluated this approach in a prospective cohort of critically ill adults with acute respiratory failure from whom tracheal aspirate FABP4 expression was measured by RNA sequencing. Patients with LRTI or non-infectious conditions were identified using retrospective, multi-physician clinical adjudication. We then confirmed our findings by applying this method to an independent validation cohort of 115 adults with acute respiratory failure. RESULTS In the derivation cohort, a combined classifier incorporating FABP4 expression and GPT-4-assisted EMR analysis achieved an AUC of 0.93 (±0.08) and an accuracy of 84%, outperforming FABP4 expression alone (AUC 0.84 ± 0.11) and GPT-4-based analysis alone (AUC 0.83 ± 0.07). By comparison, the primary medical team's admission diagnosis had an accuracy of 72%. In the validation cohort, the combined classifier yielded an AUC of 0.98 (±0.04) and an accuracy of 96%. CONCLUSIONS Integrating a host transcriptional biomarker with EMR text analysis using a large language model may offer a promising new approach to improving the diagnosis of LRTIs in critically ill adults.
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Affiliation(s)
- Hoang Van Phan
- Department of Medicine, Division of Infectious Diseases, University of California San Francisco
| | - Natasha Spottiswoode
- Department of Medicine, Division of Infectious Diseases, University of California San Francisco
| | - Emily C. Lydon
- Department of Medicine, Division of Infectious Diseases, University of California San Francisco
| | - Victoria T. Chu
- Department of Pediatrics, Division of Infectious Diseases and Global Health, University of California San Francisco
- Chan Zuckerberg Biohub San Francisco
| | - Adolfo Cuesta
- Department of Medicine, Division of Infectious Diseases, University of California San Francisco
| | | | - Natalie L. Richmond
- Department of Medicine, Division of Infectious Diseases, University of California San Francisco
| | - Padmini Deosthale
- Department of Medicine, Division of Infectious Diseases, University of California San Francisco
| | - Carolyn S. Calfee
- Department of Medicine, Division of Pulmonary, Critical Care, Allergy and Sleep Medicine, University of California San Francisco
| | - Charles R. Langelier
- Department of Medicine, Division of Infectious Diseases, University of California San Francisco
- Chan Zuckerberg Biohub San Francisco
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6
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Maruyama K, Sekiya K, Yanagida N, Yasuda S, Fukumoto D, Hosoya S, Moriya H, Takahashi K, Komatsu T. Seasonal variation in intravenous broad-spectrum antimicrobial use in Japan from 2018 to 2023. J Infect Chemother 2025; 31:102636. [PMID: 39892511 DOI: 10.1016/j.jiac.2025.102636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2024] [Revised: 01/15/2025] [Accepted: 01/28/2025] [Indexed: 02/03/2025]
Abstract
BACKGROUND To date, no studies have specifically addressed seasonal variation in the use of intravenous broad-spectrum antimicrobials. This study aimed to examine the seasonal patterns of the use of intravenous broad-spectrum antimicrobials by utilizing a nationwide Japanese infection control surveillance database. METHODS This retrospective cohort study extracted the days of therapy (DOT) for intravenous broad-spectrum antimicrobials and the detection rates of drug-resistant bacteria from the database between 2018 and 2023. Seasonal variation was analyzed using these values through seasonal and trend decomposition using loess. RESULTS The DOT for carbapenems, tazobactam/piperacillin, fourth-generation cephalosporins, and fluoroquinolones showed seasonal variation, peaking in fall. Conversely, no significant seasonal variation was observed in the DOT for anti-methicillin-resistant Staphylococcus aureus (MRSA) agents. The detection rates of Pseudomonas aeruginosa, Klebsiella aerogenes, and Enterobacter cloacae exhibited seasonal variation and peaked in fall. The detection rates of Enterococcus faecium exhibited seasonal variation as well, though no distinct peaks were observed. There was no significant seasonal variation in the detection rates of third-generation cephalosporin-resistant Escherichia coli or MRSA. CONCLUSION The findings of this study indicate seasonal variation in the use of intravenous broad-spectrum antimicrobials. This seasonality was likely influenced by various factors, including the detection rates of drug-resistant bacteria. The study underscores the importance of appropriate antimicrobial stewardship and interventions against drug-resistant organisms, particularly during fall.
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Affiliation(s)
- Kohei Maruyama
- Division of Antimicrobial Stewardship Program, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan; Department of Pharmacy, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan.
| | - Kiyoshi Sekiya
- Division of Antimicrobial Stewardship Program, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan; Department of Allergy and Respirology, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan
| | - Noriyuki Yanagida
- Division of Antimicrobial Stewardship Program, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan; Department of Pediatrics, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan
| | - Shuhei Yasuda
- Division of Antimicrobial Stewardship Program, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan; Department of Clinical Laboratory, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan
| | - Daisuke Fukumoto
- Division of Antimicrobial Stewardship Program, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan; Department of Nursing, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan
| | - Satoshi Hosoya
- Division of Antimicrobial Stewardship Program, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan; Department of Emergency and Critical Care Medicine, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan
| | - Hiromitsu Moriya
- Division of Antimicrobial Stewardship Program, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan; Department of Surgery, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan
| | - Kyohei Takahashi
- Department of Pediatrics, NHO Sagamihara National Hospital, Sagamihara, Kanagawa, Japan
| | - Toshiaki Komatsu
- Department of Pharmacy, Kitasato University Hospital, Sagamihara, Kanagawa, Japan
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Jiang T, Zhu X, Yin Z, Gao R, Li Y, Li C, Meng Q, Zhu X, Song W, Su X. Dual role of Baimao-Longdan-Congrong-Fang in inhibiting Staphylococcus aureus virulence factors and regulating TNF-α/TNFR1/NF-κB/MMP9 axis. PHYTOMEDICINE : INTERNATIONAL JOURNAL OF PHYTOTHERAPY AND PHYTOPHARMACOLOGY 2025; 139:156477. [PMID: 39938176 DOI: 10.1016/j.phymed.2025.156477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2024] [Revised: 02/01/2025] [Accepted: 02/04/2025] [Indexed: 02/14/2025]
Abstract
BACKGROUND Baimao-Longdan-Congrong-Fang (BLCF), a traditional Chinese herbal formula described in the Taiping Shenghui Fang (998 AD), consists of medicinal plants with heat-clearing and tonifying properties. BLCF has a promise as a treatment for Staphylococcus aureus (S. aureus) pneumonia, according to its historical use and current pharmacological research. PURPOSE In this study, the inhibitory effects of BLCF on S. aureus virulence factors were evaluated in vitro, and its mechanisms of action were investigated in a methicillin-resistant S. aureus (MRSA) pneumonia mouse model. METHODS The inhibitory effect of BLCF on S. aureus virulence factors, including sortase A (SrtA) and α-hemolysin (Hla), was investigated by fluorescence resonance energy transfer (FRET) and hemolysis assays. A C57BL/6J mouse model of MRSA pneumonia was employed to evaluate its therapeutic efficacy. Accordingly, an integrated strategy of medicinal chemistry, network pharmacology analysis, GEO database analysis, bioinformatics, molecular docking, molecular dynamics simulation, GeneMANIA-based functional association (GMFA), and GSEA was used to identify and illustrate potential therapeutic targets and mechanisms. Subsequently, the mechanistic results were confirmed by Western blot analysis and RT-qPCR. RESULTS While BLCF exhibited weak inhibitory activity against S. aureus USA300, Newman, and SA37 strains, it significantly suppressed SrtA-related virulence functions without affecting bacterial growth. FRET and hemolysis assays confirmed that BLCF inhibited SrtA activity (IC50 = 1.25 mg/mL) while decreasing hemolytic activity. Furthermore, BLCF protected mice from MRSA infection, increasing their survival rates. Bioinformatics analysis identified 26 active compounds and 2 hub genes (Tnf and Mmp9) that were associated with 5 types of immune cell, including activated CD4 T cells, myeloid-derived suppressor cells, activated dendritic cells, macrophages, and mast cells. Molecular docking revealed 3 active compounds (isoacteoside, verbascoside, and echinacoside) that exhibited strong binding affinities to TNF, MMP9, and SrtA. Molecular dynamics simulations validated the stable interactions between isoacteoside and the target proteins, yielding binding energies of -136.76 ± 8.83 kJ/mol, -174.98 ± 14.89 kJ/mol, and -186.34 ± 9.06 kJ/mol, respectively. The therapeutic effect of BLCF was closely linked to the NF-κB signaling pathway, as revealed by GMFA and GSEA analyses. In vivo, BLCF reduced lung bacterial load, improved the wet/dry ratio, and decreased inflammatory cytokines, thereby enhancing lung histopathology through modulation of the TNF-α/TNFR1/NF-κB/MMP9 axis. CONCLUSIONS BLCF can effectively treat MRSA pneumonia in mice by inhibiting SrtA activity, decreasing hemolytic activity, and regulating the TNF-α/TNFR1/NF-κB/MMP9 axis. These findings suggest BLCF, a traditional herbal formula, as a promising novel therapeutic approach to treat pneumonia.
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Affiliation(s)
- Tao Jiang
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Xiujing Zhu
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Zixin Yin
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Rui Gao
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Yufen Li
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Chenhao Li
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Qianting Meng
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Xiaojuan Zhu
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Wu Song
- Changchun University of Chinese Medicine, Changchun 130117, China.
| | - Xin Su
- Changchun University of Chinese Medicine, Changchun 130117, China.
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8
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Lan L, Wang Y, Chen Y, Wang T, Zhang J, Tan B. A Review on the Prevalence and Treatment of Antibiotic Resistance Genes in Hospital Wastewater. TOXICS 2025; 13:263. [PMID: 40278579 PMCID: PMC12031161 DOI: 10.3390/toxics13040263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2025] [Revised: 03/29/2025] [Accepted: 03/29/2025] [Indexed: 04/26/2025]
Abstract
Antibiotic resistance is a global environmental and health threat. Approximately 4.95 million deaths were associated with antibiotic resistance in 2019, including 1.27 million deaths that were directly attributable to bacterial antimicrobial resistance. Hospital wastewater is one of the key sources for the spread of clinically relevant antibiotic resistance genes (ARGs) into the environment. Understanding the current situation of ARGs in hospital wastewater is of great significance. Here, we review the prevalence of ARGs and antibiotic-resistant bacteria (ARB) in hospital wastewater and wastewater from other places and the treatment methods used. We further discuss the intersection between ARGs and COVID-19 during the pandemic. This review highlights the issues associated with the dissemination of critical ARGs from hospital wastewater into the environment. It is imperative to implement more effective processes for hospital wastewater treatment to eliminate ARGs, particularly during the current long COVID-19 period.
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Affiliation(s)
- Lihua Lan
- Key Laboratory of Recycling and Eco-Treatment of Waste Biomass of Zhejiang Province, School of Environment and Natural Resources, Zhejiang University of Science and Technology, Hangzhou 310023, China; (L.L.); (Y.W.); (Y.C.); (T.W.)
| | - Yixin Wang
- Key Laboratory of Recycling and Eco-Treatment of Waste Biomass of Zhejiang Province, School of Environment and Natural Resources, Zhejiang University of Science and Technology, Hangzhou 310023, China; (L.L.); (Y.W.); (Y.C.); (T.W.)
| | - Yuxin Chen
- Key Laboratory of Recycling and Eco-Treatment of Waste Biomass of Zhejiang Province, School of Environment and Natural Resources, Zhejiang University of Science and Technology, Hangzhou 310023, China; (L.L.); (Y.W.); (Y.C.); (T.W.)
| | - Ting Wang
- Key Laboratory of Recycling and Eco-Treatment of Waste Biomass of Zhejiang Province, School of Environment and Natural Resources, Zhejiang University of Science and Technology, Hangzhou 310023, China; (L.L.); (Y.W.); (Y.C.); (T.W.)
| | - Jin Zhang
- Key Laboratory of Recycling and Eco-Treatment of Waste Biomass of Zhejiang Province, School of Environment and Natural Resources, Zhejiang University of Science and Technology, Hangzhou 310023, China; (L.L.); (Y.W.); (Y.C.); (T.W.)
| | - Biqin Tan
- Key Laboratory of Clinical Cancer Pharmacology and Toxicology Research of Zhejiang Province, Department of Pharmacy, Affiliated Hangzhou First People’s Hospital, School of Medicine, Westlake University, Hangzhou 310006, China
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9
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Zhang X, Zhou L, Peng P, Zhang W, Liang C. Role of Antimicrobial Stewardship in Modulating Antibiotic Use and Mitigating Bacterial Resistance in a Tertiary Care Setting During COVID-19. Infect Drug Resist 2025; 18:1647-1656. [PMID: 40177170 PMCID: PMC11963796 DOI: 10.2147/idr.s500379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2024] [Accepted: 03/20/2025] [Indexed: 04/05/2025] Open
Abstract
Purpose Despite the widespread adoption of antimicrobial stewardship (AMS) programs, their effectiveness varies because of differing regional policies and socioeconomic factors. This study aimed to assess the impact of AMS at a Chinese tertiary care hospital on inpatient antimicrobial use and bacterial resistance during the COVID-19 outbreak. Methods An interrupted time-series regression analysis was conducted to compare inpatient antimicrobial use between pre- and post-intervention periods. The Chi-squared test and linear regression analysis were used to compare bacterial resistance and illustrate temporal trends in bacterial resistance, respectively. Results Following the AMS strategy implementation, we observed a significant decrease in antimicrobial consumption at unrestricted (β2 = -6.38, P = 0.004), restricted (β2 = -17.81, P < 0.001), and special levels (β2 = -2.32, P < 0.001). Despite a reduction in the use of third-generation cephalosporins and macrolides (β2 = -6.85, P < 0.001; β2 = -2.82, P < 0.001), an increase in the trend of use was observed post-intervention (β3 = 0.15, P < 0.001; β3 = 0.04, P = 0.001). Methicillin resistance in Staphylococcus aureus significantly decreased (β = -0.23, P < 0.001) from 52.85% to 40.92%. Conversely, the prevalence of carbapenem-resistant Klebsiella pneumonia increased from 4.69% to 10.87% (P < 0.001), whereas resistance to Acinetobacter baumannii and Pseudomonas aeruginosa marginally decreased (P<0.05). We observed decreases in the antimicrobial utilization rate (β2 = -11.86, P = 0.003) and combination utilization rate (β2 = -12.36, P = 0.011) post-intervention. No significant changes in special-level antimicrobial and prophylactic agent use in category I incisional surgeries were observed. Conclusion An AMS program in a Chinese tertiary facilitated effective management of antimicrobial use and reduction of bacterial resistance during the COVID-19 pandemic, in the context of combined infection prevention and control measures. The findings provide useful insights for the implementation of antimicrobial stewardship in future public health crises.
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Affiliation(s)
- Xueyan Zhang
- Department of Pharmacy, Sixth Affiliated Hospital of Guangxi Medical University, Yulin, Guangxi, 537000, People’s Republic of China
| | - Lijuan Zhou
- Department of Pharmacy, Sixth Affiliated Hospital of Guangxi Medical University, Yulin, Guangxi, 537000, People’s Republic of China
| | - Pingzhi Peng
- Office of Drug Clinical Trial Institution, Sixth Affiliated Hospital of Guangxi Medical University, Yulin, Guangxi, 537000, People’s Republic of China
| | - Weiquan Zhang
- Office of Drug Clinical Trial Institution, Sixth Affiliated Hospital of Guangxi Medical University, Yulin, Guangxi, 537000, People’s Republic of China
| | - Chunhong Liang
- Office of Drug Clinical Trial Institution, Sixth Affiliated Hospital of Guangxi Medical University, Yulin, Guangxi, 537000, People’s Republic of China
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Russell G, Alegoz R, Hester K, Sierzega KL, Szul MJ, Hubert N, Rylander T, Jensen S, Ciancio MJ, Martinez-Guryn K, Evans CC. The Microbiome of an Outpatient Sports Medicine Clinic During a Global Pandemic: Effects of Implementation of a Microbiome-Specific Cleaning Program. Microorganisms 2025; 13:737. [PMID: 40284573 PMCID: PMC12029496 DOI: 10.3390/microorganisms13040737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2025] [Revised: 03/13/2025] [Accepted: 03/20/2025] [Indexed: 04/29/2025] Open
Abstract
Outpatient healthcare facilities represent potential sources of healthcare-associated infections (HAIs). The purpose of this study was to survey high-contact surfaces in an outpatient physical therapy clinic, characterize the microbiome of those surfaces, and investigate the effects of a microbiome-specific cleaning and hygiene plan. Hand sanitizer containing a fluorescent probe used by patients and staff identified surface contact. High-contact surfaces were analyzed for bacterial DNA and SARS-CoV-2. A microbiome-specific cleaning and hygiene plan was developed based on initial analysis. After the implementation of the revised cleaning regimen, microbial community diversity and predicted metagenome content (PICRUSt) were employed for differential analysis. Patients had greater surface contact than staff. Ralstonia pickettii was the dominant species pre-cleaning, comprising 49.76% of the total, and observed on 79.5% of surfaces. The cleaning and hygiene plan significantly increased Shannon diversity, and R. pickettii decreased to 4.05% of total bacteria. SARS-CoV-2 was not observed on any surfaces. This study found ecological dominance by a single species in this outpatient clinic, suggesting a potential source of HAIs. However, a microbiome-specific cleaning strategy was successful in diversifying the microbiome and reducing ecological dominance. Additional research is needed to confirm these findings.
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Affiliation(s)
- Greer Russell
- Department of Biomedical Sciences, College of Graduate Studies, Midwestern University, Downers Grove, IL 60515, USA; (G.R.); (M.J.C.); (K.M.-G.)
| | - Rabia Alegoz
- Department of Physical Therapy, College of Health Sciences, Midwestern University, Downers Grove, IL 60515, USA; (R.A.); (K.H.); (K.L.S.)
| | - Kelley Hester
- Department of Physical Therapy, College of Health Sciences, Midwestern University, Downers Grove, IL 60515, USA; (R.A.); (K.H.); (K.L.S.)
| | - Kayla L. Sierzega
- Department of Physical Therapy, College of Health Sciences, Midwestern University, Downers Grove, IL 60515, USA; (R.A.); (K.H.); (K.L.S.)
| | - Martin J. Szul
- Department of Microbiology and Immunology, College of Graduate Studies, Midwestern University, Downers Grove, IL 60515, USA;
| | - Nathaniel Hubert
- Independent Contractor in Bioinformatics Analysis, Mundelein, IL 60060, USA;
| | - Timothy Rylander
- Impact Physical Therapy, Hinsdale, IL 60521, USA; (T.R.); (S.J.)
| | - Sarah Jensen
- Impact Physical Therapy, Hinsdale, IL 60521, USA; (T.R.); (S.J.)
| | - Mae J. Ciancio
- Department of Biomedical Sciences, College of Graduate Studies, Midwestern University, Downers Grove, IL 60515, USA; (G.R.); (M.J.C.); (K.M.-G.)
| | - Kristina Martinez-Guryn
- Department of Biomedical Sciences, College of Graduate Studies, Midwestern University, Downers Grove, IL 60515, USA; (G.R.); (M.J.C.); (K.M.-G.)
| | - Christian C. Evans
- Department of Physical Therapy, College of Health Sciences, Midwestern University, Downers Grove, IL 60515, USA; (R.A.); (K.H.); (K.L.S.)
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Saeed NK, Almusawi SK, Albalooshi NA, Al-Beltagi M. Unveiling the impact: COVID-19's influence on bacterial resistance in the Kingdom of Bahrain. World J Virol 2025; 14:100501. [PMID: 40134836 PMCID: PMC11612879 DOI: 10.5501/wjv.v14.i1.100501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/18/2024] [Revised: 10/22/2024] [Accepted: 11/15/2024] [Indexed: 11/28/2024] Open
Abstract
BACKGROUND Antibiotic resistance is a growing global health threat, and understanding local trends in bacterial isolates and their susceptibility patterns is crucial for effective infection control and antimicrobial stewardship. The coronavirus disease 2019 (COVID-19) pandemic has introduced additional complexities, potentially influencing these patterns. AIM To analyze trends in bacterial isolates and their antibiotic susceptibility patterns at Salmaniya Medical Complex from 2018 to 2023, with a specific focus on the impact of the COVID-19 pandemic on these trends. METHODS A retrospective analysis of microbiological data was conducted, covering the period from 2018 to 2023. The study included key bacterial pathogens such as Escherichia coli (E. coli), Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Staphylococcus aureus, among others. The antibiotic susceptibility profiles of these isolates were assessed using standard laboratory methods. To contextualize the findings, the findings were compared with similar studies from other regions, including China, India, Romania, Saudi Arabia, the United Arab Emirates, Malaysia, and United States. RESULTS The study revealed fluctuating trends in the prevalence of bacterial isolates, with notable changes during the COVID-19 pandemic. For example, a significant increase in the prevalence of Staphylococcus aureus was observed during the pandemic years, while the prevalence of E. coli showed a more variable pattern. Antibiotic resistance rates varied among the different pathogens, with a concerning rise in resistance to commonly used antibiotics, particularly among Klebsiella pneumoniae and E. coli. Additionally, the study identified an alarming increase in the prevalence of multidrug-resistant (MDR) strains, especially within Klebsiella pneumoniae and E. coli isolates. The impact of the COVID-19 pandemic on these trends was evident, with shifts in the frequency, resistance patterns, and the emergence of MDR bacteria among several key pathogens. CONCLUSION This study highlights the dynamic nature of bacterial isolates and their antibiotic susceptibility patterns at Salmaniya Medical Complex, particularly in the context of the COVID-19 pandemic. The findings underscore the need for continuous monitoring and effective anti-microbial stewardship programs to combat the evolving threat of antibiotic resistance. Further research and policy initiatives are required to address the identified challenges and improve patient outcomes in the face of these ongoing challenges.
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Affiliation(s)
- Nermin K Saeed
- Medical Microbiology Section, Department of Pathology, Salmaniya Medical Complex, Governmental Hospitals, Manama 12, Bahrain
- Medical Microbiology Section, Department of Pathology, Royal College of Surgeons in Ireland–Medical University of Bahrain, Busaiteen 15503, Muharraq, Bahrain
| | - Safiya K Almusawi
- Medical Microbiology Section, Department of Pathology, Salmaniya Medical Complex, Governmental Hospitals, Manama 12, Bahrain
- Medical Microbiology Section, Department of Pathology, Royal College of Surgeons in Ireland–Medical University of Bahrain, Busaiteen 15503, Muharraq, Bahrain
| | - Noor A Albalooshi
- Medical Microbiology Section, Department of Pathology, Salmaniya Medical Complex, Governmental Hospitals, Manama 12, Bahrain
| | - Mohammed Al-Beltagi
- Department of Paediatrics, Faculty of Medicine, Tanta University, Tanta 31511, Alghrabia, Egypt
- Department of Pediatric, University Medical Center, King Abdulla Medical City, Arabian Gulf University, Manama 26671, Algharbia, Bahrain
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12
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Lara C, Orsini M, Pohlenz M, Ulloa K, Castro I, Muñoz-Almagro C, Brotons P. The impact of the COVID-19 national health alert on Enterobacteriaceae hospital outbreaks in Chile. J Hosp Infect 2025:S0195-6701(25)00066-0. [PMID: 40127720 DOI: 10.1016/j.jhin.2025.03.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2024] [Revised: 02/10/2025] [Accepted: 03/11/2025] [Indexed: 03/26/2025]
Abstract
BACKGROUND The impact of public health interventions against the COVID-19 pandemic on the occurrence of Enterobacteriaceae outbreaks in hospitals remains unclear. OBJECTIVE To determine the effect of the COVID-19 national health alert on the secular trend of Enterobacteriaceae outbreaks in Chilean public hospitals while characterizing their antibiotic resistance patterns. METHODS Nationwide retrospective ecological study using interrupted time series analysis of monthly outbreak-related cases over three periods: pre-pandemic (January 2017-February 2020), health alert (March 2020-August 2023), and post-pandemic (September-December 2023). RESULTS A total of 106 outbreaks, 1,131 associated cases, and 254 deaths were identified in 47/196 (24.0%) hospitals. Cases increased gradually (0.39 cases-month, 95% CI 0.02-0.75; p=0.040) in the pre-pandemic years. A sudden rise of 33.42 cases (95% CI 7.53-59.31 cases; p=0.012) in March 2020, followed by a gradual decrease (1.28 cases-month, 95% CI 0.38-2.17; p=0.006) during the health alert. A rebound of 18.02 cases (95% CI 2.89-33.15; p=0.020) occurred in September 2023 and preceded a gradual post-pandemic decline (6.21 cases-month, 95% CI 1.11-11.31; p=0.018). Prevalence of cases caused by carbapenemase-producing enterobacteria rose significantly (p<0.001) during (79.9%) and after the health alert (100.0%) compared to the pre-alert period (35.3%). CONCLUSIONS The COVID-19 national health alert was associated with significant shifts in the secular trend of cases associated with Enterobacteriaceae outbreaks in Chilean public hospitals, including abrupt increases at the beginning and end of the health alert and gradual decreases during and after this period. A sharp increase in carbapenemase production was observed across outbreaks after the pandemic onset.
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Affiliation(s)
- Cristian Lara
- National Program Infections Control, Ministry of Health of Chile(PNCI), Santiago de Chile, Chile; Doctoral School, Universitat Internacional de Catalunya, Barcelona, Spain
| | - Mauro Orsini
- National Program Infections Control, Ministry of Health of Chile(PNCI), Santiago de Chile, Chile
| | - Mónica Pohlenz
- National Program Infections Control, Ministry of Health of Chile(PNCI), Santiago de Chile, Chile
| | - Karen Ulloa
- National Program Infections Control, Ministry of Health of Chile(PNCI), Santiago de Chile, Chile
| | - Ignacio Castro
- Immunizations Program, Panamerican Health Organization, Santiago de Chile, Chile
| | - Carmen Muñoz-Almagro
- Department of Medicine, Universitat Internacional de Catalunya, Barcelona, Spain; Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Déu Esplugues, Barcelona, Spain; Consorcio de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Madrid, Spain
| | - Pedro Brotons
- Department of Medicine, Universitat Internacional de Catalunya, Barcelona, Spain; Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Déu Esplugues, Barcelona, Spain; Consorcio de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Madrid, Spain.
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13
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Al-Odat M, Mustafa S, Al-Hajaya Y, Kandari A, Alaroud A, Alenezi A, Qaralleh H, Hazaimeh Y. Community Pharmacists' Responses Toward Antimicrobial Prescriptions in Jordan: A Cross-Sectional Survey. Antibiotics (Basel) 2025; 14:300. [PMID: 40149110 PMCID: PMC11939746 DOI: 10.3390/antibiotics14030300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2024] [Revised: 01/12/2025] [Accepted: 01/15/2025] [Indexed: 03/29/2025] Open
Abstract
Background: Globally, community pharmacists worldwide have prescribed more over-the-counter systemic antibiotics, posing significant issues for international organizations tackling antibiotic-resistant bacteria, a major global threat, due to the accessibility in pharmacies. Objectives: This study aimed to examine the Jordanian pharmacists' antibiotic selection and over-the-counter antibiotic prescriptions. Methods: A total of 244 community pharmacists participated in an online standardized survey, which examined five essential domains including sources and trust of pharmacy antibiotic prescription information, category and frequency of permitted antimicrobials, prescription-free antimicrobials, interactions, antimicrobial prescription issues for pharmacists, and pharmacy staff's knowledge of non-prescription antimicrobial questions and answers. Results: This study found that 1-pharmacists are confident in prescribing antibiotics and they use various tools to improve their skills. 2-Antibiotics were the most sought antimicrobials without a prescription, followed by antifungals and antivirals. 3-Throat, urinary tract, chest, and otitis media are the most common infections that require antibiotics. Pharmacists prescribe penicillin for 75% of throat infections, Fluoroquinolones for 48.2% of urinary tract infections, and cephalosporins for 35.9%. Macrolides are the most prevalent otitis media treatment (43.2%). 4-Some people obtain antimicrobial prescriptions without a valid reason or diagnosis. 5-Many pharmacists (171/244, 70%) agree or strongly believe that antibiotic prescription information is difficult to obtain. 6-Many pharmacists (183/200, 91.5%) aimed to educate patients on the risks and correct use of antimicrobials without prescriptions. Conclusions: These results show that Jordanian community pharmacists follow clinical antibiotic prescribing guidelines and conduct antimicrobial stewardship, yet they demand antimicrobials without prescriptions and lack decision support tools. Antibiotic classes address most diseases, and pharmacists emphasize antimicrobial misuse.
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Affiliation(s)
- Ma’en Al-Odat
- Department of Medical Laboratory Science, Faculty of Allied Medical Science, Mutah University, Karak 61710, Jordan;
| | - Shadi Mustafa
- Faculty of Pharmacy, Jerash University, Jerash 26150, Jordan;
| | - Yousef Al-Hajaya
- Department of Biological Sciences, Faculty of Science, Mutah University, Karak 61710, Jordan;
| | - Anwar Kandari
- Dasman Diabetes Institute, Kuwait City 15462, Kuwait;
| | - Amane Alaroud
- Faculty of Pharmacy, Mutah University, Karak 61710, Jordan; (A.A.); (Y.H.)
| | - Ahmad Alenezi
- Radiologic Sciences Department, Health Sciences Center, Kuwait University, Kuwait 12037, Kuwait
| | - Haitham Qaralleh
- Department of Medical Laboratory Science, Faculty of Allied Medical Science, Mutah University, Karak 61710, Jordan;
| | - Yasmeen Hazaimeh
- Faculty of Pharmacy, Mutah University, Karak 61710, Jordan; (A.A.); (Y.H.)
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14
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Ma ESK, Hsu E, Chow V, Chow T, Kung KH, Au A, Chen H. Rebound of Antibiotic Use and Respiratory Infections After Resumption of Normalcy From COVID-19 in Hong Kong. Infect Drug Resist 2025; 18:1325-1337. [PMID: 40092846 PMCID: PMC11910044 DOI: 10.2147/idr.s502126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2024] [Accepted: 02/04/2025] [Indexed: 03/19/2025] Open
Abstract
Purpose During COVID-19 pandemic, use of antimicrobial has been shown to be reduced coupled with various respiratory infections. We investigated whether this effect on reduction of antibiotic prescription can be sustained after resumption of normalcy and lifting of public health measures. Methods We compared the wholesale supply of antimicrobials using mean annual Daily Defined Dose/1000 inhabitants (DID) in different sectors in pre-COVID-19 (2014-2019), COVID-19 (2020-2022) and post-COVID-19 (2023) periods. We grouped the data according to AWaRe categorisation namely Access, Watch and Reserve defined by WHO, and analysed the trends of the top 10 antibiotics and broad-spectrum antimicrobials. The trends in statutory notifiable diseases including scarlet fever, pneumococcal infections, chickenpox, tuberculosis, and pertussis and influenza-like-illness detected by sentinel surveillance system was analysed by negative-binominal regression. Results Compared to baseline level, an overall reduction of 27.2% of antimicrobial utilization was observed during the pandemic years, with a rebound recorded in 2023, up to 89.5% of the pre-pandemic level. The access group of antimicrobials accounted for 57.9% in 2014 gradually increased to 60.2% in 2023 across the pandemic years. Concurrently, reduction in incidence of scarlet fever, pneumococcal infections, chickenpox, tuberculosis, pertussis and influenza-like-illness was observed during COVID-19 pandemic with statistical decreasing trend, p<0.05 for scarlet fever, pneumococcal infections and chickenpox. Rebound in all these infections was reported in 2023, except for chickenpox which showed continued decrease in incidence. Conclusion We demonstrated a substantial reduction of antibiotic use during the COVID-19 pandemic, which rebounded in 2023, likely due to increased incidence of respiratory diseases after lifting of public health and social measures. We urged for close monitoring of the antimicrobial resistance pattern of different bacteria due to the inter-connectiveness and global impact of these two pandemics.
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Affiliation(s)
- Edmond Siu-Keung Ma
- Infection Control Branch, Centre for Health Protection, Department of Health, Hong Kong, Special Administrative Region, People's Republic of China
| | - Enoch Hsu
- Infection Control Branch, Centre for Health Protection, Department of Health, Hong Kong, Special Administrative Region, People's Republic of China
| | - Vincent Chow
- Infection Control Branch, Centre for Health Protection, Department of Health, Hong Kong, Special Administrative Region, People's Republic of China
| | - Tracy Chow
- Infection Control Branch, Centre for Health Protection, Department of Health, Hong Kong, Special Administrative Region, People's Republic of China
| | - K H Kung
- Communicable Disease Branch, Centre for Health Protection, Department of Health, Hong Kong, Special Administrative Region, People's Republic of China
| | - Albert Au
- Communicable Disease Branch, Centre for Health Protection, Department of Health, Hong Kong, Special Administrative Region, People's Republic of China
| | - Hong Chen
- Infection Control Branch, Centre for Health Protection, Department of Health, Hong Kong, Special Administrative Region, People's Republic of China
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Dao HV, Hoang TM, Nguyen MT, Dang TV, Nguyen DM, Tran HT, Nguyen KM, Tran HTM. Recycling electroplating sludge as an efficient photocatalyst for degradation of ciprofloxacin in aqueous solution. JOURNAL OF THE AIR & WASTE MANAGEMENT ASSOCIATION (1995) 2025; 75:252-265. [PMID: 39745786 DOI: 10.1080/10962247.2024.2446361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2024] [Revised: 12/03/2024] [Accepted: 12/11/2024] [Indexed: 01/04/2025]
Abstract
This study explored the potential of electroplating sludge (ESs) as a novel and effective photocatalyst for the photodegradation of ciprofloxacin in aqueous solutions. The characterization of the ESs was evaluated using sophisticated techniques, such as XRD, SEM, TEM, EDX, FTIR, and BET. ESs-derived photocatalyst materials were found to primarily consist of various metal oxides (Ni-O, Cu-O), which can absorb ultraviolet or visible light. The effectiveness of photodegradation was assessed by measuring the decomposition of Ciprofloxacin (CIP) in aqueous solutions. The results showed that after 180 min of UVA illumination, a remarkable photodegradation effectiveness of 93.87% was achieved for a CIP concentration of 10 mg L-1, pH = 9, catalyst dose of 1.0 g/L indicating ESs as an effective method for removing CIP from wastewater. The effect of other factors, such as other antibiotics, dyes, and phenol, were also carried out to illustrate high dominant capacity in the degradation of organic compounds. The radical scavenger demonstrated that h+ and O2●- are the main species for the degradation of CIP. This research presents an adaptable, scalable framework for sustainable electroplating sludge reuse. The easily implementable method promises widespread adoption, enhancing sustainability and resource efficiency by repurposing the treated waste as a photocatalyst for antibiotic degradation.Implications: This research investigates the potential of electroplating sludge (ESs) as a sustainable and effective photocatalyst for the degradation of ciprofloxacin (CIP) in wastewater. This study demonstrates that ESs, containing photoactive metal oxides, can effectively degrade CIP under ultraviolet light irradiation. This research suggests that ESs offer a cost-effective and environmentally friendly approach to wastewater treatment, promoting a circular economy. The findings contribute to the development of sustainable solutions for a cleaner and safer environment.
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Affiliation(s)
- Hien Van Dao
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Vietnam
| | - Trang Minh Hoang
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Vietnam
| | - Mai Thi Nguyen
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Vietnam
- Faculty of Basic Sciences, Thai Nguyen University of Agriculture and Forestry, Thai Nguyen, Vietnam
| | - Thanh Van Dang
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Vietnam
- Faculty of Basic Sciences, Thai Nguyen University of Pharmacy and Medicine, Thai Nguyen, Vietnam
- VNU Key Laboratory of Green Environment, Technology and Waste Utilization (GreenLab), University of Science, Vietnam National University, Hanoi, Vietnam
| | - Dung Manh Nguyen
- Research Institute for Resources and Climate Change, Hanoi University of Natural Resources and Environment, Hanoi, Vietnam
| | - Huong Thi Tran
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Vietnam
- Department of Natural Resources and Environment of Thai Nguyen, Environmental Protection Agency, Thai Nguyen, Vietnam
| | - Khai M Nguyen
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Vietnam
- VNU Key Laboratory of Green Environment, Technology and Waste Utilization (GreenLab), University of Science, Vietnam National University, Hanoi, Vietnam
| | - Hang T M Tran
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Vietnam
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Antunes BBP, Bastos LSL, Kurtz P, Sant'Anna LM, Del Peloso PF, Espanha CA, Hamacher S, Bozza FA. Persistent carbapenem resistance in mechanically ventilated ICU patients: A before-and-after analysis of the COVID-19 surge. Am J Infect Control 2025; 53:320-325. [PMID: 39433156 DOI: 10.1016/j.ajic.2024.10.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2024] [Revised: 10/14/2024] [Accepted: 10/15/2024] [Indexed: 10/23/2024]
Abstract
BACKGROUND The evolution of antimicrobial resistance among critically ill patients before, during, and after the COVID-19 surge remains unclear. METHODS We retrospectively analyzed critically ill mechanically ventilated adult patients admitted to 8 Brazilian hospitals from Jan 1, 2018 to Apr 30, 2023. We stratified the patients into 3 periods: pre-surge (Jan 01, 2018-Mar 01, 2020), surge (Mar 01, 2020-Oct 01, 2021), and post-surge (after October 01, 2021). Positive cultures, pathogen prevalence, and resistance rates were analyzed using rate ratios (RR) with 95% confidence intervals (CI). RESULTS Among 9,780 patients (3,718 pre-surge, 3,815 surge, 2,247 post-surge), those in surge period were younger (median: 70 vs 74 pre-surge vs 75 post surge) and had longer invasive mechanical ventilation duration (median 7 vs 5 days). Blood and respiratory cultures increased across periods (56.9 pre-surge vs 69.4 surge vs 70.4 patients/1,000 patient-days post-surge). Isolation of carbapenem-resistant gram-negatives increased during the surge (RR [95% CI]: 1.8 [1.5-2.2], decreased in post-surge (0.72 [0.6-0.9]), and remained higher than pre-surge (1.3 [1.0-1.6]). Resistance rates for Pseudomonas aeruginosa reduced in post-surge, whereas Klebsiella pneumoniae doubled during the surge, and remained elevated. CONCLUSIONS Carbapenem resistance increased during the surge period. Although it decreased post-surge, it remained higher than pre-pandemic rates.
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Affiliation(s)
- Bianca B P Antunes
- Department of Industrial Engineering, Pontifical Catholic University of Rio de Janeiro (PUC-Rio), Rio de Janeiro, Rio de Janeiro, Brazil
| | - Leonardo S L Bastos
- Department of Industrial Engineering, Pontifical Catholic University of Rio de Janeiro (PUC-Rio), Rio de Janeiro, Rio de Janeiro, Brazil
| | - Pedro Kurtz
- Department of Critical Care, D'Or Institute for Research and Education (IDOR), Rio de Janeiro, Rio de Janeiro, Brazil; Intensive Care Department, Copa Star Hospital, Rio de Janeiro, Rio de Janeiro, Brazil; Intensive Care Department, Paulo Niemeyer State Brain Institute (IECPN), Rio de Janeiro, Rio de Janeiro, Brazil
| | - Letícia M Sant'Anna
- Department of Industrial Engineering, Pontifical Catholic University of Rio de Janeiro (PUC-Rio), Rio de Janeiro, Rio de Janeiro, Brazil
| | - Pedro F Del Peloso
- Department of Critical Care, D'Or Institute for Research and Education (IDOR), Rio de Janeiro, Rio de Janeiro, Brazil; Laboratory of Clinical Microbiology, Richet Laboratory, Rio de Janeiro, Brazil
| | - Claudia A Espanha
- Department of Critical Care, D'Or Institute for Research and Education (IDOR), Rio de Janeiro, Rio de Janeiro, Brazil; Hospital Infection Control Comittee, Clínica São Vicente, Rio de Janeiro, Rio de Janeiro, Brazil
| | - Silvio Hamacher
- Department of Industrial Engineering, Pontifical Catholic University of Rio de Janeiro (PUC-Rio), Rio de Janeiro, Rio de Janeiro, Brazil
| | - Fernando A Bozza
- Department of Critical Care, D'Or Institute for Research and Education (IDOR), Rio de Janeiro, Rio de Janeiro, Brazil; National Institute of Infectious Disease Evandro Chagas (INI), Oswaldo Cruz Foundation (Fiocruz), Rio de Janeiro, Rio de Janeiro, Brazil; Comprehensive Health Research Centre (CHRC), NOVA Medical School, Universidade NOVA de Lisboa, Lisbon, Portugal.
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Ji W, Zhao Y, Du J, Zhao H, McIver DJ, Ye D, Yan K, Wei X, Fang Y. Determining the impact of the COVID-19 pandemic on the consumption of antibiotics in Shaanxi province, China: an interrupted time-series analysis. Front Public Health 2025; 13:1475207. [PMID: 40046123 PMCID: PMC11880026 DOI: 10.3389/fpubh.2025.1475207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2024] [Accepted: 02/03/2025] [Indexed: 05/13/2025] Open
Abstract
Background The COVID-19 pandemic, as well as associated prevention and control measures, have impacted the entire healthcare system, including the use patterns of medicine. However, the impact of COVID-19 on the use of antibiotics has not yet been extensively evaluated in China. This study aimed to evaluate the impact of the pandemic on the consumption and expenditure of antibiotics in public healthcare institutions in Shaanxi Province, China. Methods We used longitudinal data from the Shaanxi provincial drug procurement database in this study. An interrupted time-series analysis was performed to evaluate the effects of COVID-19 on consumption and expenditures of antibiotics in public healthcare institutions in Shaanxi from 1 January 2017 to 31 December 2020. Antibiotic consumption was expressed as the number of defined daily doses (DDDs) per 1,000 residents per day (DIDs), based on the population of Shaanxi Province at the end of each year from the National Bureau of Statistics. The pre-pandemic period was from January 2017 to January 2020, and the post-pandemic period was from February 2020 to December 2020. Results A declining trend in antibiotic consumption was observed immediately following the COVID-19 pandemic (β2 = -4.099; p < 0.001). Regarding the route of administration, a larger decrease in the consumption of oral antibiotics was observed compared to parenteral (β2 = -3.056; p < 0.001). The decrease in antibiotic consumption in the Watch category (β2 = -2.164; p < 0.001) was larger than in the Access category (β2 = -1.773; p < 0.001), and penicillins (J01C) (β2 = -1.261; p < 0.001) showed a higher decline than cephalosporins (J01D) (β2 = -1.147; p < 0.001). An increasing trend of broad-spectrum antibiotic consumption was observed after the onset of the pandemic (β3 = 0.021; p = 0.015). Expenditures on and consumption of antibiotics follow essentially the same trend. Conclusion Despite an initial decline in antibiotic consumption at the start of the COVID-19 pandemic, it had returned to prior levels by the end of 2020. Findings underscore the continued importance of antibiotic stewardship initiatives.
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Affiliation(s)
- Wenjing Ji
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmacy, Xi'an Jiaotong University, Xi'an, China
| | - Yifei Zhao
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmacy, Xi'an Jiaotong University, Xi'an, China
| | - Jiaxi Du
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmacy, Xi'an Jiaotong University, Xi'an, China
| | - Hang Zhao
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmacy, Xi'an Jiaotong University, Xi'an, China
| | - David J. McIver
- Institute for Global Health Sciences, University of California, San Francisco, San Francisco, CA, United States
| | - Dan Ye
- Department of Pharmacy, Xi'an No.3 Hospital, The Affiliated Hospital of Northwest University, Xi'an, China
| | - Kangkang Yan
- Department of Pharmacy, Xi'an No.3 Hospital, The Affiliated Hospital of Northwest University, Xi'an, China
| | - Xiaolin Wei
- Dalla Lana School of Public Health, University of Toronto, Toronto, ON, Canada
| | - Yu Fang
- Department of Pharmacy Administration and Clinical Pharmacy, School of Pharmacy, Xi'an Jiaotong University, Xi'an, China
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18
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Ng RWY, Yang L, Lau SH, Hawkey P, Ip M. Global prevalence of human intestinal carriage of ESBL-producing E. coli during and after the COVID-19 pandemic. JAC Antimicrob Resist 2025; 7:dlaf001. [PMID: 39866328 PMCID: PMC11759295 DOI: 10.1093/jacamr/dlaf001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2024] [Accepted: 12/24/2024] [Indexed: 01/28/2025] Open
Abstract
Background There is a pressing need for global surveillance of ESBL-producing Escherichia coli due to its health impacts, travel and increased antibiotic use during the COVID-19 pandemic. This systematic review and meta-analysis aimed to summarize evidence investigating the global prevalence of ESBL E. coli. Methods Four databases, including Embase, MEDLINE, PubMed and Web of Science, were searched for quantitative studies that reported prevalence data of faecal carriage of ESBL-producing E. coli published between 23 April 2021 and 22 April 2024. Meta-analysis was performed using the inverse variance heterogeneity model. Results Of the 25 studies (13 901 unique participants) included for final analysis, the overall pooled prevalence of ESBL E. coli was 25.4% (95% CI, 19.7%-31.2%). The pooled prevalences of ESBL E. coli in healthy individuals in community settings and inpatients in healthcare settings were 23.4% (95% CI, 14.7%-32.2%) and 27.7% (95% CI, 18.8%-36.7%), respectively. Nearly one-third of the included studies (32%) were from the Western Pacific Region. There was a significant between-group difference for studies with different WHO regions and healthcare contact. Conclusions The pooled prevalence of ESBL E. coli remains high and there was a significant between-group difference for different WHO regions, with the highest being in Asian regions. Standardized surveillance of antimicrobial resistance and antibiotic stewardship especially in these regions are needed to enhance the control of this global emergency.
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Affiliation(s)
- Rita W Y Ng
- Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, N.T., Hong Kong, China
- S. H. Ho Research Centre for Infectious Diseases, The Chinese University of Hong Kong, China
| | - Liuyue Yang
- Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, N.T., Hong Kong, China
| | - Sai Hung Lau
- Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, N.T., Hong Kong, China
| | - Peter Hawkey
- Institute of Microbiology and Infection, University of Birmingham, UK
| | - Margaret Ip
- Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, N.T., Hong Kong, China
- S. H. Ho Research Centre for Infectious Diseases, The Chinese University of Hong Kong, China
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19
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Brinkwirth S, Feig M, Noll I, Eckmanns T, Dörre A, Haller S, Willrich N. Changing dynamics of bloodstream infections due to methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus faecium in Germany, 2017-2023: a continued burden of disease approach. Antimicrob Resist Infect Control 2025; 14:4. [PMID: 39885538 PMCID: PMC11783909 DOI: 10.1186/s13756-025-01522-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2024] [Accepted: 01/19/2025] [Indexed: 02/01/2025] Open
Abstract
BACKGROUND Antimicrobial resistance is a global threat to public health, with methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococcus faecium (VREfm) being major contributors. Despite their clinical impact, comprehensive assessments of changes of the burden of bloodstream infections in terms of Disability-Adjusted Life Years (DALYs) and attributable deaths over time are lacking, particularly in Germany. METHODS We used data from the Antimicrobial Resistance Surveillance system, which covered about 30% of German hospitals. Bloodstream infections were defined by a VREfm or MRSA-positive blood culture. We estimated incidences as a first step to further use these rates to calculate DALYs and attributable deaths using the Burden of Communicable Disease in Europe toolkit. The analysis included stratification by age, sex and region. RESULTS From 2017 to 2023, 6262 MRSA and 5442 VREfm blood culture-positive isolates were identified. The incidence of MRSA bloodstream infections decreased from 4.0 to 2.1 per 100,000 population, with estimated DALYs decreasing from 14.6 to 8.6 per 100,000 and attributable deaths from 591 to 316. Conversely, VREfm-BSI incidence doubled from 1.7 to a peak of 3.0 (2021) before declining back to 1.7 per 100,000 in 2023, with estimated DALYs increasing from 8.9 to 16.5 and then decreasing to 8.5 per 100,000 and attributable deaths increasing from 317 to 327. Men and people over 60 years had the highest burden, with noticeable regional differences. CONCLUSION MRSA and VREfm bloodstream infections followed different trends in the past and now present a comparable burden in Germany. Both pathogens pose a significant threat, particularly to hospitalised older aged men. Our findings highlight the need for targeted prevention and continued surveillance of MRSA and VREfm to reduce infections and their impact.
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Affiliation(s)
- Simon Brinkwirth
- Unit 37: Healthcare-Associated Infections, Surveillance of Antibiotic Resistance and Consumption, Department of Infectious Disease Epidemiology, Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
- Department of Infectious Disease Epidemiology, Postgraduate Training for Applied Epidemiology (PAE), Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
- ECDC Fellowship Programme, Field Epidemiology Path (EPIET), European Centre for Disease Prevention and Control (ECDC), Stockholm, Sweden
| | - Marcel Feig
- Unit MF2: Domain Specific Data Competence Centre, Department of Methods Development, Research Infrastructure and Information Technology, Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
| | - Ines Noll
- Unit 37: Healthcare-Associated Infections, Surveillance of Antibiotic Resistance and Consumption, Department of Infectious Disease Epidemiology, Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
| | - Tim Eckmanns
- Unit 37: Healthcare-Associated Infections, Surveillance of Antibiotic Resistance and Consumption, Department of Infectious Disease Epidemiology, Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
| | - Achim Dörre
- Unit 37: Healthcare-Associated Infections, Surveillance of Antibiotic Resistance and Consumption, Department of Infectious Disease Epidemiology, Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
- Department of Infectious Disease Epidemiology, Postgraduate Training for Applied Epidemiology (PAE), Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
| | - Sebastian Haller
- Unit 37: Healthcare-Associated Infections, Surveillance of Antibiotic Resistance and Consumption, Department of Infectious Disease Epidemiology, Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany
| | - Niklas Willrich
- Unit 37: Healthcare-Associated Infections, Surveillance of Antibiotic Resistance and Consumption, Department of Infectious Disease Epidemiology, Robert Koch Institute, Seestraße 10, 13353, Berlin, Germany.
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20
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Baum JHJ, Dörre A, Reichert F, Noll I, Feig M, Eckmanns T, Sandfort M, Haller S. Changes in incidence and epidemiology of antimicrobial resistant pathogens before and during the COVID-19 pandemic in Germany, 2015-2022. BMC Microbiol 2025; 25:51. [PMID: 39875841 PMCID: PMC11773696 DOI: 10.1186/s12866-024-03723-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2024] [Accepted: 12/20/2024] [Indexed: 01/30/2025] Open
Abstract
BACKGROUND Carbapenem-resistant Gram-negative bacteria and methicillin-resistant Staphylococcus aureus (MRSA) are among WHO's priority pathogens with antimicrobial resistance (AMR). Studies suggest potential impacts of the COVID-19-pandemic on AMR. We described changes in AMR incidence and epidemiology in Germany during the COVID-19-pandemic. METHODS We used two independent datasets, statutory surveillance and laboratory-based Antibiotic Resistance Surveillance (ARS). We included statutory notifications of infections/colonisations of carbapenem-resistant Acinetobacter spp., Klebsiella pneumoniae, Escherichia coli (CRA/CRKP/CREC) and invasive MRSA. Using Poisson/negative binomial regression and assuming continued pre-pandemic (2015/2017-2020) trends, we projected hypothetical notifications as if the pandemic had not occurred. We quantified annual changes during the pandemic period (2020-2022) by comparing to observed notifications. Additional models considered inpatient reductions, seasonality, infections only, or resistant isolates from ARS. RESULTS CRA notified cases were reduced by -30% (95%CI -39%|-20%) in 2020, -23% (-36%|-8%) in 2021, but + 32% (+ 6%|+64%) higher in 2022 relative to hypothetical pre-pandemic projections. Changes were - 35%/-31%/+6% for CRKP, -40%/-61%/-48% for CREC and - 33%/-25%/-20% for MRSA. Statutory-models accounting for fewer inpatients, seasonality and infections only showed similar trends, as did ARS-models for resistant isolates and infections. International mobility for CRA, CRKP and CREC decreased in 2020-2021, then increased in 2022. CONCLUSIONS We observed significant reductions of AMR notifications and infections during 2020-2021, also when accounting for fewer inpatients. We conclude a genuine reduction of AMR spread occurred during the pandemic. Factors like fewer hospitalisations and reduced international mobility contributed. Rising international mobility may partly explain increases for CRA, CRKP and CREC in 2022. A solid understanding of AMR trends improves infection prevention and control.
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Affiliation(s)
- Jonathan H J Baum
- Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
- Postgraduate Training for Applied Epidemiology (PAE), Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
- ECDC Fellowship Programme, Field Epidemiology path (EPIET), European Centre for Disease Prevention and Control (ECDC), Stockholm, Sweden
| | - Achim Dörre
- Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
- Postgraduate Training for Applied Epidemiology (PAE), Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
- ECDC Fellowship Programme, Field Epidemiology path (EPIET), European Centre for Disease Prevention and Control (ECDC), Stockholm, Sweden
| | - Felix Reichert
- Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
| | - Ines Noll
- Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
| | - Marcel Feig
- Department of Method Development, Research Infrastructure and Information Technology, Robert Koch Institute (RKI), Berlin, Germany
| | - Tim Eckmanns
- Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
| | - Mirco Sandfort
- Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany
| | - Sebastian Haller
- Department of Infectious Disease Epidemiology, Robert Koch Institute (RKI), Berlin, Germany.
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21
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Tilanus AM, Shields RK, Lodise TP, Drusano GL. Translating PK-PD principles into improved methodology for clinical trials which compare intermittent with prolonged infusion of beta-lactam antibiotics. Clin Infect Dis 2025:ciaf038. [PMID: 39869451 DOI: 10.1093/cid/ciaf038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2024] [Revised: 01/14/2025] [Accepted: 01/23/2025] [Indexed: 01/29/2025] Open
Abstract
Based on the fact that beta-lactam antibiotics demonstrate time-dependent killing, different dosing strategies have been implemented to increase the time that free (f) (unbound) antibiotic concentrations remain above the Minimal Inhibitory Concentration (MIC), including prolonged and continuous infusion. Multiple studies have been performed that compared continuous with traditional intermittent infusion to improve outcomes in patients with severe sepsis and/or septic shock. These studies have yielded inconsistent results for patients as measured by clinical response to treatment and mortality due to heterogeneity of included patients, pathogens, dosing strategies and the absence of Therapeutic Drug Monitoring (TDM). The MERCY and BLING III studies failed to show a difference in mortality between patients randomized to receive continuous and intermittent infusion of beta-lactam antibiotics.
A deeper understanding of pharmacokinetic (PK) and pharmacodynamic (PD) mechanisms that occur in critically ill patients should guide us in dose optimization and improvement in methodology for future clinical trials.
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Affiliation(s)
- Alwin M Tilanus
- Internist - infectious disease specialist/Biological Health Scientist Vida Medical/Department of infectious diseases, Bogotá, Colombia
| | - Ryan K Shields
- Associate Professor of Medicine - University of Pittsburgh Medical Center, Pittsburgh, PA, USA
| | - Thomas P Lodise
- Albany College of Pharmacy and Health Sciences. Albany, NY, USA
| | - George L Drusano
- Professor of Medicine, Director, Institute for Therapeutic Innovation at University of Florida, Orlando, FL, USA
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22
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Kolbe-Busch S, Djouela Djoulako PD, Stingu CS. Trends in Healthcare-Acquired Infections Due to Multidrug-Resistant Organisms at a German University Medical Center Before and During the COVID-19 Pandemic. Microorganisms 2025; 13:274. [PMID: 40005641 PMCID: PMC11858357 DOI: 10.3390/microorganisms13020274] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2025] [Revised: 01/15/2025] [Accepted: 01/22/2025] [Indexed: 02/27/2025] Open
Abstract
BACKGROUND Healthcare-acquired infections due to multidrug-resistant organisms (MDR-HAIs) pose globally significant challenges to healthcare systems, leading to increased morbidity, mortality, and healthcare costs. According to the World Health Organization, the COVID-19 pandemic significantly impacted the burden of MDR-HAIs. The aim of this study was to investigate the dynamics and epidemiology of MDR-HAIs in inpatients at the University of Leipzig Medical Center (ULMC) before and during the COVID-19 pandemic. METHODS We compared data from inpatients with bacterial infections from 2017 to 2019 (pre-COVID-19) and from 2021to 2023 (during COVID-19) in a cross-sectional, monocentric, retrospective survey. This study focused on selected multidrug-resistant organisms (MDROs) and four clinical specimens. We analyzed the risk factors for MDR-HAIs using logistic regression models. RESULTS Out of 342,705 inpatients, 32,206 were diagnosed with a bacterial infection. The prevalence increased significantly from 8.09% (pre-COVID-19) to 10.79% (during COVID-19) (p < 0.001), but the proportion of MDROs decreased from 10.14% to 8.07%. The proportions of MDR-HAIs were 59.86% and 56.67%, respectively. The proportion of carbapenem-resistant Klebsiella pneumoniae and Enterobacter cloacae increased significantly. The risk of MDR-HAIs during COVID-19 decreased by 18% compared to pre-COVID-19 (p = 0.047). Longer hospital stays increased the risk of MDR-HAIs in both periods. This risk significantly decreased for children and the elderly during COVID-19. CONCLUSION These findings show that it is also important to analyze epidemiological data at the facility level in order to evaluate the effectiveness of infection control practices even during unprecedented health crises like the COVID-19 pandemic.
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Affiliation(s)
- Susanne Kolbe-Busch
- Institute of Hygiene, Hospital Epidemiology and Environmental Medicine, University of Leipzig Medical Center, 04103 Leipzig, Germany; (S.K.-B.); (P.D.D.D.)
| | - Paule Dana Djouela Djoulako
- Institute of Hygiene, Hospital Epidemiology and Environmental Medicine, University of Leipzig Medical Center, 04103 Leipzig, Germany; (S.K.-B.); (P.D.D.D.)
- Institut Pasteur/Cnam (Conservatoire National des Arts et Métiers), 75015 Paris, France
- Institute for Medical Microbiology and Virology, University of Leipzig Medical Center, 04103 Leipzig, Germany
| | - Catalina-Suzana Stingu
- Institute for Medical Microbiology and Virology, University of Leipzig Medical Center, 04103 Leipzig, Germany
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23
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Antonie NI, Gheorghe G, Ionescu VA, Tiucă LC, Diaconu CC. The Role of ChatGPT and AI Chatbots in Optimizing Antibiotic Therapy: A Comprehensive Narrative Review. Antibiotics (Basel) 2025; 14:60. [PMID: 39858346 PMCID: PMC11761957 DOI: 10.3390/antibiotics14010060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2024] [Revised: 01/03/2025] [Accepted: 01/07/2025] [Indexed: 01/27/2025] Open
Abstract
Background/Objectives: Antimicrobial resistance represents a growing global health crisis, demanding innovative approaches to improve antibiotic stewardship. Artificial intelligence (AI) chatbots based on large language models have shown potential as tools to support clinicians, especially non-specialists, in optimizing antibiotic therapy. This review aims to synthesize current evidence on the capabilities, limitations, and future directions for AI chatbots in enhancing antibiotic selection and patient outcomes. Methods: A narrative review was conducted by analyzing studies published in the last five years across databases such as PubMed, SCOPUS, Web of Science, and Google Scholar. The review focused on research discussing AI-based chatbots, antibiotic stewardship, and clinical decision support systems. Studies were evaluated for methodological soundness and significance, and the findings were synthesized narratively. Results: Current evidence highlights the ability of AI chatbots to assist in guideline-based antibiotic recommendations, improve medical education, and enhance clinical decision-making. Promising results include satisfactory accuracy in preliminary diagnostic and prescriptive tasks. However, challenges such as inconsistent handling of clinical nuances, susceptibility to unsafe advice, algorithmic biases, data privacy concerns, and limited clinical validation underscore the importance of human oversight and refinement. Conclusions: AI chatbots have the potential to complement antibiotic stewardship efforts by promoting appropriate antibiotic use and improving patient outcomes. Realizing this potential will require rigorous clinical trials, interdisciplinary collaboration, regulatory clarity, and tailored algorithmic improvements to ensure their safe and effective integration into clinical practice.
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Affiliation(s)
- Ninel Iacobus Antonie
- Faculty of Medicine, University of Medicine and Pharmacy Carol Davila Bucharest, 050474 Bucharest, Romania; (N.I.A.); (V.A.I.); (C.C.D.)
- Internal Medicine Department, Clinical Emergency Hospital of Bucharest, 105402 Bucharest, Romania
| | - Gina Gheorghe
- Faculty of Medicine, University of Medicine and Pharmacy Carol Davila Bucharest, 050474 Bucharest, Romania; (N.I.A.); (V.A.I.); (C.C.D.)
- Internal Medicine Department, Clinical Emergency Hospital of Bucharest, 105402 Bucharest, Romania
| | - Vlad Alexandru Ionescu
- Faculty of Medicine, University of Medicine and Pharmacy Carol Davila Bucharest, 050474 Bucharest, Romania; (N.I.A.); (V.A.I.); (C.C.D.)
- Internal Medicine Department, Clinical Emergency Hospital of Bucharest, 105402 Bucharest, Romania
| | - Loredana-Crista Tiucă
- Faculty of Medicine, University of Medicine and Pharmacy Carol Davila Bucharest, 050474 Bucharest, Romania; (N.I.A.); (V.A.I.); (C.C.D.)
- Internal Medicine Department, Clinical Emergency Hospital of Bucharest, 105402 Bucharest, Romania
| | - Camelia Cristina Diaconu
- Faculty of Medicine, University of Medicine and Pharmacy Carol Davila Bucharest, 050474 Bucharest, Romania; (N.I.A.); (V.A.I.); (C.C.D.)
- Internal Medicine Department, Clinical Emergency Hospital of Bucharest, 105402 Bucharest, Romania
- Academy of Romanian Scientists, 050045 Bucharest, Romania
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24
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Iovleva A, Fowler VG, Doi Y. Treatment Approaches for Carbapenem-Resistant Acinetobacter baumannii Infections. Drugs 2025; 85:21-40. [PMID: 39607595 PMCID: PMC11950131 DOI: 10.1007/s40265-024-02104-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/22/2024] [Indexed: 11/29/2024]
Abstract
Carbapenem-resistant Acinetobacter baumannii has been associated with over three hundred thousand annual deaths globally. It is resistant to most available antibiotics and associated with high morbidity and mortality. No global consensus currently exists for treatment strategies that balance safety and efficacy because of heterogeneity of treatment regimens in current clinical practice and scarcity of large-scale controlled studies arising from difficulties in establishing robust clinical outcomes. This review outlines the epidemiology and resistance mechanisms of carbapenem-resistant A. baumannii, then summarizes available clinical data on each approved agent with activity against this pathogen. Emerging treatment options such as cefiderocol and sulbactam-durlobactam show promise, but their success hinges on comprehensive clinical validation and access in regions most impacted by this pathogen. New therapeutic modalities that are in various stages of clinical development are also discussed.
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Affiliation(s)
- Alina Iovleva
- Center for Innovative Antimicrobial Therapy, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA
| | - Vance G Fowler
- Department of Medicine, Duke University School of Medicine, Durham, NC, USA
- Duke Clinical Research Institute, Durham, NC, USA
| | - Yohei Doi
- Center for Innovative Antimicrobial Therapy, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
- Departments of Microbiology and Infectious Diseases, Fujita Health University, Toyoake, Aichi, Japan.
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25
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Que AT, Tran AD, Trang THN, Tran TNL, Bui NN, Lai CH. Epidemiology and antimicrobial resistance patterns of urinary tract infection: insights and strategies from a 5-year serial cross-sectional study in Vietnam. Ther Adv Infect Dis 2025; 12:20499361251315346. [PMID: 40027950 PMCID: PMC11869312 DOI: 10.1177/20499361251315346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2024] [Accepted: 01/07/2025] [Indexed: 03/05/2025] Open
Abstract
Background Urinary tract infection (UTI) is one of the most common bacterial infections in clinical practice. Given the rapid increase in antimicrobial resistance and the scarcity of new antibiotics, along with the absence of individual antibiogram testing in some countries, there is an urgent need for robust surveillance systems. Objective This study aimed to provide evidence for the surveillance of resistance, a crucial component in developing national UTI treatment guidelines and guiding empirical therapy decisions. Design This study utilized a retrospective, serial cross-sectional design. Methods Antimicrobial surveillance was conducted using data collected from January 1, 2017 to December 31, 2021. A total of 2595 patients with UTIs were recruited for this study. From these patients, 2004 bacterial isolates were identified and subjected to epidemiological and antibiotic resistance analyses. Results Escherichia coli (E. coli, 42.7%), Pseudomonas aeruginosa (P. aeruginosa, 11.9%), and Klebsiella pneumoniae (K. pneumoniae, 10.9%) were identified as the predominant causes of UTIs. E. coli isolates demonstrated a high level of sensitivity (80%-90%) to carbapenems (imipenem, ertapenem, and meropenem), aminoglycosides (amikacin), piperacillin/tazobactam, cefoperazone/sulbactam, and fosfomycin. The antibiotic resistance rates of K. pneumoniae strains consistently exceeded 50%, except for amikacin, ertapenem, imipenem, meropenem, and fosfomycin. Notably, all K. pneumoniae strains isolated from patients with UTIs were resistant to ampicillin. During the coronavirus disease pandemic, the E. coli and K. pneumoniae isolates exhibited reduced antibiotic resistance compared to the pre-pandemic period. The resistance rate of P. aeruginosa isolates remained consistently high (60%-70%). Conclusion Amikacin, ertapenem, imipenem, meropenem, and fosfomycin are promising treatment options for enterobacterial UTIs. However, their efficacy against P. aeruginosa is limited. This study revealed alarmingly high rates of primary etiological pathogen resistance to commonly prescribed empirical therapies for UTIs. These findings provide crucial data for optimizing national guidelines and implementing personalized treatment strategies to enhance the effectiveness of UTI treatments.
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Affiliation(s)
- Anh Tram Que
- Department of Medical Laboratory, Infectious Disease Research Center, Nghe An Friendship General Hospital, Vinh, Nghe An, Vietnam
| | - Anh Dao Tran
- Department of Medical Laboratory, Infectious Disease Research Center, Nghe An Friendship General Hospital, Vinh, Nghe An, Vietnam
| | | | - Thi Nhu Le Tran
- Faculty of Medicine, Can Tho University of Medicine and Pharmacy, Can Tho, Vietnam
| | - Ngoc-Niem Bui
- Faculty of Medicine, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam
- Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan
| | - Chih-Ho Lai
- Department of Medical Research, School of Medicine, China Medical University and Hospital, Taichung 404328, Taiwan
- Department of Nursing, Asia University, Taichung 413305, Taiwan
- Department of Pediatrics, Molecular Infectious Disease Research Center, Chang Gung Memorial Hospital at Linkou, Taoyuan 333423, Taiwan
- Research Center for Emerging Viral Infections, Chang Gung University, Taoyuan 333323, Taiwan
- Department of Microbiology and Immunology, Chang Gung University, Taoyuan, 33302, Taiwan
- Center for the Molecular and Clinical Immunology, Institute of Immunology and Translational Medicine, Chang Gung University, Taoyuan 333323, Taiwan
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26
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Bittencourt AA, Faustino VL, Batista PDM, Leonel LP, de Paula MDN, Polis TJ. Activity of ceftolozane/tazobactam and comparators against gram-negative bacilli: Results from the Study for Monitoring Antimicrobial Resistance Trends (SMART - Brazil), 2018‒2021. Braz J Infect Dis 2025; 29:104497. [PMID: 39667188 PMCID: PMC11699052 DOI: 10.1016/j.bjid.2024.104497] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2024] [Accepted: 12/02/2024] [Indexed: 12/14/2024] Open
Abstract
Increased spread of antimicrobial resistance by Gram-Negative Bacilli (GNB) poses a global challenge, with exacerbated burden post-pandemic. The aim of this study was to investigate the in vitro activity of ceftolozane/tazobactam and its comparators against the frequently identified GNB isolated from patients admitted to Brazilian medical sites between the year 2018‒2019 and 2020‒2021. The impact of pandemic on antimicrobial resistance and presence of β-lactamase genes were also evaluated. Antimicrobial susceptibility testing and molecular characterization of ß-lactamase encoding genes using Polymerase Chain Reaction (PCR) and DNA sequencing were carried out from GNB isolated mostly from intra-abdominal, respiratory, and urinary tract infections and interpreted following BrCAST/EUCAST guidelines. A total of 3994 GNB isolates were evaluated which mostly included E. coli, K. pneumoniae and P. aeruginosa. Ceftolozane/tazobactam remained highly active against E. coli isolates during both 2018‒2019 (96.0 %) and 2020‒2021 (98.5 %). Among K. pneumoniae, ceftolozane/tazobactam (47.6 % and 43.0 % susceptible during 2018‒2019 and 2020‒2021, respectively) showed poor activity due to blaKPC-2. Colistin and ceftolozane/tazobactam were the most active β-lactam agents tested against P. aeruginosa in 2018‒2019 (99.3 % and 88.8 %) and 2020‒2021 (100 % and 92.8 %), including ceftazidime and meropenem resistant isolates. β-lactamase encoding gene characterization was carried out and both carbapenemases and Extended-Spectrum β-Lactamase (ESBL) producers were found in E. coli, K. pneumoniae and P. aeruginosa isolates. Ceftolozane/tazobactam documented remarkable in vitro activity against E. coli and P. aeruginosa isolates in Brazil, both pre- and post-pandemic periods and could constitute an effective therapeutic option for the treatment of urinary tract infections, intra-abdominal infections, and respiratory tract infections.
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Affiliation(s)
| | | | | | | | | | - Thales José Polis
- Global Medical & Scientific Affairs (GMSA), MSD Brazil, São Paulo, SP, Brazil
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Hui DSC, Yeboah-Manu D, Nachega JB, Rodriguez-Morales AJ, Traore T, Maeurer M, Ippolito G, Zumla A, Ahmed R, Dar O, Kamarulzaman A, Zumla A. 5 years of COVID-19: equity must lead the next pandemic response in a fractured multipolar world. THE LANCET. RESPIRATORY MEDICINE 2025; 13:11-14. [PMID: 39608386 DOI: 10.1016/s2213-2600(24)00382-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2024] [Revised: 11/13/2024] [Accepted: 11/13/2024] [Indexed: 11/30/2024]
Affiliation(s)
- David S C Hui
- Department of Medicine and Therapeutics, and SH Ho Research Center for Infectious Diseases, The Chinese University of Hong Kong, Shatin, Hong Kong Special Administrative Region, China
| | - Dorothy Yeboah-Manu
- Department of Bacteriology, Noguchi Memorial Institute for Medical Research, University of Ghana, Accra, Ghana
| | - Jean B Nachega
- Departments of Epidemiology, Infectious Diseases and Microbiology, University of Pittsburgh School of Public Health, Pittsburgh, PA, USA; Department of Medicine, Division of Infectious Diseases, Stellenbosch University, Cape Town, South Africa
| | - Alfonso J Rodriguez-Morales
- Faculty of Health Sciences, Universidad Científica del Sur, Lima, Peru; Gilbert and Rose-Marie Chagoury School of Medicine, Lebanese American University, Beirut, Lebanon
| | - Tieble Traore
- WHO Emergencies Preparedness and Response, World Health Organization Regional Office for Africa-Dakar Hub, Dakar, Senegal
| | - Markus Maeurer
- Champalimaud Foundation, Champalimaud Centre for the Unknown, Lisbon, Portugal; Johannes Gutenberg University, Medizinische Klinik, Mainz, Germany
| | | | - Adam Zumla
- Royal Bolton Hospital, Bolton NHS Foundation Trust, Bolton, Greater Manchester, UK
| | - Rizwan Ahmed
- Royal Bolton Hospital, Bolton NHS Foundation Trust, Bolton, Greater Manchester, UK
| | - Osman Dar
- Global Operations, UK Health Security Agency, London, UK; Chatham House, Royal Institute of International Affairs, London, UK
| | - Adeeba Kamarulzaman
- Department of Medicine, Faculty of Medicine, University Malaya, Kuala Lumpur, Malaysia; Monash University Malaysia, Subang Jaya, Malaysia
| | - Alimuddin Zumla
- Division of Infection and Immunity, Center for Clinical Microbiology, University College London, London NW3 2PF, UK; NIHR Biomedical Research Centre, UCL Hospitals NHS Foundation Trust, London UK.
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Ma ESK, Wong SC, Cheng VCC, Chen H, Wu P. Lessons Learned from COVID-19 Pandemic in Combating Antimicrobial Resistance-Experience of Hong Kong, China. Microorganisms 2024; 12:2635. [PMID: 39770837 PMCID: PMC11678779 DOI: 10.3390/microorganisms12122635] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2024] [Revised: 12/09/2024] [Accepted: 12/16/2024] [Indexed: 01/11/2025] Open
Abstract
The world has gone through the COVID-19 pandemic and has now returned to normalcy. We reviewed the strategies and public health actions conducted in Hong Kong during the COVID-19 pandemic, and reflected on the lessons learned, which are potentially useful in the fight against antimicrobial resistance (AMR). We recommended extending wastewater surveillance for AMR, apart from SARS-CoV2. We suggested exploring the use of rapid tests in outpatients to aid clinical diagnosis and reduce antibiotic use for viral infections. Stringent infection control measures are crucial to prevent nosocomial transmission of resistant microorganisms, such as vancomycin-resistant enterococci and carbapenemase-producing Enterobacterales in hospitals and in elderly homes. Taking COVID-19 experiences as a reference, transparent data, the prompt dissemination of information, and strategic risk communication should be adopted to maintain sustained behavioral changes in AMR. We also encouraged the adoption of information technology, artificial intelligence, and machine learning in antimicrobial stewardship programs. We also discussed the potential merits and limitations of these strategies. The lessons learned from the COVID-19 pandemic may provide insights into the long battle against AMR.
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Affiliation(s)
- Edmond Siu-Keung Ma
- Infection Control Branch, Centre for Health Protection, Department of Health, Hong Kong, China;
| | - Shuk-Ching Wong
- Infection Control Team, Queen Mary Hospital, Hong Kong West Cluster, Hong Kong, China; (S.-C.W.); (V.C.-C.C.)
- Department of Microbiology, School of Clinical Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China
| | - Vincent Chi-Chung Cheng
- Infection Control Team, Queen Mary Hospital, Hong Kong West Cluster, Hong Kong, China; (S.-C.W.); (V.C.-C.C.)
- Department of Microbiology, School of Clinical Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China
- Department of Microbiology, Queen Mary Hospital, Hong Kong, China
| | - Hong Chen
- Infection Control Branch, Centre for Health Protection, Department of Health, Hong Kong, China;
| | - Peng Wu
- World Health Organization Collaborating Centre for Infectious Disease Epidemiology and Control, School of Public Health, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China;
- Laboratory of Data Discovery for Health (D24H), Hong Kong Science and Technology Park, Hong Kong, China
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Leibovici L, Friedman J. Clinical Microbiology and Infection: how did we do in 2023? Clin Microbiol Infect 2024; 30:1489-1491. [PMID: 38992432 DOI: 10.1016/j.cmi.2024.07.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2024] [Accepted: 07/03/2024] [Indexed: 07/13/2024]
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Allel K, Peters A, Haghparast-Bidgoli H, Spencer-Sandino M, Conejeros J, Garcia P, Pouwels KB, Yakob L, Munita JM, Undurraga EA. Excess burden of antibiotic-resistant bloodstream infections: evidence from a multicentre retrospective cohort study in Chile, 2018-2022. LANCET REGIONAL HEALTH. AMERICAS 2024; 40:100943. [PMID: 39605961 PMCID: PMC11600772 DOI: 10.1016/j.lana.2024.100943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 10/13/2024] [Accepted: 10/25/2024] [Indexed: 11/29/2024]
Abstract
Background Antibiotic-resistant bloodstream infections (ARB BSI) cause an enormous disease and economic burden. We assessed the impact of ARB BSI caused by high- and critical-priority pathogens in hospitalised Chilean patients compared to BSI caused by susceptible bacteria. Methods We conducted a retrospective cohort study from 2018 to 2022 in three Chilean hospitals and measured the association of ARB BSI with in-hospital mortality, length of hospitalisation (LOS), and intensive care unit (ICU) admission. We focused on BSI caused by Acinetobacter baumannii, Enterobacterales, Staphylococcus aureus, Enterococcus species, and Pseudomonas aeruginosa. We addressed confounding using propensity scores, inverse probability weighting, and multivariate regressions. We stratified by community- and hospital-acquired BSI and assessed total hospital and productivity costs. Findings We studied 1218 adult patients experiencing 1349 BSI episodes, with 47.3% attributed to ARB. Predominant pathogens were Staphylococcus aureus (33% Methicillin-resistant 'MRSA'), Enterobacterales (50% Carbapenem-resistant 'CRE'), and Pseudomonas aeruginosa (65% Carbapenem-resistant 'CRPA'). Approximately 80% of BSI were hospital-acquired. ARB was associated with extended LOS (incidence risk ratio IRR = 1.14, 95% CI = 1.05-1.24), increased ICU admissions (odds ratio OR = 1.25; 1.07-1.46), and higher mortality (OR = 1.42, 1.20-1.68) following index blood culture across all BSI episodes. In-hospital mortality risk, adjusted for time-varying and fixed confounders, was 1.35-fold higher (1.16-1.58) for ARB patients, with higher hazard ratios for hospital-acquired MRSA and CRE at 1.37 and 1.48, respectively. Using a societal perspective and a 5% discount rate, we estimated excess costs for ARB at $12,600 per patient, with an estimated annual excess burden of 2270 disability-adjusted life years (DALYs) and $9.6 (5.0-16.4) million. Interpretation It is urgent to develop and implement interventions to reduce the burden of ARB BSIs, particularly from MRSA and CRE. Funding Agencia Nacional de Investigación y Desarrollo ANID, Chile.
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Affiliation(s)
- Kasim Allel
- Health Economics Research Centre, Nuffield Department of Population Health, University of Oxford, Oxford, UK
- Institute for Global Health, University College London, London, UK
- Department of Infectious Diseases, School of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Anne Peters
- Multidisciplinary Initiative for Collaborative Research on Bacterial Resistance (MICROB-R), Santiago, Chile
- Genomics and Resistant Microbes (GeRM), Facultad de Medicina Clínica Alemana, Instituto de Ciencias e Innovación en Medicina (ICIM), Universidad del Desarrollo, Santiago, Chile
| | | | - Maria Spencer-Sandino
- Multidisciplinary Initiative for Collaborative Research on Bacterial Resistance (MICROB-R), Santiago, Chile
- Genomics and Resistant Microbes (GeRM), Facultad de Medicina Clínica Alemana, Instituto de Ciencias e Innovación en Medicina (ICIM), Universidad del Desarrollo, Santiago, Chile
| | - Jose Conejeros
- Department of Infectious Diseases, School of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile
- Escuela de Gobierno, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Patricia Garcia
- Multidisciplinary Initiative for Collaborative Research on Bacterial Resistance (MICROB-R), Santiago, Chile
- Departamento de Laboratorios Clínicos, Escuela de Medicina, Facultad de Medicina, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Koen B. Pouwels
- Health Economics Research Centre, Nuffield Department of Population Health, University of Oxford, Oxford, UK
- The National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance at the University of Oxford, Oxford, UK
| | - Laith Yakob
- Disease Control Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, UK
| | - Jose M. Munita
- Multidisciplinary Initiative for Collaborative Research on Bacterial Resistance (MICROB-R), Santiago, Chile
- Genomics and Resistant Microbes (GeRM), Facultad de Medicina Clínica Alemana, Instituto de Ciencias e Innovación en Medicina (ICIM), Universidad del Desarrollo, Santiago, Chile
- Hospital Padre Hurtado, Santiago, Chile
| | - Eduardo A. Undurraga
- Multidisciplinary Initiative for Collaborative Research on Bacterial Resistance (MICROB-R), Santiago, Chile
- Escuela de Gobierno, Pontificia Universidad Católica de Chile, Santiago, Chile
- Centro de Investigación para la Gestión Integrada del Riesgo de Desastres (CIGIDEN), Santiago, Chile
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Matuluko A, Ness V, Macdonald J, Sneddon J, Seaton RA, Currie K. The impact of the COVID-19 pandemic on the antimicrobial stewardship workforce in Scottish acute care hospitals-a qualitative study. JAC Antimicrob Resist 2024; 6:dlae199. [PMID: 39669662 PMCID: PMC11635100 DOI: 10.1093/jacamr/dlae199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2024] [Accepted: 11/24/2024] [Indexed: 12/14/2024] Open
Abstract
Background Antimicrobial stewardship (AMS) programmes seek to reduce the risk of antimicrobial resistance by minimizing inappropriate antimicrobial use. The SARS-CoV-2 coronavirus (COVID-19) pandemic was characterized by initial widespread use of antimicrobials in patients with COVID-19, with potential negative effects on AMS efforts. Objective To explore the impact of the pandemic on the AMS workforce in Scottish acute care hospitals. Method Individual, semi-structured online interviews were conducted with a purposive sample of clinical staff who had an AMS focused role in Scottish Health Boards. Interviews explored staff experiences of facilitating AMS during the pandemic. Data were analysed using inductive content analysis. Results Thirteen staff from seven of 15 Scotland Health Boards participated. The data revealed negative (including staff redeployment and shortages) and positive effects (including improved working relationships and use of technology) on the AMS workforce. Notably, greater appreciation of the work of the AMS team was a positive outcome. Conclusions The robust qualitative methods applied in this original study have generated greater understanding of factors that impeded AMS services in Scotland during the pandemic. These findings may resonate internationally. Adaptation to technology and investment in the workforce are recommended to improve the resilience of AMS services in future crises.
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Affiliation(s)
- Ayodeji Matuluko
- Research Centre for Health, Glasgow Caledonian University, Cowcaddens Road, Glasgow G4 0BA, UK
| | - Valerie Ness
- Research Centre for Health, Glasgow Caledonian University, Cowcaddens Road, Glasgow G4 0BA, UK
| | - Jennifer Macdonald
- Research Centre for Health, Glasgow Caledonian University, Cowcaddens Road, Glasgow G4 0BA, UK
| | - Jacqueline Sneddon
- Scottish Antimicrobial Prescribing Group, Healthcare Improvement Scotland, Glasgow, UK
- British Society for Antimicrobial Chemotherapy, Birmingham, UK
| | - Ronald Andrew Seaton
- Scottish Antimicrobial Prescribing Group, Healthcare Improvement Scotland, Glasgow, UK
- British Society for Antimicrobial Chemotherapy, Birmingham, UK
- Queen Elizabeth University Hospital, NHS Greater Glasgow and Clyde, Glasgow, UK
| | - Kay Currie
- Research Centre for Health, Glasgow Caledonian University, Cowcaddens Road, Glasgow G4 0BA, UK
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Petrova A. First detected Proteus mirabilis co-harbouring VIM-1, VIM-2, and VIM-13 from the largest Bulgarian hospital. J Hosp Infect 2024; 154:132-133. [PMID: 39307425 DOI: 10.1016/j.jhin.2024.09.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2024] [Revised: 09/05/2024] [Accepted: 09/10/2024] [Indexed: 10/11/2024]
Affiliation(s)
- A Petrova
- Department of Medical Microbiology and Immunology 'Prof. Dr. EliseyYanev', Medical University Plovdiv, Plovdiv, Bulgaria; Laboratory of Microbiology, University Hospital 'St. George' Plovdiv, Plovdiv, Bulgaria.
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Li L, Zhou Y, Ye L, Xie Z. Tracing the Evolution: A Comprehensive Bibliometric Analysis of Drug Interaction Clinical Studies. J Clin Pharmacol 2024; 64:1505-1516. [PMID: 39141439 DOI: 10.1002/jcph.6112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2024] [Accepted: 07/22/2024] [Indexed: 08/16/2024]
Abstract
This study aims to meticulously map the bibliometric landscape of drug-drug interactions (DDIs) in clinical research. This represents the first use of bibliometric analysis to comprehensively highlight the evolutionary trends and core themes in this critical field of pharmacology. An exhaustive bibliometric search was performed within the Web of Science Core Collection, aiming to comprehensively gather literature on DDIs in clinical settings. A combination of sophisticated analytical tools including DIKW, VOSviewer, and Citespace was utilized for an in-depth exploration of bibliometric patterns and trends. Of the 3421 initially identified articles, 2622 were considered relevant. The analysis revealed a marked escalation in DDIs publications, with a peak observed in 2020. Five principal thematic clusters emerged: Safety and Adverse Reactions, Drug Metabolism and Efficacy, Disease and Drug Treatment, Research Methods and Practices, and Special Populations and Combined Medication. Key insights included the escalating significance of drug metabolism in pharmacokinetics, heightened focus on cardiovascular and antiviral therapeutics, and the advancing frontier of personalized medicine. Additionally, the analysis underscored the necessity for strategic attention to vulnerable populations and innovative methodological approaches. This study calls for the global harmonization of research methods in DDIs clinical investigations, advocating for the integration of personalized medicine paradigms and the implementation of cutting-edge computational analytics. It highlights the imperative for inclusive and collaborative research approaches to adeptly address the intricate challenges of contemporary pharmacotherapy.
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Affiliation(s)
- Lanping Li
- Phase I Clinical Trial Center, The Second Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
| | - Yushi Zhou
- Phase I Clinical Trial Center, The Second Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
| | - Lika Ye
- Phase I Clinical Trial Center, The Second Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
| | - Zhihong Xie
- Phase I Clinical Trial Center, The Second Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
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Frolov NA, Seferyan MA, Detusheva EV, Son E, Kolmakov IG, Kartseva AS, Firstova VV, Vereshchagin AN, Elinson MN. Development of Naphthalene-Derivative Bis-QACs as Potent Antimicrobials: Unraveling Structure-Activity Relationship and Microbiological Properties. Molecules 2024; 29:5526. [PMID: 39683689 DOI: 10.3390/molecules29235526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2024] [Revised: 11/08/2024] [Accepted: 11/18/2024] [Indexed: 12/18/2024] Open
Abstract
While the pandemic is behind us, the world community faces a global threat of bacterial resistance outbreak. One of the key ways to combat the spread of multi-resistant bacteria is infection prevention and control tactics using modern antiseptic and disinfectant compositions. Herein, we continue the path to unravel the structure-activity relationship (SAR) of potent pyridine-derived biocide class bis-quaternary ammonium compounds (QACs). In this study, twenty dihydroxynaphthalene-derivative bis-QACs were subjected to extensive microbiological analysis on planktonic cells and biofilms of the ESKAPE microorganisms. Among them, hit compounds were superior in their bacteriostatic and bactericidal action to commercial mono-QACs and were comparable to the best bis-QAC antiseptic on the market. SAR analysis indicated that the linker conformation does not significantly affect the activity, though structure symmetry and especially lipophilicity had an influence on antibacterial performance. Furthermore, we delve deeper in investigation of the antimicrobial potential of bis-QACs and conducted a variety of assays, including time-kill kinetics, bacterial resistance formation, cell morphology, and cytotoxicity. Studies showed promising results for compounds 5d and 6d, indicating 2 to 3-fold less cytotoxicity and hemotoxicity compared to commercial QACs. Moreover, SEM imaging revealed that bis-QACs can cause severe membrane damage to S. aureus and P. aeruginosa strains, confirming great potential of novel compounds as antiseptic and disinfectant.
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Affiliation(s)
- Nikita A Frolov
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, 119991 Moscow, Russia
| | - Mary A Seferyan
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, 119991 Moscow, Russia
| | - Elena V Detusheva
- State Research Center for Applied Microbiology and Biotechnology, Obolensk, 142279 Serpukhov, Russia
| | - Elizabeth Son
- State Research Center for Applied Microbiology and Biotechnology, Obolensk, 142279 Serpukhov, Russia
| | - Ilya G Kolmakov
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, 119991 Moscow, Russia
- Faculty of Chemistry, Lomonosov Moscow State University, Leninskie Gory, 1-3, 119991 Moscow, Russia
| | - Alena S Kartseva
- State Research Center for Applied Microbiology and Biotechnology, Obolensk, 142279 Serpukhov, Russia
| | - Victoria V Firstova
- State Research Center for Applied Microbiology and Biotechnology, Obolensk, 142279 Serpukhov, Russia
| | - Anatoly N Vereshchagin
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, 119991 Moscow, Russia
| | - Michail N Elinson
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, 119991 Moscow, Russia
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Caioni G, Reyes CP, Laurenti D, Chiaradia C, Dainese E, Mattioli R, Di Risola D, Santavicca E, Francioso A. Biochemistry and Future Perspectives of Antibiotic Resistance: An Eye on Active Natural Products. Antibiotics (Basel) 2024; 13:1071. [PMID: 39596764 PMCID: PMC11591525 DOI: 10.3390/antibiotics13111071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2024] [Revised: 10/31/2024] [Accepted: 11/05/2024] [Indexed: 11/29/2024] Open
Abstract
Antibiotic resistance poses a serious threat to the current healthcare system, negatively impacting the effectiveness of many antimicrobial treatments. The situation is exacerbated by the widespread overuse and abuse of available antibiotics, accelerating the evolution of resistance. Thus, there is an urgent need for novel approaches to therapy to overcome established resistance mechanisms. Plants produce molecules capable of inhibiting bacterial growth in various ways, offering promising paths for the development of alternative antibiotic medicine. This review emphasizes the necessity of research efforts on plant-derived chemicals in the hopes of finding and creating novel drugs that can successfully target resistant bacterial populations. Investigating these natural chemicals allows us to improve our knowledge of novel antimicrobial pathways and also expands our antibacterial repertoire with novel molecules. Simultaneously, it is still necessary to utilize present antibiotics sparingly; prudent prescribing practices must be encouraged to extend the effectiveness of current medications. The combination of innovative drug research and responsible drug usage offers an integrated strategy for managing the antibiotic resistance challenge.
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Affiliation(s)
- Giulia Caioni
- Department of Bioscience and Technology for Food Agriculture and Environment, University of Teramo, 64100 Teramo, Italy; (G.C.); (E.D.)
| | - Carolina Pérez Reyes
- Department of Biochemistry, Microbiology, Cell Biology and Genetics, Instituto Universitario de Bio-Orgánica “Antonio González”, University of La Laguna, 38206 San Cristobal de La Laguna, Spain;
| | - Davide Laurenti
- Department of Biochemical Sciences “A. Rossi Fanelli”, Sapienza University of Rome, 00185 Rome, Italy; (D.L.); (C.C.); (R.M.); (D.D.R.)
| | - Carmen Chiaradia
- Department of Biochemical Sciences “A. Rossi Fanelli”, Sapienza University of Rome, 00185 Rome, Italy; (D.L.); (C.C.); (R.M.); (D.D.R.)
| | - Enrico Dainese
- Department of Bioscience and Technology for Food Agriculture and Environment, University of Teramo, 64100 Teramo, Italy; (G.C.); (E.D.)
| | - Roberto Mattioli
- Department of Biochemical Sciences “A. Rossi Fanelli”, Sapienza University of Rome, 00185 Rome, Italy; (D.L.); (C.C.); (R.M.); (D.D.R.)
| | - Daniel Di Risola
- Department of Biochemical Sciences “A. Rossi Fanelli”, Sapienza University of Rome, 00185 Rome, Italy; (D.L.); (C.C.); (R.M.); (D.D.R.)
| | | | - Antonio Francioso
- Department of Bioscience and Technology for Food Agriculture and Environment, University of Teramo, 64100 Teramo, Italy; (G.C.); (E.D.)
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Grygiel I, Bajrak O, Wójcicki M, Krusiec K, Jończyk-Matysiak E, Górski A, Majewska J, Letkiewicz S. Comprehensive Approaches to Combatting Acinetobacter baumannii Biofilms: From Biofilm Structure to Phage-Based Therapies. Antibiotics (Basel) 2024; 13:1064. [PMID: 39596757 PMCID: PMC11591314 DOI: 10.3390/antibiotics13111064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2024] [Revised: 11/05/2024] [Accepted: 11/06/2024] [Indexed: 11/29/2024] Open
Abstract
Acinetobacter baumannii-a multidrug-resistant (MDR) pathogen that causes, for example, skin and soft tissue wounds; urinary tract infections; pneumonia; bacteremia; and endocarditis, particularly due to its ability to form robust biofilms-poses a significant challenge in clinical settings. This structure protects the bacteria from immune responses and antibiotic treatments, making infections difficult to eradicate. Given the rise in antibiotic resistance, alternative therapeutic approaches are urgently needed. Bacteriophage-based strategies have emerged as a promising solution for combating A. baumannii biofilms. Phages, which are viruses that specifically infect bacteria, offer a targeted and effective means of disrupting biofilm and lysing bacterial cells. This review explores the current advancements in bacteriophage therapy, focusing on its potential for treating A. baumannii biofilm-related infections. We described the mechanisms by which phages interact with biofilms, the challenges in phage therapy implementation, and the strategies being developed to enhance its efficacy (phage cocktails, engineered phages, combination therapies with antibiotics). Understanding the role of bacteriophages in both biofilm disruption and in inhibition of its forming could pave the way for innovative treatments in combating MDR A. baumannii infections as well as the prevention of their development.
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Affiliation(s)
- Ilona Grygiel
- Bacteriophage Laboratory, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland; (I.G.); (O.B.); (M.W.); (K.K.); (A.G.)
| | - Olaf Bajrak
- Bacteriophage Laboratory, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland; (I.G.); (O.B.); (M.W.); (K.K.); (A.G.)
| | - Michał Wójcicki
- Bacteriophage Laboratory, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland; (I.G.); (O.B.); (M.W.); (K.K.); (A.G.)
| | - Klaudia Krusiec
- Bacteriophage Laboratory, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland; (I.G.); (O.B.); (M.W.); (K.K.); (A.G.)
| | - Ewa Jończyk-Matysiak
- Bacteriophage Laboratory, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland; (I.G.); (O.B.); (M.W.); (K.K.); (A.G.)
| | - Andrzej Górski
- Bacteriophage Laboratory, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland; (I.G.); (O.B.); (M.W.); (K.K.); (A.G.)
- Phage Therapy Unit, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland;
- Professor Emeritus, Department of Immunology, The Medical University of Warsaw, 02-006 Warsaw, Poland
| | - Joanna Majewska
- Department of Pathogen Biology and Immunology, University of Wrocław, 51-148 Wrocław, Poland;
| | - Sławomir Letkiewicz
- Phage Therapy Unit, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wroclaw, Poland;
- Collegium Medicum, Jan Długosz University, 42-200 Częstochowa, Poland
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Jeverica S, Maganja DB, Dernič J, Golob P, Stepišnik A, Novak B, Papst L, Dodič AJ, Gasparini M. The Influence of COVID-19 on Antimicrobial Resistance Trends at a Secondary Care Hospital in Slovenia: An Interrupted Time Series Analysis. Antibiotics (Basel) 2024; 13:1033. [PMID: 39596728 PMCID: PMC11590949 DOI: 10.3390/antibiotics13111033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Revised: 10/27/2024] [Accepted: 10/31/2024] [Indexed: 11/29/2024] Open
Abstract
Background/Objectives. Our study aimed to determine the development of antibiotic resistance during the peri-pandemic period in a regional secondary care hospital using an interrupted time series analysis. Methods. We analyzed data from seven years, accounting for 441,149 patient days. The incidence density of multidrug-resistant bacteria (MDR) burden and infection was reported per 1000 patient days. Results. During the COVID-19 period, a significant increase in the mean incidence density of the total MDR burden from 4.93 to 5.81 per 1000 patient days was observed (p = 0.007). On the other hand, the mean incidence density of MDR infections decreased from 1.61 to 1.29 per 1000 patient days (p = 0.019). Using the interrupted time series analysis, the same trends were observed, namely the overall increasing trend in MDR burden and the overall decreasing trend in MDR infections. This divergent trend is mainly due to similar trends in several Gram-negative MDR, namely ESBL-EC, ESBL-KP and CRE. Conclusions. Due to the increasing burden of MDR, it is necessary to strengthen AMR surveillance. In addition, strict infection prevention and control measures, and antimicrobial stewardship programs continue to be important components in the fight against resistant bacteria.
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Affiliation(s)
- Samo Jeverica
- Izola General Hospital, 6310 Izola, Slovenia; (J.D.); (P.G.); (A.S.); (B.N.); (M.G.)
| | | | - Jani Dernič
- Izola General Hospital, 6310 Izola, Slovenia; (J.D.); (P.G.); (A.S.); (B.N.); (M.G.)
| | - Peter Golob
- Izola General Hospital, 6310 Izola, Slovenia; (J.D.); (P.G.); (A.S.); (B.N.); (M.G.)
| | - Alenka Stepišnik
- Izola General Hospital, 6310 Izola, Slovenia; (J.D.); (P.G.); (A.S.); (B.N.); (M.G.)
| | - Bojan Novak
- Izola General Hospital, 6310 Izola, Slovenia; (J.D.); (P.G.); (A.S.); (B.N.); (M.G.)
| | - Lea Papst
- Department of Infectious Diseases, University Medical Centre Ljubljana, 1000 Ljubljana, Slovenia;
| | - Anamarija Juriševič Dodič
- Department of Medical Microbiology Koper, National Laboratory of Health, Environment and Food, 2000 Maribor, Slovenia;
| | - Mladen Gasparini
- Izola General Hospital, 6310 Izola, Slovenia; (J.D.); (P.G.); (A.S.); (B.N.); (M.G.)
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Zhao X, Zhang Z, Liu L, Wang D, Zhang X, Zhao L, Zhao Y, Jin X, Wang L, Liu X. Guanethidine Enhances the Antibacterial Activity of Rifampicin Against Multidrug-Resistant Bacteria. Microorganisms 2024; 12:2207. [PMID: 39597596 PMCID: PMC11596751 DOI: 10.3390/microorganisms12112207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2024] [Revised: 10/24/2024] [Accepted: 10/28/2024] [Indexed: 11/29/2024] Open
Abstract
The escalating global threat of antibiotic resistance necessitates innovative strategies, such as the combination of antibiotics with adjuvants. Monotherapy with rifampicin is more likely to induce resistance in pathogens compared to other antibiotics. Herein, we found that the antihypertensive drug guanethidine enhanced the activity of rifampicin against certain clinically resistant Gram-negative bacteria, resulting in a reduction of up to 128-fold in the minimum inhibitory concentration. In infected animal models, this combination has achieved treatment benefits, including increased survival and decreased bacterial burden. The antimicrobial mechanism of guanethidine in synergy with rifampicin involves the disruption of the outer membrane of Gram-negative bacteria, leading to dissipation of the proton motive force. This results in an increase in reactive oxygen species and a reduction in ATP synthesis, severely disturbing energy metabolism and ultimately increasing bacterial mortality. In summary, guanethidine has the potential to become a novel adjuvant for rifampicin, offering a new option for the treatment of clinical Gram-negative bacterial infections.
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Affiliation(s)
| | | | | | | | | | | | | | | | - Lei Wang
- Institute of Animal Husbandry and Veterinary Medicine, Jilin Academy of Agricultural Science, Kemao Street No.186, Gongzhuling 136100, China; (X.Z.); (Z.Z.); (L.L.); (D.W.); (X.Z.); (L.Z.); (Y.Z.); (X.J.)
| | - Xiaoxiao Liu
- Institute of Animal Husbandry and Veterinary Medicine, Jilin Academy of Agricultural Science, Kemao Street No.186, Gongzhuling 136100, China; (X.Z.); (Z.Z.); (L.L.); (D.W.); (X.Z.); (L.Z.); (Y.Z.); (X.J.)
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39
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Fallah F, Karimi A, Azimi L, Ghandchi G, Gholinejad Z, Abdollahi N, Oskooie NA, Khodaei H, Armin S, Behzad A, Hashemi SM, Ahmadizadeh SN, Alebouyeh M. The impact of the COVID-19 pandemic on pediatric bloodstream infections and alteration in antimicrobial resistance phenotypes in Gram-positive bacteria, 2020-2022. BMC Pediatr 2024; 24:671. [PMID: 39425109 PMCID: PMC11487802 DOI: 10.1186/s12887-024-05146-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Accepted: 10/10/2024] [Indexed: 10/21/2024] Open
Abstract
BACKGROUND Alteration in the etiology of pediatric bloodstream infections (BSIs) and antimicrobial resistance (AMR) is not well known during the Coronavirus disease 2019 (COVID-19) pandemic. This study aimed to investigate the impact of the COVID-19 pandemic on pediatric BSIs and alteration in antimicrobial resistance phenotypes in Gram-positive bacteria. METHODS The frequency of BSIs among children under 18 years old was retrospectively recorded in a tertiary children's hospital in Tehran, Iran from February 2020 to December 2022. The status of COVID-19 infection using reverse transcription polymerase chain reaction, bacteremia/fungemia according to BACTEC 9120 Culture System results, characterization of bacteria using biochemical tests, and antimicrobial susceptibility patterns for Gram-positive bacterial isolates using disk diffusion method were determined. Statistical analysis was done to measure the correlation of COVID-19 infection with BSIs and AMR. RESULTS Out of 13,345 COVID-19 tests and 4,194 BACTEC blood culture requests, bacteremia/fungemia were confirmed in 10.37% (435/4,194) of the patients who requested both tests simultaneously. The COVID-19 infection was confirmed in 25.3% (110/435) of the patients with bacteremia/fungemia. The infection with characterized Gram-positive bacteria (GPB) and fungi was detected in 32.3% (140/433) and 8.31% (36/433) of the cases, respectively. Coagulase-negative Staphylococcus (CNS, 72, 16.62%), S. aureus (36, 8.3%), and Enterococcus spp. (22, 5%) were among the common isolates. Candida spp. and non-Candida yeasts were detected in 6.7% and 13.4% of the cases, respectively. A positive correlation was shown between the CNS bacteremia and COVID-19 infection (p-value = 0.019). Antibiotic susceptibility testing results showed the highest frequency of resistance to azithromycin among CNS, azithromycin and tetracycline among S. aureus and tetracycline among Enterococcus spp. Methicillin-resistance phenotype in the S. aureus (MRSA) and coagulase-negative Staphylococcus spp. (MR-CNS) was detected in 40% and 61.5% of the strains, respectively and the Enterococci were resistant to vancomycin in 33.3% of the isolates. CONCLUSION A decline in the trend of BSIs by GPB and an increase in AMR was shown in children during the COVID-19 pandemic. Increasing antibiotic resistance is a concern; however, chloramphenicol, linezolid, and vancomycin remain active against common causes of GPB-BSIs.
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Grants
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- IR.SBMU.MSP.REC.1401.060 Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
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Affiliation(s)
- Fatemeh Fallah
- Department of Medical Microbiology, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Abdollah Karimi
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Leila Azimi
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Ghazale Ghandchi
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Zari Gholinejad
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Nafiseh Abdollahi
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Nazanin Ahari Oskooie
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Hannan Khodaei
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Shahnaz Armin
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Azita Behzad
- Pediatric Intensive Care Department, Mofid Children's Hospital, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Seyedeh Masumeh Hashemi
- Pediatric Intensive Care Department, Mofid Children's Hospital, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Seyedeh Narjes Ahmadizadeh
- Pediatric Intensive Care Department, Mofid Children's Hospital, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Masoud Alebouyeh
- Pediatric Infections Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
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Marwick CA, Ciaccio L. Quantifying the impact of COVID-19-related restrictions on antibiotic resistance. Clin Microbiol Infect 2024; 30:1225-1227. [PMID: 39002662 DOI: 10.1016/j.cmi.2024.07.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 07/04/2024] [Accepted: 07/07/2024] [Indexed: 07/15/2024]
Affiliation(s)
- Charis A Marwick
- Division of Population Health and Genomics, School of Medicine, University of Dundee, Dundee, United Kingdom.
| | - Laura Ciaccio
- Division of Population Health and Genomics, School of Medicine, University of Dundee, Dundee, United Kingdom
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Vasileiadi E, Lloyd KM, Fisher BT, Hanisch B. Fluoroquinolone Prophylaxis in Children With Cancer: A Pro/Con Discussion. J Pediatric Infect Dis Soc 2024; 13:486-492. [PMID: 39073450 DOI: 10.1093/jpids/piae077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Accepted: 07/26/2024] [Indexed: 07/30/2024]
Abstract
There are conflicting recommendations on whether to use or not to use fluoroquinolone prophylaxis in pediatric oncology patients. An international pediatric clinical practice guideline (CPG) recommends administering levofloxacin prophylaxis in patients with acute myeloblastic leukemia and relapsed acute lymphoblastic leukemia receiving intensive chemotherapy as this practice has been found to reduce episodes of fever and bacteremia. A separate European CPG does not recommend levofloxacin prophylaxis because of concerns for adverse effects, including potentiation of fluoroquinolone resistance and possible increased resistance to other classes of antibiotics. The nuance of the decision to give or not give prophylaxis is discussed in the context of published evidence defining the risks and benefits of levofloxacin prophylaxis for pediatric leukemia patients at high risk for bacterial infection. Knowledge gaps are also identified to guide further investigations to optimize the use of fluoroquinolone prophylaxis in pediatric patients receiving chemotherapy for cancer or undergoing a hematopoietic cell transplantation.
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Affiliation(s)
- Eleana Vasileiadi
- Division of Infectious Disease, Department of Pediatrics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA
| | - Kevin M Lloyd
- Department of Pediatric Infectious Diseases, Children's National, Washington, District of Columbia, USA
| | - Brian T Fisher
- Division of Infectious Disease, Department of Pediatrics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA
- Department of Biostatistics, Epidemiology and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| | - Benjamin Hanisch
- Department of Pediatric Infectious Diseases, Children's National, Washington, District of Columbia, USA
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Sauvat L, Verhoeven PO, Gagnaire J, Berthelot P, Paul S, Botelho-Nevers E, Gagneux-Brunon A. Vaccines and monoclonal antibodies to prevent healthcare-associated bacterial infections. Clin Microbiol Rev 2024; 37:e0016022. [PMID: 39120140 PMCID: PMC11391692 DOI: 10.1128/cmr.00160-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/10/2024] Open
Abstract
SUMMARYHealthcare-associated infections (HAIs) represent a burden for public health with a high prevalence and high death rates associated with them. Pathogens with a high potential for antimicrobial resistance, such as ESKAPE pathogens (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter species) and Clostridioides difficile, are responsible for most HAIs. Despite the implementation of infection prevention and control intervention, globally, HAIs prevalence is stable and they are mainly due to endogenous pathogens. It is undeniable that complementary to infection prevention and control measures, prophylactic approaches by active or passive immunization are needed. Specific groups at-risk (elderly people, chronic condition as immunocompromised) and also healthcare workers are key targets. Medical procedures and specific interventions are known to be at risk of HAIs, in addition to hospital environmental exposure. Vaccines or monoclonal antibodies can be seen as attractive preventive approaches for HAIs. In this review, we present an overview of the vaccines and monoclonal antibodies in clinical development for prevention of the major bacterial HAIs pathogens. Based on the current state of knowledge, we look at the challenges and future perspectives to improve prevention by these means.
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Affiliation(s)
- Léo Sauvat
- CIRI - Centre International de Recherche en Infectiologie, GIMAP team, Inserm, U1111, CNRS, UMR5308, ENS Lyon, Université Claude Bernard Lyon 1, Lyon, France
- Faculty of Medicine, Université Jean Monnet St-Etienne, St-Etienne, France
- Infection Control Unit, University Hospital of Saint-Etienne, Saint-Etienne, France
- Department of Infectious Diseases, University Hospital of Saint-Etienne, Saint-Etienne, France
| | - Paul O Verhoeven
- CIRI - Centre International de Recherche en Infectiologie, GIMAP team, Inserm, U1111, CNRS, UMR5308, ENS Lyon, Université Claude Bernard Lyon 1, Lyon, France
- Faculty of Medicine, Université Jean Monnet St-Etienne, St-Etienne, France
- Department of Infectious Agents and Hygiene, University-Hospital of Saint-Etienne, Saint-Etienne, France
| | - Julie Gagnaire
- Infection Control Unit, University Hospital of Saint-Etienne, Saint-Etienne, France
- Department of Infectious Diseases, University Hospital of Saint-Etienne, Saint-Etienne, France
| | - Philippe Berthelot
- CIRI - Centre International de Recherche en Infectiologie, GIMAP team, Inserm, U1111, CNRS, UMR5308, ENS Lyon, Université Claude Bernard Lyon 1, Lyon, France
- Faculty of Medicine, Université Jean Monnet St-Etienne, St-Etienne, France
- Infection Control Unit, University Hospital of Saint-Etienne, Saint-Etienne, France
- Department of Infectious Diseases, University Hospital of Saint-Etienne, Saint-Etienne, France
| | - Stéphane Paul
- CIRI - Centre International de Recherche en Infectiologie, GIMAP team, Inserm, U1111, CNRS, UMR5308, ENS Lyon, Université Claude Bernard Lyon 1, Lyon, France
- Faculty of Medicine, Université Jean Monnet St-Etienne, St-Etienne, France
- CIC 1408 Inserm, Axe vaccinologie, University Hospital of Saint-Etienne, Saint-Etienne, France
| | - Elisabeth Botelho-Nevers
- CIRI - Centre International de Recherche en Infectiologie, GIMAP team, Inserm, U1111, CNRS, UMR5308, ENS Lyon, Université Claude Bernard Lyon 1, Lyon, France
- Faculty of Medicine, Université Jean Monnet St-Etienne, St-Etienne, France
- Department of Infectious Diseases, University Hospital of Saint-Etienne, Saint-Etienne, France
- CIC 1408 Inserm, Axe vaccinologie, University Hospital of Saint-Etienne, Saint-Etienne, France
| | - Amandine Gagneux-Brunon
- CIRI - Centre International de Recherche en Infectiologie, GIMAP team, Inserm, U1111, CNRS, UMR5308, ENS Lyon, Université Claude Bernard Lyon 1, Lyon, France
- Faculty of Medicine, Université Jean Monnet St-Etienne, St-Etienne, France
- Department of Infectious Diseases, University Hospital of Saint-Etienne, Saint-Etienne, France
- CIC 1408 Inserm, Axe vaccinologie, University Hospital of Saint-Etienne, Saint-Etienne, France
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Soliman S, Abdalla S, Zedan A, Enany S. Genomic profiling of pan-drug resistant proteus mirabilis Isolates reveals antimicrobial resistance and virulence gene landscape. Funct Integr Genomics 2024; 24:154. [PMID: 39223360 PMCID: PMC11369002 DOI: 10.1007/s10142-024-01419-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 08/06/2024] [Accepted: 08/08/2024] [Indexed: 09/04/2024]
Abstract
Proteus mirabilis is a gram-negative pathogen that caused significant opportunistic infections. In this study we aimed to identify antimicrobial resistance (AMR) genes and virulence determinants in two pan-drug resistant isolate "Bacteria_11" and "Bacteria_27" using whole genome sequencing. Proteus mirabilis "Bacteria_11" and "Bacteria_27" were isolated from two different hospitalized patients in Egypt. Antimicrobial susceptibility determined using Vitek 2 system, then whole genome sequencing (WGS) using MinION nanopore sequencing was done. Antimicrobial resistant genes and virulence determinants were identified using ResFinder, CADR AMR database, Abricate tool and VF analyzer were used respectively. Multiple sequence alignment was performed using MAFFT and FastTree, respectively. All genes were present within bacterial chromosome and no plasmid was detected. "Bacteria_11" and "Bacteria_27" had sizes of approximately 4,128,657 bp and 4,120,646 bp respectively, with GC content of 39.15% and 39.09%. "Bacteria_11" and "Bacteria_27" harbored 43 and 42 antimicrobial resistance genes respectively with different resistance mechanisms, and up to 55 and 59 virulence genes respectively. Different resistance mechanisms were identified: antibiotic inactivation, antibiotic efflux, antibiotic target replacement, and antibiotic target change. We identified several genes associated with aminoglycoside resistance, sulfonamide resistance. trimethoprim resistance tetracycline resistance proteins. Also, those responsible for chloramphenicol resistance. For beta-lactam resistance, only blaVEB and blaCMY-2 genes were detected. Genome analysis revealed several virulence factors contribution in isolates pathogenicity and bacterial adaptation. As well as numerous typical secretion systems (TSSs) were present in the two isolates, including T6SS and T3SS. Whole genome sequencing of both isolates identify their genetic context of antimicrobial resistant genes and virulence determinants. This genomic analysis offers detailed representation of resistant mechanisms. Also, it clarifies P. mirabilis ability to acquire resistance and highlights the emergence of extensive drug resistant (XDR) and pan-drug resistant (PDR) strains. This may help in choosing the most appropriate antibiotic treatment and limiting broad spectrum antibiotic use.
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Affiliation(s)
- Sarah Soliman
- Trauma Intensive Care Unit, Zagazig University Hospitals, Zagazig, Egypt
| | - Salah Abdalla
- Department of Microbiology and Immunology, Faculty of Pharmacy, Suez Canal University, Ismailia, Egypt
- Department of Microbiology and Immunology, Faculty of Pharmacy, El Saleheya El Gadida University, El Saleheya, Egypt
| | - Amal Zedan
- Department of Clinical Pathology, Faculty of Medicine, Zagazig University, Zagazig, Egypt
| | - Shymaa Enany
- Department of Microbiology and Immunology, Faculty of Pharmacy, Suez Canal University, Ismailia, Egypt.
- Biomedical Research Department, Armed Force College of Medicine, Cairo, Egypt.
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Kern WV, Steib-Bauert M, Baumann J, Kramme E, Först G, de With K. Impact of the COVID-19 Pandemic on Inpatient Antibiotic and Antifungal Drug Prescribing Volumes in Germany. Antibiotics (Basel) 2024; 13:837. [PMID: 39335010 PMCID: PMC11429143 DOI: 10.3390/antibiotics13090837] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2024] [Revised: 08/27/2024] [Accepted: 08/30/2024] [Indexed: 09/30/2024] Open
Abstract
BACKGROUND Previous studies found that the coronavirus disease 2019 (COVID-19) pandemic had a variable impact on the consumption of antimicrobial drugs in human medicine, with trends in several European countries differing between community and inpatient prescribing. AIM This study analysed changes in the volumes and use density of antibacterial and antifungal drugs dispensed in acute care hospitals in Germany between 2019 and 2022. METHODS Surveillance data for the four years available from 279 hospitals were expressed as the total volumes of daily doses or as use density (daily doses per 100 patient/occupied bed days) per year and analysed descriptively, using recommended hospital-adapted daily dose definitions (RDDs) and (as sensitivity analysis) WHO/ATC-defined daily dose definitions (DDD). Hospitals were stratified according to size (number of beds), university affiliation, and location (East, West, South). RESULTS There were significant decreases in both the total number of patient days and antibacterial drug volumes in 2020 through 2022 compared with 2019. The relative changes between 2019 and 2020, 2021, and 2022 were -12.8%, -13.5%, and -13.3% for patient days, and -9.7%, -11.0%, and -10.1% for antibacterial RDDs, respectively. Broad-spectrum betalactams, notably piperacillin-tazobactam and carbapenems, increased in volume, unlike most other drug classes. The resulting antibacterial drug use density was slightly but significantly increased, with pooled means (and medians) of 43.3 (40.0) RDD/100 in 2019 compared to 44.8 (41.7), 44.5 (40.80), and 44.9 (41.7) RDD/100 in the years 2020 through 2022, respectively. Antifungal drug volumes and use density increased after 2019 and peaked in 2021 (the difference between 2019 and 2021 for total volumes was +6.4%, and that for pooled mean use density values was +22.9%, respectively). These trends were similar in the different hospital strata and comparable when DDDs instead of RDDs were used. CONCLUSIONS Similar to what has been observed in a majority of European countries, the total volume of antibacterial drug use in German acute care hospitals decreased with the pandemic, without a rebound phenomenon in 2022. In association with restricted hospital capacities and presumably more immunocompromised general medicine patients, however, inpatient prescribing of (primarily broad-spectrum) antibacterials and of antifungal drugs increased.
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Affiliation(s)
- Winfried V Kern
- Division of Infectious Diseases, Department of Medicine II, University Hospital and Medical Centre, and Faculty of Medicine, Albert-Ludwigs-University, 79106 Freiburg, Germany
- Akademie für Infektionsmedizin, 10789 Berlin, Germany
| | - Michaela Steib-Bauert
- Division of Infectious Diseases, Department of Medicine II, University Hospital and Medical Centre, and Faculty of Medicine, Albert-Ludwigs-University, 79106 Freiburg, Germany
| | - Jürgen Baumann
- Central Pharmacy, Medius-Kliniken, 73760 Ostfildern-Ruit, Germany
- ADKA-Bundesverband Deutscher Krankenhausapotheker, 10559 Berlin, Germany
| | - Evelyn Kramme
- Department of Infectious Diseases and Microbiology, University Hospital Schleswig-Holstein Campus Lübeck, University of Lübeck, 23562 Lübeck, Germany
- DGI-Deutsche Gesellschaft für Infektiologie, 10789 Berlin, Germany
| | - Gesche Först
- Division of Infectious Diseases, Department of Medicine II, University Hospital and Medical Centre, and Faculty of Medicine, Albert-Ludwigs-University, 79106 Freiburg, Germany
- ADKA-Bundesverband Deutscher Krankenhausapotheker, 10559 Berlin, Germany
- Institute of Pharmaceutical Sciences, Faculty of Chemistry and Pharmacy, Albert-Ludwigs-University, 79085 Freiburg, Germany
| | - Katja de With
- DGI-Deutsche Gesellschaft für Infektiologie, 10789 Berlin, Germany
- Institute of Infectious Diseases, University Hospital Carl Gustav Carus, Technical University, 01307 Dresden, Germany
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Reffat N, Schwei RJ, Griffin M, Pop-Vicas A, Schulz LT, Pulia MS. A scoping review of bacterial resistance among inpatients amidst the COVID-19 pandemic. J Glob Antimicrob Resist 2024; 38:49-65. [PMID: 38789083 PMCID: PMC11392638 DOI: 10.1016/j.jgar.2024.05.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Revised: 05/07/2024] [Accepted: 05/10/2024] [Indexed: 05/26/2024] Open
Abstract
OBJECTIVES The COVID-19 pandemic disrupted antimicrobial stewardship and infection prevention operations worldwide, raising concerns for an acceleration of antimicrobial resistance (AMR). Therefore, we aimed to define the scope of peer reviewed research comparing AMR in inpatient bacterial clinical cultures before and after the start of the COVID-19 pandemic. METHODS We conducted a scoping review and searched PubMed, Scopus, and Web of Science through 15 June 2023. Our inclusion criteria were: (1) English language, (2) primary evidence, (3) peer-reviewed, (4) clinical culture data from humans, (5) AMR data for at least one bacterial order/species, (6) inpatient setting, (7) use of statistical testing to evaluate AMR data before and during the COVID-19 pandemic. Reviewers extracted country, study design, type of analysis, study period, setting and population, number of positive cultures or isolates, culture type(s), method of AMR analysis, organisms, and AMR results. Study results were organised by organism and antibiotic class or resistance mechanism. AMR results are also summarised by individual study and across all studies. RESULTS In total, 4805 articles were identified with 55 papers meeting inclusion criteria. Acinetobacter baumannii, Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Staphylococcus aureus were the most commonly studied organisms. There were 464 bacterial AMR results across all studies with 82 (18%) increase, 71 (15%) decrease, and 311 (67%) no change results. CONCLUSIONS The literature examining the impact of COVID-19 on AMR among inpatients is diverse with most results reflecting no change pre/post pandemic. Ongoing inquiry is needed into evolving patterns in AMR post COVID-19.
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Affiliation(s)
- Noora Reffat
- School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA
| | - Rebecca J Schwei
- BerbeeWalsh Department of Emergency Medicine, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA
| | - Meggie Griffin
- BerbeeWalsh Department of Emergency Medicine, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA
| | - Aurora Pop-Vicas
- Department of Medicine-Division of Infectious Disease, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA
| | - Lucas T Schulz
- School of Pharmacy, University of Wisconsin-Madison, Madison, WI, USA
| | - Michael S Pulia
- BerbeeWalsh Department of Emergency Medicine, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA; Department of Industrial and Systems Engineering, College of Engineering, University of Wisconsin-Madison, Madison, WI, USA.
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Anand A, Verma A, Kaur S, Kathayat P, Manoj RM, Aakanksha A, Turzin JK, Satapathy P, Khatib MN, Gaidhane S, Zahiruddin QS, Kukreti N, Rustagi S, Surana A. An overview of sulbactam-durlobactam approval and implications in advancing therapeutics for hospital-acquired and ventilator-associated pneumonia by acinetobacter baumannii-calcoaceticus complex: A narrative review. Health Sci Rep 2024; 7:e70066. [PMID: 39257909 PMCID: PMC11386240 DOI: 10.1002/hsr2.70066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Revised: 08/26/2024] [Accepted: 08/29/2024] [Indexed: 09/12/2024] Open
Abstract
Purpose Infections caused by Acinetobacter baumannii, particularly those resistant to antibiotics such as carbapenem, have become a global health crisis with a significant mortality rate. Hospital-acquired pneumonia (HAP) and ventilator-associated pneumonia (VAP) resulting from the A. baumannii-calcoaceticus (ABC) complex represent a major clinical challenge. This review aimed to understand the approval process, mechanism of action, therapeutic potential, and future implications of sulbactam-durlobactam therapy (SUL-DUR). Methods PubMed, Web of Science, EMBASE, Clinical trials. gov, ICTRP, and CENTRAL were searched for studies on SUL-DUR for the treatment of hospital-acquired pneumonia and ventilator-associated pneumonia. Also, World Health Organization, U.S. Food and Drug Administration, and Centers for Disease Control and Prevention websites were searched for relevant information. Results SUL-DUR, marketed as Xacduro, is a novel pharmaceutical combination that functions as a narrow-spectrum parenterally administered antibiotic. Sulbactam acts as a β-lactamase inhibitor, whereas durlobactam protects against degradation by A. baumannii enzymes. A phase 1 trial successfully established the safety and tolerability of SUL-DUR in patients with normal and mild renal impairment. A phase 2 trial demonstrated the safety and tolerability of SUL-DUR in a larger population with urinary tract infections. A phase 3 trial showed that SUL-DUR was non-inferior to colistin in terms of mortality in A. baumannii-related VAP, HAP, and bacteremia. Conclusion The combination of sulbactam and durlobactam is a promising treatment option for HAP and VAP caused by ABC complex.
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Affiliation(s)
- Ayush Anand
- B. P. Koirala Institute of Health Sciences Dharan Nepal
- MediSurg Research Darbhanga India
- Global Consortium of Medical Education and Research Pune India
| | - Amogh Verma
- Rama Medical College Hospital and Research Centre Hapur India
| | - Sarabjeet Kaur
- Global Consortium of Medical Education and Research Pune India
- Government Medical College Patiala India
| | - Priyangi Kathayat
- Global Consortium of Medical Education and Research Pune India
- Smt. NHL Municipal Medical College Ahmedabad India
| | - Rachel M Manoj
- Global Consortium of Medical Education and Research Pune India
- Nicolae Testemițanu State University of Medicine and Pharmacy Chisinau Moldova
| | - Aakanksha Aakanksha
- Global Consortium of Medical Education and Research Pune India
- Tbilisi State Medical University Tbilisi Georgia
| | - Justice K Turzin
- Global Consortium of Medical Education and Research Pune India
- Department of Biomedical Science, College of Health and Allied Sciences University of Cape Coast Cape Coast Ghana
| | - Prakasini Satapathy
- Center for Global Health Research, Saveetha Institute of Medical and Technical Sciences, Saveetha Medical College and Hospital Saveetha University Chennai India
- Medical Laboratories Techniques Department AL-Mustaqbal University Hillah Iraq
| | - Mahalaqua N Khatib
- Division of Evidence Synthesis, Datta Meghe Institute of Higher Education Global Consortium of Public Health and Research Wardha India
| | - Shilpa Gaidhane
- Datta Meghe Institute of Higher Education and Research Jawaharlal Nehru Medical College Wardha India
| | - Quazi S Zahiruddin
- Division of Evidence Synthesis, Datta Meghe Institute of Higher Education South Asia Infant Feeding Research Network (SAIFRN), Global Consortium of Public Health and Research Wardha India
| | - Neelima Kukreti
- School of Pharmacy Graphic Era Hill University Dehradun India
| | - Sarvesh Rustagi
- School of Applied and Life Sciences Uttaranchal University Dehradun India
| | - Arihant Surana
- Department of Internal Medicine St. Vincent Hospital Worcester Massachusetts USA
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Chukwudile B, Pan D, Silva L, Gogoi M, Al-Oraibi A, Bird P, George N, Thompson HA, Baggaley RF, Hargreaves S, Pareek M, Nellums LB. Antimicrobial resistance among migrants in Europe: a systematic review and meta-analysis - update from 2017 to 2023. EClinicalMedicine 2024; 75:102801. [PMID: 39296945 PMCID: PMC11408055 DOI: 10.1016/j.eclinm.2024.102801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 07/17/2024] [Accepted: 08/12/2024] [Indexed: 09/21/2024] Open
Abstract
Background Antimicrobial resistance (AMR) is a critical global health concern. A previous systematic review showed that migrants in Europe are at increased risk of AMR. Since the COVID-19 pandemic there have been rapid changes in patterns of antibiotic use, AMR, and migration. We aimed to present an updated evidence synthesis on the current distribution of AMR among migrants in Europe. Methods We carried out a systematic review and meta-analysis in accordance with PRISMA guidelines (PROSPERO ID: CRD42022343263). We searched databases (MEDLINE, Embase, PubMed and Scopus) from 18 January 2017 until 18 January 2023 to identify primary data from observational studies reporting any laboratory-confirmed AMR among migrants in the European Economic Area (EEA) and European Union-15 (EU-15) countries using over 7 key search terms for migrants and over 70 terms for AMR and countries in Europe. Outcomes were infection with, or colonisation of AMR bacteria. Methodological quality was assessed using Joanna Briggs Institute Critical Appraisal Checklist for Observational Studies. We meta-analysed the pooled-prevalence of infection and/or colonisation of AMR organisms. Findings Among 630 articles, 21 observational studies met the inclusion criteria and were included in this review. The pooled prevalence for any detected AMR was 28.0% (95% CI 18.0%-41.0%, I 2 = 100%) compared to a 25.4% seen in the previous review; gram-negative bacteria 31.0% (95% CI 20.0%-44.0%, I 2 = 100%), and methicillin-resistant staphylococcus aureus 10.0% (95% CI 5.0%-16.0%, I 2 = 99%). Drug-resistant bacteria were more prevalent in community settings in large migrant populations (pooled prevalence: 41.0%, 95% CI 24.0%-60.0%, I 2 = 99%) than in hospitals (21.0%, 95% CI 12.0%-32.0%, I 2 = 99%). AMR estimates in 'other' migrants were 32.0%, (95% CI 12.0%-57.0%, I 2 = 100%) and 28.0% (95% CI 18.0%-38.0%, I 2 = 100%) in forced migrants. No firm evidence of AMR acquisition with arrival time or length of stay in the host country was found. Interpretation Studies investigating AMR in migrants are highly heterogenous. However, since the COVID-19 pandemic, migrants may be at higher risk of acquiring resistant bacteria, particularly gram-negative bacteria, within community settings such as refugee camps and detention centres in Europe. Our study highlights the importance of infrastructure and hygiene measures within these settings, to mitigate transmission of resistant pathogens. Policy-makers should screen for AMR in migrants prior to departure from countries of origin, where feasible, and upon arrival to a new country to ensure optimal health screening, infection control and effective treatment. Funding There was no funding source for this study.
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Affiliation(s)
- Bridget Chukwudile
- Nottingham Centre for Public Health and Epidemiology, Lifespan and Population Health, School of Medicine, University of Nottingham, Nottingham, United Kingdom
| | - Daniel Pan
- Development Centre for Population Health, University of Leicester, Leicester, United Kingdom
- Department of Respiratory Sciences, University of Leicester, Leicester, United Kingdom
- Leicester NIHR Biomedical Research Centre, Leicester, United Kingdom
- Department of Infectious Diseases and HIV Medicine, University Hospitals of Leicester, Leicester, NHS Trust, United Kingdom
- Li Ka Shing Centre for Health Information and Discovery, Oxford Big Data Institute, Oxford, University of Oxford, United Kingdom
- WHO Collaborating Centre for Infectious Disease Epidemiology and Control, School of Public Health, Li Ka Sing Faculty of Medicine, University of Hong Kong, Hong Kong, China
| | - Luisa Silva
- Nottingham Centre for Public Health and Epidemiology, Lifespan and Population Health, School of Medicine, University of Nottingham, Nottingham, United Kingdom
- Department of Respiratory Sciences, University of Leicester, Leicester, United Kingdom
- Leicester NIHR Biomedical Research Centre, Leicester, United Kingdom
| | - Mayuri Gogoi
- Development Centre for Population Health, University of Leicester, Leicester, United Kingdom
- Department of Respiratory Sciences, University of Leicester, Leicester, United Kingdom
- Leicester NIHR Biomedical Research Centre, Leicester, United Kingdom
| | - Amani Al-Oraibi
- Nottingham Centre for Public Health and Epidemiology, Lifespan and Population Health, School of Medicine, University of Nottingham, Nottingham, United Kingdom
- Development Centre for Population Health, University of Leicester, Leicester, United Kingdom
- Department of Respiratory Sciences, University of Leicester, Leicester, United Kingdom
| | - Paul Bird
- Department of Respiratory Sciences, University of Leicester, Leicester, United Kingdom
- Department of Microbiology, University Hospitals of Leicester NHS Trust, Leicester, United Kingdom
| | - Nisha George
- Development Centre for Population Health, University of Leicester, Leicester, United Kingdom
- Leicester NIHR Biomedical Research Centre, Leicester, United Kingdom
| | - Hayley A Thompson
- Department of Medicine, Imperial College London, London, United Kingdom
- Global Health Programs Division, PATH, Seattle, WA, USA
| | - Rebecca F Baggaley
- Development Centre for Population Health, University of Leicester, Leicester, United Kingdom
- Leicester NIHR Biomedical Research Centre, Leicester, United Kingdom
- Department of Population Health Sciences, University of Leicester, Leicester, United Kingdom
| | - Sally Hargreaves
- Migrant Health Research Group, Institute for Infection and Immunity, St George's, University of London, London, United Kingdom
| | - Manish Pareek
- Development Centre for Population Health, University of Leicester, Leicester, United Kingdom
- Department of Respiratory Sciences, University of Leicester, Leicester, United Kingdom
- Leicester NIHR Biomedical Research Centre, Leicester, United Kingdom
- Department of Infectious Diseases and HIV Medicine, University Hospitals of Leicester, Leicester, NHS Trust, United Kingdom
- NIHR Applied Research Collaboration East Midlands, Leicester, United Kingdom
| | - Laura B Nellums
- Nottingham Centre for Public Health and Epidemiology, Lifespan and Population Health, School of Medicine, University of Nottingham, Nottingham, United Kingdom
- College of Population Health, University of New Mexico, Albuquerque, NM, United States
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48
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Guan L, Beig M, Wang L, Navidifar T, Moradi S, Motallebi Tabaei F, Teymouri Z, Abedi Moghadam M, Sedighi M. Global status of antimicrobial resistance in clinical Enterococcus faecalis isolates: systematic review and meta-analysis. Ann Clin Microbiol Antimicrob 2024; 23:80. [PMID: 39182092 PMCID: PMC11344933 DOI: 10.1186/s12941-024-00728-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 07/29/2024] [Indexed: 08/27/2024] Open
Abstract
BACKGROUND Due to the increasing emergence of antibiotic resistance in Enterococcus faecalis (E. faecalis), it indicated as potentially opportunistic pathogen causing various healthcare-associated and life-threatening diseases around the world. OBJECTIVE The aim of this meta-analysis was to evaluate the weighted pooled resistance rates in clinical E. faecalis isolates based on over time, areas, antimicrobial susceptibility testing (AST), and infection source. METHODS We searched the studies in PubMed, Scopus, and Web of Science (November 30, 2022). All statistical analyses were carried out using the statistical package R. RESULTS The analysis encompassed a total of 74 studies conducted in 28 countries. According to the meta-regression, the chloramphenicol, fosfomycin, imipenem, linezolid, minocycline, norfloxacin, quinupristin-dalfopristin, and tetracycline resistance rate increased over time. Analysis revealed statistically significant differences in antibiotic resistance rates for ampicillin, chloramphenicol, erythromycin, gentamicin, penicillin, rifampicin, teicoplanin, tetracycline, and vancomycin across various countries. CONCLUSIONS Globally, the prevalence of drug resistant E. faecalis strains are on the increase over time. Daptomycin and tigecycline can be an effective agent for the treatment of clinical E. faecalis infections. Considering the low prevalence of antibiotic resistance in continents of Europe and Australia, it is suggested to take advantage of their preventive strategies in order to obtain efficient results in other places with high prevalence of resistance.
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Affiliation(s)
- Lingbo Guan
- Department of Intensive Care Unit, Linping Campus, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, 311100, Zhejiang, China
| | - Masoumeh Beig
- Department of Bacteriology, Pasteur Institute of Iran, Tehran, Iran
| | - Lina Wang
- Department of Intensive Care Unit, Linping Campus, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, 311100, Zhejiang, China
| | - Tahereh Navidifar
- Department of Basic Sciences, Shoushtar Faculty of Medical Sciences, Shoushtar, Iran
| | - Samaneh Moradi
- Department of Microbiology, Faculty of Medicine, Golestan University of Medical Sciences, Gorgan, Iran
| | - Faezeh Motallebi Tabaei
- Department of Microbiology, Faculty of Medicine, Golestan University of Medical Sciences, Gorgan, Iran.
| | - Zahra Teymouri
- Laboratory Sciences Research Center, Golestan University of Medical Sciences, Gorgan, Iran
| | - Mahya Abedi Moghadam
- Laboratory Sciences Research Center, Golestan University of Medical Sciences, Gorgan, Iran
| | - Mansour Sedighi
- Cellular and Molecular Research Center, Research Institute for Health Development, Kurdistan University of Medical Sciences, Sanandaj, Iran.
- Department of Microbiology, Faculty of Medicine, Kurdistan University of Medical Sciences, Sanandaj, Iran.
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49
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Damonti L, Gasser M, Kronenberg A, Buetti N. Epidemiology of bloodstream infections caused by extended-spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae in Switzerland, 2015-2022: secular trends and association with the COVID-19 pandemic. J Hosp Infect 2024; 150:145-152. [PMID: 38838742 DOI: 10.1016/j.jhin.2024.05.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2024] [Revised: 05/23/2024] [Accepted: 05/25/2024] [Indexed: 06/07/2024]
Abstract
BACKGROUND The association between the COVID-19 pandemic and the incidence of invasive infections caused by multidrug-resistant organisms remains a topic of debate. AIM To analyse the national incidence rates of bloodstream infections (BSI) caused by Escherichia coli (EC) and Klebsiella pneumoniae (KP) with extended-spectrum cephalosporin resistance (ESCR) in two distinct regions in Switzerland, each exhibiting varying antimicrobial resistance patterns and that were impacted differently by the pandemic. METHODS Data was analysed from positive blood cultures prospectively collected by the nationwide surveillance system (ANRESIS) from January 1st, 2015, to August 31st, 2022. To explore the potential relationship between COVID-19 patient occupancy and ESCR incidence rates, an in-depth analysis was conducted over the two-year pandemic period from April 1st, 2020, to March 30th, 2022, using Quasi-Poisson and logistic regression analyses. FINDINGS During the study period, 40,997 EC-BSI and 8537 KP-BSI episodes were collected and reported to ANRESIS by the participating hospitals. ESCR was observed in 11% (N = 4313) of E. coli and 8% (N = 664) of K. pneumoniae, respectively. A significant reduction in ESCR-EC BSI incidence occurred during the pandemic in the region with the highest COVID-19 incidence. Conversely, ESCR-KP BSI incidence initially fell considerably and then increased during the pandemic in both regions, though this effect was not statistically significant. No association between hospital occupancy from COVID-19 patients and these trends was observed. CONCLUSION In the early phase of the COVID-19 pandemic, a decrease in ESCR rates was observed, particularly in ESCR-EC BSI within the most heavily impacted region.
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Affiliation(s)
- L Damonti
- Department of Infectious Diseases, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland.
| | - M Gasser
- Swiss Centre for Antibiotic Resistance, Institute for Infectious Diseases, University Bern, Bern, Switzerland
| | - A Kronenberg
- Swiss Centre for Antibiotic Resistance, Institute for Infectious Diseases, University Bern, Bern, Switzerland
| | - N Buetti
- Infection Control Programme, University of Geneva Hospitals and Faculty of Medicine, WHO Collaborating Center, Geneva, Switzerland; Université Paris - Cité, INSERM, IAME UMR 1137, Paris, France
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50
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Li W, Yang X, Liu C, Liu X, Shi L, Zeng Y, Xia H, Li J, Zhao M, Yang S, Li X, Hu B, Yang L. Multiple impacts of the COVID-19 pandemic and antimicrobial stewardship on antimicrobial resistance in nosocomial infections: an interrupted time series analysis. Front Public Health 2024; 12:1419344. [PMID: 39086796 PMCID: PMC11288819 DOI: 10.3389/fpubh.2024.1419344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Accepted: 07/02/2024] [Indexed: 08/02/2024] Open
Abstract
Objectives The emergency response to the COVID-19 pandemic may disrupt hospital management activities of antimicrobial resistance (AMR). This study aimed to determine the changing AMR trend over the period in China when stringent COVID-19 response measures were implemented. Methods This retrospective study was conducted in a designated hospital for COVID-19 patients in Guangzhou, China from April 2018 to September 2021. The prevalence of 13 antimicrobial-resistant bacteria was compared before and after the COVID-19 responses through Chi-square tests. Interrupted time series (ITS) models on the weekly prevalence of AMR were established to determine the changing trend. Controlled ITS models were performed to compare the differences between subgroups. Results A total of 10,134 isolates over 1,265 days were collected. And antimicrobial-resistant strains presented in 38.6% of the testing isolates. The weekly AMR prevalence decreased by 0.29 percentage point (95% CI [0.05-0.80]) after antimicrobial stewardship (AMS) policy, despite an increase in the prevalence of penicillin-resistant Streptococcus pneumoniae (from 0/43 to 15/43, p < 0.001), carbapenem-resistant Escherichia coli (from 20/1254 to 41/1184, p = 0.005), and carbapenem-resistant Klebsiella pneumoniae (from 93/889 to 114/828, p = 0.042). And the changing trend did not vary by gender (male vs. female), age (<65 vs. ≥65 years), service setting (outpatient vs. inpatient), care unit (ICU vs. non-ICU), the primary site of infection (Lung vs. others), and Gram type of bacteria (positive vs. negative). Conclusion The response to COVID-19 did not lead to an increase in overall AMR; however, it appears that management strategy on the prudent use of antimicrobials likely contributed to a sizable long-term drop. The frequency of several multidrug-resistant bacteria continues to increase after the COVID-19 epidemic. It is crucial to continue to monitor AMR when COVID-19 cases have surged in China after the relaxation of restriction measures.
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Affiliation(s)
- Weibin Li
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Xinyi Yang
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Chaojie Liu
- School of Psychology and Public Health, La Trobe University, Melbourne, VIC, Australia
| | - Xu Liu
- Department of Infectious Disease, The Fifth Affiliated Hospital, Sun Yat-sen University, Zhuhai, China
| | - Lin Shi
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Yingchao Zeng
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Haohai Xia
- School of Public Health, Sun Yat-sen University, Guangzhou, China
| | - Jia Li
- Department of Pharmacy, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
| | - Manzhi Zhao
- Department of Pulmonary and Critical Care Medicine, Guangdong Provincial People's Hospital, Guangdong Academy of Medical Sciences, Southern Medical University, Guangzhou, China
| | - Shifang Yang
- Department of Pulmonary and Critical Care Medicine, Guangdong Provincial People's Hospital, Guangdong Academy of Medical Sciences, Southern Medical University, Guangzhou, China
| | - Xiaojie Li
- Department of Laboratory Medicine, The Third Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
| | - Bo Hu
- Department of Laboratory Medicine, The Third Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
| | - Lianping Yang
- School of Public Health, Sun Yat-sen University, Guangzhou, China
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