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Kim DK, Chong Y, Baek J, Chung C. Non-surgical resolution of a delayed esophagopleural fistula caused by tuberculous mediastinal lymphadenitis: Diagnostic challenges and therapeutic success. Diagn Microbiol Infect Dis 2025; 112:116834. [PMID: 40252584 DOI: 10.1016/j.diagmicrobio.2025.116834] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2025] [Revised: 04/02/2025] [Accepted: 04/03/2025] [Indexed: 04/21/2025]
Abstract
BACKGROUND Esophagopleural fistula (EPF) is an abnormal pathological communication between the esophagus and the pleural space. While EPF is typically associated with malignancy or iatrogenic injury, tuberculosis (TB) is a rare cause, with only a limited number reported cases. Here, we present a case of TB related EPF that developed following diagnostic surgery and was successfully treated with anti-TB therapy alone, without the need for surgical intervention. CASE PRESENTATION A 58-year-old male presented with a three-month history of a six-kilogram weight loss, chronic cough and sputum production. Chest computed tomography (CT) revealed necrotic lymphadenopathy with air bubbles within the 2R lymph node, located in the paratracheal region just below the origin of subclavian artery, raising suspicion for primary lung cancer. Endobronchial ultrasound-guided transbronchial needle aspiration (EBUS-TBNA) was performed, but histopathological analysis revealed only non-neoplastic bronchial tissue and lymphoid aggregates. Given the detection of a hypermetabolic lesion in the 2R lymph node on positron emission tomography-computed tomography (PET-CT), raising suspicion of malignancy, a surgical biopsy was performed. However, histopathological examination revealed only chronic active inflammation. One-month postoperatively, the patient developed EPF, which was initially managed with nasogastric tube feeding and antibiotics for aspiration pneumonia. Microbiological tests, including sputum and bronchoscopic washing, were unremarkable. The patient was discharged after approximately 40 days at his request, despite persistent EPF without clinical improvement. Four months later, he was re-admitted due to worsening aspiration symptoms and progressive lung lesions. Repeat microbiological testing ultimately confirmed pulmonary TB, with positive acid-fast bacilli (AFB) staining and Xpert MTB/RIF assay results. Standard four-drug anti-TB therapy led to significant clinical improvement, with complete resolution of the EPF on follow-up CT after six months. The patient fully recovered without surgical intervention. CONCLUSIONS This case highlights the diagnostic challenges of TB presenting as isolated lymphadenopathy and underscores the importance of repeated testing for accurate diagnosis. Furthermore, it demonstrates that TB-related EPF can be successfully managed with medical therapy alone, even in cases of advanced disease.
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Affiliation(s)
- Duk Ki Kim
- Division of Pulmonology and Critical Care Medicine, Department of Internal Medicine, College of Medicine, Chungnam National University, Daejeon 34134, Republic of Korea
| | - Yooyoung Chong
- Thoracic and Cardiovascular Surgery, School of Medicine, Chungnam National University, Munhwa-ro 282, Jung-Gu, Daejeon 35015, Republic of Korea
| | - Jeeyeon Baek
- Division of Pulmonology and Critical Care Medicine, Department of Internal Medicine, College of Medicine, Chungnam National University, Daejeon 34134, Republic of Korea
| | - Chaeuk Chung
- Division of Pulmonology and Critical Care Medicine, Department of Internal Medicine, College of Medicine, Chungnam National University, Daejeon 34134, Republic of Korea.
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2
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Singh P, Bhati SK, Jain M, Singh RP, Muthukumaran J, Singh AK. Targeting Mycobacterium tuberculosis: identification of potential phytochemicals from traditional plants against glucosyl-3-phosphoglycerate phosphatase (GpgP). J Biomol Struct Dyn 2025:1-9. [PMID: 40448691 DOI: 10.1080/07391102.2025.2509789] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Accepted: 05/26/2024] [Indexed: 06/02/2025]
Abstract
Tuberculosis (TB) is a transmissible disease that causes severe infections in adults as well as in infants, as they have immature immune systems. Lungs are the main site for pulmonary TB infection, although TB can affect other parts like lymph nodes, bone, joints, etc., which is known as extrapulmonary TB. M. tuberculosis is becoming one of the world's most severe pathogens due to growing multidrug resistance (MDR) and extensively drug resistance (XDR), rendering treatment medications useless. GpgP was chosen as the promising drug target protein in this study because it is primarily involved in the catalysis of the second step in the production of Methylglucose lipopolysaccharides (MGLPs), which regulate the synthesis of mycolic acids, which are an essential component for building the mycobacterial cell envelope. The cell envelope of M. tuberculosis is unique and is responsible for the bacteria's flexibility and pathogenicity. An in-house library of phytochemicals was utilized for screening in AutoDock Vina, and then the ligands were docked using AutoDock with the drug target protein for further validation. Then, four ligands were filtered out using SwissADME that were further studied by performing molecular dynamic simulations. After a thorough analysis, CID_446611 and CID_5282146 ligands were identified as potential inhibitors of GpgP.
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Affiliation(s)
- Pratyaksha Singh
- School of Biotechnology, Gautam Buddha University, Greater Noida, U.P., India
- Department of Biotechnology, Sharda School of Engineering and Technology, Sharda University, Greater Noida, U.P., India
| | - Saurabh Kumar Bhati
- Department of Biotechnology, Sharda School of Engineering and Technology, Sharda University, Greater Noida, U.P., India
| | - Monika Jain
- Department of Biotechnology, Sharda School of Engineering and Technology, Sharda University, Greater Noida, U.P., India
| | - Rashmi Prabha Singh
- Department of Life Science, Sharda School of Basic Sciences and Research, Sharda University, Greater Noida, U.P., India
| | - Jayaraman Muthukumaran
- Department of Biotechnology, Sharda School of Engineering and Technology, Sharda University, Greater Noida, U.P., India
| | - Amit Kumar Singh
- Department of Biotechnology, Sharda School of Engineering and Technology, Sharda University, Greater Noida, U.P., India
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3
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Dastani M, Mardaneh J, Rostamian M. Large language models' capabilities in responding to tuberculosis medical questions: testing ChatGPT, Gemini, and Copilot. Sci Rep 2025; 15:18004. [PMID: 40410343 PMCID: PMC12102205 DOI: 10.1038/s41598-025-03074-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2025] [Accepted: 05/19/2025] [Indexed: 05/25/2025] Open
Abstract
This study aims to evaluate the capability of Large Language Models (LLMs) in responding to questions related to tuberculosis. Three large language models (ChatGPT, Gemini, and Copilot) were selected based on public accessibility criteria and their ability to respond to medical questions. Questions were designed across four main domains (diagnosis, treatment, prevention and control, and disease management). The responses were subsequently evaluated using DISCERN-AI and NLAT-AI assessment tools. ChatGPT achieved higher scores (4 out of 5) across all domains, while Gemini demonstrated superior performance in specific areas such as prevention and control with a score of 4.4. Copilot showed the weakest performance in disease management with a score of 3.6. In the diagnosis domain, all three models demonstrated equivalent performance (4 out of 5). According to the DISCERN-AI criteria, ChatGPT excelled in information relevance but showed deficiencies in providing sources and information production dates. All three models exhibited similar performance in balance and objectivity indicators. While all three models demonstrate acceptable capabilities in responding to medical questions related to tuberculosis, they share common limitations such as insufficient source citation and failure to acknowledge response uncertainties. Enhancement of these models could strengthen their role in providing medical information.
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Affiliation(s)
- Meisam Dastani
- Infectious Diseases Research Center, Gonabad University of Medical Sciences, Gonabad, Iran
| | - Jalal Mardaneh
- Department of Microbiology, Infectious Diseases Research Center, School of Medicine, Gonabad University of Medical Sciences, Gonabad, Iran
| | - Morteza Rostamian
- English Department, School of Medicine, Gonabad University of Medical Sciences, Gonabad, Iran.
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Mahnashi MH, Ramachandraiah PKS, Al Awadh AA, Almazni IA, Asiri YI, Shaikh IA, Mannasaheb BA, Avunoori S, Khan AA, Joshi SD. Design, synthesis and in silico molecular modelling studies of 2-Hydrazineyl-2-oxoethyl-4-(1H-pyrrol-1-yb) benzoate derivatives: a potent dual DHFR and ENR-reductase inhibitors with antitubercular, antibacterial and cytotoxic potential. PLoS One 2025; 20:e0323702. [PMID: 40388480 PMCID: PMC12088000 DOI: 10.1371/journal.pone.0323702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2024] [Accepted: 04/13/2025] [Indexed: 05/21/2025] Open
Abstract
The current research includes the study of 28 new 2-hydrazineyl-2-oxoethyl-4-(1H-pyrrol-1-yl) benzoate derivatives as antitubercular, antibacterial, and enoyl-ACP reductase enzyme inhibitors. SYBYL-X.2.0 was used to investigate the molecular docking of ENR-ACP reductase/InhA in complex with 1-cyclohexyl-N-(3,5-dichlorophenyl)-5-oxopyrrolidine-3-carboxamide (PDB ID:4TZK) and MtDHFR in complex with methotrexate (PDB ID:1DF7). All of the reported derivatives have two or more H-bonding interactions with TYR158 and the cofactor NAD + , which fit snugly into InhA's binding pocket, with MIC values of 0.8-3.12 µg/mL, 0.4-3.12 µg/mL, and 1.6-12.5 µg/mL [4(a-e), 5(a-p), 6(a-e)]. Also, the molecular H-bonding interactions of reported molecules with amino acids ARG32 and ARG60 of MtDHFR showed the interaction of molecules with targeted site. All of the reported compounds showed good activity against M. tuberculosis H37Rv, Gram-negative E.coli, and Gram-positive S. aureus, respectively. Compounds 5b and 6d showed highest antitubercular activity with the MIC value of 0.8 µg/mL. InhA inhibition was good to moderate in the tested compounds, with IC50 inhibition ranging from 9 to 51% at 50μM; and MtDHFR inhibition was good with IC50 values ranging from 23 to 153 µM compared to trimethoprim at 92 µM. The most potent compounds exhibiting dual enzyme inhibition were further evaluated for cytotoxicity in mammalian cells using the human lung cancer cell line A549. These compounds demonstrated significant cytotoxic effects, with IC50 values ranging from 255 to 319 µg/mL. In comparison, the standard antitubercular drug isoniazid exhibited an IC50 value greater than 450 µg/mL, while the anticancer drug cisplatin showed an IC50 value of 9.9 µg/mL. These molecules represent excellent future therapeutic possibilities with potential use in the biological and medical sciences due to the compounds' pronounced docking properties and biological activity.
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Affiliation(s)
- Mater H. Mahnashi
- Department of Pharmaceutical Chemistry, College of Pharmacy, King Khalid University, Abha, Saudi Arabia
| | | | - Ahmed Abdullah Al Awadh
- Department of Clinical Laboratory Sciences, Faculty of Applied Medical Sciences, Najran University, Najran, Saudi Arabia
| | - Ibrahim Abdullah Almazni
- Department of Clinical Laboratory Sciences, Faculty of Applied Medical Sciences, Najran University, Najran, Saudi Arabia
| | - Yahya I. Asiri
- Department of Pharmacology, College of Pharmacy, King Khalid University, Abha, Saudi Arabia
| | - Ibrahim Ahmed Shaikh
- Department of Pharmacology, College of Pharmacy, Najran University, Najran, Saudi Arabia
| | | | - Sravanthi Avunoori
- Novel Drug Design and Discovery Laboratory, Department of Pharmaceutical Chemistry, SET’s College of Pharmacy, Dharwad, Karnataka, India
| | - Aejaz Abdullatif Khan
- Department of General Science, Ibn Sina National College for Medical Studies, Jeddah, Saudi Arabia
| | - Shrinivas D. Joshi
- Novel Drug Design and Discovery Laboratory, Department of Pharmaceutical Chemistry, SET’s College of Pharmacy, Dharwad, Karnataka, India
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Luiz RDSS, Campelo TA, Silva CS, Nogueira LDL, Sancho SDO, da Silva AKA, Frota CC, Carvalho-Costa FA. Single nucleotide polymorphisms in IFN-gamma, TNF-alpha, IL-6, IL-10, and TGF-beta in pulmonary and extrapulmonary tuberculosis in the State of Ceará, northeastern Brazil. Mem Inst Oswaldo Cruz 2025; 120:e240147. [PMID: 40396869 DOI: 10.1590/0074-02760240147] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2024] [Accepted: 12/23/2024] [Indexed: 05/22/2025] Open
Abstract
BACKGROUND Single nucleotide polymorphisms (SNP) in genes encoding cytokines influence tuberculosis (TB) outcomes. OBJECTIVES To characterise genotypes of the SNPs IFN-gamma +874 T > A, TNF-alpha -308 G > A, IL-6 -174 G > C, IL-10 -1082A > G, TGF-beta codon 10 T > C, and TGF-beta codon 25 G > C in patients with pulmonary (PTB) and extrapulmonary TB (EPTB). METHODS 82 PTB and 45 EPTB cases were compared, concerning genotype distribution of the mentioned SNPs, characterised via sequence-specific primer polymerase chain reaction (PCR). FINDINGS Regarding IFN-gamma +874 T > A, AA genotype was the most frequent in both groups, TA was more frequent in PTB and TT in EPTB, with no statistical significance. For SNP TNF-alpha -308 G > A, GG was more frequent in both groups of patients. Regarding the IL-6 -174 G > C polymorphism, GG predominated in both groups, while CG and GG were significantly more frequent in patients with PTB and EPTB, respectively. Concerning IL-10 -1082 A > G, AA predominated in both PTB and EPTB. Concerning TGF-beta codon 10 T > C, CC predominated in PTB while TC predominated in EPTB, but the differences were not statistically significant. Genotype GG of TGF-beta codon 25 G > C predominated among PTB and EPTB patients. MAIN CONCLUSIONS Except for IL-6, the genotype profile could not differentiate PTB and EPTB. Hence, the studied SNPs are not significantly associated with the extrapulmonary involvement of TB.
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Affiliation(s)
- Roberta Dos Santos Silva Luiz
- Universidade Federal do Ceará, Faculdade de Medicina, Laboratório de Micobactérias, Fortaleza, CE, Brasil
- Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Epidemiologia e Sistemática Molecular, Rio de Janeiro, RJ, Brasil
| | - Thales Alves Campelo
- Universidade Federal do Ceará, Faculdade de Medicina, Laboratório de Micobactérias, Fortaleza, CE, Brasil
| | - Caroliny Soares Silva
- Universidade Federal do Ceará, Faculdade de Medicina, Laboratório de Micobactérias, Fortaleza, CE, Brasil
| | - Lucas de Lima Nogueira
- Universidade Federal do Ceará, Faculdade de Medicina, Laboratório de Micobactérias, Fortaleza, CE, Brasil
| | - Soraya de Oliveira Sancho
- Universidade Federal do Ceará, Faculdade de Medicina, Laboratório de Micobactérias, Fortaleza, CE, Brasil
| | | | - Cristiane Cunha Frota
- Universidade Federal do Ceará, Faculdade de Medicina, Laboratório de Micobactérias, Fortaleza, CE, Brasil
| | - Filipe Anibal Carvalho-Costa
- Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Epidemiologia e Sistemática Molecular, Rio de Janeiro, RJ, Brasil
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6
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Wang X, Li A, Wang A, He M, Zeng Y, Li D, Rong R, Liu J. Exosome-Based Vaccines: Pioneering New Frontiers in Combating Infectious Diseases and Cancer. SMALL METHODS 2025:e2402222. [PMID: 40195907 DOI: 10.1002/smtd.202402222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2024] [Revised: 03/27/2025] [Indexed: 04/09/2025]
Abstract
Exosomes, small extracellular vesicles with lipid bilayer membranes, play a crucial role in cellular communication and can transfer diverse biological cargo, including proteins, lipids, and nucleic acids, from donor to recipient cells. Exosomes possess diverse immunological properties, such as antigen delivery and immune activation, along with excellent drug delivery capabilities, making them promising candidates for vaccine development. For different diseases, exosome-based vaccines can be designed as therapeutic or prophylactic vaccines by leveraging cellular immunity or humoral immunity. With the emergence of precision medicine, exosome-based personalized vaccines demonstrate exceptional therapeutic potential. This review systematically introduces the sources, biogenesis mechanisms, and components of exosomes and describes their regulatory roles in the immune system. Subsequently, the preparation, administration, and personalized therapy of exosome-based vaccines are discussed. Finally, the applications and clinical trials of exosome-based vaccines in the fields of anti-infection and anti-tumor therapies are particularly highlighted, with an analysis of the potential challenges in future vaccine development.
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Affiliation(s)
- Xuejun Wang
- College of Pharmacy, Shandong University of Traditional Chinese Medicine, Jinan, 250355, China
- Department of Pharmacy, Fudan University Shanghai Cancer Center, Shanghai, 200032, China
- Department of Oncology, Shanghai Medical College Fudan University, Shanghai, 200032, China
| | - Aixue Li
- College of Pharmacy, Shandong University of Traditional Chinese Medicine, Jinan, 250355, China
| | - Ailing Wang
- College of Pharmacy, Shandong University of Traditional Chinese Medicine, Jinan, 250355, China
| | - Mengyuan He
- College of Pharmacy, Shandong University of Traditional Chinese Medicine, Jinan, 250355, China
| | - Yuanye Zeng
- Department of Pharmacy, Fudan University Shanghai Cancer Center, Shanghai, 200032, China
- Department of Oncology, Shanghai Medical College Fudan University, Shanghai, 200032, China
| | - Dan Li
- Department of Pharmacy, Fudan University Shanghai Cancer Center, Shanghai, 200032, China
- Department of Oncology, Shanghai Medical College Fudan University, Shanghai, 200032, China
| | - Rong Rong
- College of Pharmacy, Shandong University of Traditional Chinese Medicine, Jinan, 250355, China
| | - Jiyong Liu
- College of Pharmacy, Shandong University of Traditional Chinese Medicine, Jinan, 250355, China
- Department of Pharmacy, Fudan University Shanghai Cancer Center, Shanghai, 200032, China
- Department of Oncology, Shanghai Medical College Fudan University, Shanghai, 200032, China
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7
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Wang X, Zhao X, Yang S, He K, Wen Q, Zhang W. Effect of High-Fat Diets on the Pharmacokinetics of Bedaquiline Fumarate Tablet: A Trial in Healthy Chinese Participants. Clin Pharmacol Drug Dev 2025; 14:292-297. [PMID: 39865779 DOI: 10.1002/cpdd.1517] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2024] [Accepted: 01/06/2025] [Indexed: 01/28/2025]
Abstract
Bedaquiline is employed to treat multidrug-resistant and extensive drug-resistant tuberculosis by inhibiting the proton pump of adenosine triphosphate synthase in Mycobacterium tuberculosis. This study aims to investigate the effect of high-fat diets on the pharmacokinetics of bedaquiline through a single-center, open-label, randomized trial in healthy Chinese participants. Bedaquiline fumarate tablets were administered at a dosage of 100 mg under both fasted conditions and high-fat diet conditions. The concentrations were determined using liquid chromatography-tandem mass spectrometry, and the pharmacokinetic parameters were calculated using a noncompartmental model. The high-fat diet group showed a maximum plasma concentration that exceeded that of the fasted group by more than 4-fold and an area under the concentration-time curve from time 0 to the last measurable point that was more than twice as high. Moreover, compared to the fasted group, the high-fat diet group exhibits significantly lower levels of apparent clearance, indicating that the high-fat diet markedly enhances the rate and extent of gastrointestinal absorption of bedaquiline. To optimize drug bioavailability and absorption and ensure safety, the administration of bedaquiline with food is recommended in accordance with clinical usage guidelines and expert consensus.
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Affiliation(s)
- Xuanxuan Wang
- Department of Clinical Research Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, China
| | - Xiaoyu Zhao
- Department of Clinical Research Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, China
| | - Shaomei Yang
- Department of Clinical Research Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, China
| | - Kun He
- Department of Clinical Research Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, China
| | - Qing Wen
- Department of Clinical Research Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, China
| | - Wenyu Zhang
- Department of Clinical Research Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, China
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8
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Jois R, Bajaj R. Infection associated Vasculitides. Best Pract Res Clin Rheumatol 2025:102056. [PMID: 40089428 DOI: 10.1016/j.berh.2025.102056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2025] [Revised: 03/01/2025] [Accepted: 03/04/2025] [Indexed: 03/17/2025]
Abstract
Infections can mimic Primary Systemic Vasculitis. Many clinical features and investigations maybe very similar between the two conditions. It is very important for the clinician to be aware of the various infections which mimic vasculitis, since inadvertent immunosuppression in these patients can be fatal. Infections can mimic small, medium or large vessel vasculitis. Infections can produce autoantibodies such as Anti-neutrophil cytoplasmic antibody through molecular mimicry and could confound clinical judgement. In addition to the many infections causing vasculitis, more recently COVID-19 associated vasculitis has been described. The exact pathogenesis of infection associated vasculitis is not clear although direct spread, immune complex deposition and T/B cell activation are proposed. Infection as an etiological agent for primary systemic vasculitis has long been debated but definite evidence for the same is lacking. Many drugs used in daily clinical practice can rarely cause vasculitis. More recently Immune-check point inhibitors-induced vasculitis has been described.
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Affiliation(s)
- Ramesh Jois
- Department of Clinical Immunology and Rheumatology, Manipal Hospital, Millers Road, Bangalore, India.
| | - Radhika Bajaj
- Department of Clinical Immunology and Rheumatology, Manipal Hospital, Millers Road, Bangalore, India.
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Ibrahim M, Detroja A, Bhimani A, Bhatt TC, Koradiya J, Sanghvi G, Bishoyi AK. In silico discovery of potential novel anti-tuberculosis drug candidates from phytoconstituents of Chlorophytum borivilianum and Asparagus racemosus. Heliyon 2025; 11:e42859. [PMID: 40084025 PMCID: PMC11903821 DOI: 10.1016/j.heliyon.2025.e42859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2025] [Accepted: 02/19/2025] [Indexed: 03/16/2025] Open
Abstract
Tuberculosis (TB), caused by Mycobacterium tuberculosis, remains a significant global health challenge, particularly in developing nations. Side effects and increasing drug resistance often limit conventional pharmaceutical treatments for TB. This has highlighted the urgent need for novel therapeutic agents. Traditional medicine offers a promising avenue for discovering effective and safer alternatives. In silico approaches play a crucial role in pharmaceutical research by facilitating the identification of novel therapeutic compounds. These techniques are widely employed to explore potential treatments for diverse diseases. This study aims to identify lead molecules with anti-tuberculosis potential that could be further studied for their inhibitory potential and possible optimization for the treatment of tuberculosis. Chlorophytum borivilianum and Asparagus racemosus were selected for their diverse phytochemical profiles and proven pharmacological activities, including significant antimicrobial properties that make them promising candidates for in silico exploration of anti-tuberculosis therapeutics. The drug-likeness and pharmacokinetics of phytochemicals from the plants were evaluated using Lipinski's rule of five, and ADMET predictions. Phytochemicals meeting these criteria were subjected to molecular docking against Mycobacterium tuberculosis targets: CYP51, InhA, and EthR, using Vina (PyRx)platform to calculate binding affinities and assess interaction stability. Molecular dynamics simulations (100 ns) were performed to validate the stability of the docked complexes, focusing on key parameters such as RMSD, RMSF, and Rg. This approach identified hecogenin, sarsasapogenin, and isoflavone as potential inhibitors of CYP51 with high binding affinities and stable interactions, suggesting their promise as lead compounds for tuberculosis treatment.
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Affiliation(s)
- Munir Ibrahim
- Department of Microbiology, Faculty of Science, Marwadi University, Rajkot, Gujarat, India
| | - Asmita Detroja
- Department of Microbiology, Faculty of Science, Marwadi University, Rajkot, Gujarat, India
| | - Avani Bhimani
- Department of Microbiology, Faculty of Science, Marwadi University, Rajkot, Gujarat, India
| | | | - Jaykumar Koradiya
- Department of Microbiology, Faculty of Science, Marwadi University, Rajkot, Gujarat, India
| | - Gaurav Sanghvi
- Department of Microbiology, Faculty of Science, Marwadi University, Rajkot, Gujarat, India
| | - Ashok Kumar Bishoyi
- Department of Microbiology, Faculty of Science, Marwadi University, Rajkot, Gujarat, India
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10
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Singh S, Verma P, Gaur M, Bhati L, Madan R, Sharma PP, Rawat A, Rathi B, Singh M. In-silico development of a novel TLR2-mediating multi-epitope vaccine against Mycobacterium tuberculosis. In Silico Pharmacol 2025; 13:34. [PMID: 40018380 PMCID: PMC11861476 DOI: 10.1007/s40203-025-00322-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2024] [Accepted: 02/10/2025] [Indexed: 03/01/2025] Open
Abstract
Tuberculosis (TB), caused by Mycobacterium tuberculosis (Mtb), still remains one of the leading causes of mortality worldwide. The elusive nature of this pathogen and its ability to develop drug resistance makes it a serious threat to global health. BCG, the only preventive vaccine for TB, has a limited efficacy and provides partial protection against the disease. A new effective recombinant vaccine capable of producing a stronger and more comprehensive immune response is required to address this global threat. In the present study, we adopted an in-silico approach to develop a multi-epitope vaccine by screening 198 "regulatory proteins" of Mtb H37Rv strain. Epitopes generated from these proteins were screened on the basis of antigenicity, cytokine profile, allergenicity, toxicity, conservancy and population coverage. Selected epitopes were docked with predominant MHC alleles that were used to develop a vaccine construct using suitable linkers and adjuvant. The construct was subjected to homology modelling, tertiary structure validation and refinement and was eventually docked with Toll-like receptor 2 receptor. Molecular dynamic simulation studies revealed stable interactions between the vaccine construct and TLR-2 receptor. The construct also displayed a high probability to elicit a protective immune response involving both humoral and cell-mediated components. In conclusion, the findings suggest that the constructed vaccine has the potential to induce a robust immune response against Mtb. However, further in-vitro and in-vivo studies are required to assess the safety, efficacy, and long-term protective effects of the vaccine construct. Supplementary Information The online version contains supplementary material available at 10.1007/s40203-025-00322-8.
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Affiliation(s)
- Swati Singh
- Department of Zoology, University of Delhi, Delhi, India
| | - Priyanshu Verma
- Faculty of Biology and Chemistry, University of Bremen, Bremen, Germany
- Hansraj College, University of Delhi, New Delhi, India
| | - Madhav Gaur
- School of Life Sciences, Technical University of Munich, Munich, Germany
- Hansraj College, University of Delhi, New Delhi, India
| | - Lavi Bhati
- Department of Reproductive Biology, All India Institute for Medical Sciences, New Delhi, India
- Hansraj College, University of Delhi, New Delhi, India
| | - Riya Madan
- Department of Biological Sciences, Indian Institute of Science Education and Research, Mohali, India
- Hansraj College, University of Delhi, New Delhi, India
| | - Prem P. Sharma
- Hansraj College, University of Delhi, New Delhi, India
- HeteroChem InnoTech, New Delhi, Delhi India
| | - Ayushi Rawat
- Hansraj College, University of Delhi, New Delhi, India
| | - Brijesh Rathi
- H.G. Khorana Centre for Chemical Biology, Department of Chemistry, Hansraj College, University of Delhi, New Delhi, India
| | - Medha Singh
- Centre for Tuberculosis Research, School of Medicine, Johns Hopkins University, Baltimore, MD USA
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11
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Ceccato J, Gualtiero G, Piazza M, Carraro S, Buso H, Felice C, Rattazzi M, Scarpa R, Vianello F, Cinetto F. Shaping Rare Granulomatous Diseases in the Lab: How New Models Are Changing the Game. Cells 2025; 14:293. [PMID: 39996765 PMCID: PMC11853845 DOI: 10.3390/cells14040293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2025] [Revised: 02/10/2025] [Accepted: 02/10/2025] [Indexed: 02/26/2025] Open
Abstract
In vitro models serve as valuable tools for understanding the complex cellular and molecular interactions involved in granuloma formation, providing a controlled environment to explore the underlying mechanisms of their development and function. Various models have been developed to replicate granulomatous diseases, even though they may lack the sophistication needed to fully capture the variability present in clinical spectra and environmental influences. Traditional cultures of PBMCs have been widely used to generate granuloma models, enabling the study of aggregation responses to various stimuli. However, growing cells on a two-dimensional (2D) plastic surface as a monolayer can lead to altered cellular responses and the modulation of signaling pathways, which may not accurately represent in vivo conditions. In response to these limitations, the past decade has seen significant advancements in the development of three-dimensional (3D) in vitro models, which more effectively mimic in vivo conditions and provide better insights into cell-cell and cell-microenvironment interactions. Meanwhile, the use of in vivo animal models in biomedical research must adhere to the principle of the three Rs (replacement, reduction, and refinement) while ensuring that the models faithfully replicate human-specific processes. This review summarizes and compares the main models developed to investigate granulomas, focusing on their contribution to advancing our understanding of granuloma biology. We also discuss the strengths and limitations of each model, offering insights into their biological relevance and practical applications.
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Affiliation(s)
- Jessica Ceccato
- Hematology and Clinical Immunology Unit, Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (J.C.); (G.G.)
- Veneto Institute of Molecular Medicine (VIMM), 35128 Padua, Italy
| | - Giulia Gualtiero
- Hematology and Clinical Immunology Unit, Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (J.C.); (G.G.)
- Veneto Institute of Molecular Medicine (VIMM), 35128 Padua, Italy
| | - Maria Piazza
- Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (M.P.); (H.B.); (C.F.); (M.R.); (R.S.); (F.C.)
| | - Samuela Carraro
- Rare Diseases Referral Center, Internal Medicine 1, Ca’ Foncello Hospital, AULSS2 Marca Trevigiana, 31100 Treviso, Italy;
| | - Helena Buso
- Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (M.P.); (H.B.); (C.F.); (M.R.); (R.S.); (F.C.)
- Rare Diseases Referral Center, Internal Medicine 1, Ca’ Foncello Hospital, AULSS2 Marca Trevigiana, 31100 Treviso, Italy;
| | - Carla Felice
- Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (M.P.); (H.B.); (C.F.); (M.R.); (R.S.); (F.C.)
- Rare Diseases Referral Center, Internal Medicine 1, Ca’ Foncello Hospital, AULSS2 Marca Trevigiana, 31100 Treviso, Italy;
| | - Marcello Rattazzi
- Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (M.P.); (H.B.); (C.F.); (M.R.); (R.S.); (F.C.)
- Rare Diseases Referral Center, Internal Medicine 1, Ca’ Foncello Hospital, AULSS2 Marca Trevigiana, 31100 Treviso, Italy;
| | - Riccardo Scarpa
- Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (M.P.); (H.B.); (C.F.); (M.R.); (R.S.); (F.C.)
- Rare Diseases Referral Center, Internal Medicine 1, Ca’ Foncello Hospital, AULSS2 Marca Trevigiana, 31100 Treviso, Italy;
| | - Fabrizio Vianello
- Hematology and Clinical Immunology Unit, Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (J.C.); (G.G.)
- Veneto Institute of Molecular Medicine (VIMM), 35128 Padua, Italy
| | - Francesco Cinetto
- Department of Medicine (DIMED), University of Padua, 35128 Padua, Italy; (M.P.); (H.B.); (C.F.); (M.R.); (R.S.); (F.C.)
- Rare Diseases Referral Center, Internal Medicine 1, Ca’ Foncello Hospital, AULSS2 Marca Trevigiana, 31100 Treviso, Italy;
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Kumar S, Rayal S, Bommaraju R, Varasala NP, Papineni S, Deo S. Understanding Providers' Attitude Toward AI in India's Informal Health Care Sector: Survey Study. JMIR Form Res 2025; 9:e54156. [PMID: 39930587 PMCID: PMC11832356 DOI: 10.2196/54156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 11/18/2024] [Accepted: 11/18/2024] [Indexed: 02/20/2025] Open
Abstract
Background Tuberculosis (TB) is a major global health concern, causing 1.5 million deaths in 2020. Diagnostic tests for TB are often inaccurate, expensive, and inaccessible, making chest x-rays augmented with artificial intelligence (AI) a promising solution. However, whether providers are willing to adopt AI is not apparent. Objective The study seeks to understand the attitude of Ayurveda, Yoga and Naturopathy, Unani, Siddha, and Homoeopathy (AYUSH) and informal health care providers, who we jointly call AIPs, toward adopting AI for TB diagnosis. We chose to study these providers as they are the first point of contact for a majority of TB patients in India. Methods We conducted a cross-sectional survey of 406 AIPs across the states of Jharkhand (162 participants) and Gujarat (244 participants) in India. We designed the survey questionnaire to assess the AIPs' confidence in treating presumptive TB patients, their trust in local radiologists' reading of the chest x-ray images, their beliefs regarding the diagnostic capabilities of AI, and their willingness to adopt AI for TB diagnosis. Results We found that 93.7% (270/288) of AIPs believed that AI could improve the accuracy of TB diagnosis, and for those who believed in AI, 71.9% (194/270) were willing to try AI. Among all AIPs, 69.4% (200/288) were willing to try AI. However, we found significant differences in AIPs' willingness to try AI across the 2 states. Specifically, in Gujarat, a state with better and more accessible health care infrastructure, 73.4% (155/211) were willing to try AI, and in Jharkhand, 58.4% (45/77) were willing to try AI. Moreover, AIPs in Gujarat who showed higher trust in the local radiologists were less likely to try AI (odds ratio [OR] 0.15, 95% CI 0.03-0.69; P=.02). In contrast, in Jharkhand, those who showed higher trust in the local radiologists were more likely to try AI (OR 2.11, 95% CI 0.9-4.93; P=.09). Conclusions While most AIPs believed in the potential benefits of AI-based TB diagnoses, many did not intend to try AI, indicating that the expected benefits of AI measured in terms of technological superiority may not directly translate to impact on the ground. Improving beliefs among AIPs with poor access to radiology services or those who are less confident of diagnosing TB is likely to result in a greater impact of AI on the ground. Additionally, tailored interventions addressing regional and infrastructural differences may facilitate AI adoption in India's informal health care sector.
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Affiliation(s)
- Sumeet Kumar
- Indian School of Business, Gachibowli, ISB Road, Hyderabad, India, +91 7075969318
| | - Snehil Rayal
- Indian School of Business, Gachibowli, ISB Road, Hyderabad, India, +91 7075969318
| | - Raghuram Bommaraju
- Indian School of Business, Gachibowli, ISB Road, Hyderabad, India, +91 7075969318
| | | | - Sirisha Papineni
- Indian School of Business, Gachibowli, ISB Road, Hyderabad, India, +91 7075969318
| | - Sarang Deo
- Indian School of Business, Gachibowli, ISB Road, Hyderabad, India, +91 7075969318
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Celik M, Gurbuz E, Cicek Y, Buyuktuna SA, Gundag O, Gulderen Kuscu E, Mermutluoglu C, Alkan S, Yuruk Atasoy P, Yuksekkaya E, Sahinoglu MS, Sahin A, Parlak E, Akgul F, Dindar Demiray EK, Oz M, Ciftci EZ, Kirik Y, Arslan Y, Ceylan MR, Mert A. Demographic, clinical and laboratory characteristics of extrapulmonary tuberculosis: Eight-year results of a multicenter retrospective study in Turkey. J Investig Med 2025; 73:206-217. [PMID: 39508290 DOI: 10.1177/10815589241299367] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2024]
Abstract
Extrapulmonary tuberculosis (EPTB) is an important public health problem due to its diverse clinical presentations, diagnostic complexities, and significant impact on patient outcomes and public health. Our study aimed to understand the sociodemographic, clinical, and laboratory characteristics as well as diagnostic and treatment modalities of adult patients with EPTB. This is a multicentric retrospective study that covers patients with EPTB cases followed up from January 2015 to December 2022 among tuberculosis (TB) dispensaries and Infectious Diseases and Clinical Microbiology clinics of 15 hospitals located in various regions of Turkey. The study included 64.6% women with a mean age of 44 years and a mortality rate of 3.5% within 1 year of diagnosis. Initial constitutional symptoms were predominantly fatigue (57%) and anorexia (53.7%). The most commonly affected sites were the lymph nodes (49.1%) and pleura (9.7%). The lumbar region was particularly involved in cases with spinal TB. Diagnostic findings included acid-fast bacilli positivity in 27.5% of cases, tuberculosis polymerase chain reaction positivity in 41%, elevated adenosine deaminase levels in 91.2% (especially in pleural and peritoneal fluids), and mycobacterial culture positivity in 40.9%. Pathology slides showed granulomatous inflammation in 97.7%. Increased C-reactive protein (CRP) levels correlated with the number of organs affected. Anti-TB treatment-related hepatotoxicity was detected in 8.9% of patients. In this study, it is important to note that the lumbar region is predominantly affected with involvement in spinal region. CRP level was consistent with the number of organ involvements and was one of the most critical results of this study.
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Affiliation(s)
- Mehmet Celik
- Department of Infectious Diseases and Clinical Microbiology, University of Harran Faculty of Medicine, Sanliurfa, Turkey
| | - Esra Gurbuz
- Department of Infectious Diseases and Clinical Microbiology, SBU Van Training and Research Hospital, Van, Turkey
| | - Yeliz Cicek
- Department of Infectious Diseases and Clinical Microbiology, Bingol State Hospital, Bingol, Turkey
| | - Seyit Ali Buyuktuna
- Department of Infectious Diseases and Clinical Microbiology, Sivas Cumhuriyet University, Sivas, Turkey
| | - Omur Gundag
- Department of Infectious Diseases and Clinical Microbiology, Elazığ Fethi Sekin City Hospital, Elazıg, Turkey
| | - Evrim Gulderen Kuscu
- Department of Infectious Disease and Clinical Microbiology, Faculty of Medicine, Kahramanmaras Sütcü Imam University, Kahramanmaras, Turkey
| | - Cigdem Mermutluoglu
- Department of Infectious Disease and Clinical Microbiology, Faculty of Medicine, Dicle University, Diyarbakir, Turkey
| | - Sevil Alkan
- Department of Infectious Diseases and Clinical Microbiology, Canakkale Onsekiz Mart University Faculty of Medicine, Canakkale, Turkey
| | - Pınar Yuruk Atasoy
- Department of Infectious Diseases and Clinical Microbiology, Ankara City Hospital, Ankara, Turkey
| | - Esra Yuksekkaya
- Department of Infectious Diseases and Clinical Microbiology, Mehmet Akif İnan Training and Research Hospital, Sanliurfa, Turkey
| | - Mustafa Serhat Sahinoglu
- Department of Infectious Diseases and Clinical Microbiology, Manisa City Hospital, Manisa, Turkey
| | - Ahmet Sahin
- Department of Infectious Diseases and Clinical Microbiology, Dr. Ersin Arslan Training and Research Hospital, Gaziantep, Turkey
| | - Emine Parlak
- Department of Infectious Diseases and Clinical Microbiology, Erzurum Ataturk University, Erzurum, Turkey
| | - Fethiye Akgul
- Department of Infectious Diseases and Clinical Microbiology, Batman Training and Research Hospital, Batman, Turkey
| | | | - Murtaza Oz
- Department of Infectious Diseases and Clinical Microbiology, Sivas Numune Hospital, Sivas, Turkey
| | - Elif Zelal Ciftci
- Department of Infectious Diseases and Clinical Microbiology, Diyarbakir Dagkapi State Hospital, Diyarbakir, Turkey
| | - Yasemin Kirik
- Department of Infectious Diseases and Clinical Microbiology, Elazıg Fethi Sekin City Hospital, Elazıg, Turkey
| | - Yusuf Arslan
- Department of Infectious Diseases and Clinical Microbiology, Batman Training and Research Hospital, Batman, Turkey
| | - Mehmet Resat Ceylan
- Department of Infectious Diseases and Clinical Microbiology, University of Harran Faculty of Medicine, Sanliurfa, Turkey
| | - Ali Mert
- Department of Infectious Diseases and Clinical Microbiology, University of Medipol, Faculty of Medicine, Istanbul, Turkey
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Shaikh M, Patel H. Structural toxicity relationship (STR) of linezolid to mitigate myelosuppression and serotonergic toxicity. Bioorg Med Chem 2025; 118:118025. [PMID: 39631241 DOI: 10.1016/j.bmc.2024.118025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2024] [Revised: 11/21/2024] [Accepted: 11/25/2024] [Indexed: 12/07/2024]
Abstract
Tuberculosis (TB) remains a significant global health challenge, with multidrug-resistant (MDR-TB) and extensively drug-resistant (XDR-TB) strains posing severe threats to treatment efficacy. Linezolid, a key component of the BPaL (Bedaquiline, Pretomanid and Linezolid) regimen, has demonstrated substantial efficacy against MDR-TB and XDR-TB. However, its clinical utility is often limited by side effects such as myelosuppression and monoamine oxidase (MAO) inhibition, linked to its mechanism of action. This perspective centres on the structural toxicity relationship (STR) of Linezolid and its analogues, exploring modifications to the C-ring and C-5 position that aim to reduce these toxicities while maintaining or enhancing antibacterial activity. Several promising analogues have been identified that exhibit reduced myelosuppression and MAO inhibition, highlighting the potential for developing safer Linezolid derivatives. The findings underscore the importance of continued research into the structure toxicity relationships of oxazolidinones to improve the therapeutic profiles of these essential drugs in combating drug-resistant TB.
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Affiliation(s)
- Matin Shaikh
- Division of Computer Aided Drug Design, Department of Pharmaceutical Chemistry, R. C. Patel Institute of Pharmaceutical Education and Research, Shirpur, Dhule 425405, Maharashtra, India; Department of Pharmaceutical Chemistry, H. R. Patel Institute of Pharmaceutical Education and Research, Shirpur, Dhule 425405, Maharashtra, India.
| | - Harun Patel
- Division of Computer Aided Drug Design, Department of Pharmaceutical Chemistry, R. C. Patel Institute of Pharmaceutical Education and Research, Shirpur, Dhule 425405, Maharashtra, India.
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Singh A, Singh A, Saraswati SSK, Rana AK, Singh A, Verma C, Sinha V, Kalra K, Natarajan K. Suppressive effects of toll-like receptor 2, toll-like receptor 4, and toll-like receptor 7 on protective responses to Mycobacterium bovis BCG from epithelial cells. Microbes Infect 2025; 27:105428. [PMID: 39368609 DOI: 10.1016/j.micinf.2024.105428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 09/24/2024] [Accepted: 09/26/2024] [Indexed: 10/07/2024]
Abstract
Mycobacteria have several mechanisms for evasion of protective responses mounted by the host. In this study, we unravel yet another mechanism that is mediated by Toll-Like Receptors TLR2, TLR4, and TLR7 in epithelial cells. We show that mycobacterial infection of epithelial cells increases the expression of TLR2, TLR4, and TLR7. Stimulation of either TLR along with mycobacterial infection results in an inhibition of oxidative burst resulting in increased survival of mycobacteria inside epithelial cells. TLR stimulation along with mycobacterial infection also inhibits activation of epithelial cells for T cell responses by differentially regulating the activation of ERK-MAPK and p38-MAPK along with inhibition of co-stimulatory molecule CD86 expression. Furthermore, stimulation of either TLR inhibits the induction of apoptosis and autophagy. Knockdown of either TLR by specific siRNAs reverses the inhibition by ROS and apoptosis by mycobacteria and results in reduced intracellular survival of mycobacteria in a MyD88-dependent manner. These results point towards a negative role for TLR2, TLR4, and TLR7 in regulating protective responses to M. bovis BCG infection in epithelial cells.
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Affiliation(s)
- Aarti Singh
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India.
| | - Akshita Singh
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India
| | | | - Ankush Kumar Rana
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India
| | - Aayushi Singh
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India
| | - Chaitenya Verma
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India
| | - Vishal Sinha
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India
| | - Kanika Kalra
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India
| | - Krishnamurthy Natarajan
- Infectious Disease Immunology Laboratory, Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India.
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Yang X, Chen Y, Pu B, Yuan X, Wang J, Chen C. YY1 Contributes to the Inflammatory Responses of Mycobacterium tuberculosis-Infected Macrophages Through Transcription Activation-Mediated Upregulation TLR4. Mol Biotechnol 2025; 67:778-789. [PMID: 38492118 DOI: 10.1007/s12033-024-01093-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Accepted: 01/26/2024] [Indexed: 03/18/2024]
Abstract
Tuberculosis (TB) is a chronic respiratory infectious disease and is induced by Mycobacterium tuberculosis (M.tb) infection. Macrophages serve as the cellular home in immunoreaction against M.tb infection, which is tightly regulated through Toll-like receptor 4 (TLR4) expression. Therefore, this study is designed to explore the role and mechanism of TLR4 in mycobacterial injury in human macrophages (THP-1 cells) after M.tb infection. Cell proliferation and apoptosis were assessed using MTT, EdU, and flow cytometry assays. ELISA kits were utilized to assess the levels of Interleukin-6 (IL-6), IL-1β, and tumor necrosis factor α (TNF-α). The binding between Yin-Yang-1 (YY1) and TLR4 promoter was predicted by JASPAR and verified using Chromatin immunoprecipitation (ChIP) and dual-luciferase reporter assays. M.tb infection might repress THP-1 cell proliferation, and induce cell apoptosis and inflammatory response in a multiplicity of infection (MOI)-dependent manner. Moreover, M.tb infection increased the expression of TLR4 in HTP-1 cells in an MOI-dependent way, and its downregulation might overturn M.tb infection-mediated HTP-1 cell damage and inflammatory response. At the molecular level, YY1 was a transcription factor of TLR4 and promoted TLR4 transcription via binding to its promoter region. Besides, YY1 might activate the NF-kB signaling pathway via regulating TLR4. Meanwhile, TLR4 inhibitor BAY11-7082 might overturn the repression effect of TLR4 on M.tb-infected HTP-1 cell damage. YY1-activated TLR4 might aggravate mycobacterial injury in human macrophages after M.tb infection by the NF-kB pathway, providing a promising therapeutic target for TB treatment.
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Affiliation(s)
- Xing Yang
- Department of Preventive Health Care, Ren Huai People's Hospital, 2802, Building 3, Shengjie Community Harmony Square, Luban Street, Renhuai, Zunyi, Guizhou, China.
| | - Yu Chen
- Department of Health Management Division, Ren Huai People's Hospital, Zunyi, 564500, Guizhou, China
| | - Bingshuang Pu
- Department of Infectious Diseases, Ren Huai People's Hospital, Zunyi, 564500, Guizhou, China
| | - Xuan Yuan
- Department of Preventive Health Care, Ren Huai People's Hospital, 2802, Building 3, Shengjie Community Harmony Square, Luban Street, Renhuai, Zunyi, Guizhou, China
| | - Jiaojiao Wang
- Department of Preventive Health Care, Ren Huai People's Hospital, 2802, Building 3, Shengjie Community Harmony Square, Luban Street, Renhuai, Zunyi, Guizhou, China
| | - Chun Chen
- Department of Preventive Health Care, Ren Huai People's Hospital, 2802, Building 3, Shengjie Community Harmony Square, Luban Street, Renhuai, Zunyi, Guizhou, China
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Perveen S, Pal S, Sharma R. Breaking the energy chain: importance of ATP synthase in Mycobacterium tuberculosis and its potential as a drug target. RSC Med Chem 2025:d4md00829d. [PMID: 39790127 PMCID: PMC11707528 DOI: 10.1039/d4md00829d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2024] [Accepted: 12/13/2024] [Indexed: 01/12/2025] Open
Abstract
Unveiling novel pathways for drug discovery forms the foundation of a new era in the combat against tuberculosis. The discovery of a novel drug, bedaquiline, targeting mycobacterial ATP synthase highlighted the targetability of the energy metabolism pathway. The significant potency of bedaquiline against heterogeneous population of Mycobacterium tuberculosis marks ATP synthase as an important complex of the electron transport chain. This review focuses on the importance and unique characteristics of mycobacterial ATP synthase. Understanding these distinctions enables the targeting of ATP synthase subunits for drug discovery, without aiming at the mammalian counterpart. Furthermore, a brief comparison of the structural differences between mycobacterial and mitochondrial ATP synthase is discussed. Being a complex multi-subunit protein, ATP synthase offers multiple sites for potential inhibitors, including the a, c, ε, γ, and δ subunits. Inhibitors targeting these subunits are critically reviewed, providing insight into the design of better and more potent chemical entities with the potential for effective treatment regimens.
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Affiliation(s)
- Summaya Perveen
- Infectious Diseases Division, CSIR - Indian Institute of Integrative Medicine Jammu-180001 India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad-201002 India
| | - Sunny Pal
- Infectious Diseases Division, CSIR - Indian Institute of Integrative Medicine Jammu-180001 India
| | - Rashmi Sharma
- Infectious Diseases Division, CSIR - Indian Institute of Integrative Medicine Jammu-180001 India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad-201002 India
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Hu YQ, Liu K, Lai LQ, He YR, Hong LP, Jiang CQ, Liu SM, Cao MZ. Evaluation of the diagnostic efficiency of fluorescence in situ hybridization for pulmonary tuberculosis: a systematic review and meta-analysis. Front Med (Lausanne) 2025; 11:1467530. [PMID: 39835097 PMCID: PMC11742950 DOI: 10.3389/fmed.2024.1467530] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2024] [Accepted: 11/25/2024] [Indexed: 01/22/2025] Open
Abstract
Objective In clinical practice, an accurate and efficient detection approach for pulmonary tuberculosis (PTB) is highly needed. The fluorescence in situ hybridization (FISH) assay for PTB might be a suitable alternative to current tests. However, a systematic assessment of the diagnostic performance of this new approach is not available. Our study aimed to determine the diagnostic accuracy of FISH for PTB. Methods We examined PubMed and three more databases including Embase, Cochrane Library, and Web of Science databases from their establishment to November 10, 2023, for published articles on the diagnostic performance of FISH on individuals with clinical suspicion of tuberculosis (TB). QUADAS-2 was used to evaluate the literature's quality. We used Meta-DiSc software to create forest plots. Results The search yielded 7 studies, involving 1,224 sputum samples that could be included in our meta-analysis. The combined FISH sensitivity and specificity were 0.89 (95% CI 0.86-0.92) and 0.98 (95% CI 0.97-0.99), respectively. Furthermore, subgroup analysis was performed based on probes and PTB incidence. Conclusion FISH may be useful in the diagnosis of pulmonary tuberculosis. The sensitivity and specificity of FISH are high for most sputum specimens. Additionally, FISH has better diagnostic performance in countries with low PTB prevalence than in high PTB prevalence countries. We hope this study will find a new and effective tool for the early diagnosis of PTB.
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Affiliation(s)
- Yu-Qi Hu
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
- Department of Clinical Medicine, The Third Clinical School of Guangzhou Medical University, Guangzhou, China
| | - Kang Liu
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
- Department of Clinical Medicine, The Second Clinical School of Guangzhou Medical University, Guangzhou, China
| | - Le-Qing Lai
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
- Department of Clinical Medicine, The Third Clinical School of Guangzhou Medical University, Guangzhou, China
| | - Yi-Ru He
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
- Department of Clinical Medicine, The Third Clinical School of Guangzhou Medical University, Guangzhou, China
| | - Li-Ping Hong
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
- Department of Clinical Medicine, The Third Clinical School of Guangzhou Medical University, Guangzhou, China
| | - Chu-Qian Jiang
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
- Department of Clinical Medicine, The Third Clinical School of Guangzhou Medical University, Guangzhou, China
| | - Si-Min Liu
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
- Department of Clinical Medicine, The Third Clinical School of Guangzhou Medical University, Guangzhou, China
| | - Ming-Zhu Cao
- Department of Obstetrics and Gynecology, Center for Reproductive Medicine, Guangdong Provincial Key Laboratory of Major Obstetric Diseases, Guangdong Provincial Clinical Research Center for Obstetrics and Gynecology, Guangdong-Hong Kong-Macao Greater Bay Area Higher Education Joint Laboratory of Maternal-Fetal Medicine, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China
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Ghasemi F, Poorolajal J, Khazaei S, Zahiri A, Torkaman Asadi F. Changes in The Trends of Tuberculosis-related Indicators in Hamadan Province Using the Join Point Regression Approach From 2011 to 2022. J Res Health Sci 2025; 25:e00641. [PMID: 39996350 PMCID: PMC11833495 DOI: 10.34172/jrhs.2025.176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2024] [Revised: 08/04/2024] [Accepted: 08/28/2024] [Indexed: 02/26/2025] Open
Abstract
BACKGROUND This study was conducted to investigate the trend of some tuberculosis (TB) indices and identify existing gaps in addressing this important public health issue in Hamadan province over a long time period. Study Design: A registry-based cross-sectional study. METHODS In this study, we examined the trend of 10 TB indicators separately in males and females, including the incidence rates of smear-positive pulmonary TB (SPPT), extra-pulmonary TB (EPT), and smear-negative pulmonary TB (SNPT), co-infection with AIDS, relapse rate, smear conversion rate two months after treatment initiation, TB mortality rate, diagnosis rate of pulmonary TB with a smear grade of 3+, treatment success rate, and TB diagnosis rate by the private sector in Hamadan province during 2011-2022. The trend analysis of TB was conducted using Joinpoint regression model, and the annual percentage change (APC) and the average annual percentage change (AAPC) were calculated. RESULTS A total of 481 females and 554 males were eligible for analysis. The incidence of SPPT in females showed a decreasing trend (AAPC: -7.72; 95% CI: -15.63, -1.10; P=0.008). The rates of EPT and treatment success showed a significant downward trend in both genders. In contrast, the recurrence rate among females exhibited a notable upward trend during the specified time period (AAPC: 18.45; 95% CI: 3.23, 46.47; P=0.0002). CONCLUSION The findings of this study suggest that the epidemiological profile of TB has exhibited a relatively favorable trend in some of the examined indicators since 2011, with declines observed in both SPPT and EPT.
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Affiliation(s)
- Faezeh Ghasemi
- Department of Epidemiology, School of Public Health, Hamadan University of Medical Sciences, Hamadan, Iran
- Student Research Committee, Hamadan University of Medical Sciences, Hamadan, Iran
| | - Jalal Poorolajal
- Department of Epidemiology, School of Public Health, Hamadan University of Medical Sciences, Hamadan, Iran
- Modeling of Noncommunicable Diseases Research Center, Hamadan University of Medical Sciences, Hamadan, Iran
| | - Salman Khazaei
- Department of Epidemiology, School of Public Health, Hamadan University of Medical Sciences, Hamadan, Iran
- Research Center for Health Sciences, Hamadan University of Medical Sciences, Hamadan, Iran
| | - Ali Zahiri
- Deputy of Health, Hamadan University of Medical Sciences, Hamadan, Iran
| | - Fatemeh Torkaman Asadi
- Infectious Disease Research Center, Hamadan University of Medical Sciences, Hamadan, Iran
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Souza IV, Fróes da Motta Dacome ML, Frederico Rozada AM, Rosa JS, Sampiron EG, Ferreira DG, Gauze GF, Norman Negri MF, de Lima Scodro RB, Cardoso RF, Caleffi-Ferracioli KR. A new N-acylhydrazone oxadiazole derivative with activity against mycobacteria. Future Microbiol 2025; 20:33-44. [PMID: 39440547 PMCID: PMC11974343 DOI: 10.1080/17460913.2024.2412439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2024] [Accepted: 10/01/2024] [Indexed: 10/25/2024] Open
Abstract
Aim: To evaluate the anti-Mycobacterium tuberculosis (Mtb) potential of the hybrid oxadiazol-4-methoxynaphthalene (6n) derived from N-acylhydrazone (4k).Materials & methods: The study determined the minimal inhibitory concentration of (6n) against Mtb H37Rv and Mtb clinical isolates, potential combination of (6n) with anti-tuberculosis drugs and carried out time kill curve assay of Mtb H37Rv. Additional contribution for the analysis of (6n) was explored by in silico pharmacokinetics, and in vitro and in vivo cytotoxicity determinations.Results: The newly synthesized molecule (6n) demonstrated anti-Mtb activity, low cytotoxicity and selectivity for Mtb.Conclusion: The derivative (6n) emerges as a potential anti-TB drug candidate.
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Affiliation(s)
- Izabella Ventura Souza
- Postgraduate Program of Biosciences and Physiopathology, Department of Clinical Analysis and Biomedicine, State University of Maringa, Maringa, Parana, Brazil
| | - Maria Luiza Fróes da Motta Dacome
- Postgraduate Program of Biosciences and Physiopathology, Department of Clinical Analysis and Biomedicine, State University of Maringa, Maringa, Parana, Brazil
| | | | - Jonathan Sanches Rosa
- Postgraduate Program of Biosciences and Physiopathology, Department of Clinical Analysis and Biomedicine, State University of Maringa, Maringa, Parana, Brazil
| | - Eloisa Gibin Sampiron
- Postgraduate Program in Health Sciences, State University of Maringa, Maringa, Parana, Brazil
| | - Deisiany Gomes Ferreira
- Postgraduate Program in Health Sciences, State University of Maringa, Maringa, Parana, Brazil
| | | | | | | | - Rosilene Fressatti Cardoso
- Postgraduate Program of Biosciences and Physiopathology, Department of Clinical Analysis and Biomedicine, State University of Maringa, Maringa, Parana, Brazil
- Postgraduate Program in Health Sciences, State University of Maringa, Maringa, Parana, Brazil
| | - Katiany Rizzieri Caleffi-Ferracioli
- Postgraduate Program of Biosciences and Physiopathology, Department of Clinical Analysis and Biomedicine, State University of Maringa, Maringa, Parana, Brazil
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21
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Khlebnikova A, Kirshina A, Zakharova N, Ivanov R, Reshetnikov V. Current Progress in the Development of mRNA Vaccines Against Bacterial Infections. Int J Mol Sci 2024; 25:13139. [PMID: 39684849 DOI: 10.3390/ijms252313139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2024] [Revised: 12/03/2024] [Accepted: 12/04/2024] [Indexed: 12/18/2024] Open
Abstract
Bacterial infections have accompanied humanity for centuries. The discovery of the first antibiotics and the subsequent golden era of their discovery temporarily shifted the balance in this confrontation to the side of humans. Nevertheless, the excessive and improper use of antibacterial drugs and the evolution of bacteria has gotten the better of humans again. Therefore, today, the search for new antibacterial drugs or the development of alternative approaches to the prevention and treatment of bacterial infections is relevant and topical again. Vaccination is one of the most effective strategies for the prevention of bacterial infections. The success of new-generation vaccines, such as mRNA vaccines, in the fight against viral infections has prompted many researchers to design mRNA vaccines against bacterial infections. Nevertheless, the biology of bacteria and their interactions with the host's immunity are much more complex compared to viruses. In this review, we discuss structural features and key mechanisms of evasion of an immune response for nine species of bacterial pathogens against which mRNA vaccines have been developed and tested in animals. We focus on the results of experiments involving the application of mRNA vaccines against various bacterial pathogens in animal models and discuss possible options for improving the vaccines' effectiveness. This is one of the first comprehensive reviews of the use of mRNA vaccines against bacterial infections in vivo to improve our knowledge.
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Affiliation(s)
- Alina Khlebnikova
- Translational Medicine Research Center, Sirius University of Science and Technology, Sochi 354340, Russia
| | - Anna Kirshina
- Translational Medicine Research Center, Sirius University of Science and Technology, Sochi 354340, Russia
| | - Natalia Zakharova
- Translational Medicine Research Center, Sirius University of Science and Technology, Sochi 354340, Russia
| | - Roman Ivanov
- Translational Medicine Research Center, Sirius University of Science and Technology, Sochi 354340, Russia
| | - Vasiliy Reshetnikov
- Translational Medicine Research Center, Sirius University of Science and Technology, Sochi 354340, Russia
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22
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Faye LM, Hosu MC, Apalata T. Drug-Resistant Tuberculosis Hotspots in Oliver Reginald Tambo District Municipality, Eastern Cape, South Africa. Infect Dis Rep 2024; 16:1197-1213. [PMID: 39728017 DOI: 10.3390/idr16060095] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/19/2024] [Revised: 11/21/2024] [Accepted: 12/02/2024] [Indexed: 12/28/2024] Open
Abstract
BACKGROUND The global push to eliminate tuberculosis (TB) as a public health threat is increasingly urgent, particularly in high-burden areas like the Oliver Reginald Tambo District Municipality, South Africa. Drug-resistant TB (DR-TB) poses a significant challenge to TB control efforts and is a leading cause of TB-related deaths. This study aimed to assess DR-TB transmission patterns and predict future cases using geospatial and predictive modeling techniques. METHODS A retrospective cross-sectional study was conducted across five decentralized DR-TB facilities in the O.R. Tambo District Municipality from January 2018 to December 2020. Data were obtained from Statistics South Africa, and patient GPS coordinates were used to identify clusters of DR-TB cases via DBSCAN clustering. Hotspot analysis (Getis-Ord Gi) was performed, and two predictive models (Linear Regression and Random Forest) were developed to estimate future DR-TB cases. Analyses were conducted using Python 3.8 and R 4.1.1, with significance set at p < 0.05. RESULTS A total of 456 patients with DR-TB were enrolled, with 56.1% males and 43.9% females. The mean age was 37.5 (±14.9) years. The incidence of DR-TB was 11.89 cases per 100,000 population, with males being disproportionately affected. Key risk factors included poverty, lack of education, and occupational exposure. The DR-TB types included RR-TB (60%), MDR-TB (30%), Pre-XDR-TB (5%), XDR-TB (3%), and INHR-TB (2%). Spatial analysis revealed significant clustering in socio-economically disadvantaged areas. A major cluster was identified, along with a distinct outlier. The analyses of DR-TB case trends using historical data (2018-2021) and projections (2022-2026) from Linear Regression and Random Forest models reveal historical data with a sharp decline in DR-TB case, from 186 in 2018 to 15 in 2021, highlighting substantial progress. The Linear Regression model predicts a continued decline to zero cases by 2026, with an R2 = 0.865, a mean squared error (MSE) of 507.175, and a mean absolute error (MAE) of 18.65. Conversely, the Random Forest model forecasts stabilization to around 30-50 cases annually after 2021, achieving an R2 = 0.882, an MSE of 443.226, and an MAE of 19.03. These models underscore the importance of adaptive strategies to sustain progress and avoid plateauing in DR-TB reduction efforts. CONCLUSIONS This study highlights the need for targeted interventions in vulnerable populations to curb DR-TB transmission and improve treatment outcomes.
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Affiliation(s)
- Lindiwe Modest Faye
- Department of Laboratory Medicine and Pathology, Walter Sisulu University, Private Bag X5117, Mthatha 5099, South Africa
| | - Mojisola Clara Hosu
- Department of Laboratory Medicine and Pathology, Walter Sisulu University, Private Bag X5117, Mthatha 5099, South Africa
| | - Teke Apalata
- Department of Laboratory Medicine and Pathology, Walter Sisulu University, Private Bag X5117, Mthatha 5099, South Africa
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Saffar H, Sobhanian P, Alian S, Darvishnia D, Baradaran M. The Long-Term Journey of a Tuberculosis Patient With Triple Organ Involvement and Rheumatological Disease: A Case Study and Literature Review. Clin Case Rep 2024; 12:e9614. [PMID: 39677867 PMCID: PMC11638356 DOI: 10.1002/ccr3.9614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2024] [Revised: 09/28/2024] [Accepted: 10/25/2024] [Indexed: 12/17/2024] Open
Abstract
Tuberculosis (TB) is an infectious disease caused by Mycobacterium tuberculosis bacteria, which is more prevalent among immunocompromised individuals. According to the distribution of affected organs, this infection can be categorized as either pulmonary or extrapulmonary TB. Immunodeficiency states resulting from rheumatological disorders and the use of immunosuppressive medications, such as in Behçet's disease (BD), are potential predisposing factors for TB, particularly in cases involving multiple organs. These situations can introduce challenges in both the diagnosis and treatment of patients. We describe a 43-year-old man with a history of BD who presented with symptoms of weight loss, abdominal pain, and shortness of breath. His chest X-ray revealed cavities and calcifications, while an abdominal X-ray demonstrated signs of intestinal obstruction and adhesions. Subsequent TB diagnosis led to a 6-month course of a TB treatment regimen. Despite treatment initiation, the patient developed a brain abscess 1 year later, necessitating surgical intervention. Following the procedure, he received another 1-year course of a TB treatment regimen and experienced full recovery without any complications during a 2-year follow-up period. Notably, the patient recently received a Sinopharm COVID-19 vaccine and subsequently developed seizures that are currently being managed with anticonvulsant therapy. This case report emphasizes the significance of including pulmonary TB in complex medical cases, especially in individuals with autoimmune diseases. Early diagnosis and treatment are crucial for improving outcomes and reducing the risk of complications. Furthermore, it highlights the possible correlation between TB and BD, along with the potential adverse reactions to COVID-19 vaccines in this population, which necessitate special consideration by healthcare professionals.
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Affiliation(s)
- Homina Saffar
- Student Research Committee, Faculty of MedicineMazandaran University of Medical SciencesSariMazandaranIran
| | - Pooria Sobhanian
- Student Research Committee, Faculty of MedicineMazandaran University of Medical SciencesSariMazandaranIran
| | - Shahriar Alian
- Department of Infectious Diseases, School of Medicine, Antimicrobial Resistance Research Center, Communicable Diseases Institute, Ghaem Shahr Razi HospitalMazandaran University of Medical SciencesSariMazandaranIran
| | - David Darvishnia
- Faculty of MedicineMazandaran University of Medical SciencesSariMazandaranIran
| | - Mansoureh Baradaran
- Department of Radiology, Imam Ali HospitalNorth Khorasan University of Medical ScienceBojnurdNorth KhorasanIran
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24
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Wu K, Wu Z, Li X. Clinical diagnostic value of CRISPR-Cas13a-based molecular technology for tuberculosis. Ir J Med Sci 2024; 193:2889-2895. [PMID: 39298089 DOI: 10.1007/s11845-024-03799-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2024] [Accepted: 08/29/2024] [Indexed: 09/21/2024]
Abstract
OBJECTIVE To address the clinical diagnostic value of CRISPR-Cas13a-based molecular technology for tuberculosis (TB). METHODS The 189 suspected TB patients were simultaneously sent for acid-fast staining smear of bronchoalveolar lavage fluid, MGIT 960 cultures, Xpert MTB/RIF assay, and CRISPR-Cas13a assay. Using the final clinical diagnosis as the gold standard, the TB and non-TB groups were determined, and the diagnostic values of the four assays and the combined test in TB were compared. Using MGIT 960 culture as the gold standard, the diagnostic value of CRISPR-Cas13a assay was explored in TB, and the concordance between the CRISPR-Cas13a assay and MGIT 960 culture was compared. RESULTS The 189 preliminary diagnosed patients with suspected TB were diagnosed, with 147 in the TB group and 42 in the non-TB group. Taking the final clinical diagnosis as the gold standard, the sensitivity, negative predictive value, and accuracy of CRISPR-Cas13a assay, MGIT 960 culture, and XpertMTB/RIF assay were higher than those of acid-fast staining smear; by comparing the area under the ROC curve, the diagnostic value of the CRISPR-Cas13a assay, MGIT 960 culture, and XpertMTB/RIF assay was superior to that of acid-fast staining smear (all P < 0.05). Using the MGIT 960 culture results as the gold standard, there was a moderate concordance between the CRISPR-Cas13a assay and the MGIT 960 culture (kappa = 0.666). CONCLUSION Bronchoalveolar lavage fluid CRISPR-Cas13a assay has high application value in the clinical diagnosis of TB and can be recommended for the initial screening of patients with suspected TB.
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Affiliation(s)
- Kai Wu
- Department of Thoracic Surgery, Jianghan Oilfield General Hospital, No. T32 Ankang Road, Qianjiang, 433124, Hubei, China
| | - Zhenyao Wu
- Department of Thoracic Surgery, Jianghan Oilfield General Hospital, No. T32 Ankang Road, Qianjiang, 433124, Hubei, China
| | - Xiongjie Li
- Department of Thoracic Surgery, Jianghan Oilfield General Hospital, No. T32 Ankang Road, Qianjiang, 433124, Hubei, China.
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25
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Gao T, Ou X, Miao J, Qin Y. Quantification of MDR-TB drug JBD0131 and its metabolite in plasma via UPLC-MS/MS: application in first-in-human study. Bioanalysis 2024; 16:1229-1240. [PMID: 39373613 PMCID: PMC11702988 DOI: 10.1080/17576180.2024.2404311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Accepted: 09/11/2024] [Indexed: 10/08/2024] Open
Abstract
Aim: JBD0131, a novel anti-multidrug-resistant tuberculosis (MDR-TB) drug, can target and inhibit the synthesis of mycolic acids, which are crucial components of the cell wall of the Mycobacterium tuberculosis complex. To support the results of this clinical trial in healthy subjects, development of a specific and accurate quantification method for detecting JBD0131 and its metabolite DM131 in human plasma is needed.Materials & methods: Samples with prior added stabilizer were pretreated by protein precipitation method and the extracts were subjected to ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS). The m/z transitions for the precursor/product ion pairs were 402.1/273 for JBD0131, 333.1/273 for DM131 and 386.1/257 for the internal standard (IS).Results: This method showed good linearity from 1 to 2000 ng/ml for JBD0131 and 0.25 to 500 ng/ml for DM131 and was validated in terms of selectivity, linearity, accuracy, precision, matrix effect, recovery of pretreament and stability.Conclusion: This method was sensitive and specific for measuring the plasma concentrations of JBD0131 and its metabolites. And it was applied for the investigation of the pharmacokinetics of JBD0131 and DM131 in a clinical trial.
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Affiliation(s)
- Tiantao Gao
- Department of Pharmacy, West China Hospital, Sichuan University, Chengdu, 610041, China
- NMPA Key Laboratory for Clinical Research and Evaluation of Innovative Drug, Clinical Trial Center, West China Hospital, Sichuan University, Chengdu, 610041, China
| | - Xiaoxue Ou
- Department of Pharmacy, West China Hospital, Sichuan University, Chengdu, 610041, China
- NMPA Key Laboratory for Clinical Research and Evaluation of Innovative Drug, Clinical Trial Center, West China Hospital, Sichuan University, Chengdu, 610041, China
| | - Jia Miao
- NMPA Key Laboratory for Clinical Research and Evaluation of Innovative Drug, Clinical Trial Center, West China Hospital, Sichuan University, Chengdu, 610041, China
| | - Yongping Qin
- Department of Pharmacy, West China Hospital, Sichuan University, Chengdu, 610041, China
- NMPA Key Laboratory for Clinical Research and Evaluation of Innovative Drug, Clinical Trial Center, West China Hospital, Sichuan University, Chengdu, 610041, China
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26
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Ho JSS, Ping TL, Paudel KR, El Sherkawi T, De Rubis G, Yeung S, Hansbro PM, Oliver BGG, Chellappan DK, Sin KP, Dua K. Exploring Bioactive Phytomedicines for Advancing Pulmonary Infection Management: Insights and Future Prospects. Phytother Res 2024; 38:5840-5872. [PMID: 39385504 PMCID: PMC11634825 DOI: 10.1002/ptr.8334] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Revised: 07/03/2024] [Accepted: 07/12/2024] [Indexed: 10/12/2024]
Abstract
Pulmonary infections have a profound influence on global mortality rates. Medicinal plants offer a promising approach to address this challenge, providing nontoxic alternatives with higher levels of public acceptance and compliance, particularly in regions where access to conventional medications or diagnostic resources may be limited. Understanding the pathophysiology of viruses and bacteria enables researchers to identify biomarkers essential for triggering diseases. This knowledge allows the discovery of biological molecules capable of either preventing or alleviating symptoms associated with these infections. In this review, medicinal plants that have an effect on COVID-19, influenza A, bacterial and viral pneumonia, and tuberculosis are discussed. Drug delivery has been briefly discussed as well. It examines the effect of bioactive constituents of these plants and synthesizes findings from in vitro, in vivo, and clinical studies conducted over the past decade. In conclusion, many medicinal plants can be used to treat pulmonary infections, but further in-depth studies are needed as most of the current studies are only at preliminary stages. Extensive investigation and clinical studies are warranted to fully elucidate their mechanisms of action and optimize their use in clinical practice.
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Affiliation(s)
- Joyce Siaw Syuen Ho
- Department of Pharmaceutical Chemistry, School of PharmacyInternational Medical UniversityKuala LumpurMalaysia
| | - Teh Li Ping
- Department of Pharmaceutical Chemistry, School of PharmacyInternational Medical UniversityKuala LumpurMalaysia
| | - Keshav Raj Paudel
- Centre for Inflammation, School of Life Sciences, Faculty of ScienceCentenary Institute and the University of Technology SydneySydneyAustralia
| | - Tammam El Sherkawi
- Discipline of Pharmacy, Graduate School of HealthUniversity of Technology SydneySydneyAustralia
| | - Gabriele De Rubis
- Discipline of Pharmacy, Graduate School of HealthUniversity of Technology SydneySydneyAustralia
- Australian Research Centre in Complementary and Integrative Medicine, Faculty of HealthUniversity of Technology SydneyUltimoAustralia
| | - Stewart Yeung
- Discipline of Pharmacy, Graduate School of HealthUniversity of Technology SydneySydneyAustralia
| | - Philip M. Hansbro
- Centre for Inflammation, School of Life Sciences, Faculty of ScienceCentenary Institute and the University of Technology SydneySydneyAustralia
| | - Brian Gregory George Oliver
- School of Life ScienceUniversity of Technology SydneyUltimoAustralia
- Woolcock Institute of Medical ResearchMacquarie UniversitySydneyAustralia
| | - Dinesh Kumar Chellappan
- Department of Life Sciences, School of PharmacyInternational Medical UniversityKuala LumpurMalaysia
| | - Keng Pei Sin
- Department of Pharmaceutical Chemistry, School of PharmacyInternational Medical UniversityKuala LumpurMalaysia
| | - Kamal Dua
- Discipline of Pharmacy, Graduate School of HealthUniversity of Technology SydneySydneyAustralia
- Australian Research Centre in Complementary and Integrative Medicine, Faculty of HealthUniversity of Technology SydneyUltimoAustralia
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Liu C, Chen M, Xu J, Yi F, Li X, Zhang H, Wang Y, He S, Jin T. DPF3 polymorphisms increased the risk of pulmonary tuberculosis in the Northwest Chinese Han population. Gene 2024; 927:148617. [PMID: 38795855 DOI: 10.1016/j.gene.2024.148617] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 05/20/2024] [Accepted: 05/22/2024] [Indexed: 05/28/2024]
Abstract
PURPOSE This study aimed to investigate the association between single nucleotide polymorphisms (SNPs) in DPF3 and susceptibility to pulmonary tuberculosis (PTB) in the Northwest Chinese Han population. METHODS Genotyping of four DPF3 SNPs (rs10140566, rs75575287, rs202075571, and rs61986330) was performed using Agena MassARRAY from 488 PTB patients and 488 healthy controls. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated using logistic regression. Multifactor dimensionality reduction (MDR) analysis was employed to investigate the effect of SNP-SNP interactions on PTB risk. The GSE54992 dataset was analyzed using R software to ascertain DPF3 expression levels. RESULTS Overall analysis revealed that rs202075571 (allele: OR = 1.31, p = 0.015; CC vs. TT: OR = 1.97, p = 0.049; dominant: OR = 1.33, p = 0.032) and rs61986330 (allele: OR = 1.38, p = 0.010; CA vs. CC: OR = 1.35, p = 0.044; dominant: OR = 1.40, p = 0.019) were associated with an increased PTB risk. Stratified analysis showed that rs10140566 was a PTB risk factor in females, those aged ≤40 and non-smokers, and rs202075571 was associated with PTB risk in individuals aged >40 and smokers, and rs61986330 was associated with PTB risk in males, those aged >40 and smokers. The four SNPs model demonstrated significant predictive potential for PTB risk. Furthermore, DPF3 exhibited higher expression in PTB compared to healthy controls. CONCLUSION DPF3 polymorphisms (rs10140566, rs202075571, and rs61986330) are associated with an increased risk of PTB, providing valuable new insights into the mechanism of PTB.
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Affiliation(s)
- Changchun Liu
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China
| | - Mingyue Chen
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China
| | - Jinpeng Xu
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China
| | - Faling Yi
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China
| | - Xuemei Li
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China
| | - Hengxun Zhang
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China; Department of Healthcare, the Affiliated Hospital of Xizang Minzu University, Xianyang, Shaanxi 712082, China
| | - Yuhe Wang
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China; Department of Clinical Laboratory, the Affiliated Hospital of Xizang Minzu University, Xianyang, Shaanxi 712082, China
| | - Shumei He
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China.
| | - Tianbo Jin
- Key Laboratory of High Altitude Hypoxia Environment and Life Health, School of Medicine, Xizang Minzu University, Xianyang 712082, Shaanxi, China.
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28
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Yang H, Ruan X, Li W, Xiong J, Zheng Y. Global, regional, and national burden of tuberculosis and attributable risk factors for 204 countries and territories, 1990-2021: a systematic analysis for the Global Burden of Diseases 2021 study. BMC Public Health 2024; 24:3111. [PMID: 39529028 PMCID: PMC11552311 DOI: 10.1186/s12889-024-20664-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2024] [Accepted: 11/07/2024] [Indexed: 11/16/2024] Open
Abstract
BACKGROUND Tuberculosis (TB) remains a major global health threat. Despite ongoing efforts to control and eradicate TB, various factors including socioeconomic issues, policy modifications, and unexpected public health crises like COVID-19 pandemic have posed new obstacles to achieving TB elimination. This study aims to analyze the changes in global tuberculosis burden over the past 32 years, and provide scientific support for global initiatives targeting the eradication of TB in the post-pandemic period. METHODS The data for this study were obtained from the Global Burden of Disease (GBD) 2021 database, with age-standardized incidence rate (ASIR), prevalence rate (ASPR), mortality rate (ASDR), and disability-adjusted life years (DALYs) as the primary assessment indicators. Dynamic changes in the TB burden were analyzed by estimating the annual percentage changes (EAPCs). The attributable ratios of six main risk factors to TB burden were calculated, and the correlation between the Socio-Demographic Index (SDI) and the TB burden was analyzed using Pearson correlation tests. RESULTS The global TB incidence decreased from 8.6 million cases in 1990 to 8.4 million cases in 2021, with a corresponding decline in deaths. However, the TB burden remains higher among men than women. The highest incidence and mortality rates were observed in the age group of 15-69 years, with a notable gender disparity, especially in Eastern Europe. These rates were generally elevated in low-income and lower-middle-income regions, with significantly higher Age-Standardized Incidence Rates and Age-Standardized Death Rates in males compared to females. A significant negative correlation was found between SDI values and TB burden. Analyzing risk factors from the Global Burden of Disease study, it was determined that globally, dietary risks, high body-mass index, high fasting plasma glucose, low physical activity, tobacco, and alcohol use were the main contributors to TB age-standardized Disability-Adjusted Life Years, with tobacco and alcohol use having the most significant impact. Analysis of risk factors suggests that tailored public health interventions for specific genders and regions can effectively lessen the TB burden.
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Affiliation(s)
- Huafei Yang
- School of Public Health, Hangzhou Normal University, Hangzhou, Zhejiang, 311121, China
| | - Xinyi Ruan
- School of Public Health, Hangzhou Normal University, Hangzhou, Zhejiang, 311121, China
| | - Wanyue Li
- School of Public Health, Hangzhou Normal University, Hangzhou, Zhejiang, 311121, China
| | - Jun Xiong
- School of Public Health, Hangzhou Normal University, Hangzhou, Zhejiang, 311121, China.
| | - Yuxin Zheng
- School of Public Health, Hangzhou Normal University, Hangzhou, Zhejiang, 311121, China
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Wang M, Tian M, Xu D, Zhao Q, Wang H. Clinical effect of MRZE chemotherapy combined with cluster nursing intervention in the treatment of patients with pulmonary tuberculosis and its influence on the levels of inflammatory factors and CT signs. Biotechnol Genet Eng Rev 2024; 40:2520-2534. [PMID: 37042342 DOI: 10.1080/02648725.2023.2200305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Accepted: 04/03/2023] [Indexed: 04/13/2023]
Abstract
The study aimed to analyze the clinical effect of MRZE chemotherapy combined with cluster nursing intervention and treatment of pulmonary tuberculosis patients and its influence on CT signs. A total of 94 patients treated in our hospital from March 2020 to October 2021 were selected as the research object. Both groups were treated with MRZE chemotherapy regimen. Patients in the control group received routine nursing mode on this basis, and patients in the observation group received cluster nursing on the basis of the control group. The clinical efficacy, adverse reactions, compliance and nursing satisfaction, detection rate of immune function pulmonary oxygen index and pulmonary function CT signs and the level of inflammatory factors before and after nursing were compared between the two groups. The total effective rate of the observation group was significantly higher than that of the control group. The compliance rate and nursing satisfaction of the observation group were significantly higher than those of the control group. The differences of adverse reactions between the observation and control groups were statistically significant. After nursing, the scores of tuberculosis prevention and control of tuberculosis infection route, tuberculosis symptoms, tuberculosis policy and tuberculosis infection awareness in the observation group were significantly higher than those in the control group, and the differences were statistically significant. MRZE chemotherapy combined with cluster nursing intervention model for pulmonary tuberculosis patients can effectively improve the treatment compliance and nursing satisfaction of patients, and it is worthy of clinical promotion and application.
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Affiliation(s)
- Mei Wang
- Department of PIVAS, Affiliated Qingdao Central Hospital of Qingdao University, Qingdao Cancer Hospital, Qingdao, China
| | - Miaoyan Tian
- Department of Pharmacy, Affiliated Qingdao Central Hospital of Qingdao University, Qingdao Cancer Hospital, Qingdao, China
| | - Dan Xu
- Department of PICC Outpatient, Affiliated Qingdao Central Hospital of Qingdao University, Qingdao Cancer Hospital, Qingdao, China
| | - Qiang Zhao
- Department of Trauma Orthopedics, Zhangqiu District People's Hospital, Jinan, China
| | - Haiyang Wang
- Department of Thoracic (V), North Hospital of Qingdao Central Hospital, Qingdao, China
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Kelley JT, Kroll-Wheeler L, Hrycaj S, Chan MP, Cheng J, Lamps LW. Nonspecificity of Immunohistochemistry for Mycobacteria Species Using a Rabbit Polyclonal Antibody. Arch Pathol Lab Med 2024; 148:e367-e373. [PMID: 38511288 DOI: 10.5858/arpa.2023-0412-oa] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/28/2023] [Indexed: 03/22/2024]
Abstract
CONTEXT.— Recent publications have featured immunohistochemistry (IHC) as a sensitive tool for detecting Mycobacterium tuberculosis and nontuberculous mycobacteria, but performance is limited to cases suspected to have mycobacterial infection. OBJECTIVE.— To examine cross-reactivity of a polyclonal antimycobacterial antibody with various types of pathogens, tissues, and inflammatory patterns. DESIGN.— Surgical pathology files during a period of 6 years were searched, and 40 cases representing a variety of pathogens, tissue types, and inflammatory responses were retrieved. Cases were stained with a rabbit polyclonal antimycobacterial antibody (Biocare Medical, Pacheco, California). The cases and associated histochemical stains, culture, and molecular results were reviewed by 3 pathologists. RESULTS.— All 8 cases of mycobacterial infection previously diagnosed by other methods were positive for mycobacteria by IHC. In addition, multiple bacterial and fungal organisms and 1 case of Leishmania amastigotes were also immunoreactive with the mycobacterial IHC. CONCLUSIONS.— Although highly sensitive for mycobacteria, the polyclonal antibody shows significant cross-reactivity with other organisms. This is a sensitive but nonspecific stain that can be used as an alternative confirmation method for mycobacteria, but attention should be paid to inflammatory reaction and organism morphology when IHC is positive to avoid misdiagnosis.
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Affiliation(s)
- Justin T Kelley
- From the Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee (Kelley)
| | - Lauren Kroll-Wheeler
- the Department of Pathology, University of Michigan, Michigan Medicine, Ann Arbor, Michigan (Kroll-Wheeler, Hrycaj, Chan, Cheng, Lamps)
| | - Steven Hrycaj
- the Department of Pathology, University of Michigan, Michigan Medicine, Ann Arbor, Michigan (Kroll-Wheeler, Hrycaj, Chan, Cheng, Lamps)
| | - May P Chan
- the Department of Pathology, University of Michigan, Michigan Medicine, Ann Arbor, Michigan (Kroll-Wheeler, Hrycaj, Chan, Cheng, Lamps)
| | - Jerome Cheng
- the Department of Pathology, University of Michigan, Michigan Medicine, Ann Arbor, Michigan (Kroll-Wheeler, Hrycaj, Chan, Cheng, Lamps)
| | - Laura W Lamps
- the Department of Pathology, University of Michigan, Michigan Medicine, Ann Arbor, Michigan (Kroll-Wheeler, Hrycaj, Chan, Cheng, Lamps)
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31
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Nezhad NZ, Fekri MS, Shahpar A, Nakhaie M, Khazaeli M, Farrokhnia M, Salajegheh F. Diagnostic Dilemma: Investigating Respiratory Symptoms in a Middle-Aged Smoker. Clin Case Rep 2024; 12:e9564. [PMID: 39582730 PMCID: PMC11583076 DOI: 10.1002/ccr3.9564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Revised: 08/08/2024] [Accepted: 08/25/2024] [Indexed: 11/26/2024] Open
Abstract
This case report presents a diagnostic challenge encountered in a 65-year-old male admitted with fever, dyspnea, chest pain, and hemoptysis, alongside constitutional symptoms including weight loss, night sweats, and fatigue. Despite initial suspicion for pulmonary thromboembolism and empirical antibiotic therapy for pneumonia, subsequent bronchoscopic evaluation revealed acute necrotizing granulomatous bronchitis, strongly indicative of endobronchial tuberculosis (TB). This diagnosis emphasizes the importance of considering TB in patients with chronic respiratory symptoms, particularly in high-risk populations. Management involves initiating multidrug antitubercular therapy, close monitoring, infection control measures, and patient education. Prompt diagnosis and appropriate management are crucial in optimizing outcomes and reducing disease burden in TB.
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Affiliation(s)
- Nazanin Zeinali Nezhad
- Physiology Research Center Institute of Neuropharmacology, Kerman University of Medical Sciences Kerman Iran
| | - Mitra Samareh Fekri
- Clinical Research Development Unit, Afzalipour Hospital Kerman University of Medical Sciences Kerman Iran
| | - Amirhossein Shahpar
- Gastroenterology and Hepatology Research Center Institute of Basic and Clinical Physiology Sciences, Kerman University of Medical Sciences Kerman Iran
| | - Mohsen Nakhaie
- Clinical Research Development Unit, Afzalipour Hospital Kerman University of Medical Sciences Kerman Iran
- Gastroenterology and Hepatology Research Center Institute of Basic and Clinical Physiology Sciences, Kerman University of Medical Sciences Kerman Iran
| | - Mana Khazaeli
- Clinical Research Development Unit, Afzalipour Hospital Kerman University of Medical Sciences Kerman Iran
| | - Mehrdad Farrokhnia
- Infectious and Tropical Research Center Kerman University of Medical Sciences Kerman Iran
| | - Faranak Salajegheh
- Clinical Research Development Unit, Afzalipour Hospital Kerman University of Medical Sciences Kerman Iran
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Turan H, Gunak F, Yasaci Z, Ethemoglu G, Aygun S. Impact of the COVID-19 pandemic and migration on tuberculosis notifications: a retrospective analysis with 5-year data from three centers. Eur J Clin Microbiol Infect Dis 2024; 43:2001-2009. [PMID: 39110338 DOI: 10.1007/s10096-024-04918-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2024] [Accepted: 07/29/2024] [Indexed: 09/18/2024]
Abstract
PURPOSE We aimed to determine the incidence of TB among immigrants and non-immigrants in Sanliurfa, Türkiye between 2018 and 2022 and to examine the effect of COVID-19 on the incidence, location, and drug resistance patterns of tuberculosis. METHODS This study was a retrospective review of patients diagnosed with tuberculosis in Şanlıurfa Tuberculosis Dispensary between January-2018 and May-2022. Patients were assessed in terms of age, sex, site of tuberculosis, and drug resistance profiles before and during the COVID-19 pandemic. RESULTS A total of 887 patients with TB were included in the study. The mean age of patients diagnosed with tuberculosis was 40.63 ± 17.50 years. Of the total number of patients diagnosed, 50.7% were women, 85.8% were Turkish citizens, and 91.9% were new cases. Comparing the rate of positive cultures between the pre-COVID-19 and COVID-19 periods revealed a statistically significant rate of positive culture during the COVID-19 period (p < 0.001). In terms of mortality, the mean age of the patients who died was 60.2 ± 18.4 years and that of the survivors was 39.1 ± 16.6 years; these values were statistically significant (p < 0.001). Among the patients who survived, the rate of pulmonary tuberculosis was statistically significantly higher than that of extrapulmonary tuberculosis (p < 0.001). CONCLUSION The prevalence of pulmonary TB is high and the proportion of women is increasing. During the COVID-19 period, the number of patients diagnosed with TB decreased, but interestingly, the rate of positive cultures remained high, and the rate of resistance to INH also decreased. The results revealed rates similar to those reported by the World Health Organization.
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Affiliation(s)
- Hamdiye Turan
- Department of Chest Diseases, Harran University Faculty of Medicine, Sanlıurfa, Türkiye
| | - Faruk Gunak
- Department of Chest Diseases, Mehmet Akif Inan Training and Research Hospital, Sanlıurfa, Türkiye
| | - Zeynal Yasaci
- Faculty of Health Sciences, Division of Physiotherapy and Rehabilitation, Harran University, Osmanbey Campus, Sanliurfa, Türkiye.
| | - Gulsah Ethemoglu
- Department of Chest Diseases, Harran University Faculty of Medicine, Sanlıurfa, Türkiye
| | - Sevgi Aygun
- Sanlıurfa Central Tuberculosis Dispensary, Sanlıurfa, Türkiye
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Chen H, Gu W, Zhang H, Yang Y, Qian L. Research on improved YOLOv8s model for detecting mycobacterium tuberculosis. Heliyon 2024; 10:e38088. [PMID: 39328536 PMCID: PMC11425164 DOI: 10.1016/j.heliyon.2024.e38088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 09/16/2024] [Accepted: 09/17/2024] [Indexed: 09/28/2024] Open
Abstract
Accurate identification of Mycobacterium tuberculosis (M. tuberculosis) is a critical step in the diagnosis of tuberculosis. Existing object detection methods struggle with the challenges posed by the varied morphology and size of M. tuberculosis in sputum smear images, which makes precise targeting difficult. To solve these problems, an improved YOLOv8s model is proposed. Specifically, an additional detection head is added to focus on small target information. Second, a multi-scale feature fusion module is introduced to adapt the model to different sizes of M. tuberculosis. In addition, a convolutional layer is added to the Coordinate Attention (CA) module to extract more advanced semantic features. Finally, a self-attention mechanism is added after the CA module to enhance the model's ability to accurately understand and localize the varied morphology of M. tuberculosis. Our model performed well with an average precision of 85.7 % when tested on a publicly available dataset. This clearly demonstrates the effectiveness of our proposed model in M. tuberculosis detection.
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Affiliation(s)
- Hao Chen
- School of Information Engineering, Nantong Institute of Technology, Nantong, 226002, China
| | - Wenye Gu
- Affiliated Hospital of Nantong University, Nantong, 226007, China
| | - Haifei Zhang
- School of Information Engineering, Nantong Institute of Technology, Nantong, 226002, China
| | - Yuwei Yang
- School of Information Engineering, Nantong Institute of Technology, Nantong, 226002, China
| | - Lanmei Qian
- School of Information Engineering, Nantong Institute of Technology, Nantong, 226002, China
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Zhao D, Zhang H, Wu X, Zhang L, Li S, He S. Spatial and temporal analysis and forecasting of TB reported incidence in western China. BMC Public Health 2024; 24:2504. [PMID: 39272092 PMCID: PMC11401417 DOI: 10.1186/s12889-024-19994-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 09/04/2024] [Indexed: 09/15/2024] Open
Abstract
OBJECTIVE Tuberculosis (TB) remains an important public health concern in western China. This study aimed to explore and analyze the spatial and temporal distribution characteristics of TB reported incidence in 12 provinces and municipalities in western China and to construct the optimal models for prediction, which would provide a reference for the prevention and control of TB and the optimization of related health policies. METHODS We collected monthly data on TB reported incidence in 12 provinces and municipalities in western China and used ArcGIS software to analyze the spatial and temporal distribution characteristics of TB reported incidence. We applied the seasonal index method for the seasonal analysis of TB reported incidence and then established the SARIMA and Holt-Winters models for TB reported incidence in 12 provinces and municipalities in western China. RESULTS The reported incidence of TB in 12 provinces and municipalities in western China showed apparent spatial clustering characteristics, and Moran's I was greater than 0 (p < 0.05) over 8 years during the reporting period. Among them, Tibet was the hotspot for TB incidence in 12 provinces and municipalities in western China. The reported incidence of TB in 12 provinces and municipalities in western China from 2004 to 2018 showed clear seasonal characteristics, with seasonal indices greater than 100% in both the first and second quarters. The optimal models constructed for TB reported incidence in 12 provinces and municipalities in western China all passed white noise test (p > 0.05). CONCLUSIONS As a hotspot of reported TB incidence, Tibet should continue to strengthen government leadership and policy support, explore TB intervention strategies and causes. The optimal prediction models we developed for reported TB incidence in 12 provinces and municipalities in western China were different.
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Affiliation(s)
- Daren Zhao
- Department of Medical Administration, Sichuan Provincial Orthopedics Hospital, Chengdu, Sichuan, P.R. China.
| | - Huiwu Zhang
- Department of Medical Administration, Sichuan Provincial Orthopedics Hospital, Chengdu, Sichuan, P.R. China.
- School of Management, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, P.R. China.
| | - Xuelian Wu
- School of Management, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, P.R. China
| | - Lan Zhang
- School of Management, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, P.R. China
| | - Shiyuan Li
- Department of Endemic Diseases, Chongzhou Centre for Disease Control and Prevention, Chengdu, Sichuan, P.R. China
| | - Sizhang He
- Department of Information and Statistics, The Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan, 64600, P.R. China
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Bartolomeu-Gonçalves G, Souza JMD, Fernandes BT, Spoladori LFA, Correia GF, Castro IMD, Borges PHG, Silva-Rodrigues G, Tavares ER, Yamauchi LM, Pelisson M, Perugini MRE, Yamada-Ogatta SF. Tuberculosis Diagnosis: Current, Ongoing, and Future Approaches. Diseases 2024; 12:202. [PMID: 39329871 PMCID: PMC11430992 DOI: 10.3390/diseases12090202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Revised: 08/31/2024] [Accepted: 08/31/2024] [Indexed: 09/28/2024] Open
Abstract
Tuberculosis (TB) remains an impactful infectious disease, leading to millions of deaths every year. Mycobacterium tuberculosis causes the formation of granulomas, which will determine, through the host-pathogen relationship, if the infection will remain latent or evolve into active disease. Early TB diagnosis is life-saving, especially among immunocompromised individuals, and leads to proper treatment, preventing transmission. This review addresses different approaches to diagnosing TB, from traditional methods such as sputum smear microscopy to more advanced molecular techniques. Integrating these techniques, such as polymerase chain reaction (PCR) and loop-mediated isothermal amplification (LAMP), has significantly improved the sensitivity and specificity of M. tuberculosis identification. Additionally, exploring novel biomarkers and applying artificial intelligence in radiological imaging contribute to more accurate and rapid diagnosis. Furthermore, we discuss the challenges of existing diagnostic methods, including limitations in resource-limited settings and the emergence of drug-resistant strains. While the primary focus of this review is on TB diagnosis, we also briefly explore the challenges and strategies for diagnosing non-tuberculous mycobacteria (NTM). In conclusion, this review provides an overview of the current landscape of TB diagnostics, emphasizing the need for ongoing research and innovation. As the field evolves, it is crucial to ensure that these advancements are accessible and applicable in diverse healthcare settings to effectively combat tuberculosis worldwide.
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Affiliation(s)
- Guilherme Bartolomeu-Gonçalves
- Programa de Pós-Graduação em Fisiopatologia Clínica e Laboratorial, Universidade Estadual de Londrina, Londrina CEP 86038-350, Paraná, Brazil
| | - Joyce Marinho de Souza
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
- Faculdade de Ciências da Saúde, Biomedicina, Universidade do Oeste Paulista, Presidente Prudente CEP 19050-920, São Paulo, Brazil
| | - Bruna Terci Fernandes
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
- Curso de Farmácia, Faculdade Dom Bosco, Cornélio Procópio CEP 86300-000, Paraná, Brazil
| | | | - Guilherme Ferreira Correia
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
| | - Isabela Madeira de Castro
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
| | | | - Gislaine Silva-Rodrigues
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
| | - Eliandro Reis Tavares
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
- Departamento de Medicina, Pontifícia Universidade Católica do Paraná, Campus Londrina CEP 86067-000, Paraná, Brazil
| | - Lucy Megumi Yamauchi
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
| | - Marsileni Pelisson
- Programa de Pós-Graduação em Fisiopatologia Clínica e Laboratorial, Universidade Estadual de Londrina, Londrina CEP 86038-350, Paraná, Brazil
| | - Marcia Regina Eches Perugini
- Programa de Pós-Graduação em Fisiopatologia Clínica e Laboratorial, Universidade Estadual de Londrina, Londrina CEP 86038-350, Paraná, Brazil
| | - Sueli Fumie Yamada-Ogatta
- Programa de Pós-Graduação em Fisiopatologia Clínica e Laboratorial, Universidade Estadual de Londrina, Londrina CEP 86038-350, Paraná, Brazil
- Programa de Pós-Graduação em Microbiologia, Universidade Estadual de Londrina, Londrina CEP 86057-970, Paraná, Brazil
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Xu W, Yang J, Yu H, Li S. Diagnostic value of lncRNAs LINC00152 and LARS2-AS1 and their regulatory roles in macrophage immune response in tuberculosis. Tuberculosis (Edinb) 2024; 148:102530. [PMID: 38857553 DOI: 10.1016/j.tube.2024.102530] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 06/04/2024] [Accepted: 06/05/2024] [Indexed: 06/12/2024]
Abstract
OBJECTIVES To determine the usefulness of LINC00152 and LARS2-AS1 as potential biomarkers for latent tuberculosis (LTB) and active tuberculosis (ATB), as well as their effect on Mycobacterium (Mtb) infection. METHODS The expression levels of LINC00152 and LARS2-AS1 in the health, patients with LTB and ATB were detected by qRT-PCR. The ROC curves were constructed to show their potential as biomarkers. The intracellular survival assays for Mtb and the levels of immune-related cytokines were determined to discover the effect of LINC00152 and LARS2-AS1 on Mtb infection. The relationships of miR-485-5p with LINC00152 and LARS2-AS1 were explored. RESULTS LINC00152 and LARS2-AS1 levels were significantly elevated in patients with ATB and LTB, and Mtb-infected macrophages. LINC00152 and LARS2-AS1 can distinguish the LTB from the health and ATB from LTB. LARS2-AS1 and LINC00152 knock-down reduced the intracellular Mtb survival and induced cellular immune response after Mtb challenge. miR-485-5p was a targeting miRNA for LINC00152 and LARS2-AS1. CONCLUSIONS LINC00152 and LARS2-AS1 can be considered as potential biomarkers for tuberculosis disease. LINC00152 and LARS2-AS1 have anti-Mtb effects.
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Affiliation(s)
- Wenlong Xu
- Department of Clinical Laboratory, Shanghai Yangsi Hospital, Shanghai, 200126, China
| | - Jihua Yang
- Department of Ultrasound, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, China
| | - Haizhen Yu
- Department of Clinical Laboratory, Zhucheng People's Hospital, Zhucheng, 262299, China
| | - Shizhen Li
- Department of Clinical Laboratory, Zhucheng People's Hospital, Zhucheng, 262299, China.
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Song C, Zhao C, Nong Y, Lin Y, Huang A, Xi S, Wei X, Zeng C, Qin Y, Zhu Q. Exploring the accuracy of third-generation Nanopore Sequencing technology for detecting mycobacterium tuberculosis in patients with diabetes mellitus. Diagn Microbiol Infect Dis 2024; 110:116392. [PMID: 38875895 DOI: 10.1016/j.diagmicrobio.2024.116392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2024] [Revised: 05/17/2024] [Accepted: 06/03/2024] [Indexed: 06/16/2024]
Abstract
OBJECTIVE To explore the diagnostic value of third-generation nanopore sequencing technology in patients with diabetes mellitus suspected of pulmonary tuberculosis. METHODS Samples, including sputum and bronchoalveolar lavage fluid(BALF), were collected from patients with diabetes mellitus suspected of pulmonary tuberculosis who were admitted from October 2021 to August 2023. Nanopore sequencing, acid-fast bacilli (AFB) smear, mycobacterial solid culture, Xpert MTB/RIF, and DNA detection were performed, and their diagnostic efficacy was compared. RESULTS Third-generation nanopore sequencing technology exhibited high accuracy in diagnosing pulmonary tuberculosis in patients with diabetes mellitus. Compared to traditional methods, nanopore sequencing showed significantly improved sensitivity (76.80 %), negative predictive value (30.40 %), coincidence (77.92 %), and diagnostic accuracy (AUC = 0.822). Combined detection with Xpert achieved the highest diagnostic performance, with increased sensitivity (81.20 %), positive predictive value (98.20 %), negative predictive value (35.00 %), coincidence (81.82 %), and AUC (0.843). Although acid-fast staining had limitations, its combination with nanopore sequencing improved screening effectiveness. CONCLUSION Compared to established diagnostic modalities such as acid-fast staining, mycobacterial solid culture, Xpert MTB/RIF, and DNA detection, third-generation nanopore sequencing technology demonstrates a significant improvement in sensitivity for detecting suspected pulmonary tuberculosis in diabetic patients. Notably, the combined application of nanopore sequencing with Xpert testing offers a further enhancement in diagnostic accuracy.
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Affiliation(s)
- Chang Song
- Department of Tuberculosis, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023; Guangxi Medical University, Nanning, China
| | - Chunyan Zhao
- Department of Tuberculosis, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023; Guangxi Medical University, Nanning, China
| | - Yingxing Nong
- Department of Medical, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023
| | - Yanrong Lin
- Department of Tuberculosis, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023
| | - Aichun Huang
- Department of Tuberculosis, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023
| | - Shanyong Xi
- Department of Clinical Laboratory, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023
| | - Xiaoying Wei
- Department of Tuberculosis, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023
| | - Chunmei Zeng
- Department of Tuberculosis, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023
| | - Yaqin Qin
- Administrative Office, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023
| | - Qingdong Zhu
- Department of Tuberculosis, The Fourth People's Hospital of Nanning, NO.1 Changgang-two-li Road, Nanning, Guangxi, China, 530023.
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Alsulais FM, Alhaidhal BA, Mothana RA, Alanzi AR. Identification of echinoderm metabolites as potential inhibitors targeting wild-type and mutant forms of Escherichia coli RNA polymerase (RpoB) for tuberculosis treatment. PLoS One 2024; 19:e0304587. [PMID: 39213289 PMCID: PMC11364244 DOI: 10.1371/journal.pone.0304587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2024] [Accepted: 05/14/2024] [Indexed: 09/04/2024] Open
Abstract
Tuberculosis (TB) remains a critical global health challenge, with the emergence of drug-resistant strains heightening concerns. The development of effective drugs targeting both wild-type (WT) and mutant Escherichia coli RNA polymerase β subunit (RpoB) is crucial for global TB control, aiming to alleviate TB incidence, mortality, and transmission. This study employs molecular docking and ADMET analyses to screen echinoderm metabolites for their potential inhibition of Escherichia coli RNA polymerase, focusing on wild-type and mutant RpoB variants associated with TB drug resistance. The evaluation of docking results using the glide gscore led to the selection of the top 10 compounds for each protein receptor. Notably, CMNPD2176 demonstrated the highest binding affinity against wild-type RpoB, CMNPD13873 against RpoB D516V mutant, CMNPD2177 against RpoB H526Y mutant, and CMNPD11620 against RpoB S531L mutant. ADMET screening confirmed the therapeutic potential of these selected compounds. Additionally, MM-GBSA binding free energy calculations and molecular dynamics simulations provided further support for the docking investigations. While the results suggest these compounds could be viable for tuberculosis treatment, it is crucial to note that further in-vitro research is essential for the transition from prospective inhibitors to clinical drugs.
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Affiliation(s)
- Fatimah M. Alsulais
- Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
| | - Bayan A. Alhaidhal
- Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
| | - Ramzi A. Mothana
- Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
| | - Abdullah R. Alanzi
- Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
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Sheela RM, Dhanasekar S. Analyzing risk factors of tuberculosis using type-2 interval-valued trapezoidal fuzzy numbers with Einstein aggregation operators extended to MCDM. Heliyon 2024; 10:e35997. [PMID: 39247314 PMCID: PMC11380000 DOI: 10.1016/j.heliyon.2024.e35997] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 08/07/2024] [Accepted: 08/07/2024] [Indexed: 09/10/2024] Open
Abstract
The principal motive of this work is to evolve and initiate an extension from interval-valued fuzzy sets to type-2 interval-valued fuzzy sets (T2IVFS) related to weighted aggregation functions containing the Einstein operator. The chief reason for this extension is that the constancy of the terms can also be taken into data during the aggregation operation. The main goal of this article is to compose the aggregation operators and their characteristics such as the Type-2 interval-valued fuzzy Einstein weighted arithmetic aggregating operator (T2IVFEWA), Type-2 interval-valued fuzzy Einstein weighted geometric aggregating operator (T2IVFEWG), and the characteristics are expressed. At last, to intimate the effectiveness of the suggested approach and explicate the purpose of these operators, a hybrid multi-criteria decision-making problem (MCDM) to select the best risk factor for Tuberculosis (TB) is considered and the result is compared with the outcome of the existing operators and methods. Additionally, a sensitivity analysis was conducted to verify the robustness of the proposed decision-making process.
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Affiliation(s)
- Rani M Sheela
- Department of Mathematics, School of Advanced Sciences, Vellore Institute of Technology, Chennai, 600127, India
| | - S Dhanasekar
- Department of Mathematics, School of Advanced Sciences, Vellore Institute of Technology, Chennai, 600127, India
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40
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Wang L, He Y, Wang P, Lou H, Liu H, Sha W. Single-cell transcriptome sequencing reveals altered peripheral blood immune cells in patients with severe tuberculosis. Eur J Med Res 2024; 29:434. [PMID: 39198909 PMCID: PMC11360321 DOI: 10.1186/s40001-024-01991-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Accepted: 07/19/2024] [Indexed: 09/01/2024] Open
Abstract
Tuberculosis is a serious global health burden, resulting in millions of deaths each year. Several circulating cell subsets in the peripheral blood are known to modulate the host immune response to Mycobacterium tuberculosis (Mtb) infection in different ways. However, the characteristics and functions of these subsets to varying stages of tuberculosis infection have not been well elucidated. Peripheral blood immune cells (PBICs) were isolated from healthy donors (HD group), individuals with mild tuberculosis (MI group), and individuals with severe tuberculosis (SE group). CD4+ naive T cells and CD8+ T cells were decreased in the SE and MI groups, while CD14+ monocytes were increased in the SE group. Further analysis revealed increased activated CD4+ T cells, transitional CD8+ T cells, memory-like NK cells, and IGHG3highTTNhighFCRL5high B cells were increased in all patients with tuberculosis (SE and MI group). In contrast, Th17 cells, cytotoxic NK cells, and cytotoxic CD4+ T cells were decreased. Moreover, the increase of CD14+CD16+ monocytes correlated with severe tuberculosis, and the GBP5highRSAD2high neutrophils were unique to patients with severe tuberculosis. Cellular communication analysis revealed that CD8+ T cells exhibited the highest incoming interaction strength in the SE group. The increased CD8+ T cell incoming interactions are associated with the MHC-I and LCK pathways, with HLA-(A-E)-CD8A, HLA-(A-E)-CD8B, and LCK-(CD8A+CD8B) being ligand-receptor pairs. Patients with tuberculosis, especially severe tuberculosis, have profound changes in peripheral blood immune cell profiles. CD8+ T cells showed the highest incoming interaction strength in patients with severe tuberculosis, with the main signals being MHC-I and LCK pathways.
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Affiliation(s)
- Li Wang
- Clinic and Research Center of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
- Department of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
| | - Ya He
- Clinic and Research Center of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
- Department of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
| | - Peng Wang
- Clinic and Research Center of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
- Department of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
| | - Hai Lou
- Clinic and Research Center of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
- Department of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China
| | - Haipeng Liu
- Central Laboratory, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.
| | - Wei Sha
- Clinic and Research Center of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China.
- Department of Tuberculosis, School of Medicine, Shanghai Pulmonary Hospital, Tongji University, Shanghai, China.
- Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.
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41
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Li X, Luo X, Wang B, Fu L, Chen X, Lu Y. Clofazimine inhibits innate immunity against Mycobacterium tuberculosis by NF-κB. mSphere 2024; 9:e0025424. [PMID: 39046230 PMCID: PMC11351037 DOI: 10.1128/msphere.00254-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Accepted: 06/20/2024] [Indexed: 07/25/2024] Open
Abstract
Tuberculosis (TB) remains one of the infectious diseases with high incidence and high mortality. About a quarter of the population has been latently infected with Mycobacterium tuberculosis. At present, the available TB treatment strategies have the disadvantages of too long treatment duration and serious adverse reactions. The sustained inflammatory response leads to permanent tissue damage. Unfortunately, the current selection of treatment regimens does not consider the immunomodulatory effects of various drugs. In this study, we preliminarily evaluated the effects of commonly used anti-tuberculosis drugs on innate immunity at the cellular level. The results showed that clofazimine (CFZ) has a significant innate immunosuppressive effect. CFZ significantly inhibited cytokines and type I interferons (IFNα and IFNβ) expression under both lipopolysaccharide stimulation and CFZ-resistant strain infection. In further mechanistic studies, CFZ strongly inhibited the phosphorylation of nuclear factor kappa B (NF-κB) p65 and had no significant effect on the phosphorylation of p38. In conclusion, our study found that CFZ suppresses innate immunity against Mycobacterium tuberculosis by NF-κB, which should be considered in future regimen development. IMPORTANCE The complete elimination of Mycobacterium tuberculosis (Mtb), the etiologic agent of TB, from TB patients is a complicated process that takes a long time. The excessive immune inflammatory response of the host for a long time causes irreversible organic damage to the lungs and liver. Current antibiotic-based treatment options involve multiple complex drug combinations, often targeting different physiological processes of Mtb. Given the high incidence of post-tuberculosis lung disease, we should also consider the immunomodulatory properties of other drugs when selecting drug combinations.
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Affiliation(s)
- Xinda Li
- Department of Pharmacology, Beijing Chest Hospital, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Drug Resistance Tuberculosis Research, Beijing Tuberculosis and Thoracic Tumor Research Institute, Beijing, China
| | - Xiaoyi Luo
- Department of Pharmacology, Beijing Chest Hospital, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Drug Resistance Tuberculosis Research, Beijing Tuberculosis and Thoracic Tumor Research Institute, Beijing, China
| | - Bin Wang
- Department of Pharmacology, Beijing Chest Hospital, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Drug Resistance Tuberculosis Research, Beijing Tuberculosis and Thoracic Tumor Research Institute, Beijing, China
| | - Lei Fu
- Department of Pharmacology, Beijing Chest Hospital, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Drug Resistance Tuberculosis Research, Beijing Tuberculosis and Thoracic Tumor Research Institute, Beijing, China
| | - Xi Chen
- Department of Pharmacology, Beijing Chest Hospital, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Drug Resistance Tuberculosis Research, Beijing Tuberculosis and Thoracic Tumor Research Institute, Beijing, China
| | - Yu Lu
- Department of Pharmacology, Beijing Chest Hospital, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Drug Resistance Tuberculosis Research, Beijing Tuberculosis and Thoracic Tumor Research Institute, Beijing, China
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42
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Mobed A, Alivirdiloo V, Gholami S, Moshari A, Mousavizade A, Naderian R, Ghazi F. Nano-Medicine for Treatment of Tuberculosis, Promising Approaches Against Antimicrobial Resistance. Curr Microbiol 2024; 81:326. [PMID: 39182006 DOI: 10.1007/s00284-024-03853-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Accepted: 08/16/2024] [Indexed: 08/27/2024]
Abstract
Even though the number of effective anti-tuberculosis or anti-mycobacterial agents is increasing, a large number of patients experience severe side effects as a result of these drugs. This hurts the patients' well-being and quality of life. Tumor cells that survive treatment modalities can become chemotherapy resistant at the molecular level. Furthermore, negative effects on normal cells occur concurrently. Strategies that minimize the negative effects on normal cells while efficiently targeting infected cells are required. Nanotherapies, according to recent research, may be one option in this direction. The present study differs from previously published review studies as it concentrates on examining the most recently developed nanoparticles for anti-mycobacterial purposes. Such novel approaches have the potential to reduce harmful side effects and improve patients' health prognoses. Current paper provides a comprehensive analysis of recent advances in nanotherapy systems for the pulmonary delivery of anti-tuberculous drugs. In addition, to low-priced and convenient alternatives for pulmonary delivery, different types of NPs for oral and topical application were also deliberated and summarized in this review.
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Affiliation(s)
- Ahmad Mobed
- Department of Community Medicine, Faculty of Medicine, Social Determinants of Health Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.
| | - Vahid Alivirdiloo
- Medical Doctor Ramsar Campus, Mazandaran University of Medical Sciences, Ramsar, Iran
| | - Sarah Gholami
- Young Researchers and Ellie Club, Babol Branch. Islamic Azad University, Babol, Iran
| | | | | | - Ramtin Naderian
- Student Committee of Medical Education Development, Education Development Center, Semnan University of Medical Science, Semnan, Iran
- Student Research Committee, Semnan University of Medical Sciences, Semnan, Iran
| | - Farhood Ghazi
- Stem Cell Research Center, Tabriz University of Medical Sciences, Tabriz, Iran
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43
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Darr CM, Hasan J, Mathai CJ, Gangopadhyay K, Gangopadhyay S, Bok S. Hybrid Polystyrene-Plasmonic Systems as High Binding Density Biosensing Platforms. Int J Mol Sci 2024; 25:8603. [PMID: 39201289 PMCID: PMC11354982 DOI: 10.3390/ijms25168603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Revised: 08/04/2024] [Accepted: 08/05/2024] [Indexed: 09/02/2024] Open
Abstract
Sensitive, accurate, and early detection of biomarkers is essential for prompt response to medical decisions for saving lives. Some infectious diseases are deadly even in small quantities and require early detection for patients and public health. The scarcity of these biomarkers necessitates signal amplification before diagnosis. Recently, we demonstrated single-molecule-level detection of tuberculosis biomarker, lipoarabinomannan, from patient urine using silver plasmonic gratings with thin plasma-activated alumina. While powerful, biomarker binding density was limited by the surface density of plasma-activated carbonyl groups, that degraded quickly, resulting in immediate use requirement after plasma activation. Therefore, development of stable high density binding surfaces such as high binding polystyrene is essential to improving shelf-life, reducing binding protocol complexity, and expanding to a wider range of applications. However, any layers topping the plasmonic grating must be ultra-thin (<10 nm) for the plasmonic enhancement of adjacent signals. Furthermore, fabricating thin polystyrene layers over alumina is nontrivial because of poor adhesion between polystyrene and alumina. Herein, we present the development of a stable, ultra-thin polystyrene layer on the gratings, which demonstrated 63.8 times brighter fluorescence compared to commercial polystyrene wellplates. Spike protein was examined for COVID-19 demonstrating the single-molecule counting capability of the hybrid polystyrene-plasmonic gratings.
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Affiliation(s)
- Charles M. Darr
- Department of Chemical and Biomedical Engineering, University of Missouri, Columbia, MO 65211, USA
| | - Juiena Hasan
- Department of Electrical and Computer Engineering, University of Denver, Denver, CO 80210, USA
| | - Cherian Joseph Mathai
- Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO 65211, USA
| | - Keshab Gangopadhyay
- Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO 65211, USA
| | - Shubhra Gangopadhyay
- Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO 65211, USA
| | - Sangho Bok
- Department of Electrical and Computer Engineering, University of Denver, Denver, CO 80210, USA
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Fuchs I, Losev Y, Mor Z, Rubinstein M, Polyakov M, Wagner T, Gobay T, Bayene E, Mula G, Kaidar-Shwartz H, Dveyrin Z, Rorman E, Kaliner E, Perl SH. Multidisciplinary Effort Leading to Effective Tuberculosis Community Outbreak Containment in Israel. Microorganisms 2024; 12:1592. [PMID: 39203435 PMCID: PMC11356750 DOI: 10.3390/microorganisms12081592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2024] [Revised: 07/29/2024] [Accepted: 07/31/2024] [Indexed: 09/03/2024] Open
Abstract
Tuberculosis (TB) is the second-most prevalent cause of mortality resulting from infectious diseases worldwide. It is caused by bacteria belonging to the Mycobacterium tuberculosis complex (MTBC). In Israel, TB incidence is low, acknowledged by the WHO as being in a pre-elimination phase. Most cases occur among immigrants from high TB incidence regions like the Horn of Africa and the former Soviet Union (FSU), with occasional outbreaks. The outbreak described in this report occurred between 2018 and 2024, increasing the incidence rate of TB in the region. Control of this outbreak posed challenges due to factors including a diverse population (including Ethiopian immigrants, Israeli-born citizens, and immigrants from other countries), economic and social barriers, and hesitancy to disclose information. The unique multidisciplinary team formed to address these challenges, involving the local TB clinic, district health ministry, health maintenance organization (HMO) infectious disease consultant, neighborhood clinic, and National Mycobacterium Reference Laboratory (NMRL), achieved effective treatment and containment. Whole genome sequencing (WGS) proved pivotal in unraveling patient connections during the outbreak. It pinpointed those patients overlooked in initial field investigations, established connections between patients across different health departments, and uncovered the existence of two distinct clusters with separate transmission chains within the same neighborhood. This study underscores collaborative efforts across sectors that successfully contained a challenging outbreak.
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Affiliation(s)
- Inbal Fuchs
- Clalit Health Services, Central District, Rishon LeTsiyon 7528809, Israel; (I.F.); (E.B.); (G.M.)
| | - Yelena Losev
- National Mycobacterium Reference Center, Ministry of Health, Tel Aviv 6810416, Israel; (Y.L.); (H.K.-S.)
| | - Zohar Mor
- Department of Tuberculosis and AIDS, Ministry of Health, Jerusalem 9438317, Israel; (Z.M.); (T.W.)
| | - Mor Rubinstein
- National Public Health Laboratories, Ministry of Health, Tel Aviv 6810416, Israel; (M.R.); (Z.D.)
| | - Marina Polyakov
- Central District Department of Health, Ministry of Health, Ramla 7243003, Israel; (M.P.); (T.G.); (E.K.)
| | - Tali Wagner
- Department of Tuberculosis and AIDS, Ministry of Health, Jerusalem 9438317, Israel; (Z.M.); (T.W.)
| | - Tamar Gobay
- Central District Department of Health, Ministry of Health, Ramla 7243003, Israel; (M.P.); (T.G.); (E.K.)
| | - Ester Bayene
- Clalit Health Services, Central District, Rishon LeTsiyon 7528809, Israel; (I.F.); (E.B.); (G.M.)
| | - Gila Mula
- Clalit Health Services, Central District, Rishon LeTsiyon 7528809, Israel; (I.F.); (E.B.); (G.M.)
| | - Hasia Kaidar-Shwartz
- National Mycobacterium Reference Center, Ministry of Health, Tel Aviv 6810416, Israel; (Y.L.); (H.K.-S.)
| | - Zeev Dveyrin
- National Public Health Laboratories, Ministry of Health, Tel Aviv 6810416, Israel; (M.R.); (Z.D.)
| | - Efrat Rorman
- Ministry of Health Laboratories Department, Ministry of Health, Jerusalem 9134302, Israel;
| | - Ehud Kaliner
- Central District Department of Health, Ministry of Health, Ramla 7243003, Israel; (M.P.); (T.G.); (E.K.)
| | - Sivan Haia Perl
- Department of Tuberculosis and AIDS, Ministry of Health, Jerusalem 9438317, Israel; (Z.M.); (T.W.)
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45
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Wang J, Cao H, Xie Y, Xu Z, Li Y, Luo H. Mycobacterium tuberculosis infection induces a novel type of cell death: Ferroptosis. Biomed Pharmacother 2024; 177:117030. [PMID: 38917759 DOI: 10.1016/j.biopha.2024.117030] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Revised: 06/20/2024] [Accepted: 06/21/2024] [Indexed: 06/27/2024] Open
Abstract
Ferroptosis is a lipid peroxidation-driven and iron-dependent form of programmed cell death, which is involved in a variety of physical processes and multiple diseases. Numerous reports have demonstrated that ferroptosis is closely related to the pathophysiological processes of Mycobacterium tuberculosis (M. tuberculosis) infection and is characterized by the accumulation of excess lipid peroxides on the cell membrane. In this study, the various functions of ferroptosis, and the therapeutic strategies and diagnostic biomarkers of tuberculosis, were summarized. Notably, this review provides insights into the molecular mechanisms and functions of M. tuberculosis-induced ferroptosis, suggesting potential future therapeutic and diagnostic markers for tuberculosis.
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Affiliation(s)
- Jianjun Wang
- Department of Clinical Laboratory, Kunshan Hospital Affiliated to Jiangsu University, Suzhou 215300, PR China
| | - Hui Cao
- Department of Food and Nutrition Safety, Jiangsu Provincial Center for Disease Control and Prevention, Nanjing, Jiangsu 210009, PR China
| | - Yiping Xie
- Department of Clinical Laboratory, Kunshan Hospital Affiliated to Jiangsu University, Suzhou 215300, PR China
| | - Zi Xu
- Department of Clinical Laboratory, Kunshan Hospital Affiliated to Jiangsu University, Suzhou 215300, PR China
| | - Yujie Li
- Department of Clinical Laboratory, Kunshan Hospital Affiliated to Jiangsu University, Suzhou 215300, PR China
| | - Hao Luo
- Department of Clinical Laboratory, The Second People's Hospital of Kunshan, Suzhou, China.
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Farman M, Shehzad A, Nisar KS, Hincal E, Akgul A. A mathematical fractal-fractional model to control tuberculosis prevalence with sensitivity, stability, and simulation under feasible circumstances. Comput Biol Med 2024; 178:108756. [PMID: 38901190 DOI: 10.1016/j.compbiomed.2024.108756] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2024] [Revised: 06/11/2024] [Accepted: 06/12/2024] [Indexed: 06/22/2024]
Abstract
BACKGROUND Tuberculosis, a global health concern, was anticipated to grow to 10.6 million new cases by 2021, with an increase in multidrug-resistant tuberculosis. Despite 1.6 million deaths in 2021, present treatments save millions of lives, and tuberculosis may overtake COVID-19 as the greatest cause of mortality. This study provides a six-compartmental deterministic model that employs a fractal-fractional operator with a power law kernel to investigate the impact of vaccination on tuberculosis dynamics in a population. METHODS Some important characteristics, such as vaccination and infection rate, are considered. We first show that the suggested model has positive bounded solutions and a positive invariant area. We evaluate the equation for the most important threshold parameter, the basic reproduction number, and investigate the model's equilibria. We perform sensitivity analysis to determine the elements that influence tuberculosis dynamics. Fixed-point concepts show the presence and uniqueness of a solution to the suggested model. We use the two-step Newton polynomial technique to investigate the effect of the fractional operator on the generalized form of the power law kernel. RESULTS The stability analysis of the fractal-fractional model has been confirmed for both Ulam-Hyers and generalized Ulam-Hyers types. Numerical simulations show the effects of different fractional order values on tuberculosis infection dynamics in society. According to numerical simulations, limiting contact with infected patients and enhancing vaccine efficacy can help reduce the tuberculosis burden. The fractal-fractional operator produces better results than the ordinary integer order in the sense of memory effect at diffract fractal and fractional order values. CONCLUSION According to our findings, fractional modeling offers important insights into the dynamic behavior of tuberculosis disease, facilitating a more thorough comprehension of their epidemiology and possible means of control.
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Affiliation(s)
- Muhammad Farman
- Faculty of Arts and Sciences, Department of Mathematics, Near East University, Northern Cyprus, Turkey; Department of Computer Science and Mathematics, Lebanese American University, 1107-2020, Beirut, Lebanon.
| | - Aamir Shehzad
- Mathematics Research Center, Near East University, Nicosia, North Cyprus, 99138, Turkey
| | - Kottakkaran Sooppy Nisar
- Department of Mathematics, College of Science and Humanities, Prince Sattam bin Abdulaziz University, Alkharj, Saudi Arabia
| | - Evren Hincal
- Mathematics Research Center, Near East University, Nicosia, North Cyprus, 99138, Turkey
| | - Ali Akgul
- Faculty of Arts and Sciences, Department of Mathematics, Siirt University, Turkey
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Kudu E, Danış F. Recognizing and addressing the challenges of gastrointestinal tuberculosis. World J Clin Cases 2024; 12:3648-3653. [PMID: 38994296 PMCID: PMC11235435 DOI: 10.12998/wjcc.v12.i19.3648] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Revised: 04/19/2024] [Accepted: 05/09/2024] [Indexed: 06/29/2024] Open
Abstract
In this editorial, we comment on the article by Ali et al published in the recent issue of the World Journal of Clinical Cases. This case report shed light on a particularly rare manifestation of this disease-primary gastrointestinal tuberculosis (GTB) presenting as gastric outlet obstruction. GTB presents diagnostic challenges due to its nonspecific symptoms and lack of highly accurate diagnostic algorithms. This editorial synthesizes epidemiological data, risk factors, pathogenesis, clinical presentations, diagnostic methods, and therapies to raise awareness about GTB. GTB constitutes 1%-3% of all tuberculosis cases globally, with 6%-38% of patients also having pulmonary tuberculosis. Pathogenesis involves various modes of Mycobacterium tuberculosis complex entry into the gastrointestinal system, with the terminal ileum and ileocecal valve commonly affected. Clinical presentation varies, often resembling other intra-abdominal pathologies, necessitating a high index of suspicion. Diagnostic tools include a combination of biochemical, microbiological, radiological, and endoscopic assessments. Anti-tubercular medication remains the cornerstone of treatment, supplemented by surgical intervention in severe cases. Multidisciplinary management involving gastroenterologists, surgeons, pulmonologists, and infectious disease specialists is crucial for optimal outcomes. Despite advancements, timely diagnosis and management challenges persist, underscoring the need for continued research and collaboration in addressing primary GTB.
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Affiliation(s)
- Emre Kudu
- Emergency Medicine, Marmara University Pendik Training and Research Hospital, İstanbul 34899, Türkiye
| | - Faruk Danış
- Emergency Medicine, Bolu Abant İzzet Baysal University Medical School, Bolu 14000, Türkiye
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48
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Liu P, Gu H, Cai G, Qin Y. A new nomogram based on ultrasound and clinical features for distinguishing epididymal tuberculosis and nontuberculous epididymitis. Sci Rep 2024; 14:15104. [PMID: 38956255 PMCID: PMC11220132 DOI: 10.1038/s41598-024-65682-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Accepted: 06/24/2024] [Indexed: 07/04/2024] Open
Abstract
Using ultrasound findings and clinical characteristics, we constructed and validated a new nomogram for distinguishing epididymal tuberculosis from nontuberculous epididymitis, both of which share similar symptoms. We retrospectively examined data of patients with epididymal tuberculosis and nontuberculous epididymitis hospitalized between January 1, 2013, and March 31, 2023. Eligible patients were randomly assigned to derivation and validation cohorts (ratio, 7:3). We drew a nomogram to construct a diagnostic model through multivariate logistic regression and visualize the model. We used concordance index, calibration plots, and decision curve analysis to assess the discrimination, calibration, and clinical usefulness of the nomogram, respectively. In this study, 136 participants had epididymal tuberculosis and 79 had nontuberculous epididymitis. Five variables-C-reactive protein level, elevated scrotal skin temperature, nodular lesion, chronic infection, and scrotal skin ulceration-were significant and used to construct the nomogram. Concordance indices of the derivation and validation cohorts were 0.95 and 0.96, respectively (95% confidence intervals, 0.91-0.98 and 0.92-1.00, respectively). Decision curve analysis of this nomogram revealed that it helped differentiate epididymal tuberculosis from nontuberculous epididymitis. This nomogram may help clinicians distinguish between epididymal tuberculosis and nontuberculous epididymitis, thereby increasing diagnosis accuracy.
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Affiliation(s)
- Pengju Liu
- Department of Urology, Zhejiang Chinese Medicine and Western Medicine Integrated Hospital, 208 East Huancheng Road, Hangzhou, China
| | - Hai Gu
- Department of Urology, Zhejiang Chinese Medicine and Western Medicine Integrated Hospital, 208 East Huancheng Road, Hangzhou, China
| | - Guofeng Cai
- Department of Urology, Zhejiang Chinese Medicine and Western Medicine Integrated Hospital, 208 East Huancheng Road, Hangzhou, China
| | - Yong Qin
- Department of Urology, Zhejiang Chinese Medicine and Western Medicine Integrated Hospital, 208 East Huancheng Road, Hangzhou, China.
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49
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Gao Y, Shang B, He Y, Deng W, Wang L, Sui S. The mechanism of Gejie Zhilao Pill in treating tuberculosis based on network pharmacology and molecular docking verification. Front Cell Infect Microbiol 2024; 14:1405627. [PMID: 39015338 PMCID: PMC11250621 DOI: 10.3389/fcimb.2024.1405627] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2024] [Accepted: 06/17/2024] [Indexed: 07/18/2024] Open
Abstract
Introduction Gejie Zhilao Pill (GJZLP), a traditional Chinese medicine formula is known for its unique therapeutic effects in treating pulmonary tuberculosis. The aim of this study is to further investigate its underlying mechanisms by utilizing network pharmacology and molecular docking techniques. Methods Using TCMSP database the components, potential targets of GJZLP were identified. Animal-derived components were supplemented through the TCMID and BATMAN-TCM databases. Tuberculosis-related targets were collected from the TTD, OMIM, and GeneCards databases. The intersection target was imported into the String database to build the PPI network. The Metascape platform was employed to carry out Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. Heatmaps were generated through an online platform (https://www.bioinformatics.com.cn). Molecular docking was conducted between the core targets and core compounds to explore their binding strengths and patterns at the molecular level. Results 61 active ingredients and 118 therapeutic targets were identified. Quercetin, Luteolin, epigallocatechin gallate, and beta-sitosterol showed relatively high degrees in the network. IL6, TNF, JUN, TP53, IL1B, STAT3, AKT1, RELA, IFNG, and MAPK3 are important core targets. GO and KEGG revealed that the effects of GJZLP on tuberculosis mainly involve reactions to bacterial molecules, lipopolysaccharides, and cytokine stimulation. Key signaling pathways include TNF, IL-17, Toll-like receptor and C-type lectin receptor signaling. Molecular docking analysis demonstrated a robust binding affinity between the core compounds and the core proteins. Stigmasterol exhibited the lowest binding energy with AKT1, indicating the most stable binding interaction. Discussion This study has delved into the efficacious components and molecular mechanisms of GJZLP in treating tuberculosis, thereby highlighting its potential as a promising therapeutic candidate for the treatment of tuberculosis.
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Affiliation(s)
- Yuhui Gao
- Emergency Department, The Second Affiliated Hospital, Dalian Medical University, Dalian, Liaoning, China
| | - Bingbing Shang
- Emergency Department, The Second Affiliated Hospital, Dalian Medical University, Dalian, Liaoning, China
| | - Yanyao He
- Research and Teaching Department of Comparative Medicine, Dalian Medical University, Dalian, Liaoning, China
| | - Wen Deng
- Research and Teaching Department of Comparative Medicine, Dalian Medical University, Dalian, Liaoning, China
| | - Liang Wang
- Research and Teaching Department of Comparative Medicine, Dalian Medical University, Dalian, Liaoning, China
| | - Shaoguang Sui
- Emergency Department, The Second Affiliated Hospital, Dalian Medical University, Dalian, Liaoning, China
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Singhal L, Gupta P, Aysha K N, Gupta V. Insights into changing patterns of extrapulmonary tuberculosis in North India. Indian J Med Microbiol 2024; 50:100657. [PMID: 38944276 DOI: 10.1016/j.ijmmb.2024.100657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 05/17/2024] [Accepted: 06/23/2024] [Indexed: 07/01/2024]
Abstract
PURPOSE Tuberculosis is one of the dreadful infections and India contributes to substantial burden of TB cases globally. Though majority of cases are pulmonary, extra-pulmonary tuberculosis (EPTB) share significant burden, more in HIV-positive persons. Despite the striking burden, very few studies have been conducted in India and present study was undertaken to determine trends of EPTB at our tertiary care centre. METHODS This was a retrospective study conducted over a period of 4 years 3 months. Diagnosis of EPTB was based on suspected clinical features, with positive micobiological evidence with cartridge based nucleic acid amplification test (CBNAAT) with/without microscopy. RESULTS A total of 10,560 samples (pulmonary and extra-pulmonary) were received during the study period, of which 3972 were extrapulmonary. Of these, a total of 18% were noted to be positive for EPTB. Trend of positivity revealed highest burden in 2018 and a decline was noted over the years, however, rise in cases was noted in 2022. Pleural, meningitis, musculoskeletal, peritoneal and pericardial TB was more common in males, while lymphadenitis was more common in females (p value: <0.0001). Pleural TB (31%) was the most common presentation, followed by lymphadenitis. A gradual decline in lymphadenitis was noted with significantly increasing trend only for musculoskeletal TB. Rifampicin resistance was detected in 7.45% of positive samples, of which the maximum rate of resistance was noted in lymph node aspirates (11.11%), followed by musculoskeletal and pleural samples. CONCLUSION The present study showed a gradual decline in positivity of EPTB cases over the years. Younger productive age group with more propensity to transmit infection was the most commonly affected, with pleural TB as the most common presentation. Rare presentations of EPTB also contributed major share. Higher rates of resistance underline requisite to strengthen ongoing programs, to achieve the End TB strategy by 2025.
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Affiliation(s)
| | | | | | - Varsha Gupta
- Department of Microbiology, GMCH-32, Chandigarh, India.
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