Bioinformatics analysis of aberrantly methylated-differentially expressed genes and pathways in hepatocellular carcinoma

doi:10.3748/wjg.v24.i24.2605

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Jun 28, 2018; 24(24): 2605-2616
Published online Jun 28, 2018. doi: 10.3748/wjg.v24.i24.2605

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Figure 1 Flowchart of bioinformatics analysis. DMGs: Differentially methylated genes; DEGs: Differentially expressed genes; Hyper-LGs: Hypermethylated, lowly expressed genes; Hypo-HGs: Hypomethylated, highly expressed genes.

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Figure 2 Protein-protein interaction network of hypermethylated, lowly expressed genes. Disconnected nodes were hid in the network.

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Figure 3 Protein-protein interaction network of hypomethylated, highly expressed genes. Disconnected nodes were hid in the network.

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Figure 4 Hypermethylated, lowly expressed genes modules.

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Figure 5 Hypomethylated, highly expressed genes modules.

Citation: Sang L, Wang XM, Xu DY, Zhao WJ. Bioinformatics analysis of aberrantly methylated-differentially expressed genes and pathways in hepatocellular carcinoma. World J Gastroenterol 2018; 24(24): 2605-2616
URL: https://www.wjgnet.com/1007-9327/full/v24/i24/2605.htm
DOI: https://dx.doi.org/10.3748/wjg.v24.i24.2605