Basic Study
Copyright ©The Author(s) 2020.
World J Gastrointest Oncol. Sep 15, 2020; 12(9): 975-991
Published online Sep 15, 2020. doi: 10.4251/wjgo.v12.i9.975
Table 1 Nine prognosis-associated genes for establishing the risk score system
Gene symbolDescriptionCoefHR95%CIP value
COL8A1Collagen type VIII alpha 1 chain-0.391340.67610.4974-0.91910.01247a
CTHRC1Collagen triple helix repeat containing 10.364701.44011.1432-1.81400.00196a
COL5A2Collagen type V alpha 2 chain0.455501.57700.9116-2.72780.10329
AADACArylacetamide deacetylase0.148231.15981.0437-1.28870.00585a
MAMDC2MAM domain containing 20.210341.23411.0514-1.44850.01006a
SERPINE1Serpin family E member 10.231831.26091.0583-1.50230.00949a
MAOAMonoamine oxidase A0.170861.18631.0151-1.38650.03172a
COL1A2Collagen type I alpha 2 chain-0.541040.58210.3462-0.97900.04135a
FNDC1Fibronectin type III domain containing 10.232641.26190.9808-1.62360.07041
Table 2 Results of connectivity map analysis
RankCMap namemeannEnrichmentP valueSpecificityPercent non-null
1Trichostatin A-0.344182-0.364< 0.0010.554550
2Thiamphenicol-0.4695-0.780.0010.033360
3Vorinostat0.419120.5180.0020.422166
4Levomepromazine-0.2454-0.8140.0020.009450
5Lasalocid-0.2994-0.7890.0040.046350
6Clorsulon-0.3034-0.760.0070.028450
7Prestwick-1103-0.2994-0.7590.0070.039750
8Aminobenzenesulfonamide-0.3894-0.7120.0140.048650
9Digoxigenin-0.3935-0.6250.0190.107160
10Disulfiram-0.4045-0.6160.0230.093560