Rapid Communication
Copyright ©2007 Baishideng Publishing Group Inc.
World J Gastroenterol. Nov 14, 2007; 13(42): 5635-5641
Published online Nov 14, 2007. doi: 10.3748/wjg.v13.i42.5635
Table 1 Primer sequences used for RT-PCR
TargetPrimer sequenceProduct size (bp)
ACOF 5'-GAACTCCAGATAATTGGCACCTA-3'75
R 5'-AGTGGTTTCCAAGCCTCGAA-3'
CPT-1bF 5'-ATCATGTATCGCCGCAAACT-3'85
R 5'-CCATCTGGTAGGAGCACATGG-3'
CYP2B10F 5'-CAA TGGGGA ACG TTG GAA GA-3'176
R 5'-TGATGCACTGGAAGAGGA AC-3'
CYP3A11F 5'-CTCAATGGTGTGTATATCCCC-3'423
R 5'-CCGATGTTCTTAGACACTGCC-3'
CYP4A10F 5'-AGTGTCTCTGCTCTAAGCC-3'180
R 5'-CCCAAAGAACCAGTGAAA-3'
Ketoacyl thiolaseF 5'-GCATCCCAGAGACTGTACCTTT-3'202
R 5'-GTCTCTGGCCTTCTCGTTCT-3'
L-PBEF 5'-TGGCTCTTGGAGGAGGACTAG A-3'125
R 5'-AAGCTGCGTTCCTCTTGCA-3'
MPT-αF 5'-GGCAGTCTCAGTCGCTTCTC-3'240
R 5'-GCACTCCTGATTTGGTCGTT-3'
MPT-βF 5'-AGAGCTGCACTTTCGGGTTT-3'202
R 5'-CTGTGGTCATGGCTTGGTTT-3'
PPAR-αF 5'-GTACGGTGT GTATGAAGCCATCTT-3'76
R 5'-GCCGTACGCGATCAGCAT-3'
Urate oxidaseF 5'-ACCTCCCGTCATTCACTCT-3'438
R 5'-ACTGTCCCTGTTATTTTGCC-3'
Table 2 Effect of TCPOBOP on genes involved in fatty acid oxidation
Type of fatty acid oxidationGeneMCDMCD-TCPOBOPaFold-changeP value
ω-oxidationCYP4A101.40 ± 1.696.07 ± 1.734.30.001
(ER)CYP4A140.81 ± 0.040.07 ± 0.02-11.60.008
β-oxidationL-PBE0.07 ± 0.010.39 ± 0.015.60.0004
(peroxisome)Ketoacyl thiolase0.12 ± 0.030.28 ± 0.062.30.04
ACO0.25 ± 0.140.32 ± 0.081.3NS
Urate oxidase0.29 ± 0.020.16 ± 0.02-1.8NS
β-oxidationCPT10.79 ± 0.210.77 ± 0.19-1.0NS
(mitochondria)MTP-α0.60 ± 0.300.88 ± 0.711.5NS
MTP-β0.50 ± 0.400.59 ± 0.071.2NS