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Liu F, Qi E, Wang X, Wang Y, Gao Y, Yu X, Liang P. Preliminary application of robot-assisted teleultrasound-guided interventional system. Abdom Radiol (NY) 2025; 50:2626-2633. [PMID: 39690280 DOI: 10.1007/s00261-024-04719-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Revised: 11/21/2024] [Accepted: 11/22/2024] [Indexed: 12/19/2024]
Abstract
BACKGROUND Teleultrasound has gained significant traction in clinical practice in recent years. However, studies focusing on remote interventional ultrasound remain limited. OBJECTIVES To evaluate the feasibility and accuracy of percutaneous puncture using a robot-assisted teleultrasound-guided interventional system (RTIS). MATERIALS AND METHODS This study was approved by the institutional animal ethics committee and human research review board. Written informed consent was obtained from all patients. Two experienced interventional ultrasound physicians performed percutaneous punctures using both RTIS and conventional ultrasound guidance (CUG) in phantom and swine liver models, as well as in clinical settings. Puncture distance errors and operation durations were compared between the RTIS and CUG groups in the experimental models. For clinical applications, operation duration, success rates, and complications were recorded. RESULTS No significant differences were observed in puncture distance errors between the RTIS and CUG groups in the phantom study (2.85 ± 2.07 mm vs. 1.79 ± 1.93 mm; p = 0.158) or the swine liver study (3.28 ± 1.20 mm vs. 2.56 ± 0.98 mm; p = 0.148). However, puncture operation durations were significantly longer in the RTIS group compared to the CUG group across all scenarios: phantom study (50 ± 19 s vs. 19 ± 7 s; p < 0.001), swine liver study (106 ± 19 s vs. 61 ± 32 s; p = 0.001), and clinical application (200 ± 27.02 s vs. 104.8 ± 33.92 s; p < 0.001). All six patients in the RTIS group and ten patients in the CUG group successfully underwent percutaneous puncture without complications. CONCLUSION The RTIS demonstrated safety and feasibility for percutaneous puncture, providing comparable accuracy to conventional methods. CLINICAL RELEVANCE STATEMENT The RTIS offers a safe and effective solution for percutaneous puncture, with the potential to address the scarcity of medical resources in remote and underserved regions.
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Affiliation(s)
- Fangyi Liu
- Department of Interventional Ultrasound,The Fifth Medical Center, Chinese PLA General Hospital, Beijing, China, 100853
| | - Erpeng Qi
- Department of Interventional Ultrasound,The Fifth Medical Center, Chinese PLA General Hospital, Beijing, China, 100853
| | - Xiaopeng Wang
- Department ofGastroenterology, Chinese PLA 305 Hospital, Beijing, China, 100034
| | - Yan Wang
- Department of Interventional Ultrasound,The Fifth Medical Center, Chinese PLA General Hospital, Beijing, China, 100853
| | - Yuejuan Gao
- Department of Interventional Ultrasound,The Fifth Medical Center, Chinese PLA General Hospital, Beijing, China, 100853
| | - Xiaoling Yu
- Department of Interventional Ultrasound,The Fifth Medical Center, Chinese PLA General Hospital, Beijing, China, 100853
| | - Ping Liang
- Department of Interventional Ultrasound,The Fifth Medical Center, Chinese PLA General Hospital, Beijing, China, 100853.
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2
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Khandelwal Y, Ora M, Jain B, Dixit M, Singh P, Khan A, Nath A, Agarwal V, Gambhir S. Post-COVID-19 lung disease: utility of biochemical and imaging markers in uncovering residual lung inflammation and monitoring anti-inflammatory therapy, a prospective study. Eur J Nucl Med Mol Imaging 2025:10.1007/s00259-025-07297-w. [PMID: 40355745 DOI: 10.1007/s00259-025-07297-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2025] [Accepted: 04/21/2025] [Indexed: 05/14/2025]
Abstract
PURPOSE Post-COVID-19 lung disease (PCLD) is a significant concern following the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. PCLD encompasses persistent debilitating respiratory symptoms and radiological changes beyond the acute disease phase. It highlights the ongoing search to identify and manage lingering diseases. This prospective study utilizes F18-Fludeoxyglucose (FDG) PET/CT to identify residual inflammatory lung lesions in PCLD. Treatment response was assessed after anti-inflammatory and antifibrotic therapies. MATERIALS AND METHODS Thirty patients post-severe COVID-19 pneumonia enrolled. They underwent baseline 18F-FDG PET/CT scans to unveil residual lung inflammation lesions on FDG and CT. They received antifibrotic (Pirfenidone) and anti-inflammatory (Methylprednisolone) drugs for 6-12 weeks. They were followed up for clinical, biochemical, and imaging treatment responses. RESULTS Baseline 18F-FDG PET/CT revealed ongoing lung inflammation in all PCLD (mean SUVmax: 3.8 ± 2.3 and number of segments: 8±3 ). The mean CT severity score was 17.7 ± 3.4 with moderate (n = 16) or severe (n = 14) disease involvement. Mild, moderate, and severe 18F-FDG PET/CT categories were noted in the 8, 14, and 8 patients, respectively. Following treatment, a PET scan showed a significant decrease in disease extent (segments) and severity (FDG uptake) and an improvement in disease grading on imaging (97% of patients). In PET concordance, there was a significant clinical and radiological improvement with a fall in inflammatory markers (p < 0.005). Serum Ferritin and total leukocyte counts were significantly associated with PCLD severity on 18F-FDG PET/CT(p < 0.05). CONCLUSION This prospective study identifies and quantifies ongoing significant residual lung inflammation in PCLD on 18F-FDG PET/CT. Anti-inflammatory and antifibrotic drug therapy led to clinical and radiological improvement. 18F-FDG PET/CT as a non-invasive biomarker helped manage and follow up PCLD patients. CLINICAL TRIAL NUMBER Not applicable.
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Affiliation(s)
| | - Manish Ora
- Department of Nuclear Medicine, SGPGI, Lucknow, India
| | - Bela Jain
- Department of Nuclear Medicine, AIIMS, New Delhi, India
| | - Manish Dixit
- Department of Nuclear Medicine, SGPGI, Lucknow, India
| | - Prakash Singh
- Department of Nuclear Medicine, KGMC, Lucknow, India
| | - Ajmal Khan
- Department of Pulmonary Medicine, SGPGI, Lucknow, India
| | - Alok Nath
- Department of Pulmonary Medicine, SGPGI, Lucknow, India
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Bayrakçi S, Ateş Ayhan N, Firat A, Bulut Y, Seydaoğlu G, Karakoç E, Baydar Toprak O, Özyilmaz E. The role of early lung ultrasound score measurement in determining prognosis in COVID-19 ICU patients with respiratory failure. Medicine (Baltimore) 2025; 104:e42010. [PMID: 40295260 PMCID: PMC12040021 DOI: 10.1097/md.0000000000042010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/03/2025] [Revised: 03/12/2025] [Accepted: 03/13/2025] [Indexed: 04/30/2025] Open
Abstract
The utility of lung ultrasound (LUS) in evaluation of coronavirus disease (COVID-19) with pneumonia has not yet been elucidated. The main objective of study is to determine whether LUS can effectively predict the prognosis in intensive care unit (ICU), including mortality and disease severity. It's also aimed to determine whether LUS will provide a threshold value to predict mortality in COVID-19 cases. In this prospective observational study, 90 patients admitted to the ICU with COVID-19 pneumonia and respiratory failure were included. A LUS cutoff score of 21 on admission demonstrated sensitivity of 97% and specificity of 68% for predicting mortality. Baseline LUS scores were found to be significantly higher in nonsurvivor group(P < .001) whereas APACHE II, sequential organ failure assessment (SOFA), charlson comorbidity index (CCI), nutrition risk in critically ill (NUTRIC) scores, serum lactate, procalcitonin, ferritin, D-dimer levels and heart rate were also significantly found to be higher in nonsurvivor group(P < .05). Overall mean progression-free-survival (PFS) rate was significantly longer in patients with LUS scores < 21, (mean-survival 23.8 days) compared to those with LUS scores ≥ 21 (mean-survival 12.5 days) (P < .05). Multivariate Cox-regression analysis identified a LUS score ≥ 21 was an independent risk factor for mortality during ICU stay (P = .002). LUS performed at ICU admission can serve as a prognostic indicator for patients with COVID-19 pneumonia. By identifying high-risk groups and monitoring these patients closely using LUS, healthcare providers may enhance resource utilization and potentially improve patient outcomes.
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Affiliation(s)
- Sinem Bayrakçi
- Department of ICU, Gaziantep City Hospital, Gaziantep, Turkey
| | - Nazire Ateş Ayhan
- Department of ICU, Sanliurfa Training and Researh Hospital, Sanliurfa, Turkey
| | - Ahmet Firat
- Department of ICU, Aksaray Training and Researh Hospital, Aksaray, Turkey
| | - Yurdaer Bulut
- Department of ICU, Adana Baskent University Seyhan Application and Research Hospital, Adana, Turkey
| | - Gülşah Seydaoğlu
- Department of Biostatistics, Cukurova University Faculty of Medicine, Adana, Turkey
| | - Emre Karakoç
- Department of Internal Medicine and ICU, Cukurova University Faculty of Medicine, Adana, Turkey
| | - Oya Baydar Toprak
- Department of Chest Diseases, Cukurova University Faculty of Medicine, Adana, Turkey
| | - Ezgi Özyilmaz
- Department of Chest Diseases and ICU, Cukurova University Faculty of Medicine, Adana, Turkey
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Padmavathi V, Ganesan K. Metaheuristic optimizers integrated with vision transformer model for severity detection and classification via multimodal COVID-19 images. Sci Rep 2025; 15:13941. [PMID: 40263404 PMCID: PMC12015488 DOI: 10.1038/s41598-025-98593-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2024] [Accepted: 04/14/2025] [Indexed: 04/24/2025] Open
Abstract
This study introduces a novel hybrid framework for classifying COVID-19 severity using chest X-rays (CXR) and computed tomography (CT) scans by integrating Vision Transformers (ViT) with metaheuristic optimization techniques. The framework employs the Grey Wolf Optimizer (GWO) for hyperparameter tuning and Particle Swarm Optimization (PSO) for feature selection, leveraging the ViT model's self-attention mechanism to extract global and local image features crucial for severity classification. A multi-phase classification strategy refines predictions by progressively distinguishing normal, mild, moderate, and severe COVID-19 cases. The proposed GWO_ViT_PSO_MLP model achieves outstanding accuracy, with 99.14% for 2-class CXR classification and 98.89% for 2-class CT classification, outperforming traditional CNN-based approaches such as ResNet34 (84.22%) and VGG19 (93.24%). Furthermore, it demonstrates superior performance in multi-class severity classification, especially in differentiating challenging cases like mild and moderate infections. Compared to existing studies, this framework significantly improves accuracy and computational efficiency, highlighting its potential as a scalable and reliable solution for automated COVID-19 severity detection in clinical applications.
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Affiliation(s)
- V Padmavathi
- Department of Biomedical Engineering, CEG Campus, Anna University, Chennai, 600025, India
| | - Kavitha Ganesan
- Department of Biomedical Engineering, CEG Campus, Anna University, Chennai, 600025, India.
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Tomos I, Antonogiannaki EM, Dimakopoulou K, Raptakis T, Apollonatou V, Kallieri M, Argentos S, Lampadakis S, Blizou M, Krouskos A, Karakatsani A, Manali E, Loukides S, Papiris S. The prognostic role of lung ultrasound in hospitalised patients with COVID-19. Correlation with chest CT findings and clinical markers of severity. Expert Rev Respir Med 2025; 19:363-370. [PMID: 40007128 DOI: 10.1080/17476348.2025.2471776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2024] [Revised: 02/08/2025] [Accepted: 02/21/2025] [Indexed: 02/27/2025]
Abstract
BACKGROUND The use of lung ultrasound (LUS) has recently become vital in the diagnosis and prognosis of various respiratory diseases. Its role in COVID-19 requires further investigation. RESEARCH DESIGN AND METHODS Twenty-five consecutive, non-ICU hospitalized COVID-19 patients were included. LUS was performed on admission and sequentially every 3 days at 8 points in the chest. Based on the LUS findings a score was designed. Logarithmic regression models and ROC curve analysis were applied. RESULTS A statistically significant positive correlation was found between LUS score at admission and the severity of SARS-COV-2 infection. Higher LUS score was significantly associated with lower PaO2/FiO2 ratio, use of HFNC, longer hospitalization and greater extent of chest CT infiltrates. A significant association between LUS score and risk of death or intubation or HFNC was found. For one point of increase in the score, risk of death or intubation or HFNC increased 1.93-fold (95% CI 1.02 to 3.65). The predictive role of the score was very satisfactory (area under the ROC curve = 0.87). CONCLUSIONS Lung ultrasound findings were significantly positively associated with clinical and radiological markers of severity of SARS-CoV-2 pneumonia. It therefore constitutes a promising and reliable technique for assessing pneumonia, comparable to chest CT.
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Affiliation(s)
- Ioannis Tomos
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Elvira Markela Antonogiannaki
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Konstantina Dimakopoulou
- Department of Hygiene, Epidemiology and Medical Statistics, National and Kapodistrian University of Athens, Medical School, Athens, Greece
| | - Thomas Raptakis
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Vasiliki Apollonatou
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Maria Kallieri
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Stylianos Argentos
- 2nd Department of Radiology, ATTIKON University Hospital, National and Kapodistrian University of Athens, Athens, Greece
| | - Stefanos Lampadakis
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Myrto Blizou
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Antonis Krouskos
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Anna Karakatsani
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Effrosyni Manali
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Stylianos Loukides
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Spyros Papiris
- 2nd Pulmonary Medicine Department, ATTIKON University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
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Bucher AM, Behrend J, Ehrengut C, Müller L, Emrich T, Schramm D, Akinina A, Kloeckner R, Sieren M, Berkel L, Kuhl C, Sähn MJ, Fink MA, Móré D, Melekh B, Kardas H, Meinel FG, Schön H, Kornemann N, Renz DM, Lubina N, Wollny C, Both M, Watkinson J, Stöcklein S, Mittermeier A, Abaci G, May M, Siegler L, Penzkofer T, Lindholz M, Balzer M, Kim MS, Römer C, Wrede N, Götz S, Breckow J, Borggrefe J, Meyer HJ, Surov A. CT-Defined Pectoralis Muscle Density Predicts 30-Day Mortality in Hospitalized Patients with COVID-19: A Nationwide Multicenter Study. Acad Radiol 2025; 32:2133-2140. [PMID: 39675998 DOI: 10.1016/j.acra.2024.11.054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2024] [Revised: 11/21/2024] [Accepted: 11/21/2024] [Indexed: 12/17/2024]
Abstract
RATIONALE AND OBJECTIVES The prognostic role of computed tomography (CT)-defined skeletal muscle features in COVID-19 is still under investigation. The aim of the present study was to evaluate the prognostic role of CT-defined skeletal muscle area and density in patients with COVID-19 in a multicenter setting. MATERIALS AND METHODS This retrospective study is a part of the German multicenter project RACOON (Radiological Cooperative Network of the COVID-19 pandemic). The acquired sample included 1379 patients, 389 (28.2%) women and 990 (71.8%) men. In each case, chest CT was analyzed and pectoralis muscle area and density were calculated. Data were analyzed by means of descriptive statistics. Group differences were calculated using the Mann-Whitney-U test and Fisher's exact test. Univariable and multivariable logistic regression analyses were performed. RESULTS The 30-day mortality was 17.9%. Using median values as thresholds, low pectoralis muscle density (LPMD) was a strong and independent predictor of 30-day mortality, HR=2.97, 95%-CI: 1.52-5.80, p=0.001. Also in male patients, LPMD predicted independently 30-day mortality, HR=2.96, 95%-CI: 1.42-6.18, p=0.004. In female patients, the analyzed pectoralis muscle parameters did not predict 30-day mortality. For patients under 60 years of age, LPMD was strongly associated with 30-day mortality, HR=2.72, 95%-CI: 1.17;6.30, p=0.019. For patients over 60 years of age, pectoralis muscle parameters could not predict 30-day mortality. CONCLUSION In male patients with COVID-19, low pectoralis muscle density is strongly associated with 30-day mortality and can be used for risk stratification. In female patients with COVID-19, pectoralis muscle parameters cannot predict 30-day mortality.
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Affiliation(s)
- Andreas Michael Bucher
- Institute of Diagnostic and Interventional Radiology, University Hospital Frankfurt, Frankfurt, Germany (A.M.B., J.B.)
| | - Julius Behrend
- Institute of Diagnostic and Interventional Radiology, University Hospital Frankfurt, Frankfurt, Germany (A.M.B., J.B.)
| | - Constantin Ehrengut
- Department of Radiology, University Hospital of Leipzig, Leipzig, Germany (C.E., H.J.M.)
| | - Lukas Müller
- Department of Diagnostic and Interventional Radiology, University Medical Center Mainz, Mainz, Germany (L.M., T.E.)
| | - Tilman Emrich
- Department of Diagnostic and Interventional Radiology, University Medical Center Mainz, Mainz, Germany (L.M., T.E.)
| | - Dominik Schramm
- Department of Radiology, University Hospital of Halle, Halle, Germany (D.S., A.A.)
| | - Alena Akinina
- Department of Radiology, University Hospital of Halle, Halle, Germany (D.S., A.A.)
| | - Roman Kloeckner
- Department of Radiology, University Hospital Schleswig-Holstein-Campus Luebeck, Lübeck, Germany (R.K., M.S., L.B.)
| | - Malte Sieren
- Department of Radiology, University Hospital Schleswig-Holstein-Campus Luebeck, Lübeck, Germany (R.K., M.S., L.B.)
| | - Lennart Berkel
- Department of Radiology, University Hospital Schleswig-Holstein-Campus Luebeck, Lübeck, Germany (R.K., M.S., L.B.)
| | - Christiane Kuhl
- Department of Diagnostic Interventional Radiology, University Hospital RWTH Aachen, Aachen, Germany (C.K., M.J.S.)
| | - Marwin-Jonathan Sähn
- Department of Diagnostic Interventional Radiology, University Hospital RWTH Aachen, Aachen, Germany (C.K., M.J.S.)
| | - Matthias A Fink
- Clinic for Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany (M.A.F., D.M.)
| | - Dorottya Móré
- Clinic for Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany (M.A.F., D.M.)
| | - Bohdan Melekh
- Department of Radiology and Nuclear Medicine, University Hospital of Magdeburg, Magdeburg, Germany (B.M., H.K.)
| | - Hakan Kardas
- Department of Radiology and Nuclear Medicine, University Hospital of Magdeburg, Magdeburg, Germany (B.M., H.K.)
| | - Felix G Meinel
- Department of Radiology, University Hospital of Rostock, Rostock, Germany (F.G.M., H.S.)
| | - Hanna Schön
- Department of Radiology, University Hospital of Rostock, Rostock, Germany (F.G.M., H.S.)
| | - Norman Kornemann
- Department of Radiology, Hannover Medical School, Hanover, Germany (N.K., D.M.R.)
| | - Diane Miriam Renz
- Department of Radiology, Hannover Medical School, Hanover, Germany (N.K., D.M.R.)
| | - Nora Lubina
- Clinic for Diagnostic and Interventional Radiology and Neuroradiology, University Hospital of Augsburg, Augsburg, Germany (L.N., W.C.)
| | - Claudia Wollny
- Clinic for Diagnostic and Interventional Radiology and Neuroradiology, University Hospital of Augsburg, Augsburg, Germany (L.N., W.C.)
| | - Marcus Both
- Department of Radiology, University Hospital of Kiel, Kiel, Germany (M.B., J.W.)
| | - Joe Watkinson
- Department of Radiology, University Hospital of Kiel, Kiel, Germany (M.B., J.W.)
| | - Sophia Stöcklein
- Department of Radiology, University Hospital of the Ludwig-Maximilian University Munich, Munich, Germany (S.S., A.M., G.A.)
| | - Andreas Mittermeier
- Department of Radiology, University Hospital of the Ludwig-Maximilian University Munich, Munich, Germany (S.S., A.M., G.A.)
| | - Gizem Abaci
- Department of Radiology, University Hospital of the Ludwig-Maximilian University Munich, Munich, Germany (S.S., A.M., G.A.)
| | - Matthias May
- Department of Radiology, University Hospital of Erlangen, Erlangen, Germany (M.M., L.S.)
| | - Lisa Siegler
- Department of Radiology, University Hospital of Erlangen, Erlangen, Germany (M.M., L.S.)
| | - Tobias Penzkofer
- Department of Radiology, University Hospital of Berlin, Berlin, Germany (T.P., M.L.)
| | - Maximilian Lindholz
- Department of Radiology, University Hospital of Berlin, Berlin, Germany (T.P., M.L.)
| | - Miriam Balzer
- Institute of Diagnostic and Interventional Radiology and Neuroradiology, University Hospital Essen, Essen, Germany (M.B., M.S.K.)
| | - Moon-Sung Kim
- Institute of Diagnostic and Interventional Radiology and Neuroradiology, University Hospital Essen, Essen, Germany (M.B., M.S.K.)
| | - Christian Römer
- Clinic for Radiology, University Hospital of Münster, Münster, Germany (C.R., N.W.)
| | - Niklas Wrede
- Clinic for Radiology, University Hospital of Münster, Münster, Germany (C.R., N.W.)
| | - Sophie Götz
- Department of Radiology, University Hospital of Hamburg, Hamburg, Germany (S.G., J.B.)
| | - Julia Breckow
- Department of Radiology, University Hospital of Hamburg, Hamburg, Germany (S.G., J.B.)
| | - Jan Borggrefe
- Institute of Radiology, Neuroradiology and Nuclear Medicine Minden, Ruhr-University-Bochum, Bochum, Germany (J.B., A.S.)
| | - Hans Jonas Meyer
- Department of Radiology, University Hospital of Leipzig, Leipzig, Germany (C.E., H.J.M.)
| | - Alexey Surov
- Institute of Radiology, Neuroradiology and Nuclear Medicine Minden, Ruhr-University-Bochum, Bochum, Germany (J.B., A.S.).
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7
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Lin YC, Fang YHD. Classification of the ICU Admission for COVID-19 Patients with Transfer Learning Models Using Chest X-Ray Images. Diagnostics (Basel) 2025; 15:845. [PMID: 40218195 PMCID: PMC11989104 DOI: 10.3390/diagnostics15070845] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2025] [Revised: 03/08/2025] [Accepted: 03/24/2025] [Indexed: 04/14/2025] Open
Abstract
Objectives: Predicting intensive care unit (ICU) admissions during pandemic outbreaks such as COVID-19 can assist clinicians in early intervention and the better allocation of medical resources. Artificial intelligence (AI) tools are promising for this task, but their development can be hindered by the limited availability of training data. This study aims to explore model development strategies in data-limited scenarios, specifically in detecting the need for ICU admission using chest X-rays of COVID-19 patients by leveraging transfer learning and data extension to improve model performance. Methods: We explored convolutional neural networks (CNNs) pre-trained on either natural images or chest X-rays, fine-tuning them on a relatively limited dataset (COVID-19-NY-SBU, n = 899) of lung-segmented X-ray images for ICU admission classification. To further address data scarcity, we introduced a dataset extension strategy that integrates an additional dataset (MIDRC-RICORD-1c, n = 417) with different but clinically relevant labels. Results: The TorchX-SBU-RSNA and ELIXR-SBU-RSNA models, leveraging X-ray-pre-trained models with our training data extension approach, enhanced ICU admission classification performance from a baseline AUC of 0.66 (56% sensitivity and 68% specificity) to AUCs of 0.77-0.78 (58-62% sensitivity and 78-80% specificity). The gradient-weighted class activation mapping (Grad-CAM) analysis demonstrated that the TorchX-SBU-RSNA model focused more precisely on the relevant lung regions and reduced the distractions from non-relevant areas compared to the natural image-pre-trained model without data expansion. Conclusions: This study demonstrates the benefits of medical image-specific pre-training and strategic dataset expansion in enhancing the model performance of imaging AI models. Moreover, this approach demonstrates the potential of using diverse but limited data sources to alleviate the limitations of model development for medical imaging AI. The developed AI models and training strategies may facilitate more effective and efficient patient management and resource allocation in future outbreaks of infectious respiratory diseases.
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Affiliation(s)
- Yun-Chi Lin
- Department of Biomedical Engineering, University of Alabama at Birmingham, Birmingham, AL 35294, USA;
| | - Yu-Hua Dean Fang
- Department of Radiology, Heersink School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35233, USA
- Department of Neurology, Heersink School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35233, USA
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8
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Uzel FI, Peker Y, Atceken Z, Karatas F, Atasoy C, Caglayan B. Association of Pulmonary Involvement at Baseline with Exercise Intolerance and Worse Physical Functioning 8 Months Following COVID-19 Pneumonia. J Clin Med 2025; 14:475. [PMID: 39860481 PMCID: PMC11765862 DOI: 10.3390/jcm14020475] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2024] [Revised: 01/06/2025] [Accepted: 01/08/2025] [Indexed: 01/27/2025] Open
Abstract
Objectives: We aimed to describe the cardiopulmonary function during exercise and the health-related quality of life (HRQoL) in patients with a history of COVID-19 pneumonia, stratified by chest computed tomography (CT) findings at baseline. Methods: Among 77 consecutive patients with COVID-19 who were discharged from the Pulmonology Ward between March 2020 and April 2021, 28 (mean age 54.3 ± 8.6 years, 8 females) agreed to participate to the current study. The participants were analyzed in two groups based on pulmonary involvement (PI) at baseline chest CT applying a threshold of 25%. A consequent artificial intelligence (AI)-guided total opacity score (TOS) was calculated in a subgroup of 22 patients. A cardiopulmonary exercise test (CPET) was conducted on average 8.4 (±1.9) months after discharge from the hospital. HRQoL was defined using the short-form (SF-36) questionnaire. The primary outcome was exercise intolerance that was defined as a peak oxygen uptake (V'O2peak) < 80% predicted. Secondary outcomes were ventilatory limitation, defined as breathing reserve < 15%, circulatory limitation, defined as oxygen pulse predicted below 80%, and deconditioning, defined as exercise intolerance in the absence of ventilatory and circulatory limitations. Other secondary outcomes included the SF-36 domains. Results: In all, 15 patients had at least 25% PI (53.6%) at baseline chest CT. Exercise intolerance was observed in ten patients (35.7%), six due to deconditioning and four due to circulatory limitation; none had ventilatory limitation. AI-guided TOS was 30.1 ± 24.4% vs. 6.1 ± 4.8% (p < 0.001) at baseline, and 1.7 ± 3.0% vs. 0.2 ± 0.7% (nonsignificant) at follow-up in high and low PI groups, respectively. The physical functioning (PF) domain score of the SF-36 questionnaire was 66.3 ± 19.4 vs. 85.0 ± 13.1 in high and low PI groups, respectively (p = 0.007). Other SF-36 domains did not differ significantly between the groups. A high PI at baseline was inversely correlated with V'O2peak (standardized β coefficient = -0.436; 95% CI -26.1; -0.7; p = 0.040) and with PF scores (standardized β coefficient -0.654; 95% CI -41.3; -7.6; p = 0.006) adjusted for age, sex, body mass index and lung diffusion capacity. Conclusions: One-third of participants experienced exercise intolerance eight months after COVID-19 pneumonia. A higher PI at baseline was significantly associated with exercise intolerance and PF. Notwithstanding, the radiological PI was resolved, and the exercise intolerance was mainly explained not by ventilatory limitation but by circulatory limitation and deconditioning.
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Affiliation(s)
- Fatma Isil Uzel
- Department of Pulmonary Medicine, School of Medicine, Koc University, Istanbul 34010, Türkiye; (F.I.U.); (F.K.)
| | - Yüksel Peker
- Department of Pulmonary Medicine, School of Medicine, Koc University, Istanbul 34010, Türkiye; (F.I.U.); (F.K.)
- Department of Molecular and Clinical Medicine, Sahlgrenska Academy, University of Gothenburg, 40530 Gothenburg, Sweden
- Department of Clinical Sciences, Respiratory Medicine and Allergology, Faculty of Medicine, Lund University, 22185 Lund, Sweden
- Division of Pulmonary, Allergy, and Critical Care Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA
| | - Zeynep Atceken
- Department of Radiology, Koc University School of Medicine, Istanbul 34010, Türkiye; (Z.A.); (C.A.)
| | - Ferhan Karatas
- Department of Pulmonary Medicine, School of Medicine, Koc University, Istanbul 34010, Türkiye; (F.I.U.); (F.K.)
| | - Cetin Atasoy
- Department of Radiology, Koc University School of Medicine, Istanbul 34010, Türkiye; (Z.A.); (C.A.)
| | - Benan Caglayan
- Department of Pulmonary Medicine, Istanbul Oncology Hospital, Istanbul 34846, Türkiye;
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9
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Bucher AM, Dietz J, Ehrengut C, Müller L, Schramm D, Akinina A, Drechsel M, Kloeckner R, Sieren M, Isfort P, Sähn MJ, Fink MA, Móré D, Melekh B, Meinel FG, Schön H, May MS, Siegler L, Münzfeld H, Ruppel R, Penzkofer T, Kim MS, Balzer M, Borggrefe J, Meyer HJ, Surov A. The prognostic relevance of pleural effusion in patients with COVID-19 - A German multicenter study. Clin Imaging 2025; 117:110303. [PMID: 39532042 DOI: 10.1016/j.clinimag.2024.110303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2024] [Revised: 09/09/2024] [Accepted: 09/13/2024] [Indexed: 11/16/2024]
Abstract
PURPOSE This study evaluates the prognostic significance of pleural effusion (PE) in COVID-19 patients across thirteen centers in Germany, aiming to clarify its role in predicting clinical outcomes. METHODS In this retrospective analysis within the RACOON project (Radiological Cooperative Network of the COVID-19 pandemic), 1183 patients (29.3 % women, 70.7 % men) underwent chest CT to assess PE. We investigated PE's association with 30-day mortality, ICU admission, and the need for mechanical ventilation. RESULTS PE was detected in 31.5 % of patients, showing a significant correlation with 30-day mortality (47.5 % in non-survivors vs. 27.3 % in survivors, p < 0.001), with a hazard ratio of 2.22 (95 % CI 1.65-2.99, p < 0.001). No significant association was found between PE volume or density and mortality. ICU admissions were noted in 46.8 % of patients, while mechanical ventilation was required for 26.7 %. CONCLUSION Pleural effusion is present in a significant portion of COVID-19 patients and independently predicts increased 30-day mortality, underscoring its value as a prognostic marker. Its identification, irrespective of volume or density, should be a priority in radiological reports to guide clinical decision-making.
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Affiliation(s)
- Andreas Michael Bucher
- Department of Diagnostic and Interventional Radiology, Goethe University Hospital Frankfurt, 60590, Frankfurt Am Main, Germany.
| | - Julia Dietz
- Department of Diagnostic and Interventional Radiology, Goethe University Hospital Frankfurt, 60590, Frankfurt Am Main, Germany.
| | | | - Lukas Müller
- Department of Diagnostic and Interventional Radiology, University Medical Center Mainz, Mainz, Germany.
| | - Dominik Schramm
- Department of Radiology University Hospital of Halle, Halle, Germany.
| | - Alena Akinina
- Department of Radiology University Hospital of Halle, Halle, Germany.
| | - Michelle Drechsel
- Department of Radiology University Hospital of Halle, Halle, Germany.
| | - Roman Kloeckner
- Department of Radiology University Hospital Schleswig-Holstein-Campus Luebeck, Luebeck, Germany.
| | - Malte Sieren
- Department of Radiology University Hospital Schleswig-Holstein-Campus Luebeck, Luebeck, Germany.
| | - Peter Isfort
- Department of Radiology University Hospital of Aachen, Aachen, Germany.
| | | | - Matthias A Fink
- Clinic for Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany.
| | - Dorottya Móré
- Clinic for Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany.
| | - Bohdan Melekh
- Department of Radiology and Nuclear Medicine, University Hospital of Magdeburg, Magdeburg, Germany.
| | - Felix G Meinel
- Department of Radiology University Hospital of Rostock, Rostock, Germany.
| | - Hanna Schön
- Department of Radiology University Hospital of Rostock, Rostock, Germany.
| | | | - Lisa Siegler
- Department of Radiology University Hospital of Erlangen, Erlangen, Germany.
| | - Hanna Münzfeld
- Department of Radiology University Hospital of Berlin, Berlin, Germany.
| | - Richard Ruppel
- Department of Radiology University Hospital of Berlin, Berlin, Germany.
| | - Tobias Penzkofer
- Department of Radiology University Hospital of Berlin, Berlin, Germany.
| | - Moon-Sung Kim
- Institute of Diagnostic and Interventional Radiology and Neuroradiology, University Hospital Essen, Essen, Germany.
| | - Miriam Balzer
- Institute of Diagnostic and Interventional Radiology and Neuroradiology, University Hospital Essen, Essen, Germany.
| | - Jan Borggrefe
- Department of Radiology, Neuroradiology and Nuclear Medicine, Johannes Wesling University Hospital, Ruhr-University-Bochum, Bochum, Germany.
| | - Hans Jonas Meyer
- Department of Radiology, University Hospital of Leipzig, Leipzig, Germany..
| | - Alexey Surov
- Department of Radiology, Neuroradiology and Nuclear Medicine, Johannes Wesling University Hospital, Ruhr-University-Bochum, Bochum, Germany.
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10
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Turut H, Ozcelik N, Copur Cicek A, Tuluce K, Sevilgen G, Sakin M, Erdivanli B, Klisic A, Mercantepe F. Rates of PCR Positivity of Pleural Drainage Fluid in COVID-19 Patients: Is It Expected? Life (Basel) 2024; 14:1625. [PMID: 39768333 PMCID: PMC11676780 DOI: 10.3390/life14121625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2024] [Revised: 12/03/2024] [Accepted: 12/04/2024] [Indexed: 01/11/2025] Open
Abstract
BACKGROUND Tube thoracostomy, utilized through conventional methodologies in the context of pleural disorders such as pleural effusion and pneumothorax, constitutes one of the primary therapeutic interventions. Nonetheless, it is imperative to recognize that invasive procedures, including tube thoracostomy, are classified as aerosol-generating activities during the management of pleural conditions in patients afflicted with COVID-19, thus raising substantial concerns regarding the potential exposure of healthcare personnel to the virus. The objective of this investigation was to assess the SARS-CoV-2 viral load by detecting viral RNA in pleural drainage specimens from patients who underwent tube thoracostomy due to either pleural effusion or pneumothorax. METHODS In this single-center prospective cross-sectional analysis, a real-time reverse transcriptase (RT) polymerase chain reaction (PCR) assay was employed to conduct swab tests for the qualitative identification of nucleic acid from SARS-CoV-2 in pleural fluids acquired during tube thoracostomy between August 2021 and December 2021. RESULTS All pleural drainage specimens from 21 patients who tested positive for COVID-19 via nasopharyngeal PCR, of which 14 underwent tube thoracostomy due to pneumothorax, 4 due to both pneumothorax and pleural effusion, and 3 due to pleural effusion, were found to be negative for SARS-CoV-2 RNA. Moreover, individuals exhibiting pleural effusion were admitted to the intensive care unit with a notably higher incidence, yet demonstrated significantly more radiological anomalies in patients diagnosed with pneumothorax. CONCLUSIONS The current findings, inclusive of the results from this study, do not furnish scientific evidence to support the notion that SARS-CoV-2 is transmitted via aerosolization during tube thoracostomy, and it remains uncertain whether the virus can be adequately contained within pleural fluids.
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Affiliation(s)
- Hasan Turut
- Department of Thoracic Surgery, Faculty of Medicine, Recep Tayyip Erdogan University, 53100 Rize, Turkey; (K.T.); (G.S.)
| | - Neslihan Ozcelik
- Department of Chest Diseases, Faculty of Medicine, Recep Tayyip Erdogan University, 53100 Rize, Turkey;
| | - Aysegul Copur Cicek
- Department of Medical Microbiology, Faculty of Medicine, Istanbul Medipol University, 34810 Istanbul, Turkey;
| | - Kerim Tuluce
- Department of Thoracic Surgery, Faculty of Medicine, Recep Tayyip Erdogan University, 53100 Rize, Turkey; (K.T.); (G.S.)
| | - Gokcen Sevilgen
- Department of Thoracic Surgery, Faculty of Medicine, Recep Tayyip Erdogan University, 53100 Rize, Turkey; (K.T.); (G.S.)
| | - Mustafa Sakin
- Department of Anesthesiology, Rize State Hospital, 53020 Rize, Turkey;
| | - Basar Erdivanli
- Department of Anesthesiology, Faculty of Medicine, Recep Tayyip Erdogan University, 53100 Rize, Turkey;
| | - Aleksandra Klisic
- Faculty of Medicine, University of Montenegro, 81000 Podgorica, Montenegro;
- Center for Laboratory Diagnostics, Primary Health Care Center, 81000 Podgorica, Montenegro
| | - Filiz Mercantepe
- Department of Endocrinology and Metabolism, Faculty of Medicine, Recep Tayyip Erdogan University, 53100 Rize, Turkey
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11
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Fanni SC, Colligiani L, Volpi F, Novaria L, Tonerini M, Airoldi C, Plataroti D, Bartholmai BJ, De Liperi A, Neri E, Romei C. Quantitative Chest CT Analysis: Three Different Approaches to Quantify the Burden of Viral Interstitial Pneumonia Using COVID-19 as a Paradigm. J Clin Med 2024; 13:7308. [PMID: 39685766 DOI: 10.3390/jcm13237308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2024] [Revised: 11/19/2024] [Accepted: 11/27/2024] [Indexed: 12/18/2024] Open
Abstract
Objectives: To investigate the relationship between COVID-19 pneumonia outcomes and three chest CT analysis approaches. Methods: Patients with COVID-19 pneumonia who underwent chest CT were included and divided into survivors/non-survivors and intubated/not-intubated. Chest CTs were analyzed through a (1) Total Severity Score visually quantified by an emergency (TSS1) and a thoracic radiologist (TSS2); (2) density mask technique quantifying normal parenchyma (DM_Norm 1) and ground glass opacities (DM_GGO1) repeated after the manual delineation of consolidations (DM_Norm2, DM_GGO2, DM_Consolidation); (3) texture analysis quantifying normal parenchyma (TA_Norm) and interstitial lung disease (TA_ILD). Association with outcomes was assessed through Chi-square and the Mann-Whitney test. The TSS inter-reader variability was assessed through intraclass correlation coefficient (ICC) and Bland-Altman analysis. The relationship between quantitative variables and outcomes was investigated through multivariate logistic regression analysis. Variables correlation was investigated using Spearman analysis. Results: Overall, 192 patients (mean age, 66.8 ± 15.4 years) were included. TSS was significantly higher in intubated patients but only TSS1 in survivors. TSS presented an ICC of 0.83 (0.76; 0.88) and a bias (LOA) of 1.55 (-4.69, 7.78). DM_Consolidation showed the greatest median difference between survivors/not survivors (p = 0.002). The strongest independent predictor for mortality was DM_Consolidation (AUC 0.688), while the strongest independent predictor for the intensity of care was TSS2 (0.7498). DM_Norm 2 was the singular feature independently associated with both the outcomes. DM_GGO1 strongly correlated with TA_ILD (ρ = 0.977). Conclusions: The DM technique and TA achieved consistent measurements and a better correlation with patient outcomes.
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Affiliation(s)
- Salvatore Claudio Fanni
- Department of Translational Research, Academic Radiology, University of Pisa, 56126 Pisa, Italy
| | - Leonardo Colligiani
- Department of Translational Research, Academic Radiology, University of Pisa, 56126 Pisa, Italy
| | - Federica Volpi
- Department of Translational Research, Academic Radiology, University of Pisa, 56126 Pisa, Italy
| | - Lisa Novaria
- 2nd Radiology Unit, Department of Diagnostic Imaging, Pisa University-Hospital, Via Paradisa 2, 56100 Pisa, Italy
| | - Michele Tonerini
- Department of Emergency Radiology, Pisa University-Hospital, Via Paradisa 2, 56100 Pisa, Italy
| | - Chiara Airoldi
- Department of Translational Medicine, University of Eastern Piemonte, 13100 Novara, Italy
| | - Dario Plataroti
- Department of Translational Research, Academic Radiology, University of Pisa, 56126 Pisa, Italy
| | | | - Annalisa De Liperi
- 2nd Radiology Unit, Department of Diagnostic Imaging, Pisa University-Hospital, Via Paradisa 2, 56100 Pisa, Italy
| | - Emanuele Neri
- Department of Translational Research, Academic Radiology, University of Pisa, 56126 Pisa, Italy
| | - Chiara Romei
- 2nd Radiology Unit, Department of Diagnostic Imaging, Pisa University-Hospital, Via Paradisa 2, 56100 Pisa, Italy
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12
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Tamal M, Althobaiti M, Alhashim M, Alsanea M, Hegazi TM, Deriche M, Alhashem AM. Radiomic features based automatic classification of CT lung findings for COVID-19 patients. Biomed Phys Eng Express 2024; 11:015012. [PMID: 39530647 DOI: 10.1088/2057-1976/ad9157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2024] [Accepted: 11/12/2024] [Indexed: 11/16/2024]
Abstract
Introduction. The lung CT images of COVID-19 patients can be typically characterized by three different findings- Ground Glass Opacity (GGO), consolidation and pleural effusion. GGOs have been shown to precede consolidations and has different heterogeneous appearance. Conventional severity scoring only uses total area of lung involvement ignoring appearance of the effected regions. This study proposes a baseline to select heterogeneity/radiomic features that can distinguish these three pathological lung findings.Methods. Four approaches were implemented to select features from a pool of 44 features. First one is a manual feature selection method. The rest are automatic feature selection methods based on Genetic Algorithm (GA) coupled with (1) K-Nearest-Neighbor (GA-KNN), (2) binary-decision-tree (GA-BDT) and (3) Artificial-Neural-Network (GA-ANN). For the purpose of validation, an ANN was trained using the selected features and tested on a completely independent data set.Results. Manual selection of nine radiomic features was found to provide the most accurate results with the highest sensitivity, specificity and accuracy (85.7% overall accuracy and 0.90 area under receiver operating characteristic curve) followed by GA-BDT, GA-KNN and GA-ANN (accuracy 78%, 77.5% and 76.8%).Conclusion. Manually selected nine radiomic features can be used in accurate severity scoring allowing the clinician to plan for more effective personalized treatment. They can also be useful for monitoring the progression of COVID-19 and response to therapy for clinical trials.
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Affiliation(s)
- Mahbubunnabi Tamal
- Department of Biomedical Engineering, College of Engineering, Imam Abdulrahman Bin Faisal University, Dammam 31441, Saudi Arabia
| | - Murad Althobaiti
- Department of Biomedical Engineering, College of Engineering, Imam Abdulrahman Bin Faisal University, Dammam 31441, Saudi Arabia
| | - Maryam Alhashim
- Department of medical physics, King Fahad Specialist Hospital Dammam, Dammam 32253, Saudi Arabia
- Department of Radiology, College of Medicine, Imam Abdulrahman Bin Faisal University, PO Box 1982, Dammam 31441, Saudi Arabia
| | - Maram Alsanea
- Department of medical physics, King Fahad Specialist Hospital Dammam, Dammam 32253, Saudi Arabia
| | - Tarek M Hegazi
- Department of Radiology, College of Medicine, Imam Abdulrahman Bin Faisal University, PO Box 1982, Dammam 31441, Saudi Arabia
| | - Mohamed Deriche
- Artificial Intelligence Research Centre, AIRC, Ajman University, United Arab Emirates
| | - Abdullah M Alhashem
- Neuroradiology Consultant, Radiology Department, Prince Sultan Military Medical City, Riyadh, Saudi Arabia
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13
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Chen Y, Lu W, Qin X, Wang J, Xie X. MetaFed: Federated Learning Among Federations With Cyclic Knowledge Distillation for Personalized Healthcare. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2024; 35:16671-16682. [PMID: 37506019 DOI: 10.1109/tnnls.2023.3297103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/30/2023]
Abstract
Federated learning (FL) has attracted increasing attention to building models without accessing raw user data, especially in healthcare. In real applications, different federations can seldom work together due to possible reasons such as data heterogeneity and distrust/inexistence of the central server. In this article, we propose a novel framework called MetaFed to facilitate trustworthy FL between different federations. MetaFed obtains a personalized model for each federation without a central server via the proposed cyclic knowledge distillation. Specifically, MetaFed treats each federation as a meta distribution and aggregates knowledge of each federation in a cyclic manner. The training is split into two parts: common knowledge accumulation and personalization. Comprehensive experiments on seven benchmarks demonstrate that MetaFed without a server achieves better accuracy compared with state-of-the-art methods [e.g., 10%+ accuracy improvement compared with the baseline for physical activity monitoring dataset (PAMAP2)] with fewer communication costs. More importantly, MetaFed shows remarkable performance in real-healthcare-related applications.
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14
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Le L, Narula N, Zhou F, Smereka P, Ordner J, Theise N, Moore WH, Girvin F, Azour L, Moreira AL, Naidich DP, Ko JP. Diseases Involving the Lung Peribronchovascular Region: A CT Imaging Pathologic Classification. Chest 2024; 166:802-820. [PMID: 38909953 DOI: 10.1016/j.chest.2024.05.033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 04/12/2024] [Accepted: 05/13/2024] [Indexed: 06/25/2024] Open
Abstract
TOPIC IMPORTANCE Chest CT imaging holds a major role in the diagnosis of lung diseases, many of which affect the peribronchovascular region. Identification and categorization of peribronchovascular abnormalities on CT imaging can assist in formulating a differential diagnosis and directing further diagnostic evaluation. REVIEW FINDINGS The peribronchovascular region of the lung encompasses the pulmonary arteries, airways, and lung interstitium. Understanding disease processes associated with structures of the peribronchovascular region and their appearances on CT imaging aids in prompt diagnosis. This article reviews current knowledge in anatomic and pathologic features of the lung interstitium composed of intercommunicating prelymphatic spaces, lymphatics, collagen bundles, lymph nodes, and bronchial arteries; diffuse lung diseases that present in a peribronchovascular distribution; and an approach to classifying diseases according to patterns of imaging presentations. Lung peribronchovascular diseases can appear on CT imaging as diffuse thickening, fibrosis, masses or masslike consolidation, ground-glass or air space consolidation, and cysts, acknowledging that some diseases may have multiple presentations. SUMMARY A category approach to peribronchovascular diseases on CT imaging can be integrated with clinical features as part of a multidisciplinary approach for disease diagnosis.
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Affiliation(s)
- Linda Le
- Department of Radiology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - Navneet Narula
- Department of Pathology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - Fang Zhou
- Department of Pathology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - Paul Smereka
- Department of Radiology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - Jeffrey Ordner
- Department of Pathology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - Neil Theise
- Department of Pathology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - William H Moore
- Department of Radiology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - Francis Girvin
- Department of Diagnostic Radiology, Weill Cornell Medicine, New York, NY
| | - Lea Azour
- Department of Radiology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY; Department of Radiological Sciences, UCLA David Geffen School of Medicine, Los Angeles, CA
| | - Andre L Moreira
- Department of Pathology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - David P Naidich
- Department of Radiology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY
| | - Jane P Ko
- Department of Radiology, NYU Langone Health; NYU Grossman School of Medicine, New York, NY.
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15
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Kulbun A, Tovichien P, Chaiyakulsil C, Satdhabudha A, Kamalaporn H, Sunkonkit K, Uppala R, Niyomkarn W, Norasettekul V, Ruangnapa K, Smathakanee C, Choursamran B, Jaroenying R, Sriboonyong T, Sitthikarnkha P, Roekworachai K, Ratanavongkosol T, Thongnual C, Deerojanawong J. Chest X-ray findings of COVID-19 pneumonia in children: Experiences in a multicenter study in Thailand. PLoS One 2024; 19:e0309110. [PMID: 39348359 PMCID: PMC11441654 DOI: 10.1371/journal.pone.0309110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Accepted: 08/06/2024] [Indexed: 10/02/2024] Open
Abstract
INTRODUCTION Although chest X-ray is commonly used to diagnose COVID-19 pneumonia, few studies have explored findings in pediatric patients. This study aimed to reveal chest X-ray characteristics in children with COVID-19 pneumonia and compare between non-severe and severe cases. METHODS This multicenter, nationwide retrospective study included all children aged 0 to 15 years who were admitted to 13 medical facilities throughout Thailand with COVID-19 pneumonia between January 2020 and October 2021. We analyzed the demographics, clinical features, and chest X-ray results of these children, and compared differences between the non-severe and severe groups. RESULTS During the study period, 1018 children (52% male, median age 5 years) were admitted with COVID-19 pneumonia. Most chest radiographic findings showed bilateral (51%) patchy/ground glass opacities (61%) in the central area (64%). Only 12% of the children exhibited typical classification for COVID-19 pneumonia, whereas 74% of chest radiographs were categorized as indeterminate. Comorbidities including chronic lung diseases [adjusted OR (95%CI): 14.56 (3.80-55.75), P-value <0.001], cardiovascular diseases [adjusted OR (95%CI): 7.54 (1.44-39.48), P-value 0.017], genetic diseases [adjusted OR (95%CI): 28.39 (4.55-177.23), P-value <0.001], clinical dyspnea [adjusted OR (95%CI): 12.13 (5.94-24.77), P-value <0.001], tachypnea [adjusted OR (95%CI): 3.92 (1.79-8.55), P-value 0.001], and bilateral chest X-ray infiltrations [adjusted OR (95%CI): 1.99 (1.05-3.78), P-value 0.036] were factors associated with severe COVID-19 pneumonia. CONCLUSION Most children with COVID-19 pneumonia had indeterminate chest X-rays according to the previous classification. We suggest using chest X-rays in conjunction with clinical presentation to screen high-risk patients for early detection of COVID-19 pneumonia.
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Affiliation(s)
- Aunya Kulbun
- Faculty of Medicine, Department of Pediatrics, Her Royal Highness Maha Chakri Sirindhorn Medical Center, Srinakharinwirot University, Nakhon Nayok, Thailand
| | - Prakarn Tovichien
- Faculty of Medicine Siriraj Hospital, Department of Pediatrics, Division of Pulmonology, Mahidol University, Bangkok, Thailand
| | - Chanapai Chaiyakulsil
- Faculty of Medicine, Department of Pediatrics, Thammasat University Hospital, Thammasat University, Pathumthani, Thailand
- Center of Excellence in Applied Epidemiology, Thammasat University, Pathumtani, Thailand
| | - Araya Satdhabudha
- Faculty of Medicine, Department of Pediatrics, Thammasat University Hospital, Thammasat University, Pathumthani, Thailand
| | - Harutai Kamalaporn
- Faculty of Medicine, Department of Pediatrics, Ramathibodi Hospital, Mahidol University, Bangkok, Thailand
| | - Kanokkarn Sunkonkit
- Faculty of Medicine, Department of Pediatrics, Chiang Mai University, Chiang Mai, Thailand
| | - Rattapon Uppala
- Faculty of Medicine, Department of Pediatrics, Khon Kaen University, Khon Kaen, Thailand
| | - Watit Niyomkarn
- Faculty of Medicine, Department of Pediatrics, Chulalongkorn University, Bangkok, Thailand
| | | | - Kanokpan Ruangnapa
- Faculty of Medicine, Department of Pediatrics, Prince of Songkla University, Songkhla, Thailand
| | | | | | - Rasintra Jaroenying
- Faculty of Medicine, Department of Pediatrics, Phramongkutklao Hospital, Bangkok, Thailand
| | - Tidarat Sriboonyong
- Faculty of Medicine, Department of Pediatrics, Ramathibodi Hospital, Mahidol University, Bangkok, Thailand
| | | | | | | | | | - Jitladda Deerojanawong
- Faculty of Medicine, Department of Pediatrics, Chulalongkorn University, Bangkok, Thailand
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16
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Lazova S, Gorelyova-Stefanova N, Slabakova Y, Tzotcheva I, Ilieva E, Miteva D, Velikova T. Complicated Pneumonia in a Child: Hydropneumothorax Associated with MIS-C and GAS Superinfection. Pediatr Rep 2024; 16:833-843. [PMID: 39449398 PMCID: PMC11503360 DOI: 10.3390/pediatric16040071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/20/2024] [Revised: 09/24/2024] [Accepted: 09/26/2024] [Indexed: 10/26/2024] Open
Abstract
A hydropneumothorax is an uncommon complication of pneumonia, particularly in pediatric patients, and typically arises secondary to conditions such as malignancies, esophageal-pleural fistula, thoracic trauma, or thoracocentesis. While pneumothorax is rarely reported in adults with COVID-19 and is even less common in children, isolated cases have been noted in those with Multisystem Inflammatory Syndrome in Children (MIS-C). A recent alert has also been issued about increased Group A Streptococcus (GAS) infections in Europe. Against this background, the primary aim of this case report is to describe a rare and severe complication of pneumonia in a previously healthy child with MIS-C and a positive throat culture for GAS.
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Affiliation(s)
- Snezhina Lazova
- Pediatric Clinic, University Hospital “N. I. Pirogov”, 21 “General Eduard I. Totleben” Blvd., 1606 Sofia, Bulgaria; (N.G.-S.); (I.T.)
- Department of Healthcare, Faculty of Public Health “Prof. Tsekomir Vodenicharov, MD, DSc”, Medical University of Sofia, Bialo more 8 Str., 1527 Sofia, Bulgaria
- Medical Faculty, Sofia University St. Kliment Ohridski, 1 Kozyak Str., 1407 Sofia, Bulgaria;
| | - Nadzhie Gorelyova-Stefanova
- Pediatric Clinic, University Hospital “N. I. Pirogov”, 21 “General Eduard I. Totleben” Blvd., 1606 Sofia, Bulgaria; (N.G.-S.); (I.T.)
| | - Yoanna Slabakova
- Specialized Hospital for Active Treatment of Infectious and Parasitic Diseases “Prof. Ivan Kirov”, Bulgaria Blvd. “Akademik Ivan Evstratiev Geshov” 17, 1431 Sofia, Bulgaria;
| | - Iren Tzotcheva
- Pediatric Clinic, University Hospital “N. I. Pirogov”, 21 “General Eduard I. Totleben” Blvd., 1606 Sofia, Bulgaria; (N.G.-S.); (I.T.)
| | - Elena Ilieva
- Department of Diagnostic Imaging, University Emergency Hospital (UMHATEM) “N. I. Pirogov”, Bul. “General Eduard I. Totleben” 21, 1606 Sofia, Bulgaria;
| | - Dimitrina Miteva
- Department of Genetics, Faculty of Biology, Sofia University St. Kliment Ohridski, 8 Dragan Tzankov Str., 1164 Sofia, Bulgaria;
| | - Tsvetelina Velikova
- Medical Faculty, Sofia University St. Kliment Ohridski, 1 Kozyak Str., 1407 Sofia, Bulgaria;
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17
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Villanueva BHA, Huang HY, Tyan YC, Lin PJ, Li CW, Minh H, Tayo LL, Chuang KP. Immune mRNA Expression and Fecal Microbiome Composition Change Induced by Djulis ( Chenopodium formosanum Koidz.) Supplementation in Aged Mice: A Pilot Study. MEDICINA (KAUNAS, LITHUANIA) 2024; 60:1545. [PMID: 39336586 PMCID: PMC11434560 DOI: 10.3390/medicina60091545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2024] [Revised: 09/14/2024] [Accepted: 09/19/2024] [Indexed: 09/30/2024]
Abstract
Background and Objectives: The aging process has always been associated with a higher susceptibility to chronic inflammatory lung diseases. Several studies have demonstrated the gut microbiome's influence on the lungs through cross-talk or the gut-lungs axis maintaining nutrient-rich microenvironments. Taiwan djulis (Chenopodium formosanum Koidz.) provides antioxidant and anti-inflammatory characteristics that could modulate the gut microbiome. This could induce the gut-lung axis through microbial cross-talk, thus favoring the modulation of lung inflammation. Materials and Methods: Here, we investigate the immune mRNA expression in the spleen, fecal microbiome composition, and hyperplasia of the bronchial epithelium in aged 2-year-old BALB/c mice after 60 days of supplementation of djulis. Results: The pro-inflammatory cytokines IFN-γ, TNF-α, and IL-1β, T; cells CD4 and CD8; and TLRs TLR3, TLR4, TLR5, TLR7, TLR8, and TLR9 were reduced in their mRNA expression levels, while the anti-inflammatory cytokines IL-2, IL-4, and IL-10 were highly expressed in the C. formosanum-treated group. Interestingly, the fecal microbiome composition analysis indicated higher diversity in the C. formosanum-treated group and the presence of butyrate-producing bacteria that are beneficial in the gut microbiome. The histopathology showed reduced hyperplasia of the bronchial epithelium based on the degree of lesions. Conclusions: Our findings suggest that Taiwan djulis can modulate the gut microbiome, leading to microbial cross-talk; reducing the mRNA expression of pro-inflammatory cytokines, T cells, and TLRs; and increasing anti-inflammatory cytokines in the spleen, as cytokines migrate in the lungs, preventing lung inflammation damage in aged mice or the gut-lung axis. Thus, Taiwan djulis could be considered a beneficial dietary component for the older adult population. The major limitation includes a lack of protein validation of cytokines and TLRs and quantification of the T cell population in the spleen as a marker of the gut-lung axis.
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Affiliation(s)
- Brian Harvey Avanceña Villanueva
- International Degree Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Pingtung 912, Taiwan
| | - Huai-Ying Huang
- International Degree Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Pingtung 912, Taiwan
- Demin Veterinary Hospital, Kaohsiung 811, Taiwan
- Department of Pet Care and Grooming, Ta Jen University, Pingtung 912, Taiwan
| | - Yu-Chang Tyan
- Department of Medical Imaging and Radiological Sciences, Kaohsiung Medical University, Kaohsiung 807, Taiwan
- Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung 807, Taiwan
- Center for Cancer Research, Kaohsiung Medical University, Kaohsiung 807, Taiwan
- Center for Tropical Medicine and Infectious Disease Research, Kaohsiung Medical University, Kaohsiung 807, Taiwan
| | - Pei-Ju Lin
- Livestock Disease Control Center of Chiayi County, Chiayi 612, Taiwan
- Department of Veterinary Medicine, National Chiayi University, Chiayi 600, Taiwan
| | | | - Hoang Minh
- Department of Anatomy and Histology, Faculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi 100000, Vietnam
| | - Lemmuel L Tayo
- School of Chemical, Biological, and Materials Engineering and Sciences, Mapúa University, Manila City 1002, Philippines
- School of Graduate Studies, Mapúa University, Manila City 1002, Philippines
- Department of Biology, School of Medicine and Health Sciences, Mapúa University, Makati City 1200, Philippines
| | - Kuo-Pin Chuang
- International Degree Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Pingtung 912, Taiwan
- Graduate Institute of Animal Vaccine Technology, College of Veterinary Medicine, National Pingtung University of Science and Technology, Pingtung 912, Taiwan
- School of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan
- School of Dentistry, Kaohsiung Medical University, Kaohsiung 807, Taiwan
- Companion Animal Research Center, National Pingtung University of Science and Technology, Pingtung 912, Taiwan
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18
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Piamonti D, Panza L, Flore R, Baccolini V, Pellegrino D, Sanna A, Lecci A, Lo Muzio G, Angelone D, Mirabelli FM, Morviducci M, Onorati P, Messina E, Panebianco V, Catalano C, Bonini M, Palange P. Ventilatory efficiency in long-term dyspnoeic patients following COVID-19 pneumonia. Respir Physiol Neurobiol 2024; 327:104285. [PMID: 38825094 DOI: 10.1016/j.resp.2024.104285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Revised: 05/20/2024] [Accepted: 05/29/2024] [Indexed: 06/04/2024]
Abstract
BACKGROUND Long COVID is defined as persistency of symptoms, such as exertional dyspnea, twelve weeks after recovery from SARS-CoV-2 infection. OBJECTIVES To investigate ventilatory efficiency by the use of cardiopulmonary exercise testing (CPET) in patients with exertional dyspnea despite normal basal spirometry after 18 (T18) and 36 months (T36) from COVID-19 pneumonia. METHODS One hundred patients with moderate-critical COVID-19 were prospectively enrolled in our Long COVID program. Medical history, physical examination and lung high-resolution computed tomography (HRCT) were obtained at hospitalization (T0), 3 (T3) and 15 months (T15). All HRCTs were revised using a semi-quantitative CT severity score (CSS). Pulmonary function tests were obtained at T3 and T15. CPET was performed in a subset of patients with residual dyspnea (mMRC ≥ 1), at T18 and at T36. RESULTS Remarkably, at CPET, ventilatory efficiency was reduced both at T18 (V'E/V'CO2 slope = 31.4±3.9 SD) and T36 (V'E/V'CO2 slope = 31.28±3.70 SD). Furthermore, we identified positive correlations between V'E/V'CO2 slope at T18 and T36 and both percentage of involvement and CSS at HRCT at T0, T3 and T15. Also, negative linear correlations were found between V'E/V'CO2 slope at T18 and T36 and DLCO at T3 and T15. CONCLUSIONS At eighteen months from COVID-19 pneumonia, 20 % of subjects still complains of exertional dyspnea. At CPET this may be explained by persistently reduced ventilatory efficiency, possibly related to the degree of lung parenchymal involvement in the acute phase of infection, likely reflecting a damage in the pulmonary circulation.
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Affiliation(s)
- Daniel Piamonti
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy.
| | - Luigi Panza
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Roberto Flore
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Valentina Baccolini
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Daniela Pellegrino
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Arianna Sanna
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Altea Lecci
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Giulia Lo Muzio
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Dario Angelone
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | | | - Matteo Morviducci
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Paolo Onorati
- Alghero City Hospital, Pulmonology and Respiratory Pathophysiology Service, Alghero, Italy
| | - Emanuele Messina
- Department of Radiological Sciences, Oncology and Pathology, Sapienza University of Rome, Italy
| | - Valeria Panebianco
- Department of Radiological Sciences, Oncology and Pathology, Sapienza University of Rome, Italy
| | - Carlo Catalano
- Department of Radiological Sciences, Oncology and Pathology, Sapienza University of Rome, Italy
| | - Matteo Bonini
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
| | - Paolo Palange
- Department of Public Health and Infectious Diseases, Sapienza University of Rome, Italy
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19
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Alshemaimri BK. Novel Deep CNNs Explore Regions, Boundaries, and Residual Learning for COVID-19 Infection Analysis in Lung CT. Tomography 2024; 10:1205-1221. [PMID: 39195726 PMCID: PMC11359787 DOI: 10.3390/tomography10080091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2024] [Revised: 07/06/2024] [Accepted: 07/17/2024] [Indexed: 08/29/2024] Open
Abstract
COVID-19 poses a global health crisis, necessitating precise diagnostic methods for timely containment. However, accurately delineating COVID-19-affected regions in lung CT scans is challenging due to contrast variations and significant texture diversity. In this regard, this study introduces a novel two-stage classification and segmentation CNN approach for COVID-19 lung radiological pattern analysis. A novel Residual-BRNet is developed to integrate boundary and regional operations with residual learning, capturing key COVID-19 radiological homogeneous regions, texture variations, and structural contrast patterns in the classification stage. Subsequently, infectious CT images undergo lesion segmentation using the newly proposed RESeg segmentation CNN in the second stage. The RESeg leverages both average and max-pooling implementations to simultaneously learn region homogeneity and boundary-related patterns. Furthermore, novel pixel attention (PA) blocks are integrated into RESeg to effectively address mildly COVID-19-infected regions. The evaluation of the proposed Residual-BRNet CNN in the classification stage demonstrates promising performance metrics, achieving an accuracy of 97.97%, F1-score of 98.01%, sensitivity of 98.42%, and MCC of 96.81%. Meanwhile, PA-RESeg in the segmentation phase achieves an optimal segmentation performance with an IoU score of 98.43% and a dice similarity score of 95.96% of the lesion region. The framework's effectiveness in detecting and segmenting COVID-19 lesions highlights its potential for clinical applications.
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Affiliation(s)
- Bader Khalid Alshemaimri
- Software Engineering Department, College of Computing and Information Sciences, King Saud University, Riyadh 11671, Saudi Arabia
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20
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Kumar S, Narayanasamy S, Nepal P, Kumar D, Wankhar B, Batchala P, Kaur N, Buddha S, Jose J, Ojili V. Imaging of pulmonary infections encountered in the emergency department in post-COVID 19 era- common, rare and exotic. Bacterial and viral. Emerg Radiol 2024; 31:543-550. [PMID: 38834862 DOI: 10.1007/s10140-024-02248-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Accepted: 05/23/2024] [Indexed: 06/06/2024]
Abstract
Pulmonary infections contribute substantially to emergency department (ED) visits, posing a considerable health burden. Lower respiratory tract infections are prevalent, particularly among the elderly, constituting a significant percentage of infectious disease-related ED visits. Timely recognition and treatment are crucial to mitigate morbidity and mortality. Imaging studies, primarily chest radiographs and less frequently CT chests, play a pivotal role in diagnosis. This article aims to elucidate the imaging patterns of both common and rare pulmonary infections (bacterial and viral) in the post COVID-19 era, emphasizing the importance of recognizing distinct radiological manifestations. The integration of clinical and microbiological evidence aids in achieving accurate diagnoses, and guiding optimal therapeutic interventions. Despite potential overlapping manifestations, a nuanced understanding of radiological patterns, coupled with comprehensive clinical and microbiological information, enhances diagnostic precision in majority cases.
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Affiliation(s)
- Shruti Kumar
- Department of Radiology, University of Arkansas for Medical Sciences, Little Rock, AR, USA
| | | | - Pankaj Nepal
- Department of Radiology, Inova Fairfax Hospital, Fairfax, VA, USA
| | - Devendra Kumar
- Department of Clinical imaging, Hamad Medical Corporation, Doha, Qatar
| | - Baphiralyne Wankhar
- Department of Radiology and Medical Imaging, UVA Health, Charlottesville, VA, USA
| | - Prem Batchala
- Department of Radiology and Medical Imaging, UVA Health, Charlottesville, VA, USA
| | - Neeraj Kaur
- Department of Radiology, Scarborough Health Network, Toronto, Canada
| | - Suryakala Buddha
- Department of Radiology, University of Arkansas for Medical Sciences, Little Rock, AR, USA
| | - Joe Jose
- Department of Radiology, University of Arkansas for Medical Sciences, Little Rock, AR, USA
| | - Vijayanadh Ojili
- Department of Radiology, University of Texas Health, San Antonio, TX, USA.
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21
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Griffin I, Kundalia R, Steinberg B, Prodigios J, Verma N, Hochhegger B, Mohammed TL. Evaluating Acute Pulmonary Changes of Coronavirus 2019: Comparative Analysis of the Pertinent Modalities. Semin Ultrasound CT MR 2024; 45:288-297. [PMID: 38428620 DOI: 10.1053/j.sult.2024.02.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/03/2024]
Abstract
This review explores imaging's crucial role in acute Coronavirus Disease 2019 (COVID-19) assessment. High Resolution Computer Tomography is especially effective in detection of lung abnormalities. Chest radiography has limited utility in the initial stages of COVID-19 infection. Lung Ultrasound has emerged as a valuable, radiation-free tool in critical care, and Magnetic Resonance Imaging shows promise as a Computed Tomography alternative. Typical and atypical findings of COVID-19 by each of these modalities are discussed with emphasis on their prognostic value. Considerations for pediatric and immunocompromised cases are outlined. A comprehensive diagnostic approach is recommended, as radiological diagnosis remains challenging in the acute phase.
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Affiliation(s)
- Ian Griffin
- College of Medicine, University of Florida, Gainesville, FL.
| | - Ronak Kundalia
- College of Medicine, University of Florida, Gainesville, FL
| | | | - Joice Prodigios
- Department of Radiology, University of Florida, Gainesville, FL
| | - Nupur Verma
- Department of Radiology, Baystate Medical Center, Springfield, MA
| | - Bruno Hochhegger
- College of Medicine, University of Florida, Gainesville, FL; Department of Radiology, University of Florida, Gainesville, FL
| | - Tan L Mohammed
- Department of Radiology, New York University, New York, NY
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22
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Agarwal S, Saxena S, Carriero A, Chabert GL, Ravindran G, Paul S, Laird JR, Garg D, Fatemi M, Mohanty L, Dubey AK, Singh R, Fouda MM, Singh N, Naidu S, Viskovic K, Kukuljan M, Kalra MK, Saba L, Suri JS. COVLIAS 3.0: cloud-based quantized hybrid UNet3+ deep learning for COVID-19 lesion detection in lung computed tomography. Front Artif Intell 2024; 7:1304483. [PMID: 39006802 PMCID: PMC11240867 DOI: 10.3389/frai.2024.1304483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Accepted: 06/10/2024] [Indexed: 07/16/2024] Open
Abstract
Background and novelty When RT-PCR is ineffective in early diagnosis and understanding of COVID-19 severity, Computed Tomography (CT) scans are needed for COVID diagnosis, especially in patients having high ground-glass opacities, consolidations, and crazy paving. Radiologists find the manual method for lesion detection in CT very challenging and tedious. Previously solo deep learning (SDL) was tried but they had low to moderate-level performance. This study presents two new cloud-based quantized deep learning UNet3+ hybrid (HDL) models, which incorporated full-scale skip connections to enhance and improve the detections. Methodology Annotations from expert radiologists were used to train one SDL (UNet3+), and two HDL models, namely, VGG-UNet3+ and ResNet-UNet3+. For accuracy, 5-fold cross-validation protocols, training on 3,500 CT scans, and testing on unseen 500 CT scans were adopted in the cloud framework. Two kinds of loss functions were used: Dice Similarity (DS) and binary cross-entropy (BCE). Performance was evaluated using (i) Area error, (ii) DS, (iii) Jaccard Index, (iii) Bland-Altman, and (iv) Correlation plots. Results Among the two HDL models, ResNet-UNet3+ was superior to UNet3+ by 17 and 10% for Dice and BCE loss. The models were further compressed using quantization showing a percentage size reduction of 66.76, 36.64, and 46.23%, respectively, for UNet3+, VGG-UNet3+, and ResNet-UNet3+. Its stability and reliability were proved by statistical tests such as the Mann-Whitney, Paired t-Test, Wilcoxon test, and Friedman test all of which had a p < 0.001. Conclusion Full-scale skip connections of UNet3+ with VGG and ResNet in HDL framework proved the hypothesis showing powerful results improving the detection accuracy of COVID-19.
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Affiliation(s)
- Sushant Agarwal
- Advanced Knowledge Engineering Center, GBTI, Roseville, CA, United States
- Department of CSE, PSIT, Kanpur, India
| | | | - Alessandro Carriero
- Department of Radiology, “Maggiore della Carità” Hospital, University of Piemonte Orientale (UPO), Novara, Italy
| | | | - Gobinath Ravindran
- Department of Civil Engineering, SR University, Warangal, Telangana, India
| | - Sudip Paul
- Department of Biomedical Engineering, NEHU, Shillong, India
| | - John R. Laird
- Heart and Vascular Institute, Adventist Health St. Helena, St. Helena, CA, United States
| | - Deepak Garg
- School of CS and AI, SR University, Warangal, Telangana, India
| | - Mostafa Fatemi
- Department of Physiology and Biomedical Engineering, Mayo Clinic College of Medicine and Science, Rochester, MN, United States
| | - Lopamudra Mohanty
- Department of Computer Science, ABES Engineering College, Ghaziabad, UP, India
- Department of Computer science, Bennett University, Greater Noida, UP, India
| | - Arun K. Dubey
- Bharati Vidyapeeth’s College of Engineering, New Delhi, India
| | - Rajesh Singh
- Division of Research and Innovation, Uttaranchal Institute of Technology, Uttaranchal University, Dehradun, India
| | - Mostafa M. Fouda
- Department of ECE, Idaho State University, Pocatello, ID, United States
| | - Narpinder Singh
- Department of Food Science and Technology, Graphic Era Deemed to be University, Dehradun, India
| | - Subbaram Naidu
- Department of EE, University of Minnesota, Duluth, MN, United States
| | | | - Melita Kukuljan
- Department of Interventional and Diagnostic Radiology, Clinical Hospital Center Rijeka, Rijeka, Croatia
| | - Manudeep K. Kalra
- Department of Radiology, Massachusetts General Hospital, Boston, MA, United States
| | - Luca Saba
- Department of Radiology, A.O.U., Cagliari, Italy
| | - Jasjit S. Suri
- Department of ECE, Idaho State University, Pocatello, ID, United States
- Department of Computer Science, Graphic Era Deemed to Be University, Dehradun, Uttarakhand, India
- Symbiosis Institute of Technology, Nagpur Campus, Symbiosis International (Deemed University), Pune, India
- Stroke and Monitoring Division, AtheroPoint LLC, Roseville, CA, United States
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23
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Al-Momani H. A Literature Review on the Relative Diagnostic Accuracy of Chest CT Scans versus RT-PCR Testing for COVID-19 Diagnosis. Tomography 2024; 10:935-948. [PMID: 38921948 PMCID: PMC11209112 DOI: 10.3390/tomography10060071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2024] [Revised: 06/09/2024] [Accepted: 06/11/2024] [Indexed: 06/27/2024] Open
Abstract
BACKGROUND Reverse transcription polymerase chain reaction (RT-PCR) is the main technique used to identify COVID-19 from respiratory samples. It has been suggested in several articles that chest CTs could offer a possible alternate diagnostic tool for COVID-19; however, no professional medical body recommends using chest CTs as an early COVID-19 detection modality. This literature review examines the use of CT scans as a diagnostic tool for COVID-19. METHOD A comprehensive search of research works published in peer-reviewed journals was carried out utilizing precisely stated criteria. The search was limited to English-language publications, and studies of COVID-19-positive patients diagnosed using both chest CT scans and RT-PCR tests were sought. For this review, four databases were consulted: these were the Cochrane and ScienceDirect catalogs, and the CINAHL and Medline databases made available by EBSCOhost. FINDINGS In total, 285 possibly pertinent studies were found during an initial search. After applying inclusion and exclusion criteria, six studies remained for analysis. According to the included studies, chest CT scans were shown to have a 44 to 98% sensitivity and 25 to 96% specificity in terms of COVID-19 diagnosis. However, methodological limitations were identified in all studies included in this review. CONCLUSION RT-PCR is still the suggested first-line diagnostic technique for COVID-19; while chest CT is adequate for use in symptomatic patients, it is not a sufficiently robust diagnostic tool for the primary screening of COVID-19.
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Affiliation(s)
- Hafez Al-Momani
- Department of Microbiology, Pathology and Forensic Medicine, Faculty of Medicine, The Hashemite University, Zarqa 1133, Jordan
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24
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Hermawati FA, Trilaksono BR, Nugroho AS, Imah EM, Lukas, Kamelia T, Mengko TL, Handayani A, Sugijono SE, Zulkarnaien B, Afifi R, Kusumawardhana DB. Detection method of viral pneumonia imaging features based on CT scan images in COVID-19 case study. MethodsX 2024; 12:102507. [PMID: 38204979 PMCID: PMC10776984 DOI: 10.1016/j.mex.2023.102507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 11/30/2023] [Indexed: 01/12/2024] Open
Abstract
This study aims to automatically analyze and extract abnormalities in the lung field due to Coronavirus Disease 2019 (COVID-19). Types of abnormalities that can be detected are Ground Glass Opacity (GGO) and consolidation. The proposed method can also identify the location of the abnormality in the lung field, that is, the central and peripheral lung area. The location and type of these abnormalities affect the severity and confidence level of a patient suffering from COVID-19. The detection results using the proposed method are compared with the results of manual detection by radiologists. From the experimental results, the proposed system can provide an average error of 0.059 for the severity score and 0.069 for the confidence level. This method has been implemented in a web-based application for general users.•A method to detect the appearance of viral pneumonia imaging features, namely Ground Glass Opacity (GGO) and consolidation on the chest Computed Tomography (CT) scan images.•This method can separate the lung field to the right lung and the left lung, and it also can identify the detected imaging feature's location in the central or peripheral of the lung field.•Severity level and confidence level of the patient's suffering are measured.
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Affiliation(s)
| | | | | | - Elly Matul Imah
- Data Science Department, Universitas Negeri Surabaya, Indonesia
| | - Lukas
- Electrial Engineering Department, Universitas Katolik Indonesia Atma Jaya, Jakarta, Indonesia
| | - Telly Kamelia
- Department of Internal Medicine, Dr. Cipto Mangunkusumo National Central Public Hospital, Jakarta, Indonesia
| | - Tati L.E.R. Mengko
- School of Electrical Engineering and Informatics, Institut Teknologi Bandung, Bandung, Indonesia
| | - Astri Handayani
- School of Electrical Engineering and Informatics, Institut Teknologi Bandung, Bandung, Indonesia
| | | | - Benny Zulkarnaien
- Department of Radiology, Dr. Cipto Mangunkusumo National Central Public Hospital, Jakarta, Indonesia
| | - Rahmi Afifi
- Department of Radiology, Dr. Cipto Mangunkusumo National Central Public Hospital, Jakarta, Indonesia
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25
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Lahmouch N, Britel D, Mouine N, Asfalou I, Lakhal Z, Benyass A. Rare case of cardiac angiosarcoma and alveolar hemorrhage in an adolescent patient initially suspected COVID19 infection: A case report and literature review. Radiol Case Rep 2024; 19:1722-1728. [PMID: 38384711 PMCID: PMC10877114 DOI: 10.1016/j.radcr.2024.01.045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Revised: 01/11/2024] [Accepted: 01/18/2024] [Indexed: 02/23/2024] Open
Abstract
Primary cardiac tumors are a rarity, and sarcomas emerge as the prevailing form of primary malignant cardiac tumors across age groups, encompassing both children and adults. Within this category, angiosarcoma stands out, constituting around 31% of all primary malignant cardiac tumors. Primary cardiac angiosarcoma displays a notably aggressive nature, characterized by early systemic metastasis, and is accompanied by a generally unfavorable prognosis. We describe a case concerning a previously healthy teenage girl who displayed persistent constitutional symptoms and hemoptysis for 15 days. Subsequent investigation uncovered alveolar hemorrhage, ultimately linked to a cardiac angiosarcoma. The difficulty in this instance arose from the vague nature of the initial symptoms, posing a challenge to promptly and accurately diagnose the condition. This case highlights the aggressive nature of primary cardiac angiosarcoma. The vague initial symptoms underscore the need for early detection and optimized treatment to improve the generally unfavorable prognosis associated with this condition. Increased awareness and a multidisciplinary approach are crucial in addressing the diagnostic and therapeutic challenges posed by primary cardiac angiosarcoma.
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Affiliation(s)
- Nouhaila Lahmouch
- Department of Cardiology, Mohammed V University, Faculty of Medicine and Pharmacy in Rabat Morocco, Mohammed V Military Hospital, Morocco
| | - Driss Britel
- Department of Cardiology, Mohammed V University, Faculty of Medicine and Pharmacy in Rabat Morocco, Mohammed V Military Hospital, Morocco
| | - Najat Mouine
- Department of Cardiology, Mohammed V University, Faculty of Medicine and Pharmacy in Rabat Morocco, Mohammed V Military Hospital, Morocco
| | - Ilyasse Asfalou
- Department of Cardiology, Mohammed V University, Faculty of Medicine and Pharmacy in Rabat Morocco, Mohammed V Military Hospital, Morocco
| | - Zouhair Lakhal
- Department of Cardiology, Mohammed V University, Faculty of Medicine and Pharmacy in Rabat Morocco, Mohammed V Military Hospital, Morocco
| | - Aatif Benyass
- Department of Cardiology, Mohammed V University, Faculty of Medicine and Pharmacy in Rabat Morocco, Mohammed V Military Hospital, Morocco
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Beck KS, Yoon JH, Yoon SH. Radiologic Abnormalities in Prolonged SARS-CoV-2 Infection: A Systematic Review. Korean J Radiol 2024; 25:473-480. [PMID: 38685737 PMCID: PMC11058427 DOI: 10.3348/kjr.2023.1149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 02/06/2024] [Accepted: 02/24/2024] [Indexed: 05/02/2024] Open
Abstract
We systematically reviewed radiological abnormalities in patients with prolonged SARS-CoV-2 infection, defined as persistently positive polymerase chain reaction (PCR) results for SARS-CoV-2 for > 21 days, with either persistent or relapsed symptoms. We extracted data from 24 patients (median age, 54.5 [interquartile range, 44-64 years]) reported in the literature and analyzed their representative CT images based on the timing of the CT scan relative to the initial PCR positivity. Our analysis focused on the patterns and distribution of CT findings, severity scores of lung involvement on a scale of 0-4, and the presence of migration. All patients were immunocompromised, including 62.5% (15/24) with underlying lymphoma and 83.3% (20/24) who had received anti-CD20 therapy within one year. Median duration of infection was 90 days. Most patients exhibited typical CT appearance of coronavirus disease 19 (COVID-19), including ground-glass opacities with or without consolidation, throughout the follow-up period. Notably, CT severity scores were significantly lower during ≤ 21 days than during > 21 days (P < 0.001). Migration was observed on CT in 22.7% (5/22) of patients at ≤ 21 days and in 68.2% (15/22) to 87.5% (14/16) of patients at > 21 days, with rare instances of parenchymal bands in previously affected areas. Prolonged SARS-CoV-2 infection usually presents as migrating typical COVID-19 pneumonia in immunocompromised patients, especially those with impaired B-cell immunity.
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Affiliation(s)
- Kyongmin Sarah Beck
- Department of Radiology, Seoul St. Mary's Hospital, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea
| | - Jeong-Hwa Yoon
- Institute of Health Policy and Management, Medical Research Center, Seoul National University, Seoul, Republic of Korea
| | - Soon Ho Yoon
- Department of Radiology, Seoul National University Hospital, Seoul National College of Medicine, Seoul, Republic of Korea.
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Golino G, Forin E, Boni E, Martin M, Perbellini G, Rizzello V, Toniolo A, Danzi V. Secondary pneumomediastinum in COVID-19 patient: A case managed with VV-ECMO. IDCases 2024; 36:e01956. [PMID: 38681081 PMCID: PMC11047182 DOI: 10.1016/j.idcr.2024.e01956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 03/10/2024] [Accepted: 04/14/2024] [Indexed: 05/01/2024] Open
Abstract
Air leak syndrome, including pneumomediastinum (PM), pneumopericardium, pneumothorax, or subcutaneous emphysema, is primarily caused by chest trauma, cardiothoracic surgery, esophageal perforation, and mechanical ventilation. Secondary pneumomediastinum (SP) is a rare complication, with a much lower incidence reported in patients with coronavirus disease 2019 (COVID-19). Our patient was a 44-year-old nonsmoker male with a previous history of obesity (Body Mass Index [BMI] 35 kg/m2), hyperthyroidism, hypokinetic cardiopathy and atrial fibrillation in treatment with flecainide, who presented to the emergency department with 6 days of fever, cough, dyspnea, and respiratory distress. The COVID-19 diagnosis was confirmed based on a polymerase chain reaction (PCR) test for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). After initiation of mechanical ventilation, a chest computed tomography (CT) on the first day revealed bilateral multifocal ground-glass opacities, consolidation and an extensive SP and pneumoperitoneum. Our therapeutic strategy was initiation of veno-venous extracorporeal membrane oxygenation (VV-ECMO) as a bridge to recovery after positioning 2 drains (mediastinal and pleural), for both oxygenation and carbon dioxide clearance, to allow protective and ultra-protective ventilation to limit ventilator-induced lung injury (VILI) and the intensity of mechanical power for lung recovery. After another chest CT scan which showed a clear reduction of the PM, 2 pronation and neuromuscular relaxation cycles were also required, with improvement of gas exchange and respiratory mechanics. On the 15th day, lung function recovered and the patient was then weaned from VV-ECMO, and ultimately made a good recovery and was discharged. In conclusion, SP may be a reflection of extensive alveolar damage and should be considered as a potential predictive factor for adverse outcome in critically ill SARS-CoV2 patients.
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Affiliation(s)
- Gianlorenzo Golino
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
| | - Edoardo Forin
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
| | - Elisa Boni
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
| | - Marina Martin
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
| | - Guido Perbellini
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
| | - Veronica Rizzello
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
| | - Anna Toniolo
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
| | - Vinicio Danzi
- Ospedale San Bortolo, Vicenza, Italy
- Department of Anesthesia and Intensive Care, Vicenza 36100, Italy
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La Distia Nora R, Zahra SS, Riasanti M, Fatimah A, Ningtias RD, Ibrahim F, Bela B, Handayani RD, Yasmon A, Susiyanti M, Edwar L, Aziza Y, Sitompul R. Dry eye symptoms are prevalent in moderate-severe COVID-19, while SARS-COV-2 presence is higher in mild COVID-19: Possible ocular transmission risk of COVID-19. Heliyon 2024; 10:e28649. [PMID: 38586378 PMCID: PMC10998079 DOI: 10.1016/j.heliyon.2024.e28649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2023] [Revised: 03/17/2024] [Accepted: 03/21/2024] [Indexed: 04/09/2024] Open
Abstract
Purpose To evaluate the correlation between dry eye symptoms and coronavirus disease 2019 (COVID-19) infection and to assess the real-time reverse transcription-polymerase chain reaction (RT‒PCR) of severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) from the conjunctival swab. Methods A prospective observational case series study was conducted of all suspected and confirmed COVID-19 patients from Dr. Cipto Mangunkusumo Hospital (RSCM) and the Universitas Indonesia Hospital (RSUI). On the first day of the visit (day 0), systemic clinical symptoms and naso-oropharyngeal (NO) RT‒PCR results will classify all subjects as non-, suspected, or confirmed (mild, moderate, and severe) COVID-19. In all patients, we determined the dry eye symptoms based on the Ocular Surface Disease Index (OSDI) and followed up 7(day 7) and 14 days (day 14) after the first visit. When it was technically possible, we also examined the objective dry eye measurements: tear meniscus height (TMH), noninvasive Keratograph® break-up time (NIKBUT), and ocular redness. Additionally, we took conjunctival swab samples for SARS-CoV-2 RT-PCR in all patients. Results The OSDI scores for 157 patients decreased across days 0, 7, and 14 (median (interquartile range): 2.3 (0-8), 0 (0-3), and 0 (0-0), p value < 0.0001 (D0 vs D14). The moderate-severe COVID-19 group had a higher OSDI score than the other groups at median D0 (15.6 vs 0-2.3), p value < 0.0001 and this pattern was consistently seen at follow-up D7 and D14. However, dry eye complaints were not correlated with the three objective dry eye measurements in mild-moderate COVID-19 patients. NO RT‒PCR results were positive in 32 (20.4%) patients, namely, 13 and 19 moderate-severe and mild COVID-19 patients, respectively. Positive RT‒PCR results were observed in 7/157 (4.5%) conjunctival swab samples from 1 in non-COVID-19 group and 6 in mild group. Conclusion In the early phase of infection, COVID-19 patients experience dry eye symptoms, which have no correlation with objective dry eye measurements. SARS-CoV-2 in conjunctival swab samples can be detected in patients with normal-to-mild COVID-19, which shows the risk of ocular transmission.
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Affiliation(s)
- Rina La Distia Nora
- Department of Ophthalmology, Faculty of Medicine, Universitas Indonesia – Cipto Mangunkusumo Kirana Eye Hospital, Jakarta, Indonesia
- Universitas Indonesia Hospital (RSUI), Depok, West Java, Indonesia
- Wisma Atlet COVID-19 Emergency Hospital, North Jakarta, Jakarta, Indonesia
| | | | - Mei Riasanti
- Department of Ophthalmology, Faculty of Medicine, Universitas Indonesia – Cipto Mangunkusumo Kirana Eye Hospital, Jakarta, Indonesia
| | - Aliya Fatimah
- Wisma Atlet COVID-19 Emergency Hospital, North Jakarta, Jakarta, Indonesia
| | - Rani Dwi Ningtias
- Wisma Atlet COVID-19 Emergency Hospital, North Jakarta, Jakarta, Indonesia
| | - Fera Ibrahim
- Universitas Indonesia Hospital (RSUI), Depok, West Java, Indonesia
- Department of Microbiology, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia – Cipto Mangunkusumo, Jakarta, Indonesia
| | - Budiman Bela
- Universitas Indonesia Hospital (RSUI), Depok, West Java, Indonesia
- Department of Microbiology, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia – Cipto Mangunkusumo, Jakarta, Indonesia
| | - R.R. Diah Handayani
- Universitas Indonesia Hospital (RSUI), Depok, West Java, Indonesia
- Department of Pulmonology and Respiratory Medicine, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia - Persahabatan Hospital, Jakarta, Indonesia
| | - Andi Yasmon
- Department of Microbiology, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia – Cipto Mangunkusumo, Jakarta, Indonesia
| | - Made Susiyanti
- Department of Ophthalmology, Faculty of Medicine, Universitas Indonesia – Cipto Mangunkusumo Kirana Eye Hospital, Jakarta, Indonesia
| | - Lukman Edwar
- Department of Ophthalmology, Faculty of Medicine, Universitas Indonesia – Cipto Mangunkusumo Kirana Eye Hospital, Jakarta, Indonesia
| | - Yulia Aziza
- Department of Ophthalmology, Faculty of Medicine, Universitas Indonesia – Cipto Mangunkusumo Kirana Eye Hospital, Jakarta, Indonesia
| | - Ratna Sitompul
- Department of Ophthalmology, Faculty of Medicine, Universitas Indonesia – Cipto Mangunkusumo Kirana Eye Hospital, Jakarta, Indonesia
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Surov A, Meyer HJ, Ehrengut C, Zimmermann S, Schramm D, Hinnerichs M, Bär C, Borggrefe J. Myosteatosis predicts short-term mortality in patients with COVID-19: A multicenter analysis. Nutrition 2024; 120:112327. [PMID: 38341908 DOI: 10.1016/j.nut.2023.112327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 10/29/2023] [Accepted: 12/06/2023] [Indexed: 02/13/2024]
Abstract
OBJECTIVES Body composition on computed tomography can predict prognosis in patients with COVID-19. The reported data are based on small retrospective studies. The aim of the present study was to analyze the prognostic relevance of skeletal muscle parameter derived from chest computed tomography for prediction of 30-d mortality in patients with COVID-19 in a multicenter setting. METHODS The clinical databases of three centers were screened for patients with COVID-19 between 2020 and 2022. Overall, 447 patients (142 female; 31.7%) were included into the study. The mean age at the time of computed tomography acquisition was 63.8 ± 14.7 y and median age was 65 y. Skeletal muscle area and skeletal muscle density were defined on level T12 of the chest. RESULTS Overall, 118 patients (26.3%) died within the 30-d observation period. Of the patient sample, 255 patients (57.0%) were admitted to an intensive care unit and 122 patients needed mechanical ventilation (27.3%). The mean skeletal muscle area of all patients was 96.1 ± 27.2 cm² (range = 23.2-200.7 cm²). For skeletal muscle density, the mean was 24.3 ± 11.1 Hounsfield units (range = -5.6 to 55.8 Hounsfield units). In survivors, the mean skeletal muscle density was higher compared with the lethal cases (mean 25.8 ± 11.2 versus 20.1 ± 9.6; P < 0.0001). Presence of myosteatosis was independently associated with 30-d mortality: odds ratio = 2.72 (95% CI, 1.71-4.32); P = 0.0001. CONCLUSIONS Myosteatosis is strongly associated with 30-d mortality in patients COVID-19. Patients with COVID-19 with myosteatosis should be considered a risk group.
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Affiliation(s)
- Alexey Surov
- Department of Radiology, Neuroradiology and Nuclear Medicine, Johannes Wesling Medical Center, Ruhr University Bochum, Germany.
| | - Hans Jonas Meyer
- Department of Diagnostic and Interventional Radiology, University of Leipzig, Leipzig, Germany
| | - Constantin Ehrengut
- Department of Diagnostic and Interventional Radiology, University of Leipzig, Leipzig, Germany
| | - Silke Zimmermann
- Department of Laboratory Medicine, University of Leipzig, Leipzig, Germany
| | - Dominik Schramm
- Department of Diagnostic and Interventional Radiology, University of Halle-Wittenberg, Halle (Saale), Germany
| | - Mattes Hinnerichs
- Department of Radiology and Nuclear Medicine, Otto von Guericke University, Magdeburg, Germany
| | - Caroline Bär
- Department of Radiology and Nuclear Medicine, Otto von Guericke University, Magdeburg, Germany
| | - Jan Borggrefe
- Department of Radiology, Neuroradiology and Nuclear Medicine, Johannes Wesling Medical Center, Ruhr University Bochum, Germany
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Wills NK, Adriaanse M, Erasmus S, Wasserman S. Chest X-ray Features of HIV-Associated Pneumocystis Pneumonia (PCP) in Adults: A Systematic Review and Meta-analysis. Open Forum Infect Dis 2024; 11:ofae146. [PMID: 38628951 PMCID: PMC11020241 DOI: 10.1093/ofid/ofae146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Accepted: 03/14/2024] [Indexed: 04/19/2024] Open
Abstract
Background The performance of chest x-ray (CXR) features for Pneumocystis pneumonia (PCP) diagnosis has been evaluated in small studies. We conducted a systematic review and meta-analysis to describe CXR changes in adults with HIV-associated laboratory-confirmed PCP, comparing these with non-PCP respiratory disease. Methods We searched databases for studies reporting CXR changes in people >15 years old with HIV and laboratory-confirmed PCP and those with non-PCP respiratory disease. CXR features were grouped using consensus terms. Proportions were pooled and odds ratios (ORs) generated using random-effects meta-analysis, with subgroup analyses by CD4 count, study period, radiology review method, and study region. Results Fifty-one studies (with 1821 PCP and 1052 non-PCP cases) were included. Interstitial infiltrate (59%; 95% CI, 52%-66%; 36 studies, n = 1380; I2 = 85%) and ground-glass opacification (48%; 95% CI, 15%-83%; 4 studies, n = 57; I2 = 86%) were common in PCP. Cystic lesions, central lymphadenopathy, and pneumothorax were infrequent. Pleural effusion was rare in PCP (0%; 95% CI, 0%-2%). Interstitial infiltrate (OR, 2.3; 95% CI, 1.4-3.9; I2 = 60%), interstitial-alveolar infiltrate (OR, 10.2; 95% CI, 3.2-32.4; I2 = 0%), and diffuse CXR changes (OR, 7.3; 95% CI, 2.7-20.2; I2 = 87%) were associated with PCP diagnosis. There was loss of association with alveolar infiltrate in African studies. Conclusions Diffuse CXR changes and interstitial-alveolar infiltrates indicate a higher likelihood of PCP. Pleural effusion, lymphadenopathy, and focal alveolar infiltrates suggest alternative causes. These findings could be incorporated into clinical algorithms to improve diagnosis of HIV-associated PCP.
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Affiliation(s)
- Nicola K Wills
- Department of Medicine, University of Cape Town, Cape Town, South Africa
| | | | | | - Sean Wasserman
- Infection and Immunity Research Institute, St George's University of London, London, UK
- Centre for Infectious Diseases Research in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa
- MRC Centre for Medical Mycology, Faculty of Health and Life Sciences, University of Exeter, Exeter, UK
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Trinh CD, Le VN, Le VNB, Pham NT, Le VD. Lung abnormalities on computed tomography of Vietnamese patients with COVID-19 and the association with medical variables. IJID REGIONS 2024; 10:183-190. [PMID: 38351902 PMCID: PMC10862005 DOI: 10.1016/j.ijregi.2024.01.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 01/14/2024] [Accepted: 01/15/2024] [Indexed: 02/16/2024]
Abstract
Objectives Patients with COVID-19 may experience a lung injury without presenting clinical symptoms. Early detection of lung injury in patients with COVID-19 is required to enhance prediction and prevent severe progression. Methods Lung lesions in patients with COVID-19 were defined using the Fleischner Society terminology. Chest computed tomography lesions and their correlation with demographic characteristics and medical variables were identified. Results Patients with mild and moderate COVID-19 had up to 45% lung injuries, whereas critical patients had 55%. However, patients with mild and moderate COVID-19 typically had low-level lung injuries. Ground-glass (68.1%), consolidation (48.8%), opacity (36.3%), and nodular (6.9%) lung lesions were the most prevalent in patients with COVID-19. Patients with COVID-19 infected with the Delta variant had worse lung injury than those infected with the Alpha and Omicron. People vaccinated with ≥2 doses showed a lower risk of lung injury than those vaccinated with <1 dose. Patients <18 years old were less likely to have a lung injury than patients >18 years old. The treatment outcomes were unaffected by the severity of the lung injury. Conclusion Patients with mild COVID-19 had a similar risk of lung injury as patients with severe COVID-19. Thus, using chest computed tomography to detect lung injury can enhance the treatment outcomes and reduce the patient's risk of pulmonary complications.
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Affiliation(s)
- Cong Dien Trinh
- Departments of Infectious Disease, Military Hospital 103, Hanoi, Vietnam
| | - Van Nam Le
- Departments of Infectious Disease, Military Hospital 103, Hanoi, Vietnam
| | | | - Ngoc Thach Pham
- Micobiology and Molecular Biology Department, National Hospital for Tropical Diseases, Hanoi, Vietnam
| | - Van Duyet Le
- Micobiology and Molecular Biology Department, National Hospital for Tropical Diseases, Hanoi, Vietnam
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Santos I, Silva M, Grácio M, Pedroso L, Lima A. Milk Antiviral Proteins and Derived Peptides against Zoonoses. Int J Mol Sci 2024; 25:1842. [PMID: 38339120 PMCID: PMC10855762 DOI: 10.3390/ijms25031842] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 01/29/2024] [Accepted: 01/31/2024] [Indexed: 02/12/2024] Open
Abstract
Milk is renowned for its nutritional richness but also serves as a remarkable reservoir of bioactive compounds, particularly milk proteins and their derived peptides. Recent studies have showcased several robust antiviral activities of these proteins, evidencing promising potential within zoonotic viral diseases. While several publications focus on milk's bioactivities, antiviral peptides remain largely neglected in reviews. This knowledge is critical for identifying novel research directions and analyzing potential nutraceuticals within the One Health context. Our review aims to gather the existing scientific information on milk-derived antiviral proteins and peptides against several zoonotic viral diseases, and their possible mechanisms. Overall, in-depth research has increasingly revealed them as a promising and novel strategy against viruses, principally for those constituting a plausible pandemic threat. The underlying mechanisms of the bioactivity of milk's proteins include inhibiting viral entry and attachment to the host cells, blocking replication, or even viral inactivation via peptide-membrane interactions. Their marked versatility and effectiveness stand out compared to other antiviral peptides and can support future research and development in the post-COVID-19 era. Overall, our review helps to emphasize the importance of potentially effective milk-derived peptides, and their significance for veterinary and human medicines, along with the pharmaceutical, nutraceutical, and dairy industry.
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Affiliation(s)
- Isabel Santos
- Faculty of Veterinary Medicine, Lusófona University, 376 Campo Grande, 1749-024 Lisbon, Portugal; (M.S.); (L.P.)
- CECAV—Centro de Ciência Animal e Veterinária, Faculty of Veterinary Medicine, Lusófona University, 1749-024 Lisbon, Portugal
| | - Mariana Silva
- Faculty of Veterinary Medicine, Lusófona University, 376 Campo Grande, 1749-024 Lisbon, Portugal; (M.S.); (L.P.)
| | - Madalena Grácio
- Instituto Superior de Agronomia, Universidade de Lisboa, Tapada da Ajuda, 1349-017 Lisbon, Portugal;
| | - Laurentina Pedroso
- Faculty of Veterinary Medicine, Lusófona University, 376 Campo Grande, 1749-024 Lisbon, Portugal; (M.S.); (L.P.)
- CECAV—Centro de Ciência Animal e Veterinária, Faculty of Veterinary Medicine, Lusófona University, 1749-024 Lisbon, Portugal
| | - Ana Lima
- Faculty of Veterinary Medicine, Lusófona University, 376 Campo Grande, 1749-024 Lisbon, Portugal; (M.S.); (L.P.)
- CECAV—Centro de Ciência Animal e Veterinária, Faculty of Veterinary Medicine, Lusófona University, 1749-024 Lisbon, Portugal
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Khan U, Afrakhteh S, Mento F, Mert G, Smargiassi A, Inchingolo R, Tursi F, Macioce VN, Perrone T, Iacca G, Demi L. Low-complexity lung ultrasound video scoring by means of intensity projection-based video compression. Comput Biol Med 2024; 169:107885. [PMID: 38141447 DOI: 10.1016/j.compbiomed.2023.107885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 11/27/2023] [Accepted: 12/18/2023] [Indexed: 12/25/2023]
Abstract
Since the outbreak of COVID-19, efforts have been made towards semi-quantitative analysis of lung ultrasound (LUS) data to assess the patient's condition. Several methods have been proposed in this regard, with a focus on frame-level analysis, which was then used to assess the condition at the video and prognostic levels. However, no extensive work has been done to analyze lung conditions directly at the video level. This study proposes a novel method for video-level scoring based on compression of LUS video data into a single image and automatic classification to assess patient's condition. The method utilizes maximum, mean, and minimum intensity projection-based compression of LUS video data over time. This enables to preserve hyper- and hypo-echoic data regions, while compressing the video down to a maximum of three images. The resulting images are then classified using a convolutional neural network (CNN). Finally, the worst predicted score given among the images is assigned to the corresponding video. The results show that this compression technique can achieve a promising agreement at the prognostic level (81.62%), while the video-level agreement remains comparable with the state-of-the-art (46.19%). Conclusively, the suggested method lays down the foundation for LUS video compression, shifting from frame-level to direct video-level analysis of LUS data.
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Affiliation(s)
- Umair Khan
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy
| | - Sajjad Afrakhteh
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy
| | - Federico Mento
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy
| | - Gizem Mert
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy
| | - Andrea Smargiassi
- Pulmonary Medicine Unit, Department of Medical and Surgical Sciences, Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Rome, Italy
| | - Riccardo Inchingolo
- Pulmonary Medicine Unit, Department of Medical and Surgical Sciences, Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Rome, Italy
| | | | | | - Tiziano Perrone
- Dipartimento di Emergenza ed Urgenza, Humanitas Gavazzeni Bergamo, Bergamo, Italy
| | - Giovanni Iacca
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy
| | - Libertario Demi
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy.
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Zanardo AP, Brentano VB, Grando RD, Rambo RR, Hertz FT, Anflor LC, dos Santos JFP, Galvão GS, Andrade CF. Detection of subsolid nodules on chest CT scans during the COVID-19 pandemic. J Bras Pneumol 2024; 49:e20230300. [PMID: 38232254 PMCID: PMC10769470 DOI: 10.36416/1806-3756/e20230300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Accepted: 10/09/2023] [Indexed: 01/19/2024] Open
Abstract
OBJECTIVE To investigate the detection of subsolid nodules (SSNs) on chest CT scans of outpatients before and during the COVID-19 pandemic, as well as to correlate the imaging findings with epidemiological data. We hypothesized that (pre)malignant nonsolid nodules were underdiagnosed during the COVID-19 pandemic because of an overlap of imaging findings between SSNs and COVID-19 pneumonia. METHODS This was a retrospective study including all chest CT scans performed in adult outpatients (> 18 years of age) in September of 2019 (i.e., before the COVID-19 pandemic) and in September of 2020 (i.e., during the COVID-19 pandemic). The images were reviewed by a thoracic radiologist, and epidemiological data were collected from patient-filled questionnaires and clinical referrals. Regression models were used in order to control for confounding factors. RESULTS A total of 650 and 760 chest CT scans were reviewed for the 2019 and 2020 samples, respectively. SSNs were found in 10.6% of the patients in the 2019 sample and in 7.9% of those in the 2020 sample (p = 0.10). Multiple SSNs were found in 23 and 11 of the patients in the 2019 and 2020 samples, respectively. Women constituted the majority of the study population. The mean age was 62.8 ± 14.8 years in the 2019 sample and 59.5 ± 15.1 years in the 2020 sample (p < 0.01). COVID-19 accounted for 24% of all referrals for CT examination in 2020. CONCLUSIONS Fewer SSNs were detected on chest CT scans of outpatients during the COVID-19 pandemic than before the pandemic, although the difference was not significant. In addition to COVID-19, the major difference between the 2019 and 2020 samples was the younger age in the 2020 sample. We can assume that fewer SSNs will be detected in a population with a higher proportion of COVID-19 suspicion or diagnosis.
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Affiliation(s)
- Ana Paula Zanardo
- . Programa de Pós-Graduação em Ciências Pneumológicas, Universidade Federal do Rio Grande do Sul, Porto Alegre (RS) Brasil
- . Departamento de Radiologia, Hospital Moinhos de Vento, Porto Alegre (RS) Brasil
| | | | - Rafael Domingos Grando
- . Programa de Pós-Graduação em Ciências Pneumológicas, Universidade Federal do Rio Grande do Sul, Porto Alegre (RS) Brasil
- . Departamento de Radiologia, Hospital Moinhos de Vento, Porto Alegre (RS) Brasil
| | - Rafael Ramos Rambo
- . Programa de Pós-Graduação em Ciências Pneumológicas, Universidade Federal do Rio Grande do Sul, Porto Alegre (RS) Brasil
- . Departamento de Radiologia, Hospital Moinhos de Vento, Porto Alegre (RS) Brasil
| | | | - Luís Carlos Anflor
- . Departamento de Radiologia, Hospital Moinhos de Vento, Porto Alegre (RS) Brasil
- . Departamento de Medicina Interna, Universidade Federal de Ciências da Saúde de Porto Alegre, Porto Alegre (RS) Brasil
| | - Jônatas Fávero Prietto dos Santos
- . Programa de Pós-Graduação em Ciências Pneumológicas, Universidade Federal do Rio Grande do Sul, Porto Alegre (RS) Brasil
- . Departamento de Radiologia, Hospital Moinhos de Vento, Porto Alegre (RS) Brasil
| | - Gabriela Schneider Galvão
- . Programa de Pós-Graduação em Ciências Pneumológicas, Universidade Federal do Rio Grande do Sul, Porto Alegre (RS) Brasil
- . Departamento de Radiologia, Hospital Moinhos de Vento, Porto Alegre (RS) Brasil
| | - Cristiano Feijó Andrade
- . Serviço de Cirurgia Torácica e Pulmonar, Hospital Moinhos de Vento, Porto Alegre (RS) Brasil
- . Serviço de Cirurgia Torácica e Pulmonar, Hospital de Clínicas de Porto Alegre, Porto Alegre (RS) Brasil
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35
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Hashem HE, Ahmad S, Kumer A, Bakri YE. In silico and in vitro prediction of new synthesized N-heterocyclic compounds as anti-SARS-CoV-2. Sci Rep 2024; 14:1152. [PMID: 38212472 PMCID: PMC10784557 DOI: 10.1038/s41598-024-51443-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 01/04/2024] [Indexed: 01/13/2024] Open
Abstract
Computer-aided drug design has been employed to get the medicinal effects against Corona virus from different pyridine derivatives after synthesizing the new compounds. Additionally, various computational studies are also employed between the newly prepared pyridine derivatives and three controls against three proteins (6Y2E, 6M71 and 6M3M). Different methods were employed to synthesize new pyridine derivatives according to the literature using different reaction mediums. MTT was performed for cytotoxicity study and IC50 for inhibitory concentration. Additionally, in-silico studies including DFT, molecular docking, molecular dynamics, MMPBSA, ADME, pharmacokinetics and Lipinski rules were evaluated. The chemical structures of all new compounds were elucidated based on spectroscopic investigation. A molecular docking study demonstrated that compounds 5, 11, and 12 have the best binders of the SARS-CoV-2 main protease enzyme, with energy scores of - 7.5 kcal/mol, - 7.2 kcal/mol, and - 7.9 kcal/mol, respectively. The net binding energy values of the 11-Mpro, 12-Mpro, and 5-Mpro complexes revealed their highly stable nature in terms of both intermolecular interactions and docked conformation across the simulation time. ADME properties, besides the pharmacokinetics and Lipinski rules, showed that all seven newly synthesized compounds follow Lipinski rules with high GI absorption. The In Vitro antiviral study against SARS-CoV-2 using MTT methods confirms that compound 5 has more potential and is safer than other tested compounds. The study shows that the newly synthesized pyridine derivatives have medicinal properties against SARS-CoV-2 without violating Lipinski rules. Compounds 5, 11, and 12, particularly compound 5, may serve as promising potential candidate for COVID-19.
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Affiliation(s)
- Heba E Hashem
- Department of Chemistry, Faculty of Women, Ain Shams University, HeliopolisCairo, 11757, Egypt.
| | - Sajjad Ahmad
- Department of Health and Biological Sciences, Abasyn University, Peshawar, 25000, Pakistan
- Department of Natural Sciences, Lebanese American University, P.O. Box 36, Beirut, Lebanon
- Gilbert and Rose-Marie Chagoury School of Medicine, Lebanese American University, P.O. Box 36, Beirut, Lebanon
| | - Ajoy Kumer
- Department of Chemistry, College of Arts and Sciences, IUBAT-International University of Business Agriculture and Technology, Dhaka, 1230, Bangladesh
- Center for Global Health Research, Saveetha Institute of Medical and Technical Sciences in Saveetha Medical College and Hospital, Chennai, India
| | - Youness El Bakri
- Department of Theoretical and Applied Chemistry, South Ural State University, Lenin Prospect 76, Chelyabinsk, 454080, Russian Federation
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36
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Pezzutti DL, Makary MS. Role of Imaging in Diagnosis and Management of COVID-19: Evidence-Based Approaches. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2024; 1457:237-246. [PMID: 39283430 DOI: 10.1007/978-3-031-61939-7_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2025]
Abstract
Imaging has been demonstrated to play a crucial role in both the diagnosis and management of COVID-19. Depending on resources, pre-test probability, and risk factors for severe disease progression, real-time polymerase chain reaction (RT-PCR) testing may be followed by chest radiography (CXR) or chest computed tomography (CT) to further aid in diagnosis or excluding COVID-19 disease. SARS-CoV-2 has been shown not only to pathologically impact the pulmonary system, but also the cardiovascular, gastrointestinal, and neurological systems to name a few. Imaging has again proven useful in further investigating and managing extrapulmonary disease, with the use of echocardiogram, CT angiography of the cardiovascular and cerebrovascular structures, MRI of the brain, as well as ultrasound of the abdomen and CT of the abdomen and pelvis proving particularly useful. Research in artificial intelligence and its application in the diagnosis of COVID-19 and disease severity prediction is underway, and point-of-care ultrasound is an emerging bedside technique that may allow for more efficient and timely diagnosis of COVID-19.
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Affiliation(s)
- Dante L Pezzutti
- Department of Radiology, The Ohio State University Wexner Medical Center, 395 W. 12th Ave, 4th Floor, Columbus, OH, 43210, USA
| | - Mina S Makary
- Department of Radiology, The Ohio State University Wexner Medical Center, 395 W. 12th Ave, 4th Floor, Columbus, OH, 43210, USA.
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37
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Bailey GL, Copley SJ. CT features of acute COVID-19 and long-term follow-up. Clin Radiol 2024; 79:1-9. [PMID: 37867078 DOI: 10.1016/j.crad.2023.09.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2023] [Revised: 09/15/2023] [Accepted: 09/18/2023] [Indexed: 10/24/2023]
Abstract
Since the first few cases of pneumonia attributed to infection with the highly contagious novel coronavirus 2 (SARs-CoV-2) were detected in Wuhan, China, in December 2019, imaging has proven an invaluable diagnostic tool throughout the resulting global pandemic. This review describes the imaging features of severe pulmonary disease caused by SARs-CoV-2, named COVID-19 by the World Health Organization (WHO), particularly focussing on computed tomography (CT). CT plays an important role in understanding the pathology behind the progression of disease, as well as helping to identify the potential complications of COVID-19 pneumonia and recognising possible alternative or concurrent diagnoses. This review also focusses on follow-up imaging of survivors of COVID-19, which continues to contribute substantially to our understanding of the longer-term pulmonary changes in patients who have survived severe COVID-19 pneumonia.
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Affiliation(s)
- G L Bailey
- Radiology Department, Imperial College Healthcare NHS Trust, London, UK.
| | - S J Copley
- Radiology Department, Imperial College Healthcare NHS Trust, London, UK
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38
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Paredes-Manjarrez C, Avelar-Garnica FJ, Balderas-Chairéz AT, Arellano-Sotelo J, Córdova-Ramírez R, Espinosa-Poblano E, González-Ruíz A, Anda-Garay JC, Miguel-Puga JA, Jáuregui-Renaud K. Lung Ultrasound Elastography by SWE2D and "Fibrosis-like" Computed Tomography Signs after COVID-19 Pneumonia: A Follow-Up Study. J Clin Med 2023; 12:7515. [PMID: 38137584 PMCID: PMC10743512 DOI: 10.3390/jcm12247515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 11/29/2023] [Accepted: 12/01/2023] [Indexed: 12/24/2023] Open
Abstract
The aim of this study was to assess the shear wave velocity by LUS elastography (SWE2D) for the evaluation of superficial lung stiffness after COVID-19 pneumonia, according to "fibrosis-like" signs found by Computed Tomography (CT), considering the respiratory function. Seventy-nine adults participated in the study 42 to 353 days from symptom onset. Paired evaluations (SWE2D and CT) were performed along with the assessment of arterial blood gases and spirometry, three times with 100 days in between. During the follow-up and within each evaluation, the SWE2D velocity changed over time (MANOVA, p < 0.05) according to the extent of "fibrosis-like" CT signs by lung lobe (ANOVA, p < 0.05). The variability of the SWE2D velocity was consistently related to the first-second forced expiratory volume and the forced vital capacity (MANCOVA, p < 0.05), which changed over time with no change in blood gases. Covariance was also observed with age and patients' body mass index, the time from symptom onset until hospital admission, and the history of diabetes in those who required intensive care during the acute phase (MANCOVA, p < 0.05). After COVID-19 pneumonia, SWE2D velocity can be related to the extent and regression of "fibrotic-like" involvement of the lung lobes, and it could be a complementary tool in the follow-up after COVID-19 pneumonia.
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Affiliation(s)
- Carlos Paredes-Manjarrez
- Departamento de Imagenología, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico; (C.P.-M.); (A.T.B.-C.); (J.A.-S.); (R.C.-R.)
| | - Francisco J. Avelar-Garnica
- Departamento de Imagenología, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico; (C.P.-M.); (A.T.B.-C.); (J.A.-S.); (R.C.-R.)
| | - Andres Tlacaelel Balderas-Chairéz
- Departamento de Imagenología, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico; (C.P.-M.); (A.T.B.-C.); (J.A.-S.); (R.C.-R.)
| | - Jorge Arellano-Sotelo
- Departamento de Imagenología, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico; (C.P.-M.); (A.T.B.-C.); (J.A.-S.); (R.C.-R.)
| | - Ricardo Córdova-Ramírez
- Departamento de Imagenología, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico; (C.P.-M.); (A.T.B.-C.); (J.A.-S.); (R.C.-R.)
| | - Eliseo Espinosa-Poblano
- Departamento de Inhaloterapia y Neumología, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico; (E.E.-P.); (A.G.-R.)
| | - Alejandro González-Ruíz
- Departamento de Inhaloterapia y Neumología, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico; (E.E.-P.); (A.G.-R.)
| | - Juan Carlos Anda-Garay
- Departamento de Medicina Interna, Hospital de Especialidades del Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico;
| | - José Adan Miguel-Puga
- Unidad de Investigación Médica en Otoneurología, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico;
| | - Kathrine Jáuregui-Renaud
- Unidad de Investigación Médica en Otoneurología, Instituto Mexicano del Seguro Social, Ciudad de México 06720, Mexico;
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Kirkpatrick JN, Swaminathan M, Adedipe A, Garcia-Sayan E, Hung J, Kelly N, Kort S, Nagueh S, Poh KK, Sarwal A, Strachan GM, Topilsky Y, West C, Wiener DH. American Society of Echocardiography COVID-19 Statement Update: Lessons Learned and Preparation for Future Pandemics. J Am Soc Echocardiogr 2023; 36:1127-1139. [PMID: 37925190 DOI: 10.1016/j.echo.2023.08.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/06/2023]
Abstract
The COVID-19 pandemic has evolved since the publication of the initial American Society of Echocardiography (ASE) statements providing guidance to echocardiography laboratories. In light of new developments, the ASE convened a diverse, expert writing group to address the current state of the COVID-19 pandemic and to apply lessons learned to echocardiography laboratory operations in future pandemics. This statement addresses important areas specifically impacted by the current and future pandemics: (1) indications for echocardiography, (2) application of echocardiographic services in a pandemic, (3) infection/transmission mitigation strategies, (4) role of cardiac point-of-care ultrasound/critical care echocardiography, and (5) training in echocardiography.
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Affiliation(s)
| | | | | | | | - Judy Hung
- Massachusetts General Hospital, Boston, Massachusetts
| | - Noreen Kelly
- Sanger Heart Institute, Charlotte, North Carolina
| | - Smadar Kort
- Stony Brook University Medical Center, Stony Brook, New York
| | | | - Kian Keong Poh
- Department of Cardiology, National University of Singapore, Singapore
| | - Aarti Sarwal
- Wake Forest Baptist Health Center, Winston-Salem, North Carolina
| | - G Monet Strachan
- Division of Cardiology, University of California, San Francisco, California
| | - Yan Topilsky
- Tel-Aviv Sourasky Medical Center, Tel-Aviv, Israel
| | - Cathy West
- Royal Brompton Hospital, London, United Kingdom
| | - David H Wiener
- Jefferson Heart Institute, Thomas Jefferson University Hospital, Philadelphia, Pennsylvania
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40
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Ghafoori M, Hamidi M, Modegh RG, Aziz-Ahari A, Heydari N, Tavafizadeh Z, Pournik O, Emdadi S, Samimi S, Mohseni A, Khaleghi M, Dashti H, Rabiee HR. Predicting survival of Iranian COVID-19 patients infected by various variants including omicron from CT Scan images and clinical data using deep neural networks. Heliyon 2023; 9:e21965. [PMID: 38058649 PMCID: PMC10696006 DOI: 10.1016/j.heliyon.2023.e21965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Revised: 10/26/2023] [Accepted: 11/01/2023] [Indexed: 12/08/2023] Open
Abstract
Purpose: The rapid spread of the COVID-19 omicron variant virus has resulted in an overload of hospitals around the globe. As a result, many patients are deprived of hospital facilities, increasing mortality rates. Therefore, mortality rates can be reduced by efficiently assigning facilities to higher-risk patients. Therefore, it is crucial to estimate patients' survival probability based on their conditions at the time of admission so that the minimum required facilities can be provided, allowing more opportunities to be available for those who need them. Although radiologic findings in chest computerized tomography scans show various patterns, considering the individual risk factors and other underlying diseases, it is difficult to predict patient prognosis through routine clinical or statistical analysis. Method: In this study, a deep neural network model is proposed for predicting survival based on simple clinical features, blood tests, axial computerized tomography scan images of lungs, and the patients' planned treatment. The model's architecture combines a Convolutional Neural Network and a Long Short Term Memory network. The model was trained using 390 survivors and 108 deceased patients from the Rasoul Akram Hospital and evaluated 109 surviving and 36 deceased patients infected by the omicron variant. Results: The proposed model reached an accuracy of 87.5% on the test data, indicating survival prediction possibility. The accuracy was significantly higher than the accuracy achieved by classical machine learning methods without considering computerized tomography scan images (p-value <= 4E-5). The images were also replaced with hand-crafted features related to the ratio of infected lung lobes used in classical machine-learning models. The highest-performing model reached an accuracy of 84.5%, which was considerably higher than the models trained on mere clinical information (p-value <= 0.006). However, the performance was still significantly less than the deep model (p-value <= 0.016). Conclusion: The proposed deep model achieved a higher accuracy than classical machine learning methods trained on features other than computerized tomography scan images. This proves the images contain extra information. Meanwhile, Artificial Intelligence methods with multimodal inputs can be more reliable and accurate than computerized tomography severity scores.
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Affiliation(s)
- Mahyar Ghafoori
- Radiology Department, Hazrat Rasoul Akram Hospital, School of Medicine, Iran University of Medical Sciences, Hemmat, Tehran, 14535, Iran
| | - Mehrab Hamidi
- BCB Lab, Department of Computer Engineering, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
- AI-Med Group, AI Innovation Center, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
| | - Rassa Ghavami Modegh
- Data science and Machine learning Lab, Department of Computer Engineering, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
- BCB Lab, Department of Computer Engineering, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
- AI-Med Group, AI Innovation Center, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
| | - Alireza Aziz-Ahari
- Radiology Department, Hazrat Rasoul Akram Hospital, School of Medicine, Iran University of Medical Sciences, Hemmat, Tehran, 14535, Iran
| | - Neda Heydari
- Radiology Department, Hazrat Rasoul Akram Hospital, School of Medicine, Iran University of Medical Sciences, Hemmat, Tehran, 14535, Iran
| | - Zeynab Tavafizadeh
- Radiology Department, Hazrat Rasoul Akram Hospital, School of Medicine, Iran University of Medical Sciences, Hemmat, Tehran, 14535, Iran
| | - Omid Pournik
- Radiology Department, Hazrat Rasoul Akram Hospital, School of Medicine, Iran University of Medical Sciences, Hemmat, Tehran, 14535, Iran
| | - Sasan Emdadi
- AI-Med Group, AI Innovation Center, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
| | - Saeed Samimi
- AI-Med Group, AI Innovation Center, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
| | - Amir Mohseni
- BCB Lab, Department of Computer Engineering, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
- AI-Med Group, AI Innovation Center, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
| | - Mohammadreza Khaleghi
- Radiology Department, Hazrat Rasoul Akram Hospital, School of Medicine, Iran University of Medical Sciences, Hemmat, Tehran, 14535, Iran
| | - Hamed Dashti
- AI-Med Group, AI Innovation Center, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
| | - Hamid R. Rabiee
- Data science and Machine learning Lab, Department of Computer Engineering, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
- BCB Lab, Department of Computer Engineering, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
- AI-Med Group, AI Innovation Center, Sharif University of Technology, Azadi, Tehran, 11365-8639, Iran
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41
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Swenson K, Uribe JP, Ayala A, Parikh M, Zhang C, Paton A, Trachtenberg M, Majid A. Pleural Disease in Acute COVID-19 Pneumonia: A Single Center Retrospective Cohort Study. J Bronchology Interv Pulmonol 2023; 30:363-367. [PMID: 36190553 DOI: 10.1097/lbr.0000000000000896] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 08/19/2022] [Indexed: 06/16/2023]
Abstract
BACKGROUND Pleural diseases encompass pleural effusion and pneumothorax (PTX), both of which were uncommon in coronavirus disease of 2019 (COVID-19). We aimed to describe the frequency, characteristics, and main outcomes of these conditions in patients with COVID-19 pneumonia. METHODS We performed a retrospective cohort analysis of inpatients with COVID-19 pneumonia between January 1, 2020 and January 1, 2022, at Beth Israel Deaconess Medical Center in Boston, Massachusetts. RESULTS Among 4419 inpatients with COVID-19 pneumonia, 109 (2.5%) had concurrent pleural disease. Ninety-four (2.1%) had pleural effusion (50% seen on admission) and 15 (0.3%) had PTX, both with higher rates of underlying conditions such as heart failure, liver disease, kidney disease, and malignancy. A total of 28 (30%) pleural effusions were drained resulting in 32% being exudative, 43% pseudoexudative, and 25% transudative. Regarding PTX, 5 (33%) were spontaneous and 10 (67%) were due to barotrauma while on mechanical ventilation. We found that the presence of underlying lung disease was not associated with an increased risk of developing PTX. In addition, patients with pleural disease had a higher incidence of severe or critical illness as represented by intensive care unit admission and intubation, longer hospital and intensive care unit stay, and a higher mortality rate as compared with patients without the pleural disease. CONCLUSION Pleural effusions and pneumothoraces are infrequent findings in patients admitted due to COVID-19 pneumonia, worsened outcomes in these patients likely reflect an interplay between the severity of inflammation and parenchymal injury due to COVID-19 disease and underlying comorbidities.
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Affiliation(s)
- Kai Swenson
- Division of Thoracic Surgery and Interventional Pulmonology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA
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42
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M Abd El-Halim R, Hafez H, Albahet I, Sherif B. Respiratory co-infections in COVID-19-positive patients. Eur J Med Res 2023; 28:317. [PMID: 37660059 PMCID: PMC10474635 DOI: 10.1186/s40001-023-01305-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 08/19/2023] [Indexed: 09/04/2023] Open
Abstract
BACKGROUND Opportunistic respiratory infections may complicate critically ill patients with COVID-19. Early detection of co-infections helps to administrate the appropriate antimicrobial agent, to guard against patient deterioration. This study aimed at estimating co-infections in COVID-19-positive patients. METHODS Eighty-nine COVID-19-positive patients confirmed by SARS-COV-2 PCR were tested for post-COVID-19 lower respiratory tract co-infections through bacterial culture, fungal culture and galactomannan (GM) testing. RESULTS Fourteen patients showed positive coinfection with Klebsiella, nine with Acinetobacter, six with Pseudomonas and three with E. coli. As for fungal infections, nine showed coinfection with Aspergillus, two with Zygomycetes and four with Candida. Galactomannan was positive among one patient with Aspergillus coinfection, one with Zygomycetes coinfection and three with Candida, 13 samples with negative fungal culture were positive for GM. Ten samples showed positive fungal growth, however, GM test was negative. CONCLUSION In our study, SARS-COV-2 respiratory coinfections were mainly implicated by bacterial pathogens; most commonly Klebsiella species (spp.), Aspergillus spp. were the most common cause of fungal coinfections, GM test showed low positive predictive value for fungal infection. Respiratory coinfections may complicate SARS-COV-2 probably due to the prolonged intensive care units (ICU) hospitalization, extensive empiric antimicrobial therapy, steroid therapy, mechanical ventilation during the COVID-19 outbreak. Antimicrobial stewardship programs are required so that antibiotics are prescribed judiciously according to the culture results.
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Affiliation(s)
- Rania M Abd El-Halim
- Clinical Pathology Department, Faculty of Medicine Ain Shams University, Cairo, 11566, Egypt
| | - Hala Hafez
- Clinical Pathology Department, Faculty of Medicine Ain Shams University, Cairo, 11566, Egypt
| | - Ibrahim Albahet
- Anaesthesia, Intensive Care and pain management department, Faculty of Medicine-Ain Shams University, Cairo, Egypt
| | - Basma Sherif
- Clinical Pathology Department, Faculty of Medicine Ain Shams University, Cairo, 11566, Egypt.
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43
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O’Leary J, McAndrew J, Shukralla A, Murphy K. Neuropsychiatric manifestations in a patient with prolonged COVID-19 encephalopathy: case report and literature review. Ir J Psychol Med 2023; 40:487-490. [PMID: 34544516 PMCID: PMC8523973 DOI: 10.1017/ipm.2021.67] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Revised: 08/31/2021] [Accepted: 09/06/2021] [Indexed: 11/06/2022]
Abstract
While the respiratory complications of COVID-19 infection are now well known, psychiatric manifestations are an emerging issue. We report a case of prolonged encephalopathy secondary to COVID-19 which was associated with prominent neuropsychiatric features. The patient went on to develop sub-clinical seizures, a rare but recognised complication of SARS-CoV-2.
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Affiliation(s)
- J. O’Leary
- Department of Liaison Psychiatry, Beaumont Hospital, Dublin, Ireland
| | - J. McAndrew
- Department of Liaison Psychiatry, Beaumont Hospital, Dublin, Ireland
| | - A. Shukralla
- Department of Neurology, Beaumont Hospital, Dublin, Ireland
| | - K.C. Murphy
- Department of Liaison Psychiatry, Beaumont Hospital, Dublin, Ireland
- Department of Psychiatry, Royal College of Surgeons in Ireland, Dublin, Ireland
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44
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Dave SB, Rabinowitz R, Shah A, Tabatabai A, Galvagno SM, Mazzeffi MA, Rector R, Kaczorowski DJ, Scalea TM, Menaker J. COVID-19 outcomes of venovenous extracorporeal membrane oxygenation for acute respiratory failure vs historical cohort of non-COVID-19 viral infections. Perfusion 2023; 38:1165-1173. [PMID: 35653427 PMCID: PMC9168413 DOI: 10.1177/02676591221105603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
INTRODUCTION Veno-venous extracorporeal membrane oxygenation (VV ECMO) has become a support modality for patients with acute respiratory failure refractory to standard therapies. VV ECMO has been increasingly used during the current COVID-19 pandemic for patients with refractory respiratory failure. The object of this study was to evaluate the outcomes of VV ECMO in patients with COVID-19 compared to patients with non-COVID-19 viral infections. METHODS We retrospectively reviewed all patients supported with VV ECMO between 8/2014 and 8/2020 whose etiology of illness was a viral pulmonary infection. The primary outcome of this study was to evaluate in-hospital mortality. The secondary outcomes included length of ECMO course, ventilator duration, hospital length of stay, incidence of adverse events through ECMO course. RESULTS Eighty-nine patients were included (35 COVID-19 vs 54 non-COVID-19). Forty (74%) of the non-COVID-19 patients had influenza virus. Prior to cannulation, COVID-19 patients had longer ventilator duration (3 vs 1 day, p = .003), higher PaCO2 (64 vs 53 mmHg, p = .012), and white blood cell count (14 vs 9 ×103/μL, p = .004). Overall in-hospital mortality was 33.7% (n = 30). COVID-19 patients had a higher mortality (49% vs. 24%, p = .017) when compared to non-COVID-19 patients. COVID-19 survivors had longer median time on ECMO than non-COVID-19 survivors (24.4 vs 16.5 days p = .03) but had a similar hospital length of stay (HLOS) (41 vs 48 Extracorporeal Membrane Oxygenationdays p = .33). CONCLUSION COVID-19 patients supported with VV ECMO have a higher mortality than non-COVID-19 patients. While COVID-19 survivors had significantly longer VV ECMO runs than non-COVID-19 survivors, HLOS was similar. This data add to a growing body of literature supporting the use of ECMO for potentially reversible causes of respiratory failure.
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Affiliation(s)
- Sagar B Dave
- Department of Emergency Medicine,
Department of Anesthesiology, Division of Critical Care,
Emory
University School of Medicine, Atlanta,
GA, USA
| | - Ronald Rabinowitz
- Department of Medicine, Program in
Trauma, R Adams Cowley Shock Trauma Center, University of Maryland School of
Medicine, Baltimore, MD, USA
| | - Aakash Shah
- Department of Surgery, Division of
Cardiac Surgery, University of Maryland School of
Medicine, Baltimore, MD, USA
| | - Ali Tabatabai
- Department of Medicine, Division of
Pulmonary and Critical Care, Program in Trauma, R Adams Cowley Shock Trauma
Center, University
of Maryland School of Medicine,
Baltimore, MD, USA
| | - Samuel M Galvagno
- Department of Anesthesiology,
Program in Trauma, R Adams Cowley Shock Trauma Center,
University
of Maryland School of Medicine,
Baltimore, MD, USA
| | - Michael A Mazzeffi
- Department of Anesthesiology and
Critical Care Medicine, George Washington School of Medicine and
Health Sciences, Washington, DC,
USA
| | - Raymond Rector
- Perfusion Services,
University
of Maryland Medical Center, Baltimore,
MD, USA
| | - David J Kaczorowski
- Department of Cardiothoracic
Surgery, University
of Pittsburgh Medical Center,
Pittsburgh, PA, USA
| | - Thomas M Scalea
- Department of Surgery, Program in
Trauma, R Adams Cowley Shock Trauma Center, University of Maryland School of
Medicine, Baltimore, MD, USA
| | - Jay Menaker
- Department of Surgery, Johns
Hopkins Medicine, Howard County General
Hospital, Columbia, MD, USA
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45
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Díaz-Lozano M, Guijo-Rubio D, Gutiérrez PA, Hervás-Martínez C. Cluster analysis and forecasting of viruses incidence growth curves: Application to SARS-CoV-2. EXPERT SYSTEMS WITH APPLICATIONS 2023; 225:120103. [PMID: 37090447 PMCID: PMC10108563 DOI: 10.1016/j.eswa.2023.120103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 03/24/2023] [Accepted: 04/08/2023] [Indexed: 05/03/2023]
Abstract
The sanitary emergency caused by COVID-19 has compromised countries and generated a worldwide health and economic crisis. To provide support to the countries' responses, numerous lines of research have been developed. The spotlight was put on effectively and rapidly diagnosing and predicting the evolution of the pandemic, one of the most challenging problems of the past months. This work contributes to the existing literature by developing a two-step methodology to analyze the transmission rate, designing models applied to territories with similar pandemic behavior characteristics. Virus transmission is considered as bacterial growth curves to understand the spread of the virus and to make predictions about its future evolution. Hence, an analytical clustering procedure is first applied to create groups of locations where the virus transmission rate behaved similarly in the different outbreaks. A curve decomposition process based on an iterative polynomial process is then applied, obtaining meaningful forecasting features. Information of the territories belonging to the same cluster is merged to build models capable of simultaneously predicting the 14-day incidence in several locations using Evolutionary Artificial Neural Networks. The methodology is applied to Andalusia (Spain), although it is applicable to any region across the world. Individual models trained for a specific territory are carried out for comparison purposes. The results demonstrate that this methodology achieves statistically similar, or even better, performance for most of the locations. In addition to being extremely competitive, the main advantage of the proposal lies in its complexity cost reduction. The total number of parameters to be estimated is reduced up to 93.51% for the short term and 93.31% for the mid-term forecasting, respectively. Moreover, the number of required models is reduced by 73.53% and 58.82% for the short- and mid-term forecasting horizons.
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Affiliation(s)
- Miguel Díaz-Lozano
- Maimonides Institute for Biomedical Research of Córdoba (IMIBIC), 14004 Córdoba, Spain
- Department of Computer Science and Numerical Analysis, University of Cordoba, 14071 Cordoba, Spain
| | - David Guijo-Rubio
- School of Computing Sciences, University of East Anglia, NR4 7TJ Norwich, United Kingdom
- Department of Computer Science and Numerical Analysis, University of Cordoba, 14071 Cordoba, Spain
| | - Pedro Antonio Gutiérrez
- Department of Computer Science and Numerical Analysis, University of Cordoba, 14071 Cordoba, Spain
| | - César Hervás-Martínez
- Department of Computer Science and Numerical Analysis, University of Cordoba, 14071 Cordoba, Spain
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46
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Zhang J, Liu Y, Lei B, Sun D, Wang S, Zhou C, Ding X, Chen Y, Chen F, Wang T, Huang R, Chen K. GIONet: Global information optimized network for multi-center COVID-19 diagnosis via COVID-GAN and domain adversarial strategy. Comput Biol Med 2023; 163:107113. [PMID: 37307643 PMCID: PMC10242645 DOI: 10.1016/j.compbiomed.2023.107113] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2023] [Revised: 05/14/2023] [Accepted: 05/30/2023] [Indexed: 06/14/2023]
Abstract
The outbreak of coronavirus disease (COVID-19) in 2019 has highlighted the need for automatic diagnosis of the disease, which can develop rapidly into a severe condition. Nevertheless, distinguishing between COVID-19 pneumonia and community-acquired pneumonia (CAP) through computed tomography scans can be challenging due to their similar characteristics. The existing methods often perform poorly in the 3-class classification task of healthy, CAP, and COVID-19 pneumonia, and they have poor ability to handle the heterogeneity of multi-centers data. To address these challenges, we design a COVID-19 classification model using global information optimized network (GIONet) and cross-centers domain adversarial learning strategy. Our approach includes proposing a 3D convolutional neural network with graph enhanced aggregation unit and multi-scale self-attention fusion unit to improve the global feature extraction capability. We also verified that domain adversarial training can effectively reduce feature distance between different centers to address the heterogeneity of multi-center data, and used specialized generative adversarial networks to balance data distribution and improve diagnostic performance. Our experiments demonstrate satisfying diagnosis results, with a mixed dataset accuracy of 99.17% and cross-centers task accuracies of 86.73% and 89.61%.
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Affiliation(s)
- Jing Zhang
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Yiyao Liu
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, 518000, China
| | - Baiying Lei
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, 518000, China
| | - Dandan Sun
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Siqi Wang
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Changning Zhou
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Xing Ding
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Yang Chen
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Fen Chen
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Tianfu Wang
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, 518000, China
| | - Ruidong Huang
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China
| | - Kuntao Chen
- Department of Radiology, The Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai, 518000, China.
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47
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Li W, Cao Y, Wang S, Wan B. Fully feature fusion based neural network for COVID-19 lesion segmentation in CT images. Biomed Signal Process Control 2023; 86:104939. [PMID: 37082352 PMCID: PMC10083211 DOI: 10.1016/j.bspc.2023.104939] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 03/07/2023] [Accepted: 04/05/2023] [Indexed: 04/22/2023]
Abstract
Coronavirus Disease 2019 (COVID-19) spreads around the world, seriously affecting people's health. Computed tomography (CT) images contain rich semantic information as an auxiliary diagnosis method. However, the automatic segmentation of COVID-19 lesions in CT images faces several challenges, including inconsistency in size and shape of the lesion, the high variability of the lesion, and the low contrast of pixel values between the lesion and normal tissue surrounding the lesion. Therefore, this paper proposes a Fully Feature Fusion Based Neural Network for COVID-19 Lesion Segmentation in CT Images (F3-Net). F3-Net uses an encoder-decoder architecture. In F3-Net, the Multiple Scale Module (MSM) can sense features of different scales, and Dense Path Module (DPM) is used to eliminate the semantic gap between features. The Attention Fusion Module (AFM) is the attention module, which can better fuse the multiple features. Furthermore, we proposed an improved loss function L o s s C o v i d - B C E that pays more attention to the lesions based on the prior knowledge of the distribution of COVID-19 lesions in the lungs. Finally, we verified the superior performance of F3-Net on a COVID-19 segmentation dataset, experiments demonstrate that the proposed model can segment COVID-19 lesions more accurately in CT images than benchmarks of state of the art.
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Affiliation(s)
- Wei Li
- Key Laboratory of Intelligent Computing in Medical Image (MIIC), Northeastern University, Ministry of Education, Shenyang, China
| | - Yangyong Cao
- School of Computer Science and Engineering, Northeastern University, Shenyang, China
| | - Shanshan Wang
- School of Computer Science and Engineering, Northeastern University, Shenyang, China
| | - Bolun Wan
- School of Computer Science and Engineering, Northeastern University, Shenyang, China
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48
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Sagreiya H, Jacobs MA, Akhbardeh A. Automated Lung Ultrasound Pulmonary Disease Quantification Using an Unsupervised Machine Learning Technique for COVID-19. Diagnostics (Basel) 2023; 13:2692. [PMID: 37627951 PMCID: PMC10453777 DOI: 10.3390/diagnostics13162692] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Revised: 07/30/2023] [Accepted: 08/11/2023] [Indexed: 08/27/2023] Open
Abstract
COVID-19 is an ongoing global health pandemic. Although COVID-19 can be diagnosed with various tests such as PCR, these tests do not establish pulmonary disease burden. Whereas point-of-care lung ultrasound (POCUS) can directly assess the severity of characteristic pulmonary findings of COVID-19, the advantage of using US is that it is inexpensive, portable, and widely available for use in many clinical settings. For automated assessment of pulmonary findings, we have developed an unsupervised learning technique termed the calculated lung ultrasound (CLU) index. The CLU can quantify various types of lung findings, such as A or B lines, consolidations, and pleural effusions, and it uses these findings to calculate a CLU index score, which is a quantitative measure of pulmonary disease burden. This is accomplished using an unsupervised, patient-specific approach that does not require training on a large dataset. The CLU was tested on 52 lung ultrasound examinations from several institutions. CLU demonstrated excellent concordance with radiologist findings in different pulmonary disease states. Given the global nature of COVID-19, the CLU would be useful for sonographers and physicians in resource-strapped areas with limited ultrasound training and diagnostic capacities for more accurate assessment of pulmonary status.
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Affiliation(s)
- Hersh Sagreiya
- Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Michael A. Jacobs
- The Russell H. Morgan Department of Radiology and Radiological Science, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA
- Department of Diagnostic and Interventional Imaging, The University of Texas Health Science Center, Houston, TX 77030, USA
| | - Alireza Akhbardeh
- Department of Diagnostic and Interventional Imaging, The University of Texas Health Science Center, Houston, TX 77030, USA
- Ambient Digital LLC, Daly City, CA 94014, USA
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49
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Zaeri N. Artificial intelligence and machine learning responses to COVID-19 related inquiries. J Med Eng Technol 2023; 47:301-320. [PMID: 38625639 DOI: 10.1080/03091902.2024.2321846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2021] [Accepted: 02/18/2024] [Indexed: 04/17/2024]
Abstract
Researchers and scientists can use computational-based models to turn linked data into useful information, aiding in disease diagnosis, examination, and viral containment due to recent artificial intelligence and machine learning breakthroughs. In this paper, we extensively study the role of artificial intelligence and machine learning in delivering efficient responses to the COVID-19 pandemic almost four years after its start. In this regard, we examine a large number of critical studies conducted by various academic and research communities from multiple disciplines, as well as practical implementations of artificial intelligence algorithms that suggest potential solutions in investigating different COVID-19 decision-making scenarios. We identify numerous areas where artificial intelligence and machine learning can impact this context, including diagnosis (using chest X-ray imaging and CT imaging), severity, tracking, treatment, and the drug industry. Furthermore, we analyse the dilemma's limits, restrictions, and hazards.
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Affiliation(s)
- Naser Zaeri
- Faculty of Computer Studies, Arab Open University, Kuwait
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50
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Kobayashi H, Takeuchi S, Torii Y, Ikenouchi T, Kawada JI, Oka K, Kato S, Ogawa M. Time course of skin rash, computed tomography findings, and viral load in a rheumatoid arthritis patient with severe varicella pneumonia. IDCases 2023; 33:e01866. [PMID: 37559973 PMCID: PMC10407726 DOI: 10.1016/j.idcr.2023.e01866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 07/28/2023] [Accepted: 07/28/2023] [Indexed: 08/11/2023] Open
Abstract
Varicella-zoster virus (VZV) infection in adults or immunocompromised patients has a more severe presentation compared to the mild disease in children. To the best of our knowledge, no reports have described the clinical course of VZV pneumonia focusing on time course of skin rash, chest computed tomography (CT) findings, and viral load. Furthermore, no reports have described the reactivation of human herpes virus 6 (HHV-6) in VZV pneumonia. Here, we report a case of severe VZV pneumonia that resulted in reactivation of HHV-6 in a patient with rheumatoid arthritis (RA). A 66-year-old female treated for RA was admitted to our hospital with papules. Her chest CT showed granular infiltrates, micronodules, and ground-glass opacities. The day after admission, because the typical skin rashes and chest CT findings were observed, she was diagnosed with VZV pneumonia and treated with acyclovir. Her skin rash then crusted over five days and entered the healing process, whereas it took approximately two weeks for her respiratory condition and chest CT findings to improve. In addition, VZV deoxyribonucleic acid (DNA) gradually decreased with treatment. On the 34th day of admission, VZV DNA was not found in the serum sample but remained in the sputum sample. Furthermore, although reactivation of HHV-6 was observed, viremia resolved without treatment. Clinicians should be able to recognize the differences in the improvement of skin rashes, respiratory status, and chest CT findings. In addition, treatment for HHV-6 reactivation should be carefully determined for each case.
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Affiliation(s)
- Hironori Kobayashi
- Department of Respiratory Medicine, Handa City Hospital, 2-29 Touyou-cho, Handa-shi, Aichi 475-8599, Japan
| | - Shunta Takeuchi
- Department of Respiratory Medicine, Handa City Hospital, 2-29 Touyou-cho, Handa-shi, Aichi 475-8599, Japan
| | - Yuka Torii
- Department of Pediatrics, Nagoya University Graduate School of Medicine, 65 Tsurumai-cho, Showa-ku, Nagoya 466-8550, Japan
| | - Tadasuke Ikenouchi
- Department of Respiratory Medicine, Handa City Hospital, 2-29 Touyou-cho, Handa-shi, Aichi 475-8599, Japan
| | - Jun-ichi Kawada
- Department of Pediatrics, Nagoya University Graduate School of Medicine, 65 Tsurumai-cho, Showa-ku, Nagoya 466-8550, Japan
| | - Keisuke Oka
- Department of Infectious Diseases, Nagoya University Hospital, 65 Tsurumai-cho, Showa-ku, Nagoya 466-8550, Japan
| | - Sayaka Kato
- Department of Respiratory Medicine, Handa City Hospital, 2-29 Touyou-cho, Handa-shi, Aichi 475-8599, Japan
| | - Masahiro Ogawa
- Department of Respiratory Medicine, Handa City Hospital, 2-29 Touyou-cho, Handa-shi, Aichi 475-8599, Japan
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