Basic Study
Copyright ©The Author(s) 2015.
World J Gastroenterol. Sep 21, 2015; 21(35): 10091-10103
Published online Sep 21, 2015. doi: 10.3748/wjg.v21.i35.10091
Table 1 Compositions of AIN-76 and broccoli sprout diet
IngredientsControl diet (AIN-76)BSEx diet
Casein25.00%25.00%
Cornstarch40.10%33.86%
Sucrose20.00%20.00%
Corn oil5.00%5.00%
Mineral mixture3.50%3.50%
Vitamin mixture1.00%1.00%
Choline bitartrate0.40%0.40%
Cellulose5.00%5.00%
BSEx
Glucoraphanin-0.34%
Others-5.90%
Table 2 Primers used for real-time polymerase chain reaction analysis
Gene symbolSequence (5'→3')
Rpl10aForwardGAAGAAGGTGCTGTGTTTGGC
ReverseTCGGTCATCTTCACGTGGC
ArbpForwardGGCGACCTGGAAGTCCAACTA
ReverseCATTGTCTGCTCCCACAATGAA
Rpl15ForwardGCTTTAGTAGCAGCTGGTGTGTGA
ReverseACCCAAGACGAATTGATTGGAA
Rps16ForwardTCCAAGGGTCCGCTGCAGTC
ReverseCGTTCACCTTGATGAGCCCATT
Rpl3ForwardTGTATTGGAGCTTGGCATCCTG
ReverseACCATCCTTGATGAGGTAGCCTTG
Rps18ForwardAAGTTTCAGCACATCCAGCGAGTA
ReverseTTGGTGAGGTCAATGTCTGCTTTC
Rps3ForwardGATCATGTGAGCATTGTGGAACCTA
ReverseCTCCAGATGCAGCTGCCAAG
Cyp1a2ForwardTCAACCTCGTGAAGAGCAGCA
ReverseGTCCTGGATACTGTTCTTGTTGAAGTC
Gstm1ForwardTTCGTGCAGACATTGTGGAGA
ReverseCTTGCCCAGGAACTCAGAGTAGA
GclcForwardGTGGACACCCGATGCAGTATTC
ReverseCATCCACCTGGCAACAGTCATTAG
Gsta3ForwardAATAGGCTGAGCAGGGCTGATG
ReverseGGTTGCTGACTCTGGTTCTCAGG
Gstt3ForwardATGCCTTTGCCCAGGTGAAC
ReverseGTGTGCTGCCAAGCCAGGTA
Gstp1ForwardGAGGACCTTCGATGCAAATATGGTA
ReverseCTGGGACAGCAGGGTCTCAA
Table 3 Significantly enriched Kyoto Encyclopedia of Genes and Genomes pathway found in the differentially expressed genes by broccoli sprout extract (P < 0.05)
KEGG IDPathwayFDR-corrected P value
Up-regulatedrno03010Ribosome3.97 × 10-43
rno00980Metabolism of xenobiotics by cytochrome P4500.001186149
rno00982Drug metabolism0.004009591
Down-regulatedrno00071Fatty acid metabolism2.42 × 10-17
rno03320PPAR signaling pathway2.42 × 10-12
rno00280Valine, leucine and isoleucine degradation5.75 × 10-8
rno00620Pyruvate metabolism8.79 × 10-7
rno01040Biosynthesis of unsaturated fatty acids8.34 × 10-7
rno00650Butanoate metabolism1.21 × 10-6
rno00830Retinol metabolism5.97 × 10-6
rno00982Drug metabolism7.15 × 10-6
rno00640Propanoate metabolism1.06 × 10-5
rno00020Citrate cycle (TCA cycle)4.94 × 10-5
rno00120Primary bile acid biosynthesis5.63 × 10-5
rno00140Steroid hormone biosynthesis7.09 × 10-4
rno00561Glycerolipid metabolism7.78 × 10-4
rno00010Glycolysis/gluconeogenesis0.003660561
rno00380Tryptophan metabolism0.003952492
rno00983Drug metabolism0.004286518
rno00500Starch and sucrose metabolism0.009275005
rno00980Metabolism of xenobiotics by cytochrome P4500.024561245
Table 4 Significant canonical pathways (P < 0.05) in upregulated genes induced by broccoli sprout extract
Ingenuity canonical pathways-log(B-H P value)RatioMolecules
EIF2 signaling22.50.1830RPL18, RPL14, RPLP0, RPL7, Rpl7a, RPL41, RPS4X, RPS12, RPL22L1, RPL31, RPS26, RPS13, RPL15, RPS16, RPS7, RPS19, RPS6, RPS15A, RPL11, RPS2, RPS5, RPL26, RPS18, RPL34, RPSA, RPL13, Gm11425, RPS9, RPS3, RPS23, RPL23A, RPL27A, RPS8, RPL18A, RPS11, RPL3, RPLP2
Regulation of eIF4 and p70S6K Signaling7.570.1150RPS18, RPS12, RPS4X, RPS26, RPS13, RPSA, RPS3, RPS16, RPS9, RPS7, RPS23, PPP2CA, RPS19, RPS6, RPS8, ITGB1, RPS15A, RPS11, RPS2, RPS5
mTOR Signaling6.490.1000RND3, RPS18, RPS12, RPS4X, HMOX1, RPS26, RPS13, RPSA, RPS3, RPS16, RPS9, RPS7, RPS23, PPP2CA, RPS19, RPS6, RPS8, RPS15A, RPS11, RPS2, RPS5
Nrf2-mediated oxidative stress response3.850.0890GPX2, GSTM5, ACTG1, AKR1A1, GCLC, HSPB8, GSTP1, GSTA1, HMOX1, GSTM1, FTL, JUN, EPHX1, NFE2L2, AKR7A3, ACTB, NQO1
Metabolism of xenobiotics by cytochrome P4503.840.0612GSTM5, GSTM1, Gstt3, CYP2B6, AKR1A1, UGT2B15, Cyp2c40, CYP1A2, GSTP1, GSTA1, AKR1C3, UGT2B4
Glutathione metabolism2.880.0899GPX2, GSTM5, GSTM1, Gstt3, GCLC, PRDX6, GSTP1, GSTA1
Arachidonic acid metabolism2.090.0485GPX2, LTC4S, CYP2B6, CYP4A22, PRDX6, PLA2G2A, Cyp2c40, PLA2G16, CYP1A2, AKR1C3
Acute phase response signaling2.000.0734APOA1, A2M, C4BPA, SERPINA3, RBP7, C4B, HMOX1, ORM1/ORM2, C4BPB, FTL, JUN, HP, HPX
B cell development1.780.1210HLA-DMA, HLA-DRB1, HLA-DRA, HLA-DMB
Aryl hydrocarbon receptor signaling1.720.0692HSPB1, GSTM5, GSTM1, MYC, RARB, JUN, NFE2L2, CYP1A2, GSTP1, NQO1, GSTA1
ERK/MAPK Signaling1.560.0588HSPB1, DUSP1, MYC, YWHAZ, PPP2CA, PRKAR2A, YWHAG, DUSP6, PLA2G2A, ITGB1, PPP1R3C, ETS1
Xenobiotic metabolism signaling1.560.0508GSTM5, CYP2B6, GCLC, UGT2B15, CYP1A2, GSTP1, GSTA1, HMOX1, GSTM1, FTL, PPP2CA, NFE2L2, FMO5, NQO1, UGT2B4
Eicosanoid signaling1.560.0759LTC4S, PTGER3, PRDX6, PLA2G2A, PLA2G16, AKR1C3
Complement system1.560.1430C4BPB, C6, C4BPA, C4B, C1QB
Pentose and glucuronate interconversions1.560.0352AKR1A1, UGT2B15, AKR7A3, AKR1C3, UGT2B4
Table 5 Relative mRNA levels of genes related to ribosome and xenobiotic/glutathione metabolism in the rat liver
Gene symbolFDR-corrected P valueControl
BSEx
MeanSDMeanSD
Ribosome
Rpl10a0.00181.000.060.82b0.05
Arbp0.00561.000.130.860.24
Rpl150.00581.000.140.800.23
Rps160.00581.000.110.75a0.18
Rpl30.00681.000.121.070.20
Rps180.00861.000.061.000.17
Rps30.00961.000.051.34a0.27
Xenobiotic/glutathione metabolism
Cyp1a2< 0.00011.000.322.43b0.66
Gstm1< 0.00011.000.131.230.30
Gclc0.00141.000.061.32a0.23
Gsta30.00181.000.131.58a0.43
Gstt30.00181.000.191.030.05
Gstp10.02871.000.140.940.30
Table 6 Hepatoprotective effects of broccoli sprout extract on APAP-induced liver injury
MarkerControl
BSEx
APAP
APAP + BSEx
MeanSDMeanSDMeanSDMeanSD
Body weight (g)188.4510.38190.9011.36172.399.91183.638.87
Body weight gain after i.p (g)3.881.773.591.53-11.21a3.30-1.05b2.84
Liver weight (g)8.460.449.130.696.90a0.588.11d0.85
Liver/body0.0450.0010.0480.0020.04a0.0020.044d0.003
AST (IU/L)71.416.9959.988.465614.41a1997.8370.9115.74
ALT (IU/L)12.510.579.811.841297.71a447.3311.782.08
GST activity (U/g tissue)61.784.9577.894.6251.90c16.8593.19b16.55
TBARS (μmol/g tissue)462.6836.57420.9523.66751.12a220.87496.6337.21
GSH (nmol/g tissue)2.730.262.990.291.66a0.592.610.75
Table 7 Hepatoprotective effects of broccoli sprout extract on D-GalN-induced liver injury
MarkerControl
BSEx
D-GalN
D-GalN + BSEx
MeanSDMeanSDMeanSDMeanSD
Body weight (g)237.3110.49235.1316.38224.3011.14225.3910.76
Body weight gain after i.p (g)1.851.323.500.97-7.74a2.42-4.10b3.67
Liver weight (g)10.380.3211.161.257.40a0.608.32b1.33
Liver/body0.0440.0010.0480.0020.032a0.0010.036b0.005
AST (IU/L)55.738.6666.3024.0812465.63a3223.974820.05b3094.93
ALT (IU/L)11.121.0112.473.483936.46a777.521808.95b1014.04
GST activity (U/g tissue)87.9210.42109.4323.1953.15a8.1498.0415.75
TBARS (μmol/g tissue)418.9633.06442.3441.10543.81c45.35495.42d54.46