Expression patterns and action analysis of genes associated with physiological responses during rat liver regeneration: Cellular immune response

Table 1 Expression of 127 cellular immune response-associated genes during rat liver regeneration

Geneabbr.	Associatedwith others	Folddifference	Geneabbr.	Associatedwith others	Folddifference	GeneAbbr.	Associatedwith others	Folddifference	Geneabbr.	Associatedwith others	Folddifference
1 Antigen precessing, presentation			Igf1r		0.4	Tlr4	3	0.5	Gadd45g		8.0, 0.4
Cd3d	3	4.0, 0.4	1Igh-1a		0.3	Tnf	3	3.2	Il1rl2		3.2, 0.1
Cd3e	3	2.7	Il15		0.4	Tnfsf12		0.3	Il2	2	3.5, 0.3
Cd3g	3	0.2	1Il1b		0.4	1Tp53		2.9	Il4	2	2.6, 0.1
Csf2		0.3	Il2	3	3.5, 0.3	Traf1		0.4	Inha		0.2
Cx3cr1	3	6.8, 0.4	Il4	3	2.6, 0.1	Usf1		2.0, 0.5	Itgb1	1	2.6
Itgb1	3	2.6	Il6		6.1, 0.3	Usf2		3.3	Klrc2	2	2.3, 0.4
Lgals3bp	3	10.6	Irf1		0.3	Vipr1		2.3	Klrg1		0.4
Prkra		4.2, 0.1	Itgam		0.3	Xbp1		4.3, 0.3	Lgals3bp	1	10.6
Tap1	3	2.2	Itgb2		0.5	Zap70		0.4	Lsp1		0.3
Tlr2	3	10.6	Kdr		2.4, 0.4	3 Antigen elimination			Mif		3.2
Tnfrsf4	3	2.3, 0.3	Kit		0.4	Adm		8.0	Mnda		5.3, 0.5
2 T-cell activation, proliferation			Klrc2	3	2.3, 0.4	Adora2a		0.5	Muc1		6.8, 0.2
Ager	3	0.4	Map3k7		0.5	Ager	2	0.4	Ncf1		3.7, 0.2
Akt1		3.9	Mapk8		19.7, 0.5	App		6.4	Ocil		9.1, 0.1
Apoe		0.1	Mmp9		9.5, 0.5	Art2b		0.3	Pfn1		4.2
Arhgdib		13.0	Myd88		2.1	1Bcl10		2.3	Pla2g4a		2.0
B7h3		3.5	Nfatc1		0.3	Bdnf		2.6, 0.4	Plaur		13.9
1Bcl2		0.3	Nfkb1		2.3, 0.4	1C3ar1		2.3, 0.3	Pnliprp2		36.8, 0.5
Bcl2l1		2.1, 0.4	P2rx7		2.5, 0.4	1C5r1		2.6, 0.4	Prf1		0.2
1Bmi1		2.0	Pawr		0.3	Ccl17		0.1	Pten		0.5
Btk		2.0	Plau		3.0, 0.4	Ccr1		27.9, 0.4	Ptprc	2	3.0, 0.1
Card11		2.3, 0.2	Ppbp		2.1, 0.1	1Ccr6		4.3, 0.3	Rela	2	0.5
Cd244	3	0.3	Prkca		4.6	Cd244	2	0.3	Slc16a1		3.2
Cd80		3.0, 0.3	Prkcq		3.0, 0.4	Cd3d	1	4.0, 0.4	Sod2		5.6
1Cd86		2.6	Psme2		4.0	Cd3e	1	2.7	Spn	2	4.0, 0.2
Cebpg		0.4	Ptgs2		2.1, 0.1	Cd3g	1	0.2	Spp1		2.7, 0.5
Chuk		0.3	Ptk2b		3.6	Cfh		2.5	Tap1	1	2.2
Cxcl12		0.2	Ptprc	3	3.0, 0.1	Crhr1		3.8, 0.5	Tcrb	2	0.2
Ddx58		11.8	Rela	3	0.5	Csf2	1	0.3	Tcrg	2	0.3
Erbb2		0.1	Rhog		0.5	Ctgf		13.9	Tff1		0.1
1F3		2.0, 0.2	Socs1		2.4, 0.5	Ctse		0.4	Tgfb2		2.9, 0.5
Fcgr1		2.6	Socs3		2.5, 0.1	1Ctsk		10.3	Tlr4	2	0.5
Fyn		0.4	Spn	3	4.0, 0.2	Cx3cr1	1	6.8, 0.4	Tnf	2	3.2
Glmn		6.0, 0.4	Tcrb	3	0.2	E2f1		21.2	Tnfrsf4	1	2.3, 0.3
Gzmb		7.5	Tcrg	3	0.3	1Ebi3		0.2	Umod		3.0, 0.4
Icam1		3.0	Tert		5.3, 0.3	1F2		0.3	Zfp148		2.5
Ifng		6.5	Tgfb1		4.0	Fosl1		2.3

¹Reported genes associated with liver regeneration; Associated with others: involved in other process of cellular immune response.