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For: Val ME, Bouvier M, Campos J, Sherratt D, Cornet F, Mazel D, Barre FX. The single-stranded genome of phage CTX is the form used for integration into the genome of Vibrio cholerae. Mol Cell. 2005;19:559-566. [PMID: 16109379 DOI: 10.1016/j.molcel.2005.07.002] [Cited by in Crossref: 124] [Cited by in F6Publishing: 101] [Article Influence: 7.3] [Reference Citation Analysis]
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7 Brigulla M, Wackernagel W. Molecular aspects of gene transfer and foreign DNA acquisition in prokaryotes with regard to safety issues. Appl Microbiol Biotechnol 2010;86:1027-41. [DOI: 10.1007/s00253-010-2489-3] [Cited by in Crossref: 49] [Cited by in F6Publishing: 41] [Article Influence: 4.1] [Reference Citation Analysis]
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13 Chandler M. Singled out for integration. Nature 2006;440:1121-2. [DOI: 10.1038/4401121a] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.1] [Reference Citation Analysis]
14 Merino M, Acosta J, Poza M, Sanz F, Beceiro A, Chaves F, Bou G. OXA-24 carbapenemase gene flanked by XerC/XerD-like recombination sites in different plasmids from different Acinetobacter species isolated during a nosocomial outbreak. Antimicrob Agents Chemother 2010;54:2724-7. [PMID: 20385865 DOI: 10.1128/AAC.01674-09] [Cited by in Crossref: 77] [Cited by in F6Publishing: 53] [Article Influence: 6.4] [Reference Citation Analysis]
15 Escudero JA, Loot C, Parissi V, Nivina A, Bouchier C, Mazel D. Unmasking the ancestral activity of integron integrases reveals a smooth evolutionary transition during functional innovation. Nat Commun 2016;7:10937. [PMID: 26961432 DOI: 10.1038/ncomms10937] [Cited by in Crossref: 11] [Cited by in F6Publishing: 9] [Article Influence: 1.8] [Reference Citation Analysis]
16 Bischerour J, Spangenberg C, Barre FX. Holliday junction affinity of the base excision repair factor Endo III contributes to cholera toxin phage integration. EMBO J 2012;31:3757-67. [PMID: 22863778 DOI: 10.1038/emboj.2012.219] [Cited by in Crossref: 14] [Cited by in F6Publishing: 12] [Article Influence: 1.4] [Reference Citation Analysis]
17 Kersulyte D, Lee W, Subramaniam D, Anant S, Herrera P, Cabrera L, Balqui J, Barabas O, Kalia A, Gilman RH, Berg DE. Helicobacter Pylori's plasticity zones are novel transposable elements. PLoS One. 2009;4:e6859. [PMID: 19727398 DOI: 10.1371/journal.pone.0006859] [Cited by in Crossref: 71] [Cited by in F6Publishing: 73] [Article Influence: 5.5] [Reference Citation Analysis]
18 MacDonald D, Demarre G, Bouvier M, Mazel D, Gopaul DN. Structural basis for broad DNA-specificity in integron recombination. Nature 2006;440:1157-62. [PMID: 16641988 DOI: 10.1038/nature04643] [Cited by in Crossref: 109] [Cited by in F6Publishing: 100] [Article Influence: 6.8] [Reference Citation Analysis]
19 Rajeev L, Malanowska K, Gardner JF. Challenging a paradigm: the role of DNA homology in tyrosine recombinase reactions. Microbiol Mol Biol Rev 2009;73:300-9. [PMID: 19487729 DOI: 10.1128/MMBR.00038-08] [Cited by in Crossref: 69] [Cited by in F6Publishing: 31] [Article Influence: 5.3] [Reference Citation Analysis]
20 Krupovic M, Forterre P. Microviridae goes temperate: microvirus-related proviruses reside in the genomes of Bacteroidetes. PLoS One 2011;6:e19893. [PMID: 21572966 DOI: 10.1371/journal.pone.0019893] [Cited by in Crossref: 71] [Cited by in F6Publishing: 68] [Article Influence: 6.5] [Reference Citation Analysis]
21 Das B, Bischerour J, Val ME, Barre FX. Molecular keys of the tropism of integration of the cholera toxin phage. Proc Natl Acad Sci USA. 2010;107:4377-4382. [PMID: 20133778 DOI: 10.1073/pnas.0910212107] [Cited by in Crossref: 51] [Cited by in F6Publishing: 44] [Article Influence: 4.3] [Reference Citation Analysis]
22 Ahmad AA, Askora A, Kawasaki T, Fujie M, Yamada T. The filamentous phage XacF1 causes loss of virulence in Xanthomonas axonopodis pv. citri, the causative agent of citrus canker disease. Front Microbiol 2014;5:321. [PMID: 25071734 DOI: 10.3389/fmicb.2014.00321] [Cited by in Crossref: 27] [Cited by in F6Publishing: 22] [Article Influence: 3.4] [Reference Citation Analysis]
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24 Falero A, Caballero A, Ferrán B, Izquierdo Y, Fando R, Campos J. DNA binding proteins of the filamentous phages CTXphi and VGJphi of Vibrio cholerae. J Bacteriol. 2009;191:5873-5876. [PMID: 19617366 DOI: 10.1128/jb.01206-08] [Cited by in Crossref: 12] [Cited by in F6Publishing: 4] [Article Influence: 0.9] [Reference Citation Analysis]
25 Yeh TY. Complete nucleotide sequence of a new filamentous phage, Xf109, which integrates its genome into the chromosomal DNA of Xanthomonas oryzae. Arch Virol 2017;162:567-72. [PMID: 27743252 DOI: 10.1007/s00705-016-3105-3] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.5] [Reference Citation Analysis]
26 Loot C, Parissi V, Escudero JA, Amarir-Bouhram J, Bikard D, Mazel D. The integron integrase efficiently prevents the melting effect of Escherichia coli single-stranded DNA-binding protein on folded attC sites. J Bacteriol 2014;196:762-71. [PMID: 24296671 DOI: 10.1128/JB.01109-13] [Cited by in Crossref: 12] [Cited by in F6Publishing: 8] [Article Influence: 1.3] [Reference Citation Analysis]
27 Martínez E, Paly E, Barre FX. CTXφ Replication Depends on the Histone-Like HU Protein and the UvrD Helicase. PLoS Genet 2015;11:e1005256. [PMID: 25992634 DOI: 10.1371/journal.pgen.1005256] [Cited by in Crossref: 9] [Cited by in F6Publishing: 8] [Article Influence: 1.3] [Reference Citation Analysis]
28 Johnson CM, Grossman AD. Integrative and Conjugative Elements (ICEs): What They Do and How They Work. Annu Rev Genet 2015;49:577-601. [PMID: 26473380 DOI: 10.1146/annurev-genet-112414-055018] [Cited by in Crossref: 237] [Cited by in F6Publishing: 194] [Article Influence: 33.9] [Reference Citation Analysis]
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30 Hellard E, Fouchet D, Vavre F, Pontier D. Parasite-Parasite Interactions in the Wild: How To Detect Them? Trends Parasitol 2015;31:640-52. [PMID: 26440785 DOI: 10.1016/j.pt.2015.07.005] [Cited by in Crossref: 41] [Cited by in F6Publishing: 30] [Article Influence: 5.9] [Reference Citation Analysis]
31 Nivina A, Escudero JA, Vit C, Mazel D, Loot C. Efficiency of integron cassette insertion in correct orientation is ensured by the interplay of the three unpaired features of attC recombination sites. Nucleic Acids Res 2016;44:7792-803. [PMID: 27496283 DOI: 10.1093/nar/gkw646] [Cited by in Crossref: 18] [Cited by in F6Publishing: 13] [Article Influence: 3.0] [Reference Citation Analysis]
32 Wright LD, Johnson CM, Grossman AD. Identification of a Single Strand Origin of Replication in the Integrative and Conjugative Element ICEBs1 of Bacillus subtilis. PLoS Genet 2015;11:e1005556. [PMID: 26440206 DOI: 10.1371/journal.pgen.1005556] [Cited by in Crossref: 16] [Cited by in F6Publishing: 14] [Article Influence: 2.3] [Reference Citation Analysis]
33 Antonio Escudero J, Loot C, Nivina A, Mazel D. The Integron: Adaptation On Demand. In: Craig NL, Chandler M, Gellert M, Lambowitz AM, Rice PA, Sandmeyer SB, editors. Mobile DNA III. Washington: ASM Press; 2015. pp. 139-61. [DOI: 10.1128/9781555819217.ch6] [Cited by in Crossref: 5] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
34 Midonet C, Miele S, Paly E, Guerois R, Barre FX. The TLCΦ satellite phage harbors a Xer recombination activation factor. Proc Natl Acad Sci U S A 2019;116:18391-6. [PMID: 31420511 DOI: 10.1073/pnas.1902905116] [Cited by in Crossref: 8] [Cited by in F6Publishing: 6] [Article Influence: 2.7] [Reference Citation Analysis]
35 Midonet C, Barre FX. Xer Site-Specific Recombination: Promoting Vertical and Horizontal Transmission of Genetic Information. Microbiol Spectr 2014;2. [PMID: 26104463 DOI: 10.1128/microbiolspec.MDNA3-0056-2014] [Cited by in Crossref: 24] [Cited by in F6Publishing: 28] [Article Influence: 4.0] [Reference Citation Analysis]
36 Boyd EF. Bacteriophage-Encoded Bacterial Virulence Factors and Phage–Pathogenicity Island Interactions. Bacteriophages, Part A. Elsevier; 2012. pp. 91-118. [DOI: 10.1016/b978-0-12-394621-8.00014-5] [Cited by in Crossref: 79] [Cited by in F6Publishing: 52] [Article Influence: 7.9] [Reference Citation Analysis]
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38 Pant A, Das B, Bhadra RK. CTX phage of Vibrio cholerae: Genomics and applications. Vaccine 2020;38 Suppl 1:A7-A12. [PMID: 31272871 DOI: 10.1016/j.vaccine.2019.06.034] [Cited by in Crossref: 6] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
39 Carnoy C, Roten CA. The dif/Xer recombination systems in proteobacteria. PLoS One. 2009;4:e6531. [PMID: 19727445 DOI: 10.1371/journal.pone.0006531] [Cited by in Crossref: 80] [Cited by in F6Publishing: 74] [Article Influence: 6.2] [Reference Citation Analysis]
40 Chouikha I, Charrier L, Filali S, Derbise A, Carniel E. Insights into the infective properties of YpfΦ, the Yersinia pestis filamentous phage. Virology 2010;407:43-52. [PMID: 20728914 DOI: 10.1016/j.virol.2010.07.048] [Cited by in Crossref: 19] [Cited by in F6Publishing: 16] [Article Influence: 1.6] [Reference Citation Analysis]
41 Halder K, Das B, Nair GB, Bhadra RK. Molecular evidence favouring step-wise evolution of Mozambique Vibrio cholerae O1 El Tor hybrid strain. Microbiology 2010;156:99-107. [DOI: 10.1099/mic.0.032458-0] [Cited by in Crossref: 20] [Cited by in F6Publishing: 10] [Article Influence: 1.7] [Reference Citation Analysis]
42 Kirchberger PC, Ochman H. Resurrection of a global, metagenomically defined gokushovirus. Elife 2020;9:e51599. [PMID: 32101162 DOI: 10.7554/eLife.51599] [Cited by in Crossref: 8] [Cited by in F6Publishing: 6] [Article Influence: 4.0] [Reference Citation Analysis]
43 Trigueros S, Tran T, Sorto N, Newmark J, Colloms SD, Sherratt DJ, Tolmasky ME. mwr Xer site-specific recombination is hypersensitive to DNA supercoiling. Nucleic Acids Res 2009;37:3580-7. [PMID: 19359357 DOI: 10.1093/nar/gkp208] [Cited by in Crossref: 12] [Cited by in F6Publishing: 10] [Article Influence: 0.9] [Reference Citation Analysis]
44 Martínez E, Campos-Gómez J, Barre FX. CTXϕ: Exploring new alternatives in host factor-mediated filamentous phage replications. Bacteriophage 2016;6:e1128512. [PMID: 27607139 DOI: 10.1080/21597081.2015.1128512] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 0.5] [Reference Citation Analysis]
45 Yeh TY. XerD-dependent integration of a novel filamentous phage Cf2 into the Xanthomonas citri genome. Virology 2020;548:160-7. [PMID: 32838937 DOI: 10.1016/j.virol.2020.06.010] [Reference Citation Analysis]
46 Das B. Insights into TLCΦ lysogeny: A twist in the mechanism of IMEX integration. Proc Natl Acad Sci U S A 2019;116:18159-61. [PMID: 31439815 DOI: 10.1073/pnas.1912633116] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
47 Dorman MJ, Dorman CJ. Regulatory Hierarchies Controlling Virulence Gene Expression in Shigella flexneri and Vibrio cholerae. Front Microbiol 2018;9:2686. [PMID: 30473684 DOI: 10.3389/fmicb.2018.02686] [Cited by in Crossref: 16] [Cited by in F6Publishing: 11] [Article Influence: 4.0] [Reference Citation Analysis]
48 Pant A, Anbumani D, Bag S, Mehta O, Kumar P, Saxena S, Nair GB, Das B. Effect of LexA on Chromosomal Integration of CTXϕ in Vibrio cholerae. J Bacteriol 2016;198:268-75. [PMID: 26503849 DOI: 10.1128/JB.00674-15] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 1.0] [Reference Citation Analysis]
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50 Midonet C, Das B, Paly E, Barre FX. XerD-mediated FtsK-independent integration of TLCϕ into the Vibrio cholerae genome. Proc Natl Acad Sci U S A 2014;111:16848-53. [PMID: 25385643 DOI: 10.1073/pnas.1404047111] [Cited by in Crossref: 22] [Cited by in F6Publishing: 19] [Article Influence: 2.8] [Reference Citation Analysis]
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52 Mir T, Huang SH, Kobryn K. The telomere resolvase of the Lyme disease spirochete, Borrelia burgdorferi, promotes DNA single-strand annealing and strand exchange. Nucleic Acids Res 2013;41:10438-48. [PMID: 24049070 DOI: 10.1093/nar/gkt832] [Cited by in Crossref: 14] [Cited by in F6Publishing: 10] [Article Influence: 1.6] [Reference Citation Analysis]
53 Carr CE, Marky LA. Increased Flexibility between Stems of Intramolecular Three-Way Junctions by the Insertion of Bulges. Biophys J 2018;114:2764-74. [PMID: 29925014 DOI: 10.1016/j.bpj.2018.05.001] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
54 Pant A, Bag S, Saha B, Verma J, Kumar P, Banerjee S, Kumar B, Kumar Y, Desigamani A, Maiti S, Maiti TK, Banerjee SK, Bhadra RK, Koley H, Dutta S, Nair GB, Ramamurthy T, Das B. Molecular insights into the genome dynamics and interactions between core and acquired genomes of Vibrio cholerae. Proc Natl Acad Sci U S A 2020;117:23762-73. [PMID: 32873641 DOI: 10.1073/pnas.2006283117] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 3.0] [Reference Citation Analysis]
55 Okada K, Na-Ubol M, Natakuathung W, Roobthaisong A, Maruyama F, Nakagawa I, Chantaroj S, Hamada S. Comparative genomic characterization of a Thailand-Myanmar isolate, MS6, of Vibrio cholerae O1 El Tor, which is phylogenetically related to a "US Gulf Coast" clone. PLoS One 2014;9:e98120. [PMID: 24887199 DOI: 10.1371/journal.pone.0098120] [Cited by in Crossref: 12] [Cited by in F6Publishing: 10] [Article Influence: 1.5] [Reference Citation Analysis]
56 Castillo F, Benmohamed A, Szatmari G. Xer Site Specific Recombination: Double and Single Recombinase Systems. Front Microbiol 2017;8:453. [PMID: 28373867 DOI: 10.3389/fmicb.2017.00453] [Cited by in Crossref: 39] [Cited by in F6Publishing: 41] [Article Influence: 7.8] [Reference Citation Analysis]
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58 Escudero JA, Loot C, Nivina A, Mazel D. The Integron: Adaptation On Demand. Microbiol Spectr 2015;3:MDNA3-0019-2014. [PMID: 26104695 DOI: 10.1128/microbiolspec.MDNA3-0019-2014] [Cited by in Crossref: 32] [Cited by in F6Publishing: 45] [Article Influence: 5.3] [Reference Citation Analysis]
59 Piekarowicz A, Kłyż A, Majchrzak M, Szczêsna E, Piechucki M, Kwiatek A, Maugel TK, Stein DC. Neisseria gonorrhoeae filamentous phage NgoΦ6 is capable of infecting a variety of Gram-negative bacteria. J Virol 2014;88:1002-10. [PMID: 24198404 DOI: 10.1128/JVI.02707-13] [Cited by in Crossref: 14] [Cited by in F6Publishing: 8] [Article Influence: 1.6] [Reference Citation Analysis]
60 Das B, Kumari R, Pant A, Sen Gupta S, Saxena S, Mehta O, Nair GB. A novel, broad-range, CTXΦ-derived stable integrative expression vector for functional studies. J Bacteriol 2014;196:4071-80. [PMID: 25225263 DOI: 10.1128/JB.01966-14] [Cited by in Crossref: 6] [Cited by in F6Publishing: 3] [Article Influence: 0.8] [Reference Citation Analysis]
61 D'Andrea MM, Giani T, D'Arezzo S, Capone A, Petrosillo N, Visca P, Luzzaro F, Rossolini GM. Characterization of pABVA01, a plasmid encoding the OXA-24 carbapenemase from Italian isolates of Acinetobacter baumannii. Antimicrob Agents Chemother 2009;53:3528-33. [PMID: 19487447 DOI: 10.1128/AAC.00178-09] [Cited by in Crossref: 64] [Cited by in F6Publishing: 47] [Article Influence: 4.9] [Reference Citation Analysis]
62 Cossu M, Badel C, Catchpole R, Gadelle D, Marguet E, Barbe V, Forterre P, Oberto J. Flipping chromosomes in deep-sea archaea. PLoS Genet 2017;13:e1006847. [PMID: 28628615 DOI: 10.1371/journal.pgen.1006847] [Cited by in Crossref: 13] [Cited by in F6Publishing: 11] [Article Influence: 2.6] [Reference Citation Analysis]
63 Salgado-Camargo AD, Castro-Jaimes S, Gutierrez-Rios RM, Lozano LF, Altamirano-Pacheco L, Silva-Sanchez J, Pérez-Oseguera Á, Volkow P, Castillo-Ramírez S, Cevallos MA. Structure and Evolution of Acinetobacter baumannii Plasmids. Front Microbiol 2020;11:1283. [PMID: 32625185 DOI: 10.3389/fmicb.2020.01283] [Cited by in Crossref: 14] [Cited by in F6Publishing: 13] [Article Influence: 7.0] [Reference Citation Analysis]
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