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Qiu F, Zhang R, Schwenkreis F, Legerlotz K. Predicting rheumatoid arthritis in the middle-aged and older population using patient-reported outcomes: insights from the SHARE cohort. Int J Med Inform 2025; 200:105915. [PMID: 40209390 DOI: 10.1016/j.ijmedinf.2025.105915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2025] [Revised: 04/04/2025] [Accepted: 04/07/2025] [Indexed: 04/12/2025]
Abstract
BACKGROUND In light of global population aging and the increasing prevalence of Rheumatoid Arthritis (RA) with age, strategies are needed to address this public health challenge. Machine learning (ML) may play a vital role in early identification of RA, allowing an early start of treatment, thereby reducing costs. This study aims first to identify potential variables related to RA, and second to explore and evaluate the potential of ML to identify RA patients in people over 50 years. METHOD We developed ML predictive models (lightGBM, logistic regression, k nearest neighbor, naive Bayes, random forrest, and XGBoost) using patient-reported outcomes collected from the SHARE database (7th and 9th wave). RESULTS Difficulties in daily life such as stooping and pulling are risk factors for RA. Lifestyle activities participation is negatively associated with RA. ML models performed differently with the lightGBM model achieving the highest AUC (0.748, 95 % CI: 0.739-0.758), and logistic regression and lightGBM showing the highest accuracy at 0.902. The sensitivity of naive Bayes was highest at 0.442. Significant differences were observed in the Hosmer-Lemeshow test (P < 0.05). CONCLUSION The predictive models based on patient-reported outcome measures achieved fair performance with limited potential to early identify RA patients. Lifestyle activities and difficulties in daily life were associated with risk of RA and should be considered in anamnesis.
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Affiliation(s)
- Fanji Qiu
- Movement Biomechanics, Institute of Sport Sciences, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany.
| | - Rongrong Zhang
- School of Control and Computer Engineering, North China Electric Power University, 102206 Beijing, China
| | - Friedemann Schwenkreis
- Department of Business Information Systems, Baden-Wuerttemberg Cooperative State University Stuttgart, Paulinenstr. 50, 70178 Stuttgart, Germany
| | - Kirsten Legerlotz
- Movement Biomechanics, Institute of Sport Sciences, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany; Department of Movement and Training Sciences, Institute of Sport Sciences, University of Wuppertal, Gauss street 20, 42119 Wuppertal, Germany
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Masson L, Lorton F, Lependu J, Imbert BM, Vrignaud B, Gras-Le Guen C, Scherdel P. Development and Evaluation of a New Gastroenteritis Clinical Severity Score for Children Aged Under 5. Acta Paediatr 2025; 114:1456-1463. [PMID: 39846819 DOI: 10.1111/apa.17592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Revised: 10/14/2024] [Accepted: 01/10/2025] [Indexed: 01/24/2025]
Abstract
AIM To develop and internally validate a new severity score to more accurately assess the clinical severity forms of acute gastroenteritis (AGE) in children from birth to age 5 years. METHODS We included children consulting for AGE in the emergency department of the University Hospital of Nantes (March 2017-June 2019). We developed and evaluated a new predictive score (GASTROVIM score) using the classification and regression trees. We compared its diagnostic performance with the two existing scores: the Vesikari score and clinical dehydration scale (CDS). A clinical expert a posteriori evaluated children's medical records to determine the severity form of AGE as the gold standard. RESULTS Of the 200 children included, 129 (64.5%) had severe forms of AGE according to the GASTROVIM score (maximal number of liquid stools and vomiting per day, weight loss and CDS), with sensitivity 90.0% (95% CI: 83.5-94.6) and specificity 82.9% (72.0-90.8). The Vesikari score had similar sensitivity (97.3%) but lower specificity (17.0%) and the CDS had lower sensitivity (28.3%) and higher specificity (100%) than the GASTROVIM score. CONCLUSION The GASTROVIM score could discriminate severe forms of AGE with good diagnostic performance. Nevertheless, external validation in other populations and/or other countries is needed.
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Affiliation(s)
- Lydie Masson
- Department of Pediatrics, University Hospital of Nantes, Nantes, France
| | - Fleur Lorton
- CHU Nantes, INSERM, Paediatric Emergency Department, Nantes Université, Nantes, France
| | - Jacques Lependu
- INSERM, CNRS, Immunology and New Concepts in Immunotherapy, UMR 1302/EMR6001, Nantes University, Nantes, France
| | | | | | | | - Pauline Scherdel
- INSERM, Clinical Research Department, University Hospital of Nantes, Nantes, France
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Kraler S, Mueller C, Libby P, Bhatt DL. Acute coronary syndromes: mechanisms, challenges, and new opportunities. Eur Heart J 2025:ehaf289. [PMID: 40358623 DOI: 10.1093/eurheartj/ehaf289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/06/2025] [Revised: 03/03/2025] [Accepted: 04/10/2025] [Indexed: 05/15/2025] Open
Abstract
Despite advances in research and patient management, atherosclerosis and its dreaded acute and chronic sequelae continue to account for one out of three deaths globally. The vast majority of acute coronary syndromes (ACS) arise from either plaque rupture or erosion, but other mechanisms, including calcific nodules, embolism, spontaneous coronary artery dissection, coronary spasm, and microvascular dysfunction, can also cause ACS. This ACS heterogeneity necessitates a paradigm shift in its management that extends beyond the binary interpretation of electrocardiographic and biomarker data. Indeed, given the evolution in the global risk factor profile, the increasing importance of previously underappreciated mechanisms, the evolving appreciation of sex-specific disease characteristics, and the advent of rapidly evolving technologies, a precision medicine approach is warranted. This review provides an update of the mechanisms of ACS, delineates the role of previously underappreciated contributors, discusses sex-specific differences, and explores novel tools for contemporary and personalized management of patients with ACS. Beyond mechanistic insights, it examines evolving imaging techniques, biomarkers, and regression- and machine learning-based approaches for the diagnosis (e.g. CoDE-ACS, MI3) and prognosis (e.g. PRAISE, GRACE, SEX-SHOCK scores) of ACS, along with their implications for future ACS management. A more individualized approach to patients with ACS is advocated, emphasizing the need for innovative studies on emerging technologies, including artificial intelligence, which may collectively facilitate clinical decision-making within a more mechanistic framework, thereby personalizing patient care and potentially improving long-term outcomes.
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Affiliation(s)
- Simon Kraler
- Center for Molecular Cardiology, University of Zurich, Schlieren, Switzerland
- Department of Cardiology and Internal Medicine, Cantonal Hospital Baden, Baden, Switzerland
| | - Christian Mueller
- Department of Cardiology and Cardiovascular Research Institute Basel, University Hospital Basel, Basel, Switzerland
- Department of Clinical Research, University of Basel, Basel, Switzerland
| | - Peter Libby
- Division of Cardiovascular Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA
| | - Deepak L Bhatt
- Mount Sinai Fuster Heart Hospital, Icahn School of Medicine at Mount Sinai, 1 Gustave Levy Place, Box 1030, New York, NY 10029, USA
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Lee H, Han JW, Suh SW, Yang HW, Oh DJ, Lim E, Shin J, Kim BJ, Lee DW, Kim JL, Jhoo JH, Park JH, Lee JJ, Kwak KP, Lee SB, Moon SW, Ryu SH, Kim SG, Kim KW. A sleep-based risk model for predicting dementia: Development and validation in a Korean cohort. J Alzheimers Dis 2025:13872877251340094. [PMID: 40336428 DOI: 10.1177/13872877251340094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/09/2025]
Abstract
BackgroundDementia is a major public health challenge, yet existing prediction models often overlook sleep-related symptoms, despite their known links to cognitive decline.ObjectiveTo develop and validate a four-year Dementia Risk Score (DRS) incorporating self-reported sleep-related symptoms with demographic and clinical factors to predict all-cause dementia, including Alzheimer's disease.MethodsData from 3082 Korean adults aged 60-79 years were analyzed. Predictors were selected using LASSO regression and included in a multivariate logistic regression model. A point-based scoring system, the DRS, was constructed from the model coefficients. Internal validation was conducted using bootstrapping and a separate dataset.ResultsThe DRS achieved robust predictive performance, with AUC values of 0.824 in the training set and 0.826 in the validation set. Key predictors included sleep disturbance, use of sleep medications, daytime dysfunction, leg discomfort, and urge to move legs.ConclusionsThe DRS provides a practical, scalable tool for predicting dementia risk, supporting community-based screening and early intervention. External validation is needed to confirm its broader applicability.
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Affiliation(s)
- Hyukjun Lee
- Department of Neuropsychiatry, Seoul National University Bundang Hospital, Seongnam, South Korea
| | - Ji Won Han
- Department of Neuropsychiatry, Seoul National University Bundang Hospital, Seongnam, South Korea
- Department of Psychiatry, Seoul National University, College of Medicine, Seoul, South Korea
| | | | - Hee Won Yang
- Department of Psychiatry, Chungnam National University Hospital, Daejeon, South Korea
| | - Dae Jong Oh
- Workplace Mental Health Institute, Kangbuk Samsung Hospital, Sungkyunkwan University School of Medicine, Seoul, South Korea
| | - Eunji Lim
- Department of Neuropsychiatry, Gyeongsang National University Changwon Hospital, Changwon, Republic of Korea
| | - Jin Shin
- Department of Neuropsychiatry, Seoul National University Bundang Hospital, Seongnam, South Korea
| | - Bong Jo Kim
- Department of Psychiatry, Gyeongsang National University, School of Medicine, Jinju, South Korea
| | - Dong Woo Lee
- Department of Neuropsychiatry, Inje University Sanggye Paik Hospital, Seoul, South Korea
| | - Jeong Lan Kim
- Department of Psychiatry, School of Medicine, Chungnam National University, Daejeon, South Korea
| | - Jin Hyeong Jhoo
- Department of Neuropsychiatry, Kangwon National University Hospital, Chuncheon, South Korea
| | - Joon Hyuk Park
- Department of Neuropsychiatry, Jeju National University Hospital, Jeju, South Korea
| | - Jung Jae Lee
- Department of Psychiatry, Dankook University Hospital, Cheonan, South Korea
| | - Kyung Phil Kwak
- Department of Psychiatry, Dongguk University Gyeongju Hospital, Gyeongju, South Korea
| | - Seok Bum Lee
- Department of Psychiatry, Dankook University Hospital, Cheonan, South Korea
| | - Seok Woo Moon
- Department of Psychiatry, School of Medicine, Konkuk University and Konkuk University Chungju Hospital, Chungju, South Korea
| | - Seung-Ho Ryu
- Department of Psychiatry, School of Medicine, Konkuk University and Konkuk University Medical Center, Seoul, South Korea
| | - Shin Gyeom Kim
- Department of Neuropsychiatry, Soonchunhyang University Bucheon Hospital, Bucheon, South Korea
| | - Ki Woong Kim
- Department of Neuropsychiatry, Seoul National University Bundang Hospital, Seongnam, South Korea
- Department of Psychiatry, Seoul National University, College of Medicine, Seoul, South Korea
- Department of Brain and Cognitive Science, Seoul National University College of Natural Sciences, Seoul, South Korea
- Institute of Human Behavioral Medicine, Seoul National University Medical Research Center, Seoul, South Korea
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Anderson AB, Rivera J, Grazal CF, Tintle SM, Potter BK, Dickens JF, Forsberg JA. Estimating the 5-Year Publication Potential for Grant Awardees: Analysis of the Peer Reviewed Orthopaedic Research Program. Mil Med 2025:usaf173. [PMID: 40333012 DOI: 10.1093/milmed/usaf173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2024] [Revised: 10/15/2024] [Accepted: 04/14/2025] [Indexed: 05/09/2025] Open
Abstract
INTRODUCTION Research-funding agencies are sometimes criticized for their ineffective review of grant proposals and for prioritizing competition for grants over project outcomes. Deficiencies in the review process for grants may limit the diversity of a program's applicant pool and restrict opportunities for publication. Our study asked what features of Peer Reviewed Orthopaedic Research Program (PRORP) grants and grant recipients were associated with successful grant outcomes, with success defined as publication of results within 5 years of receipt of funding. MATERIALS AND METHODS Using data from all PRORP grants from 2009 to 2017, we built machine-learned predictive models to estimate publication within 5 years. Features included in the analysis were principal investigator characteristics (sex, degree, and institution type) and grant characteristics (research grant mechanism, primary and secondary research topics, and amount awarded). We evaluated model performance using calibration plots and then determined the models' discriminatory ability by estimating the area under the receiver operator curve and c-statistic. Then we used Brier scores to obtain an overall assessment of each model's accuracy. We ultimately selected 1 model for administrative use based on its performance measures. RESULTS The Bayesian generalized linear model performed best (area under the curve, 0.82 [95% CI, 0.68-0.95]; Brier score, 0.17 [95% CI, 0.10-0.23]) and therefore was selected. It showed administrative utility in decision curve analysis. Awardee features most strongly associated with publication were previous award winner (no), principal investigator specialty (anesthesiology), sex (male), degree (PhD), and institution type (university). Grant features most strongly associated with publication were primary topic (stem cell therapy and chemoprevention), secondary topic (biologics), research type (in vitro study and animal validation), award mechanism (translational research), award amount > median amount ($598,000), and award years 2010-2011. CONCLUSIONS This model can aid the PRORP in identifying awardees who will successfully publish, and funding agencies and policymakers likewise can use it to apportion grants in a manner that promotes diversity across the applicant pool.
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Affiliation(s)
- Ashley B Anderson
- Division of Orthopaedics, Department of Surgery, Walter Reed National Military Medical Center, Uniformed Services University, Bethesda, MA 20889, United States
| | - Julio Rivera
- Henry Jackson Foundation for the Advancement of Military Medicine, Bethesda, MA 20817, United States
| | - Clare F Grazal
- Henry Jackson Foundation for the Advancement of Military Medicine, Bethesda, MA 20817, United States
| | - Scott M Tintle
- Division of Orthopaedics, Department of Surgery, Walter Reed National Military Medical Center, Uniformed Services University, Bethesda, MA 20889, United States
| | - Benjamin K Potter
- Division of Orthopaedics, Department of Surgery, Walter Reed National Military Medical Center, Uniformed Services University, Bethesda, MA 20889, United States
| | - Jonathan F Dickens
- Division of Orthopaedics, Department of Surgery, Walter Reed National Military Medical Center, Uniformed Services University, Bethesda, MA 20889, United States
| | - Jonathan A Forsberg
- Division of Orthopaedics, Department of Surgery, Walter Reed National Military Medical Center, Uniformed Services University, Bethesda, MA 20889, United States
- Department of Orthopaedic Surgery, The Johns Hopkins University Hospital, Baltimore, MA 21287, United States
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Paternina-Caicedo A, Ochoa-Diaz MM, Pinzón-Redondo H, Guzmán A, Alvis-Guzmán N, Alvis-Zakzuk N, Orozco-Garcia D, Fernandez-Vasquez R, He H, Smith AD, De la Hoz-Restrepo F. Development and Validation of a Prediction Score for Critical Admission in Children With Dengue. Pediatr Infect Dis J 2025:00006454-990000000-01303. [PMID: 40294334 DOI: 10.1097/inf.0000000000004835] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 04/30/2025]
Abstract
OBJECTIVES This study aimed to develop and validate a clinical score for the prediction of critical care entrance in children with dengue. METHODS We conducted a retrospective cohort study using admissions from January 2019 to August 2021, at Hospital Infantil Napoleón Franco Pareja, in Cartagena, Colombia. We included all children 18 years or younger, with a positive immunoglobulin M or nonstructural protein 1 laboratory test and admitted for follow-up at the emergency department. We selected variables retrospectively collected on emergency admission for feature selection. We assessed discrimination and calibration in the development dataset, using 1000 bootstrap replications for internal validation. Data from 2019 to 2020 were used for development and 2021 for temporal validation. We report the c -statistic for discrimination with 95% confidence intervals (CIs), as well as the calibration intercept and slope. RESULTS One thousand three hundred eighty-five patients were included for development and internal validation. In temporal validation with 519 additional patients, the c -statistic was 0.82 (95% CI: 0.77-0.87), with a calibration slope of 0.98 (95% CI: 0.77-1.18). We selected the 50 th percentile of the distribution of predicted probability of critical care entrance (5%) as a threshold value for increased alert at emergency admission, missing 10% of all cases that need to enter critical care (sensitivity of 90% with 95% CI of 82-95, and specificity of 48% with 95% CI of 41-50). CONCLUSIONS Our validated model can be useful to predict critical care entrance in children with dengue. We recommend the validation and potential recalibration of our score in other clinical settings.
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Affiliation(s)
- Angel Paternina-Caicedo
- From the Faculty of Health Sciences, GIBACUS Research Group, Universidad del Sinú, Cartagena, Colombia
| | - Margarita M Ochoa-Diaz
- From the Faculty of Health Sciences, GIBACUS Research Group, Universidad del Sinú, Cartagena, Colombia
| | - Hernando Pinzón-Redondo
- Hospital Infantil Napoleón Franco Pareja, Cartagena, Colombia
- Universidad de Cartagena, Cartagena, Colombia
| | - Angel Guzmán
- Hospital Infantil Napoleón Franco Pareja, Cartagena, Colombia
| | | | - Nelson Alvis-Zakzuk
- Universidade de São Paulo, Sao Paulo, Brazil
- Department of Health Sciences. Universidad de la Costa. Barranquilla, Colombia
| | - Daniela Orozco-Garcia
- From the Faculty of Health Sciences, GIBACUS Research Group, Universidad del Sinú, Cartagena, Colombia
| | - Ronald Fernandez-Vasquez
- From the Faculty of Health Sciences, GIBACUS Research Group, Universidad del Sinú, Cartagena, Colombia
| | - Hua He
- Department of Epidemiology, School of Public Health and Tropical Medicine, Tulane University, New Orleans, Louisiana
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Schwab S, Banz V, Held U, Hoessly L, Magini G. Does the UK DCD Risk Score have statistical flaws? J Hepatol 2025:S0168-8278(25)00289-2. [PMID: 40328364 DOI: 10.1016/j.jhep.2025.04.030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/03/2024] [Revised: 04/17/2025] [Accepted: 04/24/2025] [Indexed: 05/08/2025]
Affiliation(s)
- Simon Schwab
- Swisstransplant, Bern, Switzerland; Center for Reproducible Science, University of Zurich, Zurich, Switzerland.
| | - Vanessa Banz
- Department of Visceral Surgery and Medicine, Bern University Hospital, Inselspital, University of Bern, Bern, Switzerland
| | - Ulrike Held
- Department of Biostatistics, Epidemiology, Biostatistics and Prevention Institute (EBPI), University of Zurich, Zurich, Switzerland
| | - Linard Hoessly
- Swiss Transplant Cohort Study (STCS), University Hospital Basel, Basel, Switzerland
| | - Giulia Magini
- Division of Transplantation, Department of Surgery, Geneva University Hospitals, Geneva, Switzerland
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Hermsen M, Lyons PG, Persad G, Bewley AF, Mao C, Chhikara K, Mayampurath A, Churpek M, Peek ME, Luo Y, Parker WF. Age and Saving Lives in Crisis Standards of Care: A Multicenter Cohort Study of Triage Score Prognostic Accuracy. Crit Care Explor 2025; 7:e1256. [PMID: 40358051 PMCID: PMC12074069 DOI: 10.1097/cce.0000000000001256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2025] Open
Abstract
IMPORTANCE Current protocols to triage life support use scores that are biased and inaccurate. OBJECTIVES To determine if adding age to triage protocols used in disaster scenarios improves the identification of critically ill patients likely to survive. DESIGN, SETTING, AND PARTICIPANTS Observational cohort study from March 1, 2020, to March 1, 2022, at 22 hospitals in three networks, divided into derivation (12 hospitals) and validation cohorts (ten hospitals). Participants were critically ill adults (90% COVID-19 positive) who would have needed life support during an overwhelming case surge. Life support was defined as vasoactive medications for shock, invasive or noninvasive mechanical ventilation, or oxygen therapy with Pao2/Fio2 less than 200. MAIN OUTCOMES AND MEASURES The primary outcome was death in the intensive care unit. We fit logistic regression models using a modified Sequential Organ Failure Assessment (SOFA) score with and without age in the derivation cohort and assessed predictive performance in the validation cohort using area under the receiver operating characteristic curves (AUCs) and compared observed and predicted mortality. RESULTS The final analysis contained 7,660 patients with 16,711 life-support episodes. In the validation cohort, the AUC for age plus SOFA was significantly higher than the AUC for SOFA alone (0.66 vs. 0.54; p < 0.001). SOFA score substantially overpredicted mortality (13% predicted vs. 5% observed) for younger patients (< 40 yr) and underestimated mortality (14% predicted vs. 31% observed) for older patients (> 80 yr). In contrast, age plus SOFA had good calibration overall and across age groups. The addition of age improved but did not eliminate differences between observed and predicted mortality across racial-ethnic groups. CONCLUSIONS AND RELEVANCE Age-inclusive triage better identifies ICU survivors than SOFA alone and is more equitable. Incorporating age into prioritization algorithms could save more lives in a crisis scenario.
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Affiliation(s)
- Michael Hermsen
- Department of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI
| | - Patrick G. Lyons
- Department of Medicine, Washington University School of Medicine in St. Louis, St. Louis, MO
| | - Govind Persad
- University of Denver Sturm College of Law, Denver, CO
| | - Alice F. Bewley
- Department of Medicine, Washington University School of Medicine in St. Louis, St. Louis, MO
| | - Chengsheng Mao
- Northwestern University Feinberg School of Medicine, Chicago, IL
| | - Kaveri Chhikara
- Department of Medicine, University of Chicago Pritzker School of Medicine, Chicago, IL
| | - Anoop Mayampurath
- Department of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI
| | - Matthew Churpek
- Department of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI
| | - Monica E. Peek
- Department of Medicine, University of Chicago Pritzker School of Medicine, Chicago, IL
| | - Yuan Luo
- Northwestern University Feinberg School of Medicine, Chicago, IL
| | - William F. Parker
- Department of Medicine, University of Chicago Pritzker School of Medicine, Chicago, IL
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Hong T, Zhang H, Zhao Q, Liu L, Sun J, Hu S, Mao Y. A Hybrid Machine Learning CT-Based Radiomics Nomogram for Predicting Cancer-Specific Survival in Curatively Resected Colorectal Cancer. Acad Radiol 2025; 32:2630-2641. [PMID: 39922745 DOI: 10.1016/j.acra.2024.12.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2024] [Revised: 12/10/2024] [Accepted: 12/10/2024] [Indexed: 02/10/2025]
Abstract
RATIONALE AND OBJECTIVES To develop and validate a computed tomography-based radiomics nomogram for cancer-specific survival (CSS) prediction in curatively resected colorectal cancer (CRC), and its performance was compared with the American Joint Committee on Cancer (AJCC) staging and clinical-pathological models. MATERIALS AND METHODS A total of 794 patients with curatively resected CRC from a prospective cancer registry program were included and randomly divided into the training (n = 556) and validation (n = 238) cohorts. A radiomics signature (RS) predicting CSS was constructed with a hybrid automatic machine learning strategy, and the prognostic value was assessed with Kaplan-Meier (KM) survival analysis. The performance of the established models was assessed by the discrimination, calibration, and clinical utility. RESULTS A 10-feature-based RS with independent prognostic value was developed. KM survival curves showed that high-risk patients defined by RS had a worse CSS than the low-risk patients (log-rank P<0.001). The radiomics nomogram integrating the RS and clinical-pathological factors had the optimal performance in predicting CSS in terms of Harrell's concordance index (0.803 [95% confidence interval: 0.761-0.845] for the primary cohort, 0.772 [95% confidence interval: 0.702-0.841] for the validation cohort), time-dependent receiver operating curves (time-ROC) (the area under the time-ROC curves [AUC] at three years were 84.06±2.86 and at five years were 86.35±2.19 in the primary cohort, the AUC at three years were 77.6±4.76, and at five years were 84±3.66 in the validation cohort), calibration curves and decision curve analysis, in comparison with the AJCC staging model, clinical-pathological model, and the RS alone. CONCLUSION The radiomics nomogram integrating the RS and clinical-pathological factors could be a valuable individualized predictor of the CSS for curatively resected CRC patients.
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Affiliation(s)
- Tingting Hong
- Department of Medical Oncology, the Affiliated Hospital of Jiangnan University, No.1000, Hefeng Road, Wuxi 214000, China (T.H., Y.M.).
| | - Heng Zhang
- Department of Radiology, the Affiliated Hospital of Jiangnan University, No.1000, Hefeng Road, Wuxi 214000, China (H.Z., S.H.).
| | - Qiming Zhao
- Department of Artificial Intelligence and Computer Science, Jiangnan University, No.1800, Lihu Big Road, Wuxi 214122, China (Q.Z., J.S.).
| | - Li Liu
- Big Data Center, the Affiliated Hospital of Jiangnan University, No.1000, Hefeng Road, Wuxi 214000, China (L.L.).
| | - Jun Sun
- Department of Artificial Intelligence and Computer Science, Jiangnan University, No.1800, Lihu Big Road, Wuxi 214122, China (Q.Z., J.S.).
| | - Shudong Hu
- Department of Radiology, the Affiliated Hospital of Jiangnan University, No.1000, Hefeng Road, Wuxi 214000, China (H.Z., S.H.).
| | - Yong Mao
- Department of Medical Oncology, the Affiliated Hospital of Jiangnan University, No.1000, Hefeng Road, Wuxi 214000, China (T.H., Y.M.).
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Kremers HM, Wyles CC, Slusser JP, O’Byrne TJ, Sagheb E, Lewallen DG, Berry DJ, Osmon DR, Sohn S, Kremers WK. Data-Driven Approach to Development of a Risk Score for Periprosthetic Joint Infections in Total Joint Arthroplasty Using Electronic Health Records. J Arthroplasty 2025; 40:1308-1316.e13. [PMID: 39489386 PMCID: PMC11985314 DOI: 10.1016/j.arth.2024.10.129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Revised: 10/22/2024] [Accepted: 10/24/2024] [Indexed: 11/05/2024] Open
Abstract
BACKGROUND Periprosthetic joint infection (PJI) is an uncommon, but serious complication in total joint arthroplasty. Personalized risk prediction and risk factor management may allow better preoperative assessment and improved outcomes. We evaluated different data-driven approaches to develop surgery-specific PJI prediction models using large-scale data from the electronic health records (EHRs). METHODS A large institutional arthroplasty registry was leveraged to collect data from 58,574 procedures of 41,844 patients who underwent at least one primary and/or revision hip and/or knee arthroplasty between 2000 and 2019. The registry dataset was augmented with additional clinical, procedural, and laboratory data from the EHRs for more than 100 potential predictor variables. The main outcome was PJI within the first year after surgery. We implemented both traditional and machine learning methods for model development (lasso regression, relaxed lasso regression, ridge regression, random forest, stepwise regression, extreme gradient boosting, neural network) and used 10-fold cross-validation to calculate measures of model performance in terms of discrimination (c-statistic) and calibration. RESULTS All models discriminated similarly in predicting PJI risk, with negligible differences of less than 0.08 between the best- and worst-performing models. The relaxed and fully relaxed lasso models using the Cox model structure outperformed the other models with concordances of 0.787 in primary hip arthroplasty and 0.722 in revision hip arthroplasty, with the number of predictors ranging from nine to 41. The concordances with the relaxed lasso models were 0.681 in primary and 0.699 in revision knee arthroplasty, with a higher number of predictors in the models. Predictors included in the models varied substantially across the four surgical groups. CONCLUSIONS The incorporation of additional data from the EHRs offers limited improvement in PJI risk stratification. Furthermore, improvement in PJI risk prediction was modest with the machine learning approaches and may not justify the added complexity.
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Affiliation(s)
- Hilal Maradit Kremers
- Department of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota
- Department of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota
| | - Cody C. Wyles
- Department of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota
| | - Joshua P. Slusser
- Department of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota
| | - Thomas J. O’Byrne
- Department of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota
| | - Elham Sagheb
- Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, Minnesota
| | | | - Daniel J. Berry
- Department of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota
| | - Douglas R. Osmon
- Department of Internal Medicine, Mayo Clinic, Rochester, Minnesota
| | - Sunghwan Sohn
- Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, Minnesota
| | - Walter K. Kremers
- Department of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota
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11
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Khan MQ, Watt KD, Teasdale C. Development of posttransplant diabetes mellitus in US recipients of liver transplant is influenced by OPTN region. Liver Transpl 2025; 31:637-647. [PMID: 39724669 DOI: 10.1097/lvt.0000000000000508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/02/2024] [Accepted: 09/24/2024] [Indexed: 12/28/2024]
Abstract
Posttransplant diabetes mellitus (PTDM) is associated with significant morbidity and mortality in liver transplant recipients (LTRs). We used the Organ Procurement and Transplantation Network (OPTN) database to compare the incidence of developing PTDM across the United States and develop a risk prediction model for new-onset PTDM using OPTN region as well as donor-related, recipient-related, and transplant-related factors. All US adult, primary, deceased donor, LTRs between January 1, 2007, and December 31, 2016, with no prior history of diabetes noted , were identified. Kaplan-Meier estimators were used to calculate the cumulative incidence of PTDM, stratified by OPTN region. Multivariable Cox proportional hazards models were fitted to estimate hazards of PTDM in each OPTN region and build a risk prediction model, through backward selection. Cumulative incidence of PTDM at 1 year, 3 years, and 5 years after transplant was 12.0%, 16.1%, and 18.9%, respectively. Region 3, followed by regions 8, 2, and 9, had the highest adjusted hazards of developing PTDM. Inclusion of OPTN region in a risk prediction model for PTDM in LTRs (including recipient age, sex, race, education, insurance coverage, body mass index, primary liver disease, cold ischemia time, and donor history of diabetes) modestly improved performance (C-statistic = 0.60). In patients without pre-existing, confirmed diabetes mellitus, the incidence of PTDM in LTRs varied across OPTN regions, with the highest hazards in region 3, followed by regions 8, 2, and 9. The performance of a novel risk prediction model for PTDM in LTRs has improved performance with the inclusion of the OPTN region. Vigilance is recommended to centers in high-risk regions to identify PTDM and mitigate its development.
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Affiliation(s)
- Mohammad Qasim Khan
- Division of Gastroenterology, Department of Medicine, University of Western Ontario, London, Ontario, Canada
- Department of Epidemiology and Biostatistics, University of Western Ontario, London, Ontario, Canada
| | - Kymberly D Watt
- Division of Gastroenterology & Hepatology, Department of Medicine, Mayo Clinic, Rochester, Minnesota, USA
| | - Chloe Teasdale
- Department of Epidemiology and Biostatistics, CUNY Graduate School of Public Health and Health Policy, New York, New York, USA
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12
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Damen PJJ, Peters M, Hobbs B, Chen Y, Titt U, Nout R, Mohan R, Lin SH, van Rossum PSN. Defining the Optimal Radiation-induced Lymphopenia Metric to Discern Its Survival Impact in Esophageal Cancer. Int J Radiat Oncol Biol Phys 2025; 122:31-42. [PMID: 39755214 DOI: 10.1016/j.ijrobp.2024.12.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Revised: 12/03/2024] [Accepted: 12/22/2024] [Indexed: 01/06/2025]
Abstract
PURPOSE A detrimental association between radiation-induced lymphopenia (RIL) and oncologic outcomes in patients with esophageal cancer has been established. However, an optimal metric for RIL remains undefined but is important for the application of this knowledge in clinical decision-making and trial designs. The aim of this study was to find the optimal RIL metric discerning survival. METHODS AND MATERIALS Patients with esophageal cancer treated with concurrent chemoradiation therapy (CRT; 2004-2022) were selected. Studied metrics included absolute lymphocyte counts (ALCs) and neutrophil counts-and calculated derivatives-at baseline and during CRT. Multivariable Cox regression models for progression-free survival (PFS) and overall survival (OS) were developed for each RIL metric. The optimal RIL metric was defined as the one in the model with the highest c-statistic. RESULTS Among 1339 included patients, 68% received photon-based and 32% proton-based CRT (median follow-up, 24.9 months). In multivariable analysis, the best-performing models included "ALC in week 3 of CRT" (corrected c-statistic 0.683 for PFS and 0.662 for OS). At an optimal threshold of <0.5 × 103/μL (ie, grade ≥3 RIL), ALC in week 3 was significantly associated with PFS (adjusted hazard ratio, 1.64; 95% CI, 1.27-2.13) and OS (adjusted hazard ratio, 1.56; 95% CI, 1.15-2.08), with 5-year PFS of 29% vs 40% and OS of 38% vs 51%, respectively. CONCLUSIONS Reaching grade ≥3 RIL in week 3 of CRT for esophageal cancer is the strongest RIL metric to distinguish survival outcomes. We suggest that this metric should be the target for lymphopenia-mitigating strategies and propose this metric to be included in future trials.
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Affiliation(s)
- Pim J J Damen
- Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas; Department of Radiation Oncology, Amsterdam University Medical Center, Amsterdam, The Netherlands; Department of Radiotherapy, Erasmus Medical Center Cancer Institute, University Medical Center Rotterdam, Rotterdam, The Netherlands.
| | - Max Peters
- Department of Radiotherapy, Radiotherapiegroep, Deventer, The Netherlands
| | - Brian Hobbs
- Department of Population Health, Dell Medical School, The University of Texas at Austin, Austin, Texas
| | - Yiqing Chen
- Department of Biostatistics and Data Science, University of Texas Health Science Center, Houston, Texas
| | - Uwe Titt
- Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas
| | - Remi Nout
- Department of Radiotherapy, Erasmus Medical Center Cancer Institute, University Medical Center Rotterdam, Rotterdam, The Netherlands
| | - Radhe Mohan
- Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas
| | - Steven H Lin
- Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas
| | - Peter S N van Rossum
- Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas; Department of Radiation Oncology, Amsterdam University Medical Center, Amsterdam, The Netherlands
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13
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Lin H, Hua J, Gong Z, Chen M, Qiu B, Wu Y, He W, Wang Y, Feng Z, Liang Y, Long W, Li R, Kuang Q, Chen Y, Lu J, Luo S, Zhao W, Yan L, Chen X, Shi Z, Xu Z, Mo Z, Liu E, Han C, Cui Y, Yang X, Chen X, Liu J, Pan X, Madabhushi A, Lu C, Liu Z. Multimodal radiopathological integration for prognosis and prediction of adjuvant chemotherapy benefit in resectable lung adenocarcinoma: A multicentre study. Cancer Lett 2025; 616:217557. [PMID: 39954935 DOI: 10.1016/j.canlet.2025.217557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2024] [Revised: 02/06/2025] [Accepted: 02/12/2025] [Indexed: 02/17/2025]
Abstract
Lung adenocarcinoma (LUAD) has a heterogeneous prognosis and controversial postoperative treatment protocols. We aim to develop and validate a multimodal analysis framework that integrates CT images with H&E-stained whole-slide images (WSIs) to enhance risk stratification and predict adjuvant chemotherapy benefit in LUAD patients. We retrospectively collected data from 1039 resectable LUAD patients (stage I-III) across four centres, forming a training dataset (n = 303), two testing datasets (n = 197 and n = 228) for survival analysis, and a feature testing dataset (n = 311) for interpretability analysis. We extracted 487 tumour/peritumour radiomics features from CT images and 783 multiscale pathomics features from WSIs, characterising the shape of tumour (CT) and cancer nuclei (WSIs), as well as the intensity and texture of tumour/peritumour regions (CT) and tumour regions/epithelium/stroma (WSIs). A survival support vector machine (SVM) was employed to establish a radiopathomics signature using the optimal set of multimodal features, including 2 tumour radiomics features, 3 peritumour radiomics features, and 4 nuclei heterogeneity pathomics features. The radiopathomics signature outperformed both radiomics and pathomics signatures in predicting disease-free survival (DFS) (C-index: training dataset, 0.744 vs. 0.734 and 0.692; testing dataset 1, 0.719 vs. 0.701 and 0.638; testing dataset 2, 0.711 vs. 0.689 and 0.684), demonstrating greater robustness compared to the state-of-the-art deep learning integration approaches. It provided additional prognostic information beyond clinical risk factors (C-index of clinical plus radiopathomics vs. clinical models: training dataset, 0.763 vs. 0.676; testing dataset 1, 0.739 vs. 0.676; testing dataset 2, 0.711 vs. 0.699, p < 0.001). Compared to low-risk patients categorised by the radiopathomics signature, high-risk patients achieved comparable DFS when receiving adjuvant chemotherapy (training dataset, HR = 1.53, 95 % CI 0.85-2.73, p = 0.153; testing dataset 1 and 2, HR = 1.62, 95 % CI 0.92-2.85, p = 0.096), but had significantly worse DFS when only observed after surgery (training dataset, HR = 4.46, 95 % CI 2.82-7.05, p < 0.001; testing datasets 1 and 2, HR = 3.52, 95 % CI 2.26-5.49, p < 0.001), indicating the predictive value of the radiopathomics signature for adjuvant chemotherapy benefit (interaction p < 0.05). Further interpretability analysis revealed that the radiopathomics signature was associated with various prognostic/treatment-related biomarkers, including differentiation, immune phenotypes, and EGFR status. The multimodal integration framework offered a cost-effective approach for LUAD characterisation by leveraging complementary information from radiological and histopathological imaging. The radiopathomics signature demonstrated robust prognostic capabilities, providing valuable insights for postoperative treatment decisions.
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Affiliation(s)
- Huan Lin
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China
| | - Junjie Hua
- Department of Epidemiology, School of Public Health, Sun Yat-sen University, Guangzhou, 510080, China
| | - Zhengze Gong
- Information and Data Centre, Guangzhou First People's Hospital, School of Medicine, South China University of Technology, Guangzhou, 510180, China
| | - Mingwei Chen
- School of Computer Science and Information Security, Guilin University of Electronic Technology, Guilin, 541004, China
| | - Bingjiang Qiu
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China; Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China; Guangdong Cardiovascular Institute, Guangdong Provincial People's Hospital, Guangdong Academy of Sciences, Guangzhou, 510080, China
| | - Yuxin Wu
- Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China
| | - Wenfeng He
- Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China
| | - Yumeng Wang
- School of Computer Science and Information Security, Guilin University of Electronic Technology, Guilin, 541004, China
| | - Zhengyun Feng
- School of Computer Science and Information Security, Guilin University of Electronic Technology, Guilin, 541004, China
| | - Yanting Liang
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China
| | - Wansheng Long
- Department of Radiology, Jiangmen Central Hospital, Jiangmen, 529030, China
| | - Ronggang Li
- Department of Pathology, Jiangmen Central Hospital, Jiangmen, 529030, China
| | - Qionglian Kuang
- Department of Radiology, Jiangmen Central Hospital, Jiangmen, 529030, China
| | - Yingxin Chen
- Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China
| | - Jiawei Lu
- Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China
| | - Shiwei Luo
- Department of Radiology, The Second Xiangya Hospital, Central South University, Changsha, 410011, China
| | - Wei Zhao
- Department of Radiology, The Second Xiangya Hospital, Central South University, Changsha, 410011, China
| | - Lixu Yan
- Department of Pathology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China
| | - Xin Chen
- Department of Radiology, Guangzhou First People's Hospital, School of Medicine, South China University of Technology, Guangzhou, 510180, China
| | - Zhenwei Shi
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China; Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China; Medical Research Institute, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China
| | - Zeyan Xu
- Department of Radiology, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Yunnan Cancer Center, Kunming, 650118, China
| | - Ziyang Mo
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China
| | - Entao Liu
- WeiLun PET Center, Department of Nuclear Medicine, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China
| | - Chu Han
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China; Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China; Medical Research Institute, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China
| | - Yanfen Cui
- Department of Radiology, Shanxi Province Cancer Hospital, Shanxi Hospital Affiliated to Cancer Hospital, Chinese Academy of Medical Sciences/Cancer Hospital Affiliated to Shanxi Medical University, Taiyuan, 030013, China
| | - Xiaotang Yang
- Department of Radiology, Shanxi Province Cancer Hospital, Shanxi Hospital Affiliated to Cancer Hospital, Chinese Academy of Medical Sciences/Cancer Hospital Affiliated to Shanxi Medical University, Taiyuan, 030013, China.
| | - Xiangmeng Chen
- Department of Radiology, Jiangmen Central Hospital, Jiangmen, 529030, China.
| | - Jun Liu
- Department of Radiology, The Second Xiangya Hospital, Central South University, Changsha, 410011, China.
| | - Xipeng Pan
- School of Computer Science and Information Security, Guilin University of Electronic Technology, Guilin, 541004, China.
| | - Anant Madabhushi
- Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
| | - Cheng Lu
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China; Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China; Medical Research Institute, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China.
| | - Zaiyi Liu
- Department of Radiology, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China; Guangdong Provincial Key Laboratory of Artificial Intelligence in Medical Image Analysis and Application, Guangzhou, 510080, China.
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14
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Viñuela-Benéitez MC, Iglesias Pérez C, Ortega Morán L, García Escobar I, Cacho Lavín D, Porta I Balanyà R, García Adrián S, Carmona Campos M, Benítez López G, Santiago Crespo JA, Lobo de Mena M, Pérez Altozano J, Gallardo Díaz E, Tejerina Peces J, Ochoa Rivas P, Ortiz Morales MJ, Castellón Rubio VE, Díez Pedroche C, Rosales Sueiro M, Gonçalves F, Sánchez-Cánovas M, Ruiz MÁ, Muñoz-Langa J, Pérez Segura P, de Castro EM, Carmona-Bayonas A, Jiménez-Fonseca P, Muñoz Martín AJ. External validation of a prediction model for bleeding events in anticoagulated cancer patients with venous thromboembolism (PredictAI). Clin Transl Oncol 2025:10.1007/s12094-025-03890-5. [PMID: 40287561 DOI: 10.1007/s12094-025-03890-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2025] [Accepted: 02/25/2025] [Indexed: 04/29/2025]
Abstract
OBJECTIVE The objective of this study was to validate the PredictAI models for predicting major bleeding (MB) in patients with active cancer and venous thromboembolism (VTE) with anticoagulant (ACO) therapy, within 6 months after primary VTE, using an independent cohort of patients from the TESEO database. METHODS This study conducted an external validation of the PredictAI models using the international, prospective TESEO registry from July 2018 until October 2021. Data from 40 Spanish and Portuguese hospitals recruiting consecutive cases of cancer-associated thrombosis under anticoagulant treatment and without missing values regarding the model outcome or predictors were used. Patients with baseline MB or unknown MB status during follow-up were excluded for the validation analysis. Logistic regression (LR), decision tree (DT), and random forest (RF) approaches were used to validate the models. RESULTS Included patients from the TESEO cohort (2179 patients) had similar key demographics and clinical characteristics to the PredictAI cohort (21,227 patients). During the 6-month follow-up period, 10.9% (n = 2314) and 5.9% (n = 129) of patients experienced at least one MB event in the PredictAI and TESEO cohorts, respectively. Hemoglobin, metastasis, age, platelets, leukocytes, and serum creatinine were described as predictors for MB in PredictAI; the external validation results in TESEO showed statistical significance by LR and RF approaches, with ROC-AUC values of 0.59 and 0.56, respectively (both p < 0.05). CONCLUSION PredictAI models for predicting MB in anticoagulant-treated cancer patients within the first 6 months following VTE diagnosis have been externally validated. These models may be considered as a tool to guide objective decisions regarding the indication or extension of anticoagulant therapy in this population.
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Affiliation(s)
| | - Claudia Iglesias Pérez
- Medical Oncology Department, Hospital Universitario Central de Asturias, ISPA, Oviedo, Spain
| | - Laura Ortega Morán
- Department of Medical Oncology, Instituto de Investigación Sanitaria Gregorio Marañón, Universidad Complutense, Madrid, Spain
| | | | - Diego Cacho Lavín
- Department of Medical Oncology, Hospital Universitario Marqués de Valdecilla (Idival), Santander, Cantabria, Spain
| | - Rut Porta I Balanyà
- Department of Medical Oncology, Institut Català d'Oncologia (ICO), Hospital Universitari de Girona Doctor Josep Trueta, Girona, Spain
| | - Silvia García Adrián
- Department of Medical Oncology, Hospital Universitario de Móstoles, Madrid, Spain
| | - Marta Carmona Campos
- Department of Medical Oncology, Hospital Clínico Universitario de Santiago de Compostela, A Coruña, Spain
| | - Gretel Benítez López
- Department of Medical Oncology, C.H.U. Insular-Materno Infantil de Gran Canaria, Las Palmas, Spain
| | | | - Miriam Lobo de Mena
- Department of Medical Oncology, Consorcio Hospital General Universitario de Valencia, Valencia, Spain
| | | | - Enrique Gallardo Díaz
- Department of Oncology, Institut d'Investigació i Innovació Parc Taulí (I3PT-CERCA), Parc Taulí Hospital Universitari, Universitat Autònoma de Barcelona, Sabadell, Spain
| | - Julia Tejerina Peces
- Department of Medical Oncology, Hospital Clínico San Carlos (Madrid), Instituto de Investigación Clínico San Carlos (IdISSC), Madrid, Spain
| | - Pilar Ochoa Rivas
- Department of Medical Oncology, Hospital Central de la Defensa Gómez Ulla, Madrid, Spain
| | | | | | - Carmen Díez Pedroche
- Department of Internal Medicine, Hospital 12 de Octubre, Universidad Complutense, Madrid, Spain
| | - María Rosales Sueiro
- Department of Immunohemotherapy, Portuguese Institute of Oncology of Porto (IPO Porto), Porto, Portugal
| | - Felipe Gonçalves
- Department of Immunohemotherapy, Portuguese Institute of Oncology of Lisbon Francisco Gentil (IPO Lisboa), Lisboa, Portugal
| | - Manuel Sánchez-Cánovas
- Department of Medical Oncology, Hospital Universitario José Maria Morales Meseguer, Murcia, Spain
| | | | - José Muñoz-Langa
- Department of Medical Oncology, Hospital Arnau de Villanova de Valencia, Valencia, Spain
| | - Pedro Pérez Segura
- Department of Medical Oncology, Hospital Clínico San Carlos (Madrid), Instituto de Investigación Clínico San Carlos (IdISSC), Madrid, Spain
| | - Eva Martínez de Castro
- Department of Medical Oncology, Hospital Universitario Marqués de Valdecilla (Idival), Santander, Cantabria, Spain
| | - Alberto Carmona-Bayonas
- Department of Medical Oncology, Hospital Universitario José Maria Morales Meseguer, Murcia, Spain
| | - Paula Jiménez-Fonseca
- Medical Oncology Department, Hospital Universitario Central de Asturias, ISPA, Oviedo, Spain
| | - Andrés Jesús Muñoz Martín
- Department of Medical Oncology, Instituto de Investigación Sanitaria Gregorio Marañón, Universidad Complutense, Madrid, Spain.
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15
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Wu Y, Li P, Wang M, Liu Y, Leng J, Li X, Lv X, Pang L, Zang N. A Systematic Review of Mortality Risk Prediction Models for Idiopathic Pulmonary Fibrosis. Br J Hosp Med (Lond) 2025; 86:1-22. [PMID: 40265534 DOI: 10.12968/hmed.2024.0934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/24/2025]
Abstract
Aims/Background Idiopathic pulmonary fibrosis (IPF) is associated with an increased mortality risk. However, the factors that contribute to this risk remain unknown. This study aimed to systematically review existing predictive models for IPF-related mortality and to evaluate prognostic factors associated with patient outcomes. Methods A comprehensive literature search was conducted on PubMed, Cochrane Library, Web of Science, and Embase for studies on IPF mortality risk prediction models published between 1 January 1984 and 15 November 2024. Two independent reviewers screened, extracted, and cross-checked the data. The risk of bias and model applicability were also evaluated. Results A total of 17 risk prediction models were identified. The area under the receiver operating characteristic (ROC) curve (AUC) ranged from 0.728 to 0.907, while the model validation results ranged from 0.750 to 0.920. The concordance index (C-index) of 10 studies was more than 0.7, indicating good predictive performance. This study encompassed a total of 17 risk prediction models incorporating between 3 and 8 combined prognostic variables, with the most frequently included predictors being forced vital capacity as a percentage of the predicted value (FVC%pred), carbon monoxide diffusion capacity as a percentage of the predicted value (DLCO%pred), gender, age, six-minute walk test (6MWT) results, and dyspnea severity. Conclusion Current IPF mortality risk prediction models remain in an exploratory phase, with a generally high risk of bias. Furthermore, the lack of external validation in some models limits their generalizability. Future research should focus on improving the applicability of the model to enhance clinical application.
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Affiliation(s)
- Yingxu Wu
- First Clinical College, Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
| | - Pin Li
- Department of Endocrinology, Affiliated Hospital of Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
| | - Mei Wang
- College of Integrated Chinese and Western Medicine, Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
| | - Yongming Liu
- Department of Traditional Chinese Medicine Experimental Center, Affiliated Hospital of Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
| | - Jiapeng Leng
- College of Pharmacy, Liaoning University of Traditional Chinese Medicine, Dalian, Liaoning, China
| | - Xuetao Li
- College of Pharmacy, Liaoning University of Traditional Chinese Medicine, Dalian, Liaoning, China
| | - Xiaodong Lv
- Department of Respiratory, Affiliated Hospital of Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
| | - Lijian Pang
- Department of Respiratory, Affiliated Hospital of Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
| | - Ningzi Zang
- Department of Respiratory, Affiliated Hospital of Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
- College of Traditional Chinese Medicine, Liaoning University of Traditional Chinese Medicine, Shenyang, Liaoning, China
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16
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Yousif MF, Dolak KD, Adhikari S, White PC. Risk Factors for Adverse Outcomes in Children With Diabetic Ketoacidosis. J Clin Endocrinol Metab 2025; 110:e1609-e1618. [PMID: 39031569 DOI: 10.1210/clinem/dgae500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/03/2024] [Revised: 07/14/2024] [Accepted: 07/18/2024] [Indexed: 07/22/2024]
Abstract
OBJECTIVE Develop a multivariable model to identify children with diabetic ketoacidosis (DKA) and/or hyperglycemic hyperosmolar state (HHS) at increased risk of adverse outcomes and apply it to analyze adverse outcomes during and after the COVID-19 pandemic. METHODS Retrospective review of clinical data from 4565 admissions (4284 with DKA alone, 31 [0.7%] only HHS, 250 [5.4%] hyperosmolar DKA) to a large academic children's hospital from January 2010 to June 2023. Data from 2010-2019 (N = 3004) were used as a training dataset, and 2020-2021 (N = 903) and 2022-2023 (N = 658) data for validation. Death or intensive care unit stays > 48 hours comprised a composite "Adverse Outcome" group. Risks for this composite outcome were assessed using generalized estimating equations. RESULTS There were 47 admissions with Adverse Outcomes (1.5%) in 2010-2019, 46 (5.0%) in 2020-2021, and 16 (2.4%) in 2022-2023. Eight patients died (0.18%). Maximum serum glucose, initial pH, and diagnosis of type 2 diabetes most strongly predicted Adverse Outcomes. The proportion of patients with type 2 diabetes was highest in 2020-2021. A multivariable model incorporating these factors had excellent discrimination (area under receiver operator characteristic curve [AUC] of 0.948) for the composite outcome in the training dataset, and similar predictive power (AUC 0.960 and 0.873) in the 2020-2021 and 2022-2023 validation datasets, respectively. In the full dataset, AUC for death was 0.984. CONCLUSION Type 2 diabetes and severity of initial hyperglycemia and acidosis are independent risk factors for Adverse Outcomes and explain the higher frequency of Adverse Outcomes during the COVID-19 pandemic. Risks decreased in January 2022 to June 2023.
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Affiliation(s)
- Maha F Yousif
- Division of Pediatric Endocrinology, Department of Pediatrics, UT Southwestern Medical Center, Dallas, TX 75390, USA
| | - Katie D Dolak
- Division of Pediatric Endocrinology, Department of Pediatrics, UT Southwestern Medical Center, Dallas, TX 75390, USA
| | - Soumya Adhikari
- Division of Pediatric Endocrinology, Department of Pediatrics, UT Southwestern Medical Center, Dallas, TX 75390, USA
| | - Perrin C White
- Division of Pediatric Endocrinology, Department of Pediatrics, UT Southwestern Medical Center, Dallas, TX 75390, USA
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17
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Tieliwaerdi X, Manalo K, Abuduweili A, Khan S, Appiah-Kubi E, Williams BA, Oehler AC. Machine Learning-Based Prediction Models for Healthcare Outcomes in Patients Participating in Cardiac Rehabilitation: A Systematic Review. J Cardiopulm Rehabil Prev 2025:01273116-990000000-00203. [PMID: 40257822 DOI: 10.1097/hcr.0000000000000943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 04/22/2025]
Abstract
PURPOSE Cardiac rehabilitation (CR) has been proven to reduce mortality and morbidity in patients with cardiovascular disease. Machine learning (ML) techniques are increasingly used to predict healthcare outcomes in various fields of medicine including CR. This systemic review aims to perform critical appraisal of existing ML-based prognosis predictive model within CR and identify key research gaps in this area. REVIEW METHODS A systematic literature search was conducted in Scopus, PubMed, Web of Science, and Google Scholar from the inception of each database to January 28, 2024. The data extracted included clinical features, predicted outcomes, model development, and validation as well as model performance metrics. Included studies underwent quality assessments using the IJMEDI and Prediction Model Risk of Bias Assessment Tool checklist. SUMMARY A total of 22 ML-based clinical models from 7 studies across multiple phases of CR were included. Most models were developed using smaller patient cohorts from 41 to 227, with one exception involving 2280 patients. The prediction objectives ranged from patient intention to initiate CR to graduate from outpatient CR along with interval physiological and psychological progression in CR. The best-performing ML models reported area under the receiver operating characteristics curve between 0.82 and 0.91, with sensitivity from 0.77 to 0.95, indicating good prediction capabilities. However, none of them underwent calibration or external validation. Most studies raised concerns about bias. Readiness of these models for implementation into practice is questionable. External validation of existing models and development of new models with robust methodology based on larger populations and targeting diverse clinical outcomes in CR are needed.
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Affiliation(s)
- Xiarepati Tieliwaerdi
- Author Affiliations: Department of Medicine, Allegheny Health Network, Pittsburgh, Pennsylvania (Drs Tieliwaerdi, Manalo, Khan, and Appiah-kubi); Robotics Institute, Carnegie Mellon University, Pittsburgh, Pennsylvania(Dr Abuduweili); and Allegheny Health Network, Allegheny Health Network Cardiovascular Institute, Pittsburgh, Pennsylvania (Drs Williams and Oehler)
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Décarie-Labbé L, Mellah S, Dialahy IZ, Belleville S. Predicting cognitive change using functional, structural, and neuropsychological predictors. Brain Commun 2025; 7:fcaf155. [PMID: 40337465 PMCID: PMC12056721 DOI: 10.1093/braincomms/fcaf155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Revised: 03/31/2025] [Accepted: 04/17/2025] [Indexed: 05/09/2025] Open
Abstract
To effectively address Alzheimer's disease, it is crucial to understand its earliest manifestations, underlying mechanisms and early markers of progression. Recent findings of very early brain activation anomalies highlight their potential for early disease characterization and predicting future cognitive decline. Our objective was to evaluate the value of brain activation-both individually and in combination with structural and neuropsychological measures-for predicting cognitive change. The study included 105 individuals from the Consortium for the Early Identification of Alzheimer's Disease-Quebec cohort who exhibited subjective cognitive decline or mild cognitive impairment. Cognitive decline was assessed by calculating the slope of Montreal Cognitive Assessment scores using regression models across successive assessments, and individuals were characterized as either decliners or stable based on clinically reliable change. We evaluated cognitive decline predictions using unimodal models for each class of predictors and multimodal models that combined these predictors. Functional activation emerged as a strong predictor of cognitive change (R²=52.5%), with 87.6% accuracy and 98.7% specificity, performing comparably to structural and neuropsychological measures. Although the unimodal functional model exhibited high specificity, indicating that functional abnormalities frequently predict future decline, it had low sensitivity (60%), meaning that the absence of abnormalities does not rule out future decline. Multimodal models provided greater explanatory power than unimodal models and greater sensitivity than the functional model. These findings highlight the potential role of early brain activation anomalies in the early detection of future cognitive changes, offering valuable insights for clinicians and researchers in assessing cognitive decline risk and refining clinical trial criteria.
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Affiliation(s)
- Laurie Décarie-Labbé
- Research Center, Institut universitaire de gériatrie de Montréal, Montreal, Quebec, Canada, H3W 1W5
- Department of Psychology, Université de Montréal, Montreal, Quebec, Canada, H3C 3J7
| | - Samira Mellah
- Research Center, Institut universitaire de gériatrie de Montréal, Montreal, Quebec, Canada, H3W 1W5
| | - Isaora Z Dialahy
- Research Center, Institut universitaire de gériatrie de Montréal, Montreal, Quebec, Canada, H3W 1W5
| | - Sylvie Belleville
- Research Center, Institut universitaire de gériatrie de Montréal, Montreal, Quebec, Canada, H3W 1W5
- Department of Psychology, Université de Montréal, Montreal, Quebec, Canada, H3C 3J7
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Chen SF, Lee SE, Sadaei HJ, Park JB, Khattab A, Chen JF, Henegar C, Wineinger NE, Muse ED, Torkamani A. Meta-prediction of coronary artery disease risk. Nat Med 2025:10.1038/s41591-025-03648-0. [PMID: 40240837 DOI: 10.1038/s41591-025-03648-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 03/07/2025] [Indexed: 04/18/2025]
Abstract
Coronary artery disease (CAD) is a leading cause of morbidity and mortality worldwide, and accurately predicting individual risk is critical for prevention. Here we aimed to integrate unmodifiable risk factors, such as age and genetics, with modifiable risk factors, such as clinical and biometric measurements, into a meta-prediction framework that produces actionable and personalized risk estimates. In the initial development of the model, ~2,000 predictive features were considered, including demographic data, lifestyle factors, physical measurements, laboratory tests, medication usage, diagnoses and genetics. To power our meta-prediction approach, we stratified the UK Biobank into two primary cohorts: first, a prevalent CAD cohort used to train predictive models for cross-sectional prediction at baseline and prospective estimation of contributing risk factor levels and diagnoses (baseline models) and, second, an incident CAD cohort using, in part, these baseline models as meta-features to train a final CAD incident risk prediction model. The resultant 10-year incident CAD risk model, composed of 15 derived meta-features with multiple embedded polygenic risk scores, achieves an area under the curve of 0.84. In an independent test cohort from the All of Us research program, this model achieved an area under the curve of 0.81 for predicting 10-year incident CAD risk, outperforming standard clinical scores and previously developed integrative models. Moreover, this framework enables the generation of individualized risk reduction profiles by quantifying the potential impact of standard clinical interventions. Notably, genetic risk influences the extent to which these interventions reduce overall CAD risk, allowing for tailored prevention strategies.
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Affiliation(s)
- Shang-Fu Chen
- Scripps Research Translational Institute, La Jolla, CA, USA
- Department of Integrative Structural and Computational Biology, Scripps Research, La Jolla, CA, USA
| | - Sang Eun Lee
- Department of Cardiology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea
| | - Hossein Javedani Sadaei
- Scripps Research Translational Institute, La Jolla, CA, USA
- Department of Integrative Structural and Computational Biology, Scripps Research, La Jolla, CA, USA
| | - Jun-Bean Park
- Department of Internal Medicine, Seoul National University Hospital, Seoul, Republic of Korea
- Cardiovascular Center, Seoul National University Hospital, Seoul, Republic of Korea
| | - Ahmed Khattab
- Scripps Research Translational Institute, La Jolla, CA, USA
- Department of Integrative Structural and Computational Biology, Scripps Research, La Jolla, CA, USA
| | - Jei-Fu Chen
- Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA
| | - Corneliu Henegar
- Scripps Research Translational Institute, La Jolla, CA, USA
- Department of Integrative Structural and Computational Biology, Scripps Research, La Jolla, CA, USA
| | - Nathan E Wineinger
- Scripps Research Translational Institute, La Jolla, CA, USA
- Department of Integrative Structural and Computational Biology, Scripps Research, La Jolla, CA, USA
| | - Evan D Muse
- Scripps Research Translational Institute, La Jolla, CA, USA
- Department of Integrative Structural and Computational Biology, Scripps Research, La Jolla, CA, USA
- Scripps Clinic, La Jolla, CA, USA
| | - Ali Torkamani
- Scripps Research Translational Institute, La Jolla, CA, USA.
- Department of Integrative Structural and Computational Biology, Scripps Research, La Jolla, CA, USA.
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20
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Shah ASV, Keene SJ, Pennells L, Kaptoge S, Kimenai DM, Walker M, Halley JD, Rocha S, Hoogeveen RC, Gudnason V, Bakker SJL, Wannamethee SG, Pareek M, Eggers KM, Jukema JW, Hankey GJ, deLemos JA, Ford I, Omland T, Lyngbakken MN, Psaty BM, deFilippi CR, Wood AM, Danesh J, Welsh P, Sattar N, Mills NL, Di Angelantonio E. Cardiac Troponins and Cardiovascular Disease Risk Prediction: An Individual-Participant-Data Meta-Analysis. J Am Coll Cardiol 2025; 85:1471-1484. [PMID: 40204376 DOI: 10.1016/j.jacc.2025.02.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/23/2024] [Revised: 02/06/2025] [Accepted: 02/07/2025] [Indexed: 04/11/2025]
Abstract
BACKGROUND The extent to which high-sensitivity cardiac troponin can predict cardiovascular disease (CVD) is uncertain. OBJECTIVES We aimed to quantify the potential advantage of adding information on cardiac troponins to conventional risk factors in the prevention of CVD. METHODS We meta-analyzed individual-participant data from 15 cohorts, comprising 62,150 participants without prior CVD. We calculated HRs, measures of risk discrimination, and reclassification after adding cardiac troponin T (cTnT) or I (cTnI) to conventional risk factors. The primary outcome was first-onset CVD (ie, coronary heart disease or stroke). We then modeled the implications of initiating statin therapy using incidence rates from 2.1 million individuals from the United Kingdom. RESULTS Among participants with cTnT or cTnI measurements, 8,133 and 3,749 incident CVD events occurred during a median follow-up of 11.8 and 9.8 years, respectively. HRs for CVD per 1-SD higher concentration were 1.31 (95% CI: 1.25-1.37) for cTnT and 1.26 (95% CI: 1.19-1.33) for cTnI. Addition of cTnT or cTnI to conventional risk factors was associated with C-index increases of 0.015 (95% CI: 0.012-0.018) and 0.012 (95% CI: 0.009-0.015) and continuous net reclassification improvements of 6% and 5% in cases and 22% and 17% in noncases. One additional CVD event would be prevented for every 408 and 473 individuals screened based on statin therapy in those whose CVD risk is reclassified from intermediate to high risk after cTnT or cTnI measurement, respectively. CONCLUSIONS Measurement of cardiac troponin results in a modest improvement in the prediction of first-onset CVD that may translate into population health benefits if used at scale.
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Affiliation(s)
- Anoop S V Shah
- Department of Non-Communicable Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, United Kingdom; Department of Cardiology, Imperial College NHS Trust, London, United Kingdom
| | - Spencer J Keene
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom; National Institute for Health and Care Research Blood and Transplant Research Unit in Donor Health and Behaviour, University of Cambridge, Cambridge, United Kingdom.
| | - Lisa Pennells
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom
| | - Stephen Kaptoge
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom
| | - Dorien M Kimenai
- British Heart Foundation Centre for Cardiovascular Science, University of Edinburgh, Edinburgh, United Kingdom
| | - Matthew Walker
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom
| | - Julianne D Halley
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom
| | - Sara Rocha
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom
| | - Ron C Hoogeveen
- Department of Medicine, Baylor College of Medicine, Houston, Texas, USA
| | - Vilmundur Gudnason
- Icelandic Heart Association, Kopavogur, Iceland; Faculty of Medicine, University of Iceland, Reykjavik, Iceland
| | - Stephan J L Bakker
- Department of Internal Medicine, University Medical Center Groningen, University of Groningen, Groningen, the Netherlands
| | | | - Manan Pareek
- Center for Translational Cardiology and Pragmatic Randomized Trials, Department of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark; Department of Cardiology, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark
| | - Kai M Eggers
- Department of Medical Sciences, Uppsala University, Uppsala, Sweden
| | - J Wouter Jukema
- Department of Cardiology, Leiden University Medical Center, Leiden, the Netherlands; Netherlands Heart Institute, Utrecht, the Netherlands
| | - Graeme J Hankey
- Centre for Neuromuscular and Neurological Diseases, The University of Western Australia, Perth, Western Australia, Australia; Perron Institute for Neurological and Translational Science, Perth, Western Australia, Australia
| | - James A deLemos
- UT Southwestern Medical Center, Cardiology, Dallas, Texas, USA
| | - Ian Ford
- Robertson Centre for Biostatistics, University of Glasgow, Glasgow, United Kingdom
| | - Torbjørn Omland
- K. G. Jebsen Center for Cardiac Biomarkers, Institute of Clinical Medicine, University of Oslo, Oslo, Norway; Department of Cardiology, Akershus University Hospital, Lørenskog, Norway
| | - Magnus Nakrem Lyngbakken
- K. G. Jebsen Center for Cardiac Biomarkers, Institute of Clinical Medicine, University of Oslo, Oslo, Norway; Department of Cardiology, Akershus University Hospital, Lørenskog, Norway
| | - Bruce M Psaty
- Cardiovascular Health Research Unit, Departments of Medicine, Epidemiology, and Health Systems and Population Health, University of Washington, Seattle, Washington, USA
| | | | - Angela M Wood
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom; National Institute for Health and Care Research Blood and Transplant Research Unit in Donor Health and Behaviour, University of Cambridge, Cambridge, United Kingdom; British Heart Foundation Centre of Research Excellence, University of Cambridge, Cambridge, United Kingdom; Health Data Research UK Cambridge, Wellcome Genome Campus and University of Cambridge, Cambridge, United Kingdom; Cambridge Centre of Artificial Intelligence in Medicine, Cambridge, United Kingdom; British Heart Foundation Data Science Centre, Health Data Research UK, London, United Kingdom
| | - John Danesh
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom; National Institute for Health and Care Research Blood and Transplant Research Unit in Donor Health and Behaviour, University of Cambridge, Cambridge, United Kingdom; British Heart Foundation Centre of Research Excellence, University of Cambridge, Cambridge, United Kingdom; Health Data Research UK Cambridge, Wellcome Genome Campus and University of Cambridge, Cambridge, United Kingdom; Department of Human Genetics, Wellcome Sanger Institute, Hinxton, United Kingdom
| | - Paul Welsh
- School of Cardiovascular and Metabolic Health, University of Glasgow, Glasgow, United Kingdom
| | - Naveed Sattar
- School of Cardiovascular and Metabolic Health, University of Glasgow, Glasgow, United Kingdom
| | - Nicholas L Mills
- British Heart Foundation Centre for Cardiovascular Science, University of Edinburgh, Edinburgh, United Kingdom; Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Emanuele Di Angelantonio
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom; Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Cambridge, United Kingdom; National Institute for Health and Care Research Blood and Transplant Research Unit in Donor Health and Behaviour, University of Cambridge, Cambridge, United Kingdom; British Heart Foundation Centre of Research Excellence, University of Cambridge, Cambridge, United Kingdom; Health Data Research UK Cambridge, Wellcome Genome Campus and University of Cambridge, Cambridge, United Kingdom; Health Data Science Research Centre, Human Technopole, Milan, Italy
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21
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Haines KL, Li R, Grey S, Kim HE, Gann E, Almond C, Rouse M, Joshi M, Schobel-McHugh S, Agarwal S, Kirk A, Elster E, Fernandez-Moure JS. Exploratory cluster analysis of IL2Ra and associated biomarkers and complications after blunt chest trauma. J Trauma Acute Care Surg 2025:01586154-990000000-00963. [PMID: 40223169 DOI: 10.1097/ta.0000000000004568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/15/2025]
Abstract
BACKGROUND Rib fractures compromise approximately 40% of all fractures in the United States. Despite their prevalence, the relationship between rib fractures, solid organ injuries, and immune responses remains poorly understood. This exploratory study investigates the immunological profile associated with pulmonary and renal complications in rib fracture patients using data from our Surgical Critical Care Initiative Clinical Data Repository. The aim is to correlate distinct cytokine/chemokine profiles with high-energy rib fracture patterns, such as first rib fracture, and associated complications, potentially providing predictive biomarkers for patient outcomes. METHODS Clinical and demographic data on patients with rib fractures were extracted from Surgical Critical Care Initiative Clinical Data Repository. Patients were categorized based on the presence or absence of complications. A comprehensive panel of 46 inflammation and tissue repair biomarkers was measured using the Meso Scale Discovery platforms. Principal component analysis was used to reduce the dimensionality of the cytokine data. Statistical and machine learning models assessed the association between biomarker patterns, rib fracture localization, and complications. Logistic regression models with high discriminative performance were developed for first rib fractures (high energy transfer), lung injury, and pneumonia. RESULTS Among 150 rib fracture patients, 73 had complications. Cytokine analysis revealed two distinct clusters: Cluster 1, associated with pro-inflammatory responses and tissue repair, and Cluster 2, linked with anti-inflammatory responses, angiogenesis, and immunometabolism. Predictive models demonstrated strong validity (area under the curve, >0.90) and identified key variables such as the cytokine IL2Ra, significantly associated with acute kidney injury, acute lung injury, and pulmonary complications post-rib fractures, particularly first rib fractures. CONCLUSION IL2Ra release is significantly correlated with high-energy transfer injuries like first rib fractures, indicating a bidirectional relationship between these fractures and the immune response. Furthermore, a hierarchical relationship exists among clinical complications, with kidney and lung injuries frequently preceding pneumonia. These findings underscore the potential utility of integrating immunological markers into clinical decision-support frameworks for personalized therapeutic interventions. LEVEL OF EVIDENCE Prognostic; Level III.
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Affiliation(s)
- Krista L Haines
- From the Division of Trauma and Acute Care Surgery, Department of Surgery (K.L.H., S.A., J.S.F.-M.), Duke University Medical Center, Durham, North Carolina; Department of Surgery (R.L., S.G., H.E.K., E.G., M.R., S.S.-M.), Uniformed Services University of the Health Sciences; Henry M. Jackson Foundation for the Advancement of Military Medicine (R.L., S.G., H.E.K., E.G., M.R., S.S.-M., E.E.), Bethesda, Maryland; Surgical Critical Care Initiative (K.L.H., R.L., S.G., H.E.K., E.G., C.A., M.R., M.J., S.S.-M., S.A., A.K., E.E., J.S.F.-M.), Bethesda, Maryland; Clinical Research Institute (C.A.), Substrate Services Core Research Support (M.J.), and Department of Surgery (A.K.), Duke University, Durham, North Carolina; and Walter Reed National Military Medical Center (E.E.), Bethesda, Maryland
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22
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Yang M, Zhang R, Li Y, Ma F, Jia W, Yu T. Development of clinical inflammatory models to predict the efficacy of neoadjuvant chemoradiotherapy and survival in patients with locally advanced rectal cancer: a retrospective study. Int J Colorectal Dis 2025; 40:92. [PMID: 40316764 PMCID: PMC12048431 DOI: 10.1007/s00384-025-04875-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 03/25/2025] [Indexed: 05/04/2025]
Abstract
AIM To assess the ability of clinical inflammatory models to predict tumor regression grade (TRG) in response to neoadjuvant chemoradiotherapy (NCRT) and survival in patients with locally advanced rectal cancer (LARC). METHODS We retrospectively analyzed 161 patients with LARC who underwent NCRT followed by total mesorectal excision at Beijing Hospital between May 2007 and March 2022. By using logistic and Cox regression analyses, we developed prediction models for TRG in response to NCRT and overall survival (OS), respectively. RESULTS Multivariable logistic regression analysis indicated that variations in neutrophil, lymphocyte, and monocyte counts and pre-NCRT (preneoadjuvant chemoradiotherapy) CA19 - 9 levels independently predicted TRG in response to NCRT (all P < 0.05). Multivariate Cox regression analysis revealed that clinical tumor (cT) stage, pre-NCRT platelet count, CA19 - 9 level, number of lymph node metastases, and TRG could independently predict OS (all P < 0.05). On the basis of these results, we developed models to predict TRG and OS, respectively. The final predictive model for predicting the response to NCRT had areas under the curve (AUCs) of 0.783 and 0.809 in the training and testing cohorts, respectively; for predicting the 5-year OS rate, the AUC rates were 0.842 and 0.930 in the training and test sets, respectively. The calibration and decision curves showed favorable performance in our prediction models. CONCLUSION We combined inflammatory markers with tumor characteristics and successfully developed clinical prediction models for TRG in response to NCRT and OS in patients with LARC. Our findings offer insights for optimizing treatment in patients with LARC.
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Affiliation(s)
- Min Yang
- Department of General Surgery, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Graduate School of Peking Union Medical College, Chinese Academy of Medical Sciences, 100730, Beijing, People's Republic of China
| | - Ruoyu Zhang
- Department of Hepatobiliary Surgery, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17 Panjiayuan Nanli Area, Beijing, Chaoyang District, China
| | - Yao Li
- Department of General Surgery, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Graduate School of Peking Union Medical College, Chinese Academy of Medical Sciences, 100730, Beijing, People's Republic of China
| | - Fuhai Ma
- Department of General Surgery, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Graduate School of Peking Union Medical College, Chinese Academy of Medical Sciences, 100730, Beijing, People's Republic of China
| | - Wenzhuo Jia
- Department of General Surgery, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Graduate School of Peking Union Medical College, Chinese Academy of Medical Sciences, 100730, Beijing, People's Republic of China
| | - Tao Yu
- Department of General Surgery, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Graduate School of Peking Union Medical College, Chinese Academy of Medical Sciences, 100730, Beijing, People's Republic of China.
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Menzaghi C, Copetti M, Mantzoros CS, Trischitta V. Prediction models for the implementation of precision medicine in the real world. Some critical issues. Metabolism 2025:156257. [PMID: 40187402 DOI: 10.1016/j.metabol.2025.156257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/31/2025] [Accepted: 03/31/2025] [Indexed: 04/07/2025]
Affiliation(s)
- Claudia Menzaghi
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico "Casa Sollievo della Sofferenza", 71013 San Giovanni Rotondo, Italy
| | - Massimiliano Copetti
- Unit of Biostatistics, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico "Casa Sollievo della Sofferenza", 71013 San Giovanni Rotondo, Italy
| | - Christos S Mantzoros
- Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA
| | - Vincenzo Trischitta
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico "Casa Sollievo della Sofferenza", 71013 San Giovanni Rotondo, Italy.
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Wei Y, Jagtap JM, Singh Y, Khosravi B, Cai J, Gunter JL, Erickson BJ. Comprehensive Segmentation of Gray Matter Structures on T1-Weighted Brain MRI: A Comparative Study of Convolutional Neural Network, Convolutional Neural Network Hybrid-Transformer or -Mamba Architectures. AJNR Am J Neuroradiol 2025; 46:742-749. [PMID: 39433334 PMCID: PMC11979858 DOI: 10.3174/ajnr.a8544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Accepted: 10/08/2024] [Indexed: 10/23/2024]
Abstract
BACKGROUND AND PURPOSE Recent advances in deep learning have shown promising results in medical image analysis and segmentation. However, most brain MRI segmentation models are limited by the size of their data sets and/or the number of structures they can identify. This study evaluates the performance of 6 advanced deep learning models in segmenting 122 brain structures from T1-weighted MRI scans, aiming to identify the most effective model for clinical and research applications. MATERIALS AND METHODS A total of 1510 T1-weighted MRIs were used to compare 6 deep learning models for the segmentation of 122 distinct gray matter structures: nnU-Net, SegResNet, SwinUNETR, UNETR, U-Mamba_BOT, and U-Mamba_ Enc. Each model was rigorously tested for accuracy by using the dice similarity coefficient (DSC) and the 95th percentile Hausdorff distance (HD95). Additionally, the volume of each structure was calculated and compared between normal controls (NCs) and patients with Alzheimer disease (AD). RESULTS U-Mamba_Bot achieved the highest performance with a median DSC of 0.9112 (interquartile range [IQR]: 0.8957, 0.9250). nnU-Net achieved a median DSC of 0.9027 [IQR: 0.8847, 0.9205], and had the highest HD95 of 1.392 [IQR: 1.174, 2.029]. The value of each HD95 (<3 mm) indicates its superior capability in capturing detailed brain structures accurately. Following segmentation, volume calculations were performed, and the resultant volumes of NCs and patients with AD were compared. The volume changes observed in 13 brain substructures were all consistent with those reported in existing literature, reinforcing the reliability of the segmentation outputs. CONCLUSIONS This study underscores the efficacy of U-Mamba_Bot as a robust tool for detailed brain structure segmentation in T1-weighted MRI scans. The congruence of our volumetric analysis with the literature further validates the potential of advanced deep learning models to enhance the understanding of neurodegenerative diseases such as AD. Future research should consider larger data sets to validate these findings further and explore the applicability of these models in other neurologic conditions.
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Affiliation(s)
- Yujia Wei
- From the Department of Radiology, Mayo Clinic, Rochester, Minnesota
| | | | - Yashbir Singh
- From the Department of Radiology, Mayo Clinic, Rochester, Minnesota
| | - Bardia Khosravi
- From the Department of Radiology, Mayo Clinic, Rochester, Minnesota
| | - Jason Cai
- From the Department of Radiology, Mayo Clinic, Rochester, Minnesota
| | - Jeffrey L Gunter
- From the Department of Radiology, Mayo Clinic, Rochester, Minnesota
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Gamada H, Tatsumura M, Asada T, Okuwaki S, Nagashima K, Takeuchi Y, Funayama T, Yamazaki M. Novel Predictive Scoring System for Bone Union Rate After Conservative Management of Lumbar Spondylolysis. Spine (Phila Pa 1976) 2025; 50:463-469. [PMID: 38975790 DOI: 10.1097/brs.0000000000005094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Accepted: 06/27/2024] [Indexed: 07/09/2024]
Abstract
STUDY DESIGN A single-center retrospective cohort study. OBJECTIVES To develop a predictive scoring system for bone union after conservative treatment of lumbar spondylolysis and assess its internal validity. SUMMARY OF BACKGROUND DATA Lumbar spondylolysis, a common stress fracture in young athletes, is typically treated conservatively. Predicting bone union rates remains a challenge. METHODS This study included patients aged 18 years or younger with lumbar spondylolysis undergoing conservative treatment. A multivariable logistic regression analysis was used to develop a scoring system containing 6 factors: sex, age, lesion level, main side stage of the lesion, contralateral side stage of the lesion, and spina bifida occulta. The predictive scoring system was internally validated from the receiver operating characteristic (ROC) curve using bootstrap methods. RESULTS The final analysis included 301 patients with 416 lesions, with an overall bone union rate of 80%. On multivariable analysis, the main and contralateral stages were identified as factors associated with bone union. The predictive scoring system was developed from the main side stage score (prelysis, early=0, progressive stage=1) and the contralateral side stage score (none=0, prelysis, early, progressive stage=1, terminal stage=3). The area under the curve was 0.855 (95% confidence interval, 0.811-0.896) for the ROC curve, showing good internal validity. The predicted bone union rates were generally consistent with the actual rates. CONCLUSIONS A simple predictive scoring system was developed for bone union after conservative treatment of lumbar spondylolysis, based on the stage of the lesion on the main and contralateral sides. The predicted bone union rate was ~90% for a total score of 0-1 and ≤30% for a score of 3-4. This system demonstrated good internal validity, suggesting its potential as a useful tool in clinical decision-making for the management of spondylolysis.
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Affiliation(s)
- Hisanori Gamada
- Department of Orthopedic Surgery, Institute of Medicine, University of Tsukuba, Tsukuba, Japan
- Department of Orthopedic Surgery and Sports Medicine, Tsukuba University Hospital, Mito Clinical Education and Training Center/Mito Kyodo General Hospital, Mito, Japan
| | - Masaki Tatsumura
- Department of Orthopedic Surgery and Sports Medicine, Tsukuba University Hospital, Mito Clinical Education and Training Center/Mito Kyodo General Hospital, Mito, Japan
| | - Tomoyuki Asada
- Department of Orthopedic Surgery, Institute of Medicine, University of Tsukuba, Tsukuba, Japan
| | - Shun Okuwaki
- Department of Orthopedic Surgery, Institute of Medicine, University of Tsukuba, Tsukuba, Japan
| | - Katsuya Nagashima
- Department of Orthopedic Surgery and Sports Medicine, Tsukuba University Hospital, Mito Clinical Education and Training Center/Mito Kyodo General Hospital, Mito, Japan
| | - Yosuke Takeuchi
- Department of Orthopedic Surgery and Sports Medicine, Tsukuba University Hospital, Mito Clinical Education and Training Center/Mito Kyodo General Hospital, Mito, Japan
| | - Toru Funayama
- Department of Orthopedic Surgery, Institute of Medicine, University of Tsukuba, Tsukuba, Japan
| | - Masashi Yamazaki
- Department of Orthopedic Surgery, Institute of Medicine, University of Tsukuba, Tsukuba, Japan
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Kareemi H, Yadav K, Price C, Bobrovitz N, Meehan A, Li H, Goel G, Masood S, Grant L, Ben-Yakov M, Michalowski W, Vaillancourt C. Artificial intelligence-based clinical decision support in the emergency department: A scoping review. Acad Emerg Med 2025; 32:386-395. [PMID: 39905631 DOI: 10.1111/acem.15099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Accepted: 12/27/2024] [Indexed: 02/06/2025]
Abstract
OBJECTIVE Artificial intelligence (AI)-based clinical decision support (CDS) has the potential to augment high-stakes clinical decisions in the emergency department (ED). However, its current usage and translation to implementation remains poorly understood. We asked: (1) What is the current landscape of AI-CDS for individual patient care in the ED? and (2) What phases of development have AI-CDS tools achieved? METHODS We performed a scoping review of AI for prognostic, diagnostic, and treatment decisions regarding individual ED patient care. We searched five databases (MEDLINE, EMBASE, Cochrane Central, Scopus, Web of Science) and gray literature sources from January 1, 2010, to December 11, 2023. We adhered to guidelines from the Joanna Briggs Institute and PRISMA Extension for Scoping Reviews. We published our protocol on Open Science Framework (DOI 10.17605/OSF.IO/FDZ3Y). RESULTS Of 5168 unique records identified, we selected 605 studies for inclusion. The majority (369, 61%) were published in 2021-2023. The studies ranged over a variety of clinical applications, patient populations, and AI model types. Prognostic outcomes were most commonly assessed (270, 44.6%), followed by diagnostic (193, 31.9%) and disposition (115, 19%). Most studies remained in the earliest phase of preclinical development (572, 94.5%) with few advancing to later phases (33, 5.5%). CONCLUSIONS By thoroughly mapping the landscape of AI-CDS in the ED, we demonstrate a rapidly increasing volume of studies covering a breadth of clinical applications, yet few have achieved advanced phases of testing or implementation. A more granular understanding of the barriers and facilitators to implementing AI-CDS in the ED is needed.
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Affiliation(s)
- Hashim Kareemi
- Department of Emergency Medicine, University of British Columbia, Vancouver, British Columbia, Canada
- School of Epidemiology and Public Health, University of Ottawa, Ottawa, Ontario, Canada
| | - Krishan Yadav
- School of Epidemiology and Public Health, University of Ottawa, Ottawa, Ontario, Canada
- Department of Emergency Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Ottawa Hospital Research Institute, University of Ottawa, Ottawa, Ontario, Canada
| | - Courtney Price
- Department of Emergency Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Niklas Bobrovitz
- Department of Emergency Medicine, University of Calgary, Calgary, Alberta, Canada
- Centre for Health Informatics, University of Calgary, Calgary, Alberta, Canada
| | - Andrew Meehan
- Department of Emergency Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Henry Li
- Department of Emergency Medicine, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Alberta, Canada
- Division of Pediatrics, Department of Pediatrics, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Alberta, Canada
| | - Gautam Goel
- Department of Emergency Medicine, Queensway Carleton Hospital, Ottawa, Ontario, Canada
- Whiting School of Engineering, Johns Hopkins University, Baltimore, Maryland, USA
| | - Sameer Masood
- Department of Medicine, University of Toronto, Toronto, Ontario, Canada
- Toronto General Hospital Research Institute, University Health Network, Toronto, Ontario, Canada
| | - Lars Grant
- Department of Emergency Medicine, McGill University, Montreal, Quebec, Canada
- Lady Davis Institute for Medical Research, Montreal, Quebec, Canada
| | - Maxim Ben-Yakov
- Department of Medicine, University of Toronto, Toronto, Ontario, Canada
- Toronto General Hospital Research Institute, University Health Network, Toronto, Ontario, Canada
| | - Wojtek Michalowski
- Telfer School of Management, University of Ottawa, Ottawa, Ontario, Canada
| | - Christian Vaillancourt
- School of Epidemiology and Public Health, University of Ottawa, Ottawa, Ontario, Canada
- Department of Emergency Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Ottawa Hospital Research Institute, University of Ottawa, Ottawa, Ontario, Canada
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Stolze A, Vernooij L, de Korte-de Boer D, Hollmann MW, Buhre WFFA, Boer C, Noordzij PG. Performance of the early warning system score in predicting postoperative complications in older versus younger patients. Perioper Med (Lond) 2025; 14:39. [PMID: 40165340 PMCID: PMC11959713 DOI: 10.1186/s13741-025-00516-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2024] [Accepted: 03/03/2025] [Indexed: 04/02/2025] Open
Abstract
BACKGROUND Early warning system (EWS) scores are implemented on surgical wards to identify patients at high risk of postoperative clinical deterioration, but its predictive value in older patients is unclear. This study assessed the prognostic value of EWS scores to predict severe postoperative complications in older patients compared to younger patients. METHODS This study utilized data from the TRACE study. EWS scores were routinely measured on postoperative days one (POD1) and three (POD3). The cohort was divided by age: < 70 years and ≥ 70 years. Performance measures of EWS scores on POD1 and POD3 were assessed to predict severe postoperative complications. Missed event rates (proportion of events not detected by the EWS threshold) and nonevent rates (proportion of EWS values above the threshold without an adverse event) were calculated. RESULTS Among 4866 patients, 39.3% were ≥ 70 years old. Severe complications occurred in 6.1% of older compared to 5.8% of younger patients (P = 0.658). EWS scores on POD1 and POD3 did not differ between age groups. For severe complications, EWS showed moderate discrimination in both older (POD1: C-statistic 0.65 (95%CI 0.59-0.70); POD3: 0.63 (95%CI 0.57-0.69)) and younger patients (POD1: 0.68 (95%CI 0.65-0.72); POD3: 0.65 (95%CI 0.61-0.70)). Overall, calibration was good. For EWS score ≥ 3, the missed event rate was at least 69% and nonevent rate 75%. CONCLUSIONS Predicted performance of the EWS score was moderate among older and younger patients. A limitation of the EWS score is the high rate of missed events and nonevents.
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Affiliation(s)
- Annick Stolze
- Department of Anesthesiology, Amsterdam UMC location Vrije Universiteit Amsterdam, De Boelelaan 1117, 1081 HV, Amsterdam, The Netherlands.
| | - Lisette Vernooij
- Department Anesthesiology, Intensive Care and Pain Management, St. Antonius Hospital Nieuwegein, Koekoekslaan 1, 3435 CM, Nieuwegein, The Netherlands
- Department of Intensive Care and Emergency Medicine, University Medical Center Utrecht, Utrecht University, Heidelberglaan 100, 3584 CX, Utrecht, The Netherlands
| | - Dianne de Korte-de Boer
- Department of Anesthesiology and Pain Medicine, Maastricht University Medical Centre+, P. Debyelaan 25, 6229 HX, Maastricht, The Netherlands
| | - Markus W Hollmann
- Department of Anesthesiology, Amsterdam UMC location University of Amsterdam, Meibergdreef 9, 1105 AZ, Amsterdam, The Netherlands
| | - Wolfgang F F A Buhre
- Department of Intensive Care and Emergency Medicine, University Medical Center Utrecht, Utrecht University, Heidelberglaan 100, 3584 CX, Utrecht, The Netherlands
| | - Christa Boer
- Department of Anesthesiology, Amsterdam UMC location Vrije Universiteit Amsterdam, De Boelelaan 1117, 1081 HV, Amsterdam, The Netherlands
| | - Peter G Noordzij
- Department Anesthesiology, Intensive Care and Pain Management, St. Antonius Hospital Nieuwegein, Koekoekslaan 1, 3435 CM, Nieuwegein, The Netherlands
- Department of Intensive Care and Emergency Medicine, University Medical Center Utrecht, Utrecht University, Heidelberglaan 100, 3584 CX, Utrecht, The Netherlands
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Li B, Khan H, Shaikh F, Zamzam A, Abdin R, Qadura M. Prediction of Major Adverse Limb Events in Females with Peripheral Artery Disease using Blood-Based Biomarkers and Clinical Features. J Cardiovasc Transl Res 2025; 18:316-330. [PMID: 39643751 DOI: 10.1007/s12265-024-10574-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Accepted: 11/13/2024] [Indexed: 12/09/2024]
Abstract
The objective of this study was to identify a female-specific prognostic biomarker for peripheral artery disease (PAD) and develop a prediction model for 2-year major adverse limb events (MALE). Patients with/without PAD were recruited (n=461). Plasma concentrations of 68 circulating proteins were measured and patients were followed for 2 years. The primary outcome was MALE (composite of vascular intervention, major amputation, or acute/chronic limb threatening ischemia). We trained a random forest model using: 1) clinical characteristics, 2) female-specific PAD biomarker, and 3) clinical characteristics and female-specific PAD biomarker. Galectin-9 was the only protein to be significantly elevated in females compared to males in the discovery/validation analyses. The random forest model achieved the following AUROC's: 0.72 (clinical features), 0.83 (Galectin-9), and 0.86 (clinical features + Galectin-9). We identified Galectin-9 as a female-specific PAD biomarker and developed an accurate prognostic model for 2-year MALE using a combination of clinical features and plasma Galectin-9 levels.
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Affiliation(s)
- Ben Li
- Department of Surgery, University of Toronto, Toronto, Canada
- Division of Vascular Surgery, St. Michael's Hospital, Unity Health Toronto, University of Toronto, 30 Bond Street, Suite 7-076, Toronto, Ontario, M5B 1W8, Canada
- Institute of Medical Science, University of Toronto, Toronto, Canada
- Temerty Centre for Artificial Intelligence Research and Education in Medicine (T-CAIREM), University of Toronto, Toronto, Canada
| | - Hamzah Khan
- Division of Vascular Surgery, St. Michael's Hospital, Unity Health Toronto, University of Toronto, 30 Bond Street, Suite 7-076, Toronto, Ontario, M5B 1W8, Canada
- Institute of Medical Science, University of Toronto, Toronto, Canada
| | - Farah Shaikh
- Division of Vascular Surgery, St. Michael's Hospital, Unity Health Toronto, University of Toronto, 30 Bond Street, Suite 7-076, Toronto, Ontario, M5B 1W8, Canada
| | - Abdelrahman Zamzam
- Division of Vascular Surgery, St. Michael's Hospital, Unity Health Toronto, University of Toronto, 30 Bond Street, Suite 7-076, Toronto, Ontario, M5B 1W8, Canada
| | - Rawand Abdin
- Department of Medicine, McMaster University, Hamilton, Canada
| | - Mohammad Qadura
- Department of Surgery, University of Toronto, Toronto, Canada.
- Division of Vascular Surgery, St. Michael's Hospital, Unity Health Toronto, University of Toronto, 30 Bond Street, Suite 7-076, Toronto, Ontario, M5B 1W8, Canada.
- Institute of Medical Science, University of Toronto, Toronto, Canada.
- Li Ka Shing Knowledge Institute, St. Michael's Hospital, Unity Health Toronto, University of Toronto, Toronto, Canada.
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Goh V, Mallett S, Rodriguez-Justo M, Boulter V, Glynne-Jones R, Khan S, Lessels S, Patel D, Prezzi D, Taylor S, Halligan S. Evaluation of prognostic models to improve prediction of metastasis in patients following potentially curative treatment for primary colorectal cancer: the PROSPECT trial. Health Technol Assess 2025; 29:1-91. [PMID: 40230305 PMCID: PMC12010235 DOI: 10.3310/btmt7049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2025] Open
Abstract
Background Despite apparently curative treatment, many patients with colorectal cancer develop subsequent metastatic disease. Current prognostic models are criticised because they are based on standard staging and omit novel biomarkers. Improved prognostication is an unmet need. Objectives To improve prognostication for colorectal cancer by developing a baseline multivariable model of standard clinicopathological predictors, and to then improve prediction via addition of promising novel imaging, genetic and immunohistochemical biomarkers. Design Prospective multicentre cohort. Setting Thirteen National Health Service hospitals. Participants Consecutive adult patients with colorectal cancer. Interventions Collection of prespecified standard clinicopathological variables and more novel imaging, genetic and immunohistochemical biomarkers, followed by 3-year follow-up to identify postoperative metastasis. Main outcome Best multivariable prognostic model including perfusion computed tomography compared with tumour/node staging. Secondary outcomes: Additive benefit of perfusion computed tomography and other biomarkers to best baseline model comprising standard clinicopathological predictors; measurement variability between local and central review; biological relationships between perfusion computed tomography and pathology variables. Results Between 2011 and 2016, 448 participants were recruited; 122 (27%) were withdrawn, leaving 326 (226 male, 100 female; mean ± standard deviation 66 ± 10.7 years); 183 (56%) had rectal cancer. Most cancers were locally advanced [≥ T3 stage, 227 (70%)]; 151 (46%) were node-positive (≥ N1 stage); 306 (94%) had surgery; 79 (24%) had neoadjuvant therapy. The resection margin was positive in 15 (5%); 93 (28%) had venous invasion; 125 (38%) had postoperative adjuvant chemotherapy; 81 (25%, 57 male) developed recurrent disease. Prediction of recurrent disease by the baseline clinicopathological time-to-event Weibull multivariable model (age, sex, tumour/node stage, tumour size and location, treatment, venous invasion) was superior to tumour/node staging: sensitivity: 0.57 (95% confidence interval 0.45 to 0.68), specificity 0.74 (95% confidence interval 0.68 to 0.79) versus sensitivity 0.56 (95% confidence interval 0.44 to 0.67), specificity 0.58 (95% confidence interval 0.51 to 0.64), respectively. Addition of perfusion computed tomography variables did not improve prediction significantly: c-statistic: 0.77 (95% confidence interval 0.71 to 0.83) versus 0.76 (95% confidence interval 0.70 to 0.82). Perfusion computed tomography parameters did not differ significantly between patients with and without recurrence (e.g. mean ± standard deviation blood flow of 60.3 ± 24.2 vs. 61.7 ± 34.2 ml/minute/100 ml). Furthermore, baseline model prediction was not improved significantly by the addition of any novel genetic or immunohistochemical biomarkers. We observed variation between local and central computed tomography measurements but neither improved model prediction significantly. We found no clear association between perfusion computed tomography variables and any immunohistochemical measurement or genetic expression. Limitations The number of patients developing metastasis was lower than expected from historical data. Our findings should not be overinterpreted. While the baseline model was superior to tumour/node staging, any clinical utility needs definition in daily practice. Conclusions A prognostic model of standard clinicopathological variables outperformed tumour/node staging, but novel biomarkers did not improve prediction significantly. Biomarkers that appear promising in small single-centre studies may contribute nothing substantial to prognostication when evaluated rigorously. Future work It would be desirable for other researchers to externally evaluate the baseline model. Trial registration This trial is registered as ISRCTN95037515. Funding This award was funded by the National Institute for Health and Care Research (NIHR) Health Technology Assessment programme (NIHR award ref: 09/22/49) and is published in full in Health Technology Assessment; Vol. 29, No. 8. See the NIHR Funding and Awards website for further award information.
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Affiliation(s)
- Vicky Goh
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK
| | | | | | | | | | | | - Sarah Lessels
- Scottish Clinical Trials Research Unit (SCTRU), NHS National Services Scotland, Edinburgh, Scotland
| | - Dominic Patel
- Research Department of Pathology, UCL Cancer Institute, London, UK
| | - Davide Prezzi
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK
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Yang Y, Dang Z, Tang L, Lu P, Ma S, Hou J, Pan ZY, Lau WY, Zhou WP. Nomogram for prediction of severe postoperative complications in elective hepato-pancreato-biliary surgery after COVID-19 breakthrough infection: A large multicenter study. Hepatobiliary Pancreat Dis Int 2025; 24:147-156. [PMID: 39414401 DOI: 10.1016/j.hbpd.2024.09.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Accepted: 08/27/2024] [Indexed: 10/18/2024]
Abstract
BACKGROUND Currently, there is a deficiency in a strong risk prediction framework for precisely evaluating the likelihood of severe postoperative complications in patients undergoing elective hepato-pancreato-biliary surgery subsequent to experiencing breakthrough infection of coronavirus disease 2019 (COVID-19). This study aimed to find factors predicting postoperative complications and construct an innovative nomogram to pinpoint patients who were susceptible to developing severe complications following breakthrough infection of COVID-19 after undergoing elective hepato-pancreato-biliary surgery. METHODS This multicenter retrospective cohort study included consecutive patients who underwent elective hepato-pancreato-biliary surgeries between January 3 and April 1, 2023 from four hospitals in China. All of these patients had experienced breakthrough infection of COVID-19 prior to their surgeries. Additionally, two groups of patients without preoperative COVID-19 infection were included as comparative controls. Surgical complications were meticulously documented and evaluated using the comprehensive complication index (CCI), which ranged from 0 (uneventful course) to 100 (death). A CCI value of 20.9 was identified as the threshold for defining severe complications. RESULTS Among 2636 patients who were included in this study, 873 were included in the reference group I, 941 in the reference group II, 389 in the internal cohort, and 433 in the external validation cohort. Multivariate logistic regression analysis revealed that completing a full course of COVID-19 vaccination > 6 months before surgery, undergoing surgery within 4 weeks of diagnosis of COVID-19 breakthrough infection, operation duration of 4 h or longer, cancer-related surgery, and major surgical procedures were significantly linked to a CCI > 20.9. A nomogram model was constructed utilizing CCI > 20.9 in the training cohort [area under the curve (AUC): 0.919, 95% confidence interval (CI): 0.881-0.957], the internal validation cohort (AUC: 0.910, 95% CI: 0.847-0.973), and the external validation cohort (AUC: 0.841, 95% CI: 0.799-0.883). The calibration curve for the probability of CCI > 20.9 demonstrated good agreement between the predictions made by the nomogram and the actual observations. CONCLUSIONS The developed model holds significant potential in aiding clinicians with clinical decision-making and risk stratification for patients who have experienced breakthrough infection of COVID-19 prior to undergoing elective hepato-pancreato-biliary surgery.
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Affiliation(s)
- Yun Yang
- The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai 200438, China
| | - Zheng Dang
- Department of Hepatobiliary Surgery, The 940th Hospital of Joint Logistics Support Force of Chinese PLA, Lanzhou 730050, China
| | - Liang Tang
- Department of Pancreatic-Biliary Surgery, Shanghai Changzheng Hospital, Naval Medical University, Shanghai 200003, China
| | - Peng Lu
- Department of Hepatobiliary Surgery, Hainan Hospital of Chinese PLA General Hospital, Sanya 572000, China
| | - Shang Ma
- Department of Hepatobiliary Surgery, The 940th Hospital of Joint Logistics Support Force of Chinese PLA, Lanzhou 730050, China
| | - Jin Hou
- National Key Laboratory of Medical Immunology & Institute of Immunology, Naval Medical University, Shanghai 200433, China
| | - Ze-Ya Pan
- The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai 200438, China
| | - Wan Yee Lau
- The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai 200438, China; Faculty of Medicine, the Chinese University of Hong Kong, Shatin, New Territories Hong Kong SAR, China
| | - Wei-Ping Zhou
- The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai 200438, China; Key Laboratory of Signaling Regulation and Targeting Therapy of Liver Cancer (Ministry of Education), Naval Medical University, Shanghai 200438, China; Shanghai Key Laboratory of Hepatobiliary Tumor Biology, Eastern Hepatobiliary Surgery Hospital, Shanghai 200438, China.
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Dirks I, Bossa MN, Berenguer AD, Mukherjee T, Sahli H, Deligiannis N, Verelst E, Ilsen B, Eyndhoven SV, Seyler L, Witdouck A, Darcis G, Guiot J, Giannakis A, Vandemeulebroucke J. Development and multicentric external validation of a prognostic COVID-19 severity model based on thoracic CT. BMC Med Inform Decis Mak 2025; 25:156. [PMID: 40170034 PMCID: PMC11963321 DOI: 10.1186/s12911-025-02983-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Accepted: 03/20/2025] [Indexed: 04/03/2025] Open
Abstract
BACKGROUND Risk stratification of COVID-19 patients can support therapeutic decisions, planning and resource allocation in the hospital. In times of high incidence, a prognostic model based on data efficiently retrieved from one source can enable fast decision support. METHODS A model was developed to identify patients at risk of developing severe COVID-19 within one month based on their age, sex and imaging features extracted from the thoracic computed tomography (CT). The model was trained on publicly available data from the Study of Thoracic CT in COVID-19 (STOIC) challenge and validated on unseen data from the same study and an external, multicentric dataset. The model, trained on data acquired before any variant of concern dominated, was assessed separately on data collected at later stages of the pandemic when the delta and omicron variants were most prevalent. RESULTS A logistic regression based on handcrafted features was found to perform on par with a direct deep learning approach, and the former was selected for simplicity. Volumetric and intensity-based features of lesions and healthy lung parenchyma proved most predictive, in addition to patient age and sex. The model reached an area under the curve of 0.78 on the challenge test set and 0.74 on the external test set. The performance did not drop for the subset acquired at a later stage of the pandemic. CONCLUSIONS A logistic regression utilizing features from thoracic CT and its metadata can provide rapid decision support by estimating short-term COVID-19 severity. Its stable performance underscores its potential for real-world clinical integration. By enabling rapid risk stratification using readily available imaging data, this approach can support early clinical decision-making, optimize resource allocation, and improve patient management, particularly during surges in COVID-19 cases. Furthermore, this study provides a foundation for future research on prognostic modelling in respiratory infections.
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Affiliation(s)
- Ine Dirks
- Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), Pleinlaan, Brussels, 1050, Belgium.
- imec, Kapeldreef, Leuven, 3001, Belgium.
| | - Matías Nicolás Bossa
- Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), Pleinlaan, Brussels, 1050, Belgium
| | - Abel Díaz Berenguer
- Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), Pleinlaan, Brussels, 1050, Belgium
| | - Tanmoy Mukherjee
- Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), Pleinlaan, Brussels, 1050, Belgium
| | - Hichem Sahli
- Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), Pleinlaan, Brussels, 1050, Belgium
- imec, Kapeldreef, Leuven, 3001, Belgium
| | - Nikos Deligiannis
- Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), Pleinlaan, Brussels, 1050, Belgium
- imec, Kapeldreef, Leuven, 3001, Belgium
| | - Emma Verelst
- Department of Radiology, Universitair Ziekenhuis Brussel, Vrije Universiteit Brussel (VUB), Laarbeeklaan, Jette, 1090, Belgium
| | - Bart Ilsen
- Department of Radiology, Universitair Ziekenhuis Brussel, Vrije Universiteit Brussel (VUB), Laarbeeklaan, Jette, 1090, Belgium
| | | | - Lucie Seyler
- Department of Internal Medicine and Infectiology, Vitality Research Group (MIPI), Universitair Ziekenhuis Brussel, Vrije Universiteit Brussel (VUB), Laarbeeklaan, Jette, 1090, Belgium
| | - Arne Witdouck
- Department of Internal Medicine and Infectiology, Vitality Research Group (MIPI), Universitair Ziekenhuis Brussel, Vrije Universiteit Brussel (VUB), Laarbeeklaan, Jette, 1090, Belgium
| | - Gilles Darcis
- Department of Infectious Diseases, University Hospital of Liège, Avenue de l'Hôpital, Liège, 4000, Belgium
| | - Julien Guiot
- Department of Pneumology, University Hospital of Liège, Avenue de l'Hôpital, Liège, 4000, Belgium
| | - Athanasios Giannakis
- Department of Diagnostic and Interventional Radiology, University Hospital of Heidelberg, Im Neuenheimer Feld, 69120, Heidelberg, Germany
- Translational Lung Research Center (TLRC), German Center for Lung Research (DZL), University of Heidelberg, Im Neuenheimer Feld, 69120, Heidelberg, Germany
- Second Department of Radiology, University General Hospital Attikon, National and Kapodistrian University of Athens, Panepistimiou, Athens, 157 72, Greece
| | - Jef Vandemeulebroucke
- Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), Pleinlaan, Brussels, 1050, Belgium
- imec, Kapeldreef, Leuven, 3001, Belgium
- Department of Radiology, Universitair Ziekenhuis Brussel, Vrije Universiteit Brussel (VUB), Laarbeeklaan, Jette, 1090, Belgium
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Visweswaran S, Sadhu EM, Morris MM, Vis AR, Samayamuthu MJ. Online database of clinical algorithms with race and ethnicity. Sci Rep 2025; 15:10913. [PMID: 40157976 PMCID: PMC11954862 DOI: 10.1038/s41598-025-94152-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 03/12/2025] [Indexed: 04/01/2025] Open
Abstract
Some clinical algorithms incorporate an individual's race, ethnicity, or both as an input variable or predictor in determining diagnoses, prognoses, treatment plans, or risk assessments. Inappropriate use of race and ethnicity in clinical algorithms at the point of care may exacerbate health disparities and promote harmful practices of race-based medicine. Using database analysis primarily, we identified 42 risk calculators that use race and ethnicity as predictors, five laboratory test results with reference ranges that differed based on race and ethnicity, one therapy recommendation based on race and ethnicity, 15 medications with race- and ethnicity-based initiation and monitoring guidelines, and five medical devices with differential racial and ethnic performances. Information on these clinical algorithms is freely available at https://www.clinical-algorithms-with-race-and-ethnicity.org/ . This resource aims to raise awareness about the use of race and ethnicity in clinical algorithms and track progress toward eliminating their inappropriate use. The database is actively updated to include clinical algorithms that were missed and additional characteristics of these algorithms.
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Affiliation(s)
- Shyam Visweswaran
- Department of Biomedical Informatics, University of Pittsburgh, 5607 Baum Boulevard, Pittsburgh, PA, USA.
- Intelligent Systems Program, University of Pittsburgh, Pittsburgh, PA, USA.
| | - Eugene M Sadhu
- Department of Biomedical Informatics, University of Pittsburgh, 5607 Baum Boulevard, Pittsburgh, PA, USA
| | - Michele M Morris
- Department of Biomedical Informatics, University of Pittsburgh, 5607 Baum Boulevard, Pittsburgh, PA, USA
| | - Anushka R Vis
- Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA
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Carlson DE, Chavarriaga R, Liu Y, Lotte F, Lu BL. The NERVE-ML (neural engineering reproducibility and validity essentials for machine learning) checklist: ensuring machine learning advances neural engineering . J Neural Eng 2025;22:021002. [PMID: 40073450 PMCID: PMC11948487 DOI: 10.1088/1741-2552/adbfbd] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2024] [Revised: 02/10/2025] [Accepted: 03/12/2025] [Indexed: 03/14/2025]
Abstract
Objective.Machine learning's (MLs) ability to capture intricate patterns makes it vital in neural engineering research. With its increasing use, ensuring the validity and reproducibility of ML methods is critical. Unfortunately, this has not always been the case in practice, as there have been recent retractions across various scientific fields due to the misuse of ML methods and validation procedures. To address these concerns, we propose the first version of the neural engineering reproducibility and validity essentials for ML (NERVE-ML) checklist, a framework designed to promote the transparent, reproducible, and valid application of ML in neural engineering.Approach.We highlight some of the unique challenges of model validation in neural engineering, including the difficulties from limited subject numbers, repeated or non-independent samples, and high subject heterogeneity. Through detailed case studies, we demonstrate how different validation approaches can lead to divergent scientific conclusions, highlighting the importance of selecting appropriate procedures guided by the NERVE-ML checklist. Effectively addressing these challenges and properly scoping scientific conclusions will ensure that ML contributes to, rather than hinders, progress in neural engineering.Main results.Our case studies demonstrate that improper validation approaches can result in flawed studies or overclaimed scientific conclusions, complicating the scientific discourse. The NERVE-ML checklist effectively addresses these concerns by providing guidelines to ensure that ML approaches in neural engineering are reproducible and lead to valid scientific conclusions.Significance.By effectively addressing these challenges and properly scoping scientific conclusions guided by the NERVE-ML checklist, we aim to help pave the way for a future where ML reliably enhances the quality and impact of neural engineering research.
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Affiliation(s)
- David E Carlson
- Department of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC, United States of America
- Department of Computer Science, Department of Civil and Environmental Engineering, Duke University, Durham, NC, United States of America
| | - Ricardo Chavarriaga
- Centre for Artificial Intelligence, School of Engineering, Zurich University of Applied Sciences ZHAW, Winterthur, Switzerland
| | - Yiling Liu
- Program in Computational Biology and Bioinformatics, Duke University School of Medicine, Durham, NC, United States of America
| | - Fabien Lotte
- Inria Center at the University of Bordeaux, Talence 33405, France
- LaBRI (CNRS/University Bordeaux/Bordeaux INP), Talence 33405, France
| | - Bao-Liang Lu
- Center for Brain-Like Computing and Machine Intelligence, Department of Computer Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, People’s Republic of China
- RuiJin-Mihoyo Laboratory, Clinical Neuroscience Center, RuiJin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200020, People’s Republic of China
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Fujii T, Murata K, Kohjitani H, Onishi A, Murakami K, Tanaka M, Yamamoto W, Nagai K, Yoshikawa A, Etani Y, Okita Y, Yoshida N, Amuro H, Okano T, Ueda Y, Okano T, Hara R, Hashimoto M, Morinobu A, Matsuda S. Predicting rheumatoid arthritis progression from seronegative undifferentiated arthritis using machine learning: a deep learning model trained on the KURAMA cohort and externally validated with the ANSWER cohort. Arthritis Res Ther 2025; 27:65. [PMID: 40140918 PMCID: PMC11938622 DOI: 10.1186/s13075-025-03541-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2025] [Accepted: 03/19/2025] [Indexed: 03/28/2025] Open
Abstract
BACKGROUND Undifferentiated arthritis (UA) often develops into rheumatoid arthritis (RA), but predicting disease progression from seronegative UA remains challenging because seronegative RA often does not meet the classification criteria. This study aims to build a machine learning (ML) model to predict the progression from seronegative UA to RA using clinical and laboratory parameters. METHODS KURAMA cohort (training dataset) and ANSWER cohort (validation dataset) were utilized. Patients with seronegative UA were selected based on specific inclusion and exclusion criteria. Clinical and laboratory parameters, including demographic data, acute phase reactants, autoantibodies, and physical examination findings, were collected. Various ML models, including a Feedforward Neural Network (FNN), were developed and compared. Model performance was evaluated using the area under the receiver operating characteristic curve (AUC), sensitivity, and other metrics. SHapley Additive exPlanations (SHAP) values were computed to interpret the importance of variables. RESULTS KURAMA cohort included 210 patients with seronegative UA, of whom 57 (27.1%) progressed to RA. The FNN model demonstrated the highest predictive performance with an AUC of 0.924 and a sensitivity of 80.7% in the training dataset. Validation with ANSWER cohort (140 patients; 32.1% progressed to RA) showed an AUC of 0.777, sensitivity of 77.8%. MMP-3 had the highest impact on the model. CONCLUSIONS The FNN model exhibited robust performance in predicting the progression of RA from seronegative UA and maintained substantial sensitivity in an independent validation cohort. This model using only clinical and laboratory parameters has potential for predicting RA progression in patients with seronegative UA.
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Affiliation(s)
- Takayuki Fujii
- Department of Advanced Medicine for Rheumatic Diseases, Graduate School of Medicine, Kyoto University, 54 Shogoin Kawaharacho, Sakyo, Kyoto, Japan.
- Department of Orthopaedic Surgery, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
| | - Koichi Murata
- Department of Advanced Medicine for Rheumatic Diseases, Graduate School of Medicine, Kyoto University, 54 Shogoin Kawaharacho, Sakyo, Kyoto, Japan
- Department of Orthopaedic Surgery, Graduate School of Medicine, Kyoto University, Kyoto, Japan
| | - Hirohiko Kohjitani
- Department of Biomedical Data Intelligence, Graduate School of Medicine, Kyoto University, Kyoto, Japan
| | - Akira Onishi
- Department of Advanced Medicine for Rheumatic Diseases, Graduate School of Medicine, Kyoto University, 54 Shogoin Kawaharacho, Sakyo, Kyoto, Japan
| | - Kosaku Murakami
- Center for Cancer Immunotherapy and Immunobiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan
| | - Masao Tanaka
- Department of Advanced Medicine for Rheumatic Diseases, Graduate School of Medicine, Kyoto University, 54 Shogoin Kawaharacho, Sakyo, Kyoto, Japan
| | - Wataru Yamamoto
- Department of Health Information Management, Kurashiki Sweet Hospital, Kurashiki, Japan
| | - Koji Nagai
- Department of Internal Medicine (IV), Osaka Medical and Pharmaceutical University, Takatsuki, Japan
| | - Ayaka Yoshikawa
- Department of Internal Medicine (IV), Osaka Medical and Pharmaceutical University, Takatsuki, Japan
| | - Yuki Etani
- Department of Sports Medical Biomechanics, Osaka University Graduate School of Medicine, Suita, Japan
| | - Yasutaka Okita
- Department of Respiratory Medicine and Clinical Immunology, Osaka University, Suita, Japan
| | - Naofumi Yoshida
- First Department of Internal Medicine, Kansai Medical University, Hirakata, Japan
| | - Hideki Amuro
- First Department of Internal Medicine, Kansai Medical University, Hirakata, Japan
| | - Tadashi Okano
- Center for Senile Degenerative Disorders (CSDD), Osaka Metropolitan University Graduate School of Medicine, Osaka, Japan
| | - Yo Ueda
- Department of Rheumatology and Clinical Immunology, Kobe University Graduate School of Medicine, Kobe, Japan
| | - Takaichi Okano
- Department of Clinical Laboratory, Kobe University Hospital, Kobe, Japan
| | - Ryota Hara
- Department of Orthopaedic Surgery, Nara Medical University, Kashihara, Japan
| | - Motomu Hashimoto
- Department of Clinical Immunology, Osaka Metropolitan University, Osaka, Japan
| | - Akio Morinobu
- Department of Rheumatology and Clinical Immunology, Kyoto University, Kyoto, Japan
| | - Shuichi Matsuda
- Department of Orthopaedic Surgery, Graduate School of Medicine, Kyoto University, Kyoto, Japan
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Zhao W, Li X, Gao L, Ai Z, Lu Y, Li J, Wang D, Li X, Song N, Huang X, Tong ZH. Machine learning-based model for predicting all-cause mortality in severe pneumonia. BMJ Open Respir Res 2025; 12:e001983. [PMID: 40122535 PMCID: PMC11934410 DOI: 10.1136/bmjresp-2023-001983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 10/15/2024] [Indexed: 03/25/2025] Open
Abstract
BACKGROUND Severe pneumonia has a poor prognosis and high mortality. Current severity scores such as Acute Physiology and Chronic Health Evaluation (APACHE-II) and Sequential Organ Failure Assessment (SOFA), have limited ability to help clinicians in classification and management decisions. The goal of this study was to analyse the clinical characteristics of severe pneumonia and develop a machine learning-based mortality-prediction model for patients with severe pneumonia. METHODS Consecutive patients with severe pneumonia between 2013 and 2022 admitted to Beijing Chaoyang Hospital affiliated with Capital Medical University were included. In-hospital all-cause mortality was the outcome of this study. We performed a retrospective analysis of the cohort, stratifying patients into survival and non-survival groups, using mainstream machine learning algorithms (light gradient boosting machine, support vector classifier and random forest). We aimed to construct a mortality-prediction model for patients with severe pneumonia based on their accessible clinical and laboratory data. The discriminative ability was evaluated using the area under the receiver operating characteristic curve (AUC). The calibration curve was used to assess the fit goodness of the model, and decision curve analysis was performed to quantify clinical utility. By means of logistic regression, independent risk factors for death in severe pneumonia were figured out to provide an important basis for clinical decision-making. RESULTS A total of 875 patients were included in the development and validation cohorts, with the in-hospital mortality rate of 14.6%. The AUC of the model in the internal validation set was 0.8779 (95% CI, 0.738 to 0.974), showing a competitive discrimination ability that outperformed those of traditional clinical scoring systems, that is, APACHE-II, SOFA, CURB-65 (confusion, urea, respiratory rate, blood pressure, age ≥65 years), Pneumonia Severity Index. The calibration curve showed that the in-hospital mortality in severe pneumonia predicted by the model fit reasonably with the actual hospital mortality. In addition, the decision curve showed that the net clinical benefit was positive in both training and validation sets of hospitalised patients with severe pneumonia. Based on ensemble machine learning algorithms and logistic regression technique, the level of ferritin, lactic acid, blood urea nitrogen, creatine kinase, eosinophil and the requirement of vasopressors were identified as top independent predictors of in-hospital mortality with severe pneumonia. CONCLUSION A robust clinical model for predicting the risk of in-hospital mortality after severe pneumonia was successfully developed using machine learning techniques. The performance of this model demonstrates the effectiveness of these techniques in creating accurate predictive models, and the use of this model has the potential to greatly assist patients and clinical doctors in making well-informed decisions regarding patient care.
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Affiliation(s)
- Weichao Zhao
- Department of Respiratory and Critical Care Medicine, Capital Medical University, Beijing, China
- Department of Respiratory Medicine, the Ninth Medical Center, Chinese PLA General Hospital, Beijing, China
| | - Xuyan Li
- Department of Respiratory and Critical Care Medicine, Capital Medical University, Beijing, China
| | - Lianjun Gao
- Beijing Boai hospital, Department of Respiratory and Critical Care Medicine, Beijing, China
| | - Zhuang Ai
- Sinopharm Genomics Technology Co Ltd, Changzhou, Jiangsu, China
| | - Yaping Lu
- Sinopharm Genomics Technology Co Ltd, Changzhou, Jiangsu, China
| | - Jiachen Li
- Department of Clinical Epidemiology, Capital Medical University, Beijing, China
| | - Dong Wang
- Department of Respiratory and Critical Care Medicine, Capital Medical University, Beijing, China
| | - Xinlou Li
- Department of Medical Research, the Ninth Medical Center, Chinese PLA General Hospital, Beijing, China
| | - Nan Song
- Capital Medical University, Beijing, Beijing, China
| | - Xuan Huang
- Capital Medical University, Beijing, Beijing, China
| | - Zhao-Hui Tong
- Department of Respiratory and Critical Care Medicine, Capital Medical University, Beijing, China
- Capital Medical University, Beijing, Beijing, China
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Vickery S, Junker F, Döding R, Belavy DL, Angelova M, Karmakar C, Becker L, Taheri N, Pumberger M, Reitmaier S, Schmidt H. Integrating multidimensional data analytics for precision diagnosis of chronic low back pain. Sci Rep 2025; 15:9675. [PMID: 40113848 PMCID: PMC11926347 DOI: 10.1038/s41598-025-93106-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2024] [Accepted: 03/03/2025] [Indexed: 03/22/2025] Open
Abstract
Low back pain (LBP) is a leading cause of disability worldwide, with up to 25% of cases become chronic (cLBP). Whilst multi-factorial, the relative importance of contributors to cLBP remains unclear. We leveraged a comprehensive multi-dimensional data-set and machine learning-based variable importance selection to identify the most effective modalities for differentiating whether a person has cLBP. The dataset included questionnaire data, clinical and functional assessments, and spino-pelvic magnetic resonance imaging (MRI), encompassing a total of 144 parameters from 1,161 adults with (n = 512) and without cLBP (n = 649). Boruta and random forest were utilised for variable importance selection and cLBP classification respectively. A multimodal model including questionnaire, clinical, and MRI data was the most effective in differentiating people with and without cLBP. From this, the most robust variables (n = 9) were psychosocial factors, neck and hip mobility, as well as lower lumbar disc herniation and degeneration. This finding persisted in an unseen holdout dataset. Beyond demonstrating the importance of a multi-dimensional approach to cLBP, our findings will guide the development of targeted diagnostics and personalized treatment strategies for cLBP patients.
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Affiliation(s)
- Sam Vickery
- Fachbereich Pflege-, Hebammen- und Therapiewissenschaften (PHT), Hochschule Bochum (University of Applied Sciences), Bochum, Germany
| | - Frederick Junker
- Fachbereich Pflege-, Hebammen- und Therapiewissenschaften (PHT), Hochschule Bochum (University of Applied Sciences), Bochum, Germany
| | - Rebekka Döding
- Fachbereich Pflege-, Hebammen- und Therapiewissenschaften (PHT), Hochschule Bochum (University of Applied Sciences), Bochum, Germany
| | - Daniel L Belavy
- Fachbereich Pflege-, Hebammen- und Therapiewissenschaften (PHT), Hochschule Bochum (University of Applied Sciences), Bochum, Germany
| | - Maia Angelova
- Aston Digital Futures Institute, Aston University, Birmingham, UK
- School of Information Technology, Deakin University, Geelong, Australia
| | - Chandan Karmakar
- School of Information Technology, Deakin University, Geelong, Australia
| | - Luis Becker
- Center for Musculoskeletal Surgery, Charité - Universitätsmedizin Berlin, Berlin, Germany
- Julius Wolff Institut, Berlin Institute of Health - Charité at Universitätsmedizin Berlin, Berlin, Germany
| | - Nima Taheri
- Center for Musculoskeletal Surgery, Charité - Universitätsmedizin Berlin, Berlin, Germany
- Julius Wolff Institut, Berlin Institute of Health - Charité at Universitätsmedizin Berlin, Berlin, Germany
| | - Matthias Pumberger
- Center for Musculoskeletal Surgery, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Sandra Reitmaier
- Julius Wolff Institut, Berlin Institute of Health - Charité at Universitätsmedizin Berlin, Berlin, Germany
| | - Hendrik Schmidt
- Julius Wolff Institut, Berlin Institute of Health - Charité at Universitätsmedizin Berlin, Berlin, Germany.
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Lu Z, Dong B, Cai H, Tian T, Wang J, Fu L, Wang B, Zhang W, Lin S, Tuo X, Wang J, Yang T, Huang X, Zheng Z, Xue H, Xu S, Liu S, Sun P, Zou H. Identifying Data-Driven Clinical Subgroups for Cervical Cancer Prevention With Machine Learning: Population-Based, External, and Diagnostic Validation Study. JMIR Public Health Surveill 2025; 11:e67840. [PMID: 40106366 PMCID: PMC11939026 DOI: 10.2196/67840] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2024] [Revised: 01/29/2025] [Accepted: 01/29/2025] [Indexed: 03/22/2025] Open
Abstract
Background Cervical cancer remains a major global health issue. Personalized, data-driven cervical cancer prevention (CCP) strategies tailored to phenotypic profiles may improve prevention and reduce disease burden. Objective This study aimed to identify subgroups with differential cervical precancer or cancer risks using machine learning, validate subgroup predictions across datasets, and propose a computational phenomapping strategy to enhance global CCP efforts. Methods We explored the data-driven CCP subgroups by applying unsupervised machine learning to a deeply phenotyped, population-based discovery cohort. We extracted CCP-specific risks of cervical intraepithelial neoplasia (CIN) and cervical cancer through weighted logistic regression analyses providing odds ratio (OR) estimates and 95% CIs. We trained a supervised machine learning model and developed pathways to classify individuals before evaluating its diagnostic validity and usability on an external cohort. Results This study included 551,934 women (median age, 49 years) in the discovery cohort and 47,130 women (median age, 37 years) in the external cohort. Phenotyping identified 5 CCP subgroups, with CCP4 showing the highest carcinoma prevalence. CCP2-4 had significantly higher risks of CIN2+ (CCP2: OR 2.07 [95% CI: 2.03-2.12], CCP3: 3.88 [3.78-3.97], and CCP4: 4.47 [4.33-4.63]) and CIN3+ (CCP2: 2.10 [2.05-2.14], CCP3: 3.92 [3.82-4.02], and CCP4: 4.45 [4.31-4.61]) compared to CCP1 (P<.001), consistent with the direction of results observed in the external cohort. The proposed triple strategy was validated as clinically relevant, prioritizing high-risk subgroups (CCP3-4) for colposcopies and scaling human papillomavirus screening for CCP1-2. Conclusions This study underscores the potential of leveraging machine learning algorithms and large-scale routine electronic health records to enhance CCP strategies. By identifying key determinants of CIN2+/CIN3+ risk and classifying 5 distinct subgroups, our study provides a robust, data-driven foundation for the proposed triple strategy. This approach prioritizes tailored prevention efforts for subgroups with varying risks, offering a novel and scalable tool to complement existing cervical cancer screening guidelines. Future work should focus on independent external and prospective validation to maximize the global impact of this strategy.
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Affiliation(s)
- Zhen Lu
- School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, China
| | - Binhua Dong
- Department of Gynecology, Laboratory of Gynecologic Oncology, Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, China
- Fujian Key Laboratory of Women and Children’s Critical Diseases Research, Fuzhou, China
| | - Hongning Cai
- Department of Gynecology, Maternal and Child Health Hospital of Hubei Province (Women and Children's Hospital of Hubei Province) Wuhan, Wuhan, China
| | - Tian Tian
- School of Public Health, Xinjiang Medical University, Urumqi, China
| | - Junfeng Wang
- Division of Pharmacoepidemiology and Clinical Pharmacology, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, Netherlands
| | - Leiwen Fu
- Beijing Chest Hospital, Capital Medical University, Beijing Tuberculosis and Thoracic Tumor Research Institute, Beijing, China
| | - Bingyi Wang
- Institute for HIV/AIDS Control and Prevention, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
- Department of HIV/AIDS Control and Prevention, Guangdong Provincial Academy of Preventive Medicine, Guangzhou, China
| | - Weijie Zhang
- School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, China
| | - Shaomei Lin
- Department of Gynecology, Shunde Women's and Children's Hospital of Guangdong Medical University, Foshan, China
| | - Xunyuan Tuo
- Department of Gynecology, Gansu Provincial Maternity and Child-care Hospital, Lanzhou, China
| | - Juntao Wang
- Department of Gynecology, Guiyang Maternal and Child Health Care Hospital, Guiyang, China
| | - Tianjie Yang
- Department of Gynecology, Shenzhen Maternity & Child Healthcare Hospital, Shenzhen, China
| | - Xinxin Huang
- The Ministry of Health, Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, China
| | - Zheng Zheng
- Department of Gynecology, Shenzhen Maternity & Child Healthcare Hospital, Shenzhen, China
| | - Huifeng Xue
- Center for Cervical Disease Diagnosis and Treatment, Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, China
| | - Shuxia Xu
- Department of Pathology, Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, China
| | - Siyang Liu
- School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, China
| | - Pengming Sun
- Department of Gynecology, Laboratory of Gynecologic Oncology, Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, China
- Fujian Key Laboratory of Women and Children’s Critical Diseases Research, Fuzhou, China
- School of Group Medicine and Public Health, Peking Union Medical College, Beijing, China
| | - Huachun Zou
- School of Public Health, Fudan University, Shanghai, China
- Shenzhen Campus, Sun Yat-sen University, Shenzhen, China
- Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics and Gynecology and Pediatrics, Fujian Medical University, Fuzhou, China
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Bonnett LJ, Spain T, Hunt A, Hutton JL, Watson V, Marson AG, Blakey J. Guide to evaluating performance of prediction models for recurrent clinical events. Diagn Progn Res 2025; 9:6. [PMID: 40098007 PMCID: PMC11912649 DOI: 10.1186/s41512-025-00187-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/28/2024] [Accepted: 03/05/2025] [Indexed: 03/19/2025] Open
Abstract
BACKGROUND Many chronic conditions, such as epilepsy and asthma, are typified by recurrent events-repeated acute deterioration events of a similar type. Statistical models for these conditions often focus on evaluating the time to the first event. They therefore do not make use of data available on all events. Statistical models for recurrent events exist, but it is not clear how best to evaluate their performance. We compare the relative performance of statistical models for analysing recurrent events for epilepsy and asthma. METHODS We studied two clinical exemplars of common and infrequent events: asthma exacerbations using the Optimum Patient Clinical Research Database, and epileptic seizures using data from the Standard versus New Antiepileptic Drug Study. In both cases, count-based models (negative binomial and zero-inflated negative binomial) and variants on the Cox model (Andersen-Gill and Prentice, Williams and Peterson) were used to assess the risk of recurrence (of exacerbations or seizures respectively). Performance of models was evaluated via numerical (root mean square prediction error, mean absolute prediction error, and prediction bias) and graphical (calibration plots and Bland-Altman plots) approaches. RESULTS The performance of the prediction models for asthma and epilepsy recurrent events could be evaluated via the selected numerical and graphical measures. For both the asthma and epilepsy exemplars, the Prentice, Williams and Peterson model showed the closest agreement between predicted and observed outcomes. CONCLUSION Inappropriate models can lead to incorrect conclusions which disadvantage patients. Therefore, prediction models for outcomes associated with chronic conditions should include all repeated events. Such models can be evaluated via the promoted numerical and graphical approaches alongside modified calibration measures.
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Affiliation(s)
- Laura J Bonnett
- Department of Health Data Science, University of Liverpool, Liverpool, L69 3GL, UK.
| | - Thomas Spain
- Department of Health Data Science, University of Liverpool, Liverpool, L69 3GL, UK
| | - Alexandra Hunt
- Department of Health Data Science, University of Liverpool, Liverpool, L69 3GL, UK
| | - Jane L Hutton
- Department of Statistics, University of Warwick, Coventry, CV4 7AL, UK
| | - Victoria Watson
- Department of Health Data Science, University of Liverpool, Liverpool, L69 3GL, UK
- , Phastar, London, W4 5LE, UK
| | - Anthony G Marson
- Department of Pharmacology & Therapeutics, University of Liverpool, Liverpool, L69 7BE, UK
| | - John Blakey
- Medical School, Curtin University, Perth, WA, 6102, Australia
- Respiratory Medicine, Sir Charles Gairdner Hospital, Perth, WA, 6009, Australia
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Wang YC, He Q, Wu YJ, Zhang L, Wu S, Fang XJ, Jia SS, Luo FG. Construction and validation of a machine learning-based nomogram model for predicting pneumonia risk in patients with catatonia: a retrospective observational study. Front Psychiatry 2025; 16:1557659. [PMID: 40160203 PMCID: PMC11951867 DOI: 10.3389/fpsyt.2025.1557659] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/08/2025] [Accepted: 02/20/2025] [Indexed: 04/02/2025] Open
Abstract
Objective Catatonia was often complicated by pneumonia, and the development of severe pneumonia after admission posed significant challenges to its treatment. This study aimed to develop a Nomogram Model based on pre-admission characteristics of patients with catatonia to predict the risk of pneumonia after admission. Methods This retrospective observational study reviewed catatonia patients hospitalized at Hangzhou Seventh People's Hospital from September 2019 to November 2024. Data included demographic characteristics, medical history, maintenance medications, and pre-admission clinical presentations. Patients were divided into catatonia with and without pneumonia groups. The LASSO Algorithm was used for feature selection, and seven machine learning models: Decision Tree(DT), Logistic Regression(LR), Naive Bayes(NB), Random Forest(RF), K Nearest Neighbors(KNN), Gradient Boosting Machine(GBM), Support Vector Machine(SVM) were trained. Model performance was evaluated using AUC, Accuracy, Sensitivity, Specificity, Positive Predictive Value, Negative Predictive Value, F1 Score, Cohen's Kappa, and Brier Score, and Brier score. The best-performing model was selected for multivariable analysis to determine the variables included in the final Nomogram Model. The Nomogram Model was further validated through ROC Curves, Calibration Curves, Decision Curve Analysis (DCA), and Bootstrapping to ensure discrimination, calibration, and clinical applicability. Results Among 156 patients, 79 had no pneumonia, and 77 had pneumonia. LASSO Algorithm identified 15 non-zero coefficient variables (LASSO 1-SEλ=0.076). The GBM showed the best performance (AUC = 0.954, 95% CI: 0.924-0.983, vs other models by DeLong's test: P < 0.05). Five key variables: Age, Clozapine, Diaphoresis, Intake Refusal, and Waxy Flexibility were used to construct the Nomogram Model. Validation showed good discrimination (AUC = 0.803, 95% CI: 0.735-0.870), calibration, and clinical applicability. Internal validation (Bootstrapping, n=500) confirmed model stability (AUC = 0.814, 95% CI: 0.743-0.878; Hosmer-Lemeshow P = 0.525). Conclusion This study developed a Nomogram Model based on five key factors, demonstrating significant clinical value in predicting the risk of pneumonia in hospitalized patients with catatonia.
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Hafdi M, Taylor-Rowan M, Drozdowska B, Elliott E, McGuire L, Richard E, Quinn TJ. Prediction of dementia using CT imaging in stroke (PRODUCTS). Eur Stroke J 2025:23969873251325076. [PMID: 40079226 PMCID: PMC11907507 DOI: 10.1177/23969873251325076] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2024] [Accepted: 02/12/2025] [Indexed: 03/14/2025] Open
Abstract
INTRODUCTION A better understanding of who will develop dementia can inform patient care. Although MRI offers prognostic insights, access is limited globally, whereas CT-imaging is readily available in acute stroke. We explored the prognostic utility of acute CT-imaging for predicting dementia. PATIENTS AND METHODS We included stroke or transient ischaemic attack (TIA) survivors from participating stroke centres in Scotland. Acute CT-scans were rated using ordinal scales for neurodegenerative and cerebrovascular changes (old infarcts, white matter lesions (WMLs), medial temporal lobe atrophy (MTA), and global atrophy (GA)) and combined together to a 'brain-frailty' score. Dementia status was established at 18-months following stroke or TIA. RESULTS Among 195 participants, 33% had dementia after 3 years of follow-up. High brain-frailty score (⩾2/4) correlated with higher risk of dementia (HR (95% CI) 6.02 (1.89-19.21)). As individual predictor, severe MTA was most strongly associated with dementia (adjusted HR (95% CI) 2.09 (1.07-4.08)). Other predictors associated with dementia included older age, higher prestroke morbidity (mRS), WMLs, and GA. Integrated in a prediction model with clinical parameters, prestroke mRS, cardiovascular disease, GA, MTA and Abbreviated-Mental-Test were the strongest predictors of dementia (c-statistic: 0.77). DISCUSSION AND CONCLUSION Increased brain-frailty, and its individual components (WMLs, MTA, and GA) are associated with a higher risk of dementia in participants with stroke. Combining clinical and brain-frailty parameters created a moderate dementia prediction model but added little value over clinical parameters in combination with cognitive testing. CT-based brain-frailty may provide better prognostic insights when cognitive testing isn't feasible and for identifying highest-risk individuals for dementia prevention trials to increase trial efficiency.
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Affiliation(s)
- Melanie Hafdi
- Department of Neurology, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands
| | | | - Bogna Drozdowska
- Cumming School of Medicine, University of Calgary, Calgary, Canada
| | - Emma Elliott
- National Institute for Health and Care Research (NIHR) Applied Research Collaboration Greater Manchester, School of Health Sciences, The University of Manchester, Manchester, UK
| | - Lucy McGuire
- Institute of Cardiovascular and Metabolic Sciences, University of Glasgow, Glasgow, UK
| | - Edo Richard
- Department of Neurology, Donders Institute for Brain, Behaviour and Cognition, Radboud University Medical Centre, Nijmegen, The Netherlands
- Department of Public & Occupational Health, University of Amsterdam, Amsterdam, The Netherlands
| | - Terence J Quinn
- Institute of Cardiovascular and Metabolic Sciences, University of Glasgow, Glasgow, UK
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Wang S, Zhang R, Guo P, Yang H, Liu Y, Zhu H. Association of prebiotic/probiotic intake with MASLD: evidence from NHANES and randomized controlled trials in the context of prediction, prevention, and a personalized medicine framework. EPMA J 2025; 16:183-197. [PMID: 39991098 PMCID: PMC11842653 DOI: 10.1007/s13167-025-00398-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2024] [Accepted: 01/13/2025] [Indexed: 02/25/2025]
Abstract
Objective Metabolic-associated fatty liver disease (MASLD) is a growing global health concern. From the standpoint of preventive and personalized medicine, understanding the early determinants and modifiable risk factors is essential for targeted prevention and personalized treatment strategies. This study aimed to evaluate the specific association between probiotics/prebiotics and the occurrence of MASLD, contributing to the development of innovative preventive measures and personalized therapeutic approaches. Methods Data were obtained from the National Health and Nutrition Examination Survey (NHANES) from 2001 to 2018. The study employed logistic regression analysis to examine the relation between MASLD and probiotics/prebiotics. The efficacy of various MASLD predictive models was assessed using receiver operating characteristic (ROC) curves. A meta-analysis was conducted by searching databases up to 4 May 2024. The analysis included randomized controlled trials of liver function in patients with MASLD or nonalcoholic steatohepatitis treated with probiotics, prebiotics, or yogurt for a minimum of 6 months. Results A total of 5014 adults from NHANES were included in this study, with a weighted prevalence of MASLD observed at 24.47%. MASLD adults who consumed both probiotics and prebiotics exhibited a reduced risk of MASLD (OR = 0.71, 95% CI: 0.53 to 0.94). The use of probiotics/prebiotics can enhance the simplicity and practicality of the model. Model 1, adjusted for sex, BMI, race, and HEI-2015, achieved an area under the curve (AUC) of 0.8544, while Model 2, adjusted for sex, BMI, race, and prebiotics/probiotics use, showed a similar AUC of 0.8537. The comparison between the two models revealed no statistically significant difference (0.8544 vs. 0.8537; 95% CI: - 0.0010 to 0.0025; Z = 0.8332; p = 0.4047). Subgroup analysis of the NHANES data revealed that individuals aged 40 and older benefit from consuming probiotics or prebiotics. Furthermore, the meta-analysis demonstrated that probiotic or prebiotic interventions resulted in significant improvements in biochemical markers, including alanine aminotransferase, aspartate aminotransferase, low-density lipoprotein cholesterol, and triglycerides. Conclusions The consumption of probiotics/prebiotics has been linked to a reduced risk of developing MASLD in adults. Integrating probiotics/prebiotics into early intervention and personalized treatment plans may facilitate targeted prevention and management of MASLD, promoting a more individualized approach to disease prevention and care. Supplementary information The online version contains supplementary material available at 10.1007/s13167-025-00398-4.
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Affiliation(s)
- Senlin Wang
- The Center of Obesity and Metabolic Diseases, Department of General Surgery, Affiliated Hospital of Southwest Jiaotong University, The Third People’s Hospital of Chengdu, No. 19 Yangshi Road, Chengdu, Sichuan 610031 China
- College of Medicine, Southwest Jiaotong University, Chengdu, China
- The Center of Obesity and Metabolic Diseases, Department of General Surgery, The Third People’s Hospital of Chengdu, College of Medicine, The Affiliated Hospital of Southwest Jiaotong University, Chengdu, Sichuan China
| | - Ruimin Zhang
- College of Medicine, Southwest Jiaotong University, Chengdu, China
| | - Peisen Guo
- The Center of Obesity and Metabolic Diseases, Department of General Surgery, Affiliated Hospital of Southwest Jiaotong University, The Third People’s Hospital of Chengdu, No. 19 Yangshi Road, Chengdu, Sichuan 610031 China
| | - Huawu Yang
- The Center of Obesity and Metabolic Diseases, Department of General Surgery, Affiliated Hospital of Southwest Jiaotong University, The Third People’s Hospital of Chengdu, No. 19 Yangshi Road, Chengdu, Sichuan 610031 China
- College of Medicine, Southwest Jiaotong University, Chengdu, China
| | - Yanjun Liu
- The Center of Obesity and Metabolic Diseases, Department of General Surgery, Affiliated Hospital of Southwest Jiaotong University, The Third People’s Hospital of Chengdu, No. 19 Yangshi Road, Chengdu, Sichuan 610031 China
- College of Medicine, Southwest Jiaotong University, Chengdu, China
- The Center of Obesity and Metabolic Diseases, Department of General Surgery, The Third People’s Hospital of Chengdu, College of Medicine, The Affiliated Hospital of Southwest Jiaotong University, Chengdu, Sichuan China
| | - Hongmei Zhu
- The Center of Obesity and Metabolic Diseases, Department of General Surgery, Affiliated Hospital of Southwest Jiaotong University, The Third People’s Hospital of Chengdu, No. 19 Yangshi Road, Chengdu, Sichuan 610031 China
- Medical Research Center, The Third People’s Hospital of Chengdu, Chengdu, China
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Willem T, Shitov VA, Luecken MD, Kilbertus N, Bauer S, Piraud M, Buyx A, Theis FJ. Biases in machine-learning models of human single-cell data. Nat Cell Biol 2025; 27:384-392. [PMID: 39972066 DOI: 10.1038/s41556-025-01619-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 01/09/2025] [Indexed: 02/21/2025]
Abstract
Recent machine-learning (ML)-based advances in single-cell data science have enabled the stratification of human tissue donors at single-cell resolution, promising to provide valuable diagnostic and prognostic insights. However, such insights are susceptible to biases. Here we discuss various biases that emerge along the pipeline of ML-based single-cell analysis, ranging from societal biases affecting whose samples are collected, to clinical and cohort biases that influence the generalizability of single-cell datasets, biases stemming from single-cell sequencing, ML biases specific to (weakly supervised or unsupervised) ML models trained on human single-cell samples and biases during the interpretation of results from ML models. We end by providing methods for single-cell data scientists to assess and mitigate biases, and call for efforts to address the root causes of biases.
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Affiliation(s)
- Theresa Willem
- TUM School for Medicine and Health, Institute of History and Ethics in Medicine, Technical University of Munich, Munich, Germany.
- Helmholtz Munich, Munich, Germany.
| | - Vladimir A Shitov
- Department of Computational Health, Institute of Computational Biology, Helmholtz Munich, Munich, Germany
- Comprehensive Pneumology Center (CPC) with the CPC-M bioArchive and Institute of Lung Health and Immunity (LHI), Helmholtz Munich; Member of the German Center for Lung Research (DZL), Munich, Germany
| | - Malte D Luecken
- Department of Computational Health, Institute of Computational Biology, Helmholtz Munich, Munich, Germany
- Comprehensive Pneumology Center (CPC) with the CPC-M bioArchive and Institute of Lung Health and Immunity (LHI), Helmholtz Munich; Member of the German Center for Lung Research (DZL), Munich, Germany
| | - Niki Kilbertus
- Helmholtz Munich, Munich, Germany
- School for Computation, Information and Technology, Technical University of Munich, Munich, Germany
- Munich Center for Machine Learning (MCML), Munich, Germany
| | - Stefan Bauer
- Helmholtz Munich, Munich, Germany
- School for Computation, Information and Technology, Technical University of Munich, Munich, Germany
- Munich Center for Machine Learning (MCML), Munich, Germany
| | | | - Alena Buyx
- TUM School for Medicine and Health, Institute of History and Ethics in Medicine, Technical University of Munich, Munich, Germany
| | - Fabian J Theis
- Helmholtz Munich, Munich, Germany.
- School for Computation, Information and Technology, Technical University of Munich, Munich, Germany.
- School of Life Sciences, Technical University of Munich, Munich, Germany.
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Tang R, Guan B, Xie J, Xu Y, Yan S, Wang J, Li Y, Ren L, Wan H, Peng T, Zeng L. Prediction model of malnutrition in hospitalized patients with acute stroke. Top Stroke Rehabil 2025; 32:173-187. [PMID: 39024192 DOI: 10.1080/10749357.2024.2377521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Accepted: 06/30/2024] [Indexed: 07/20/2024]
Abstract
OBJECTIVE The prognosis of stroke patients is greatly threatened by malnutrition. However, there is no model to predict the risk of malnutrition in hospitalized stroke patients. This study developed a predictive model for identifying high-risk malnutrition in stroke patients. METHODS Stroke patients from two tertiary hospitals were selected as the objects. Binary logistic regression was used to build the model. The model's performance was evaluated using various metrics including the receiver operating characteristic curve, Hosmer-Lemeshow test, sensitivity, specificity, Youden index, clinical decision curve, and risk stratification. RESULTS A total of 319 stroke patients were included in the study. Among them, 27% experienced malnutrition while in the hospital. The prediction model included all independent variables, including dysphagia, pneumonia, enteral nutrition, Barthel Index, upper arm circumference, and calf circumference (all p < 0.05). The AUC area in the modeling group was 0.885, while in the verification group, it was 0.797. The prediction model produces greater net clinical benefit when the risk threshold probability is between 0% and 80%, as revealed by the clinical decision curve. All p values of the Hosmer test were > 0.05. The optimal cutoff value for the model was 0.269, with a sensitivity of 0.849 and a specificity of 0.804. After risk stratification, the MRS scores and malnutrition incidences increased significantly with escalating risk levels (p < 0.05) in both modeling and validation groups. CONCLUSIONS This study developed a prediction model for malnutrition in stroke patients. It has been proven that the model has good differentiation and calibration.
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Affiliation(s)
- Rong Tang
- Department of Nursing, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Bi Guan
- Department of Nursing, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Jiaoe Xie
- Department of Neurology, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Ying Xu
- School of Nursing, Southwest Medical University, Luzhou, Sichuan, China
| | - Shu Yan
- Medical Affairs Department, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Jianghong Wang
- Department of Neurology, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Yan Li
- Department of Nursing, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Liling Ren
- Department of Neurology, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Haiyan Wan
- Department of Endocrinology, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Tangming Peng
- Department of Neurology, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
| | - Liangnan Zeng
- Department of Nursing, Chengdu Fifth People's Hospital, Chengdu, Sichuan, China
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Luo Q, Zhang Q, Liu H, Chen X, Yang S, Xu Q. Time-dependent interpretable survival prediction model for second primary NSCLC patients. Int J Med Inform 2025; 195:105771. [PMID: 39721115 DOI: 10.1016/j.ijmedinf.2024.105771] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2024] [Revised: 11/23/2024] [Accepted: 12/19/2024] [Indexed: 12/28/2024]
Abstract
OBJECTIVE Accurate predictive models for second primary non-small cell lung cancer (SP-NSCLC) are limited. This study aimed to develop and validate overall survival (OS) prediction models for SP-NSCLC patients using time-dependent interpretable survival machine learning algorithms. METHODS This study utilized data from the Surveillance, Epidemiology, and End Results (SEER) database, encompassing 8 and 12 registries, to extract data on patients aged 20-89 diagnosed with SP-NSCLC between 1988 and 2020. The dataset was divided into development, external temporal and spatial validation cohorts. Predictors included demographic, clinical, pathological and initial primary cancer-related features. Multiple survival machine learning algorithms were developed and validated, assessing model performance using C-index, time-dependent area under the receiver operating characteristic curve (time-AUC), and time-dependent Brier Score. The time-dependent interpretability analysis was employed to explore the time-dependent feature importance of key predictors. RESULTS The Blackboost model demonstrated excellent performance (C-index: 0.7517, and time-AUC: 0.8438), and good calibration (time-Brier Score of 0.0754). External validations and subgroup analyses demonstrated the robustness, generalizability, and fairness. Utilizing the optimal cutoff threshold, high-risk groups could be effectively identified. Surgery was the most critical predictor across the entire survival period. Combined stage (distant) and chemotherapy were the second most important predictors within 0 to 5 years, while age replaced from 5 to 20 years. Additionally, we developed an online visualization tool. CONCLUSIONS The Blackboost survival model achieved accurate, fair, and robust survival prediction for SP-NSCLC patients. Surgery, combined stage (distant), chemotherapy, and age contributed differently across various survival periods. The online visualization tool facilitated personalized survival predictions.
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Affiliation(s)
- Qiong Luo
- Department of Oncology Medicine, Fujian Medical University Union Hospital, Fuzhou, 350001, PR China
| | - Qianyuan Zhang
- Department of General Medicine, Fujian Medical University Union Hospital, Fuzhou, 350001, PR China
| | - Haiyu Liu
- Department of Pulmonary and Critical Care Medicine, Fujian Medical University Union Hospital, Fuzhou 350001, PR China
| | - Xiangqi Chen
- Department of Pulmonary and Critical Care Medicine, Fujian Medical University Union Hospital, Fuzhou 350001, PR China.
| | - Sheng Yang
- Department of Oncology Medicine, Fujian Medical University Union Hospital, Fuzhou, 350001, PR China.
| | - Qian Xu
- Department of Oncology Medicine, Fujian Medical University Union Hospital, Fuzhou, 350001, PR China.
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Cui XW, Goudie A, Blaivas M, Chai YJ, Chammas MC, Dong Y, Stewart J, Jiang TA, Liang P, Sehgal CM, Wu XL, Hsieh PCC, Adrian S, Dietrich CF. WFUMB Commentary Paper on Artificial intelligence in Medical Ultrasound Imaging. ULTRASOUND IN MEDICINE & BIOLOGY 2025; 51:428-438. [PMID: 39672681 DOI: 10.1016/j.ultrasmedbio.2024.10.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2024] [Revised: 10/24/2024] [Accepted: 10/31/2024] [Indexed: 12/15/2024]
Abstract
Artificial intelligence (AI) is defined as the theory and development of computer systems able to perform tasks normally associated with human intelligence. At present, AI has been widely used in a variety of ultrasound tasks, including in point-of-care ultrasound, echocardiography, and various diseases of different organs. However, the characteristics of ultrasound, compared to other imaging modalities, such as computed tomography (CT) and magnetic resonance imaging (MRI), poses significant additional challenges to AI. Application of AI can not only reduce variability during ultrasound image acquisition, but can standardize these interpretations and identify patterns that escape the human eye and brain. These advances have enabled greater innovations in ultrasound AI applications that can be applied to a variety of clinical settings and disease states. Therefore, The World Federation of Ultrasound in Medicine and Biology (WFUMB) is addressing the topic with a brief and practical overview of current and potential future AI applications in medical ultrasound, as well as discuss some current limitations and future challenges to AI implementation.
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Affiliation(s)
- Xin Wu Cui
- Department of Medical Ultrasound, Tongji Hospital, Tongji Medical College and State Key Laboratory for Diagnosis and Treatment of Severe Zoonotic Infectious Diseases, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Adrian Goudie
- Department of Emergency, Fiona Stanley Hospital, Perth, Australia
| | - Michael Blaivas
- Department of Medicine, University of South Carolina School of Medicine, Columbia, SC, USA
| | - Young Jun Chai
- Department of Surgery, Seoul National University College of Medicine, Seoul Metropolitan Government Seoul National University Boramae Medical Center, Seoul, Republic of Korea
| | - Maria Cristina Chammas
- Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil
| | - Yi Dong
- Department of Ultrasound, Xinhua Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - Jonathon Stewart
- School of Medicine, The University of Western Australia, Perth, Western Australia, Australia
| | - Tian-An Jiang
- Department of Ultrasound Medicine, The First Affiliated Hospital of Zhejiang University School of Medicine, Hangzhou, Zhejiang, China
| | - Ping Liang
- Department of Interventional Ultrasound, Chinese PLA General Hospital, Beijing, China
| | - Chandra M Sehgal
- Ultrasound Research Lab, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Xing-Long Wu
- School of Computer Science & Engineering, Wuhan Institute of Technology, Wuhan, Hubei, China
| | | | - Saftoiu Adrian
- Research Center of Gastroenterology and Hepatology, University of Medicine and Pharmacy of Craiova, Craiova, Romania
| | - Christoph F Dietrich
- Department General Internal Medicine (DAIM), Hospitals Hirslanden Bern Beau Site, Salem and Permanence, Bern, Switzerland.
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Téllez L, Rincón D, Payancé A, Jaillais A, Lebray P, Rodríguez de Santiago E, Clemente A, Paradis V, Lefort B, Garrido-Lestache E, Prieto R, Iserin L, Tallegas M, Garrido E, Torres M, Muriel A, Perna C, Del Cerro MJ, d'Alteroche L, Rautou PE, Bañares R, Albillos A. Non-invasive assessment of severe liver fibrosis in patients with Fontan-associated liver disease: The VALDIG-EASL FONLIVER cohort. J Hepatol 2025; 82:480-489. [PMID: 39260705 DOI: 10.1016/j.jhep.2024.09.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/21/2024] [Revised: 08/06/2024] [Accepted: 09/02/2024] [Indexed: 09/13/2024]
Abstract
BACKGROUND & AIMS Fontan-type surgery is a palliative procedure for congenital heart disease with univentricular physiology that may, in the long term, lead to advanced chronic liver disease. Herein, we assessed the accuracy of conventional non-invasive models for assessing liver fibrosis in the context of Fontan circulation and developed a new risk score employing non-invasive tools. METHODS A prospective, cross-sectional, observational study was conducted across five European centers and encompassing all consecutive adult patients with Fontan circulation, liver biopsy and non-invasive tests (e.g. elastography, APRI, and FIB-4). The primary outcome was the identification of severe liver fibrosis on biopsy. Multivariable logistic regression identified non-invasive predictors of severe fibrosis, leading to the development and internal validation of a new scoring model named the FonLiver risk score. RESULTS In total, 217 patients (mean [SD] age, 27.9 [8.9] years; 50.7% males) were included. Severe liver fibrosis was present in 47.9% (95% CI 41.2%-54.5%) and correlated with a lower functional class, protein-losing enteropathy, and compromised cardiopulmonary and systemic hemodynamics. The final FonLiver risk score incorporated liver stiffness measurement using transient elastography and platelet count, and demonstrated strong discrimination and calibration (AUROC of 0.81). The FonLiver risk score outperformed conventional prediction models (e.g. APRI and FIB-4), which all exhibited worse performance in our cohort (AUROC <0.70 for all). CONCLUSION Severe liver fibrosis is prevalent in adults following Fontan-type surgery and can be effectively estimated using the novel FonLiver risk score. This scoring system can be easily incorporated into the routine assessment of patients with Fontan circulation. IMPACT AND IMPLICATIONS Fontan-type surgery is used as a palliative procedure for congenital heart disease with univentricular physiology that may, in the long term, lead to advanced chronic liver disease. The severity of liver fibrosis progression has been proposed as a surrogate for failing Fontan hemodynamics as well as worse outcomes after heart transplantation. The development of FALD screening protocols would facilitate the early detection of advanced fibrosis and anticipate interventions to optimize the Fontan circulation, thereby improving outcomes. In our international series, we have developed the FonLiver risk score to predict severe fibrosis, that can be easily incorporated into the routine assessment of patients with Fontan circulation.
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Affiliation(s)
- Luis Téllez
- Gastroenterology and Hepatology Department, Hospital Universitario Ramón y Cajal, IRYCIS, CIBERehd, Universidad de Alcalá, Madrid, Spain
| | - Diego Rincón
- Liver Unit, Hospital General Universitario Gregorio Marañón, Instituto de Investigación Sanitaria Gregorio Marañón, CIBERehd, Universidad Complutense, Madrid, Spain
| | - Audrey Payancé
- AP-HP, Hôpital Beaujon, Service d'Hépatologie, DMU DIGEST, Centre de Référence des Maladies Vasculaires du Foie, FILFOIE, ERN RARE-LIVER, Clichy, France.Gastroenterology Department, CHRU de Tours, Tours, France; Université Paris-Cité, Inserm, Centre de recherche sur l'inflammation, UMR 1149, Paris, France
| | - Anaïs Jaillais
- Service d'Hépato-gastroentérologie, Centre de référence constitutifs des maladies vasculaires du foie, ERN RARE LIVER, CHU de Tours, France Hepatology Unit, UPMC, Pitié Salpetriere Hospital, Paris, France
| | - Pascal Lebray
- Sorbonne Université, Service d'Hépatologie, Hôpitaux Universitaires Pitié Salpêtrière - Charles Foix, AP-HP, Paris, France
| | - Enrique Rodríguez de Santiago
- Gastroenterology and Hepatology Department, Hospital Universitario Ramón y Cajal, IRYCIS, CIBERehd, Universidad de Alcalá, Madrid, Spain
| | - Ana Clemente
- Liver Unit, Hospital General Universitario Gregorio Marañón, Instituto de Investigación Sanitaria Gregorio Marañón, CIBERehd, Universidad Complutense, Madrid, Spain
| | - Valerie Paradis
- Service de Phathologie, Hôpital Beaujon, AP-HP, Clichy, France
| | - Bruno Lefort
- Institut des Cardiopathies Congénitales de Tours, CHU de Tours, et INSERM UMR1069 N2C, Tours, France
| | - Elvira Garrido-Lestache
- Pediatric Cardiology Department and ACHD, Hospital Universitario Ramón y Cajal, IRYCIS, Universidad de Alcalá, Madrid, Spain
| | - Raquel Prieto
- Cardiology Unit, Hospital General Universitario Gregorio Marañón, Instituto de Investigación Sanitaria Gregorio Marañón, CIBERCV, Universidad Complutense, Madrid, Spain
| | - Laurence Iserin
- Adult Congenital Heart Disease Unit, Cardiology departement, European George Pompidou Hospital, APHP, France
| | | | - Elena Garrido
- Gastroenterology and Hepatology Department, Hospital Universitario Ramón y Cajal, IRYCIS, CIBERehd, Universidad de Alcalá, Madrid, Spain
| | - María Torres
- Gastroenterology and Hepatology Department, Hospital Universitario Ramón y Cajal, IRYCIS, CIBERehd, Universidad de Alcalá, Madrid, Spain
| | - Alfonso Muriel
- Unidad de Bioestadística Clínica, Hospital Universitario Ramón y Cajal, IRYCIS), CIBERESP, Universidad de Alcalá, Madrid, Spain
| | - Cristian Perna
- Pathology Department, Hospital Universitario Ramón y Cajal, Universidad de Alcalá, Madrid, Spain
| | - María Jesús Del Cerro
- Pediatric Cardiology Department and ACHD, Hospital Universitario Ramón y Cajal, IRYCIS, Universidad de Alcalá, Madrid, Spain
| | - Louis d'Alteroche
- Service d'Hépato-gastroentérologie, Centre de référence constitutifs des maladies vasculaires du foie, ERN RARE LIVER, CHU de Tours, France Hepatology Unit, UPMC, Pitié Salpetriere Hospital, Paris, France
| | - Pierre-Emmanuel Rautou
- AP-HP, Hôpital Beaujon, Service d'Hépatologie, DMU DIGEST, Centre de Référence des Maladies Vasculaires du Foie, FILFOIE, ERN RARE-LIVER, Clichy, France.Gastroenterology Department, CHRU de Tours, Tours, France; Université Paris-Cité, Inserm, Centre de recherche sur l'inflammation, UMR 1149, Paris, France
| | - Rafael Bañares
- Liver Unit, Hospital General Universitario Gregorio Marañón, Instituto de Investigación Sanitaria Gregorio Marañón, CIBERehd, Universidad Complutense, Madrid, Spain
| | - Agustín Albillos
- Gastroenterology and Hepatology Department, Hospital Universitario Ramón y Cajal, IRYCIS, CIBERehd, Universidad de Alcalá, Madrid, Spain.
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Xia F, Zhou X, Xiong Y, Yin C, Wang M, Li L. Development and internal validation of a nomogram for predicting recurrent respiratory tract infections in children. Respir Med 2025; 238:107961. [PMID: 39855478 DOI: 10.1016/j.rmed.2025.107961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/15/2024] [Revised: 01/21/2025] [Accepted: 01/22/2025] [Indexed: 01/27/2025]
Abstract
OBJECTIVE This study aimed to develop and internally validate a nomogram in predicting the risk of recurrent respiratory tract infection (RRTI) in children. METHODS A retrospective analysis was performed, involving 150 children with RRTI and 151 healthy controls, aged 0-14 years, admitted to or selected from the Pediatric Department of Yixing Hospital of Traditional Chinese Medicine between June 2022 and June 2023. Data were gathered through a comprehensive questionnaire survey on risk factors associated with RRTI. The dataset was randomly divided into a training cohort (n = 211) and a validation cohort (n = 90) in a 7:3 ratio. Significant variables were selected using LASSO regression in the training cohort to construct the nomogram, the performance of which was evaluated through Receiver Operating Characteristic (ROC) curves, calibration plots, and Decision Curve Analysis (DCA). RESULTS The LASSO regression identified five predictors in the training cohort: picky eating, age at first antibiotic use, antibiotic use within the previous year, allergic conditions, secondhand smoke exposure. Based on them, the nomogram exhibited an excellent discriminative ability, with an AUC of 0.902 (95 % CI: 0.860-0.944) and a C-index of 0.902 in the training cohort. The validation cohort showed an AUC of 0.826 (95 % CI: 0.742-0.909) and a C-index of 0.826, confirming a high predictive accuracy. Calibration plots showed close alignment with the ideal reference line, and DCA indicated a significant clinical net benefit. CONCLUSION Our nomogram can efficiently predict RRTI risk in children, thereby providing a personalized and graphical tool for early identification and intervention.
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Affiliation(s)
- Fei Xia
- Department of Respiratory Medicine, The Affiliated Wuxi People's Hospital, Wuxi Children's Hospital of Nanjing Medical University, Wuxi, 214023, China; Department of Pediatrics, Yixing Hospital of Traditional Chinese Medicine, Yixing, 214200, China
| | - Xi Zhou
- Department of Pediatrics, Yixing Hospital of Traditional Chinese Medicine, Yixing, 214200, China
| | - Yan Xiong
- Department of Pediatrics, Yixing Hospital of Traditional Chinese Medicine, Yixing, 214200, China
| | - Chenghui Yin
- Department of Pediatrics, Yixing Hospital of Traditional Chinese Medicine, Yixing, 214200, China
| | - Minhua Wang
- Department of Pediatrics, Yixing Hospital of Traditional Chinese Medicine, Yixing, 214200, China.
| | - Ling Li
- Department of Respiratory Medicine, The Affiliated Wuxi People's Hospital, Wuxi Children's Hospital of Nanjing Medical University, Wuxi, 214023, China; Department of Respiratory Medicine & Clinical Allergy Center, Affiliated Children's Hospital of Jiangnan University (Wuxi Children's Hospital), Wuxi, 214023, China.
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Thevathasan T, Spoormans E, Akin I, Fuernau G, Tebbe U, Haeusler KG, Oeff M, Hassager C, Fichtlscherer S, Zeymer U, Pöss J, Roßberg M, Abdel-Wahab M, Jobs A, de Waha S, Lemkes J, Thiele H, Skurk C, Freund A, Desch S. Early Risk Stratification of Patients After Successfully Resuscitated Out-of-Hospital Cardiac Arrest Without ST-Segment Elevation-The Angiography After Out-of-Hospital Cardiac Arrest Without ST-Segment Elevation (TOMAHAWK) Risk Score. Crit Care Explor 2025; 7:e1221. [PMID: 40042208 PMCID: PMC11884833 DOI: 10.1097/cce.0000000000001221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2025] Open
Abstract
OBJECTIVES Existing scores for risk stratification after out-of-hospital cardiac arrest (OHCA) are either medically outdated, limited to registry data, small cohorts, and certain healthcare systems only, or include rather complex calculations. The objective of this study was to develop an easy-to-use risk prediction score for short-term mortality in patients with successfully resuscitated OHCA without ST-segment elevation on the post-resuscitation electrocardiogram, derived from the Angiography after Out-of-Hospital Cardiac Arrest without ST-Segment Elevation (TOMAHAWK) trial. The risk score was externally validated in the Coronary Angiography after Cardiac Arrest Trial (COACT) cohort (shockable arrest rhythms only) and additional hospitals from Berlin, Germany (shockable and nonshockable arrest rhythms). DESIGN Predefined subanalysis of the TOMAHAWK trial. SETTING Development and external validation across 52 centers in three countries. PATIENTS Adult patients with successfully resuscitated OHCA and no ST-segment elevations. INTERVENTIONS Utilization of the TOMAHAWK risk score upon hospital admission. MEASUREMENTS AND MAIN RESULTS The risk score was developed using a backward stepwise regression analysis. Between one and four points were attributed to each variable in the risk score, resulting in a score with three risk categories for 30-day mortality: low (0-2), intermediate (3-6), and high (7-10). Five variables emerged as independent predictors for 30-day mortality and were used as risk score parameters: age of 72 years old or older, known diabetes, unshockable initial electrocardiogram rhythm, time until return of spontaneous circulation greater than or equal to 23 minutes, and admission arterial lactate level greater than or equal to 8 mmol/L. The 30-day mortality rates for each risk category were 23.6%, 68.8%, and 86.2%, respectively (p < 0.001) with a good discrimination at an area under the curve of 0.82. External validation in the COACT and Berlin cohorts showed short-term mortality rates of 23.1% and 20.4% (score 0-2), 44.8% and 48.1% (score 3-6), and 78.9% and 73.3% (score 7-10), respectively (each p < 0.001). CONCLUSIONS The TOMAHAWK risk score can be easily calculated in daily clinical practice and strongly correlated with mortality in patients with successfully resuscitated OHCA without ST-segment elevation on post-resuscitation electrocardiogram.
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Affiliation(s)
- Tharusan Thevathasan
- Department of Cardiology, Angiology and Intensive Care Medicine, Deutsches Herzzentrum der Charité (DHZC), Campus Benjamin Franklin, Berlin, Germany
- DZHK (German Centre for Cardiovascular Research), Berlin, Germany
- Berlin Institute of Health, Berlin, Germany
| | - Eva Spoormans
- Department of Cardiology, Amsterdam University Medical Centre, Amsterdam, The Netherlands
| | - Ibrahim Akin
- DZHK (German Centre for Cardiovascular Research), Berlin, Germany
- First Department of Medicine, University Medical Centre Mannheim, Faculty of Medicine Mannheim, University of Heidelberg, Mannheim, Germany
| | - Georg Fuernau
- Clinic for Internal Medicine II, Staedtisches Klinikum Dessau, Brandenburg Medical School, Dessau-Rosslau, Germany
| | - Ulrich Tebbe
- Institut Klinische Forschung GmbH, Detmold, Germany
| | | | | | - Christian Hassager
- Department of Cardiology, Rigshospitalet, Copenhagen, Denmark
- Department of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark
| | - Stephan Fichtlscherer
- Cardiology and Vascular Medicine Department, University Clinic Frankfurt, Frankfurt, Germany
| | - Uwe Zeymer
- Department of Cardiology, Klinikum Ludwigshafen, Ludwigshafen, Germany
| | - Janine Pöss
- Department of Internal Medicine/Cardiology, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
- Helios Health Institute, Leipzig, Germany
| | - Michelle Roßberg
- Department of Internal Medicine/Cardiology, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
- Helios Health Institute, Leipzig, Germany
| | - Mohamed Abdel-Wahab
- Department of Internal Medicine/Cardiology, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
- Helios Health Institute, Leipzig, Germany
| | - Alexander Jobs
- DZHK (German Centre for Cardiovascular Research), Berlin, Germany
- Department of Internal Medicine/Cardiology, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
- Helios Health Institute, Leipzig, Germany
| | - Suzanne de Waha
- Department of Cardiac Surgery, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
| | - Jorrit Lemkes
- Department of Cardiology, Amsterdam University Medical Centre, Amsterdam, The Netherlands
| | - Holger Thiele
- Department of Internal Medicine/Cardiology, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
- Helios Health Institute, Leipzig, Germany
| | - Carsten Skurk
- Department of Cardiology, Angiology and Intensive Care Medicine, Deutsches Herzzentrum der Charité (DHZC), Campus Benjamin Franklin, Berlin, Germany
- DZHK (German Centre for Cardiovascular Research), Berlin, Germany
| | - Anne Freund
- DZHK (German Centre for Cardiovascular Research), Berlin, Germany
- Department of Internal Medicine/Cardiology, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
- Helios Health Institute, Leipzig, Germany
| | - Steffen Desch
- DZHK (German Centre for Cardiovascular Research), Berlin, Germany
- Department of Internal Medicine/Cardiology, Heart Centre Leipzig at the University of Leipzig, Leipzig, Germany
- Helios Health Institute, Leipzig, Germany
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Barry N, Kendrick J, Molin K, Li S, Rowshanfarzad P, Hassan GM, Dowling J, Parizel PM, Hofman MS, Ebert MA. Evaluating the impact of the Radiomics Quality Score: a systematic review and meta-analysis. Eur Radiol 2025; 35:1701-1713. [PMID: 39794540 PMCID: PMC11835903 DOI: 10.1007/s00330-024-11341-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2024] [Revised: 11/15/2024] [Accepted: 12/09/2024] [Indexed: 01/13/2025]
Abstract
OBJECTIVES Conduct a systematic review and meta-analysis on the application of the Radiomics Quality Score (RQS). MATERIALS AND METHODS A search was conducted from January 1, 2022, to December 31, 2023, for systematic reviews which implemented the RQS. Identification of articles prior to 2022 was via a previously published review. Quality scores of individual radiomics papers, their associated criteria scores, and these scores from all readers were extracted. Errors in the application of RQS criteria were noted and corrected. The RQS of radiomics papers were matched with the publication date, imaging modality, and country, where available. RESULTS A total of 130 systematic reviews were included, and individual quality scores 117/130 (90.0%), criteria scores 98/130 (75.4%), and multiple reader data 24/130 (18.5%) were extracted. 3258 quality scores were correlated with the radiomics study date of publication. Criteria scoring errors were discovered in 39/98 (39.8%) of articles. Overall mean RQS was 9.4 ± 6.4 (95% CI, 9.1-9.6) (26.1% ± 17.8% (25.3%-26.7%)). Quality scores were positively correlated with publication year (Pearson R = 0.32, p < 0.01) and significantly higher after publication of the RQS (year < 2018, 5.6 ± 6.1 (5.1-6.1); year ≥ 2018, 10.1 ± 6.1 (9.9-10.4); p < 0.01). Only 233/3258 (7.2%) scores were ≥ 50% of the maximum RQS. Quality scores were significantly different across imaging modalities (p < 0.01). Ten criteria were positively correlated with publication year, and one was negatively correlated. CONCLUSION Radiomics study adherence to the RQS is increasing with time, although a vast majority of studies are developmental and rarely provide a high level of evidence to justify the clinical translation of proposed models. KEY POINTS Question What level of adherence to the Radiomics Quality Score have radiomics studies achieved to date, has it increased with time, and is it sufficient? Findings A meta-analysis of 3258 quality scores extracted from 130 review articles resulted in a mean score of 9.4 ± 6.4. Quality scores were positively correlated with time. Clinical relevance Although quality scores of radiomics studies have increased with time, many studies have not demonstrated sufficient evidence for clinical translation. As new appraisal tools emerge, the current role of the Radiomics Quality Score may change.
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Affiliation(s)
- Nathaniel Barry
- School of Physics, Mathematics and Computing, University of Western Australia, Crawley, WA, Australia.
- Centre for Advanced Technologies in Cancer Research (CATCR), Perth, WA, Australia.
| | - Jake Kendrick
- School of Physics, Mathematics and Computing, University of Western Australia, Crawley, WA, Australia
- Centre for Advanced Technologies in Cancer Research (CATCR), Perth, WA, Australia
- Australian Centre for Quantitative Imaging, Medical School, University of Western Australia, Crawley, WA, Australia
| | - Kaylee Molin
- School of Physics, Mathematics and Computing, University of Western Australia, Crawley, WA, Australia
| | - Suning Li
- School of Physics, Mathematics and Computing, University of Western Australia, Crawley, WA, Australia
- Australian Centre for Quantitative Imaging, Medical School, University of Western Australia, Crawley, WA, Australia
- Department of Radiation Oncology, Sir Charles Gairdner Hospital, Nedlands, WA, Australia
| | - Pejman Rowshanfarzad
- School of Physics, Mathematics and Computing, University of Western Australia, Crawley, WA, Australia
- Centre for Advanced Technologies in Cancer Research (CATCR), Perth, WA, Australia
| | - Ghulam M Hassan
- School of Physics, Mathematics and Computing, University of Western Australia, Crawley, WA, Australia
- Australian Centre for Quantitative Imaging, Medical School, University of Western Australia, Crawley, WA, Australia
| | - Jason Dowling
- The Australian e-Health Research Centre, CSIRO, Brisbane, QLD, Australia
| | - Paul M Parizel
- David Hartley Chair of Radiology, Royal Perth Hospital and University of Western Australia, Perth, WA, Australia
- Medical School, University of Western Australia, Perth, WA, Australia
| | - Michael S Hofman
- Prostate Cancer Theranostics and Imaging Centre of Excellence (ProsTIC); Molecular Imaging and Therapeutic Nuclear Medicine, Cancer Imaging, Peter MacCallum Centre, Melbourne, VIC, Australia
- Sir Peter MacCallum Department of Oncology, University of Melbourne, Melbourne, VIC, Australia
| | - Martin A Ebert
- School of Physics, Mathematics and Computing, University of Western Australia, Crawley, WA, Australia
- Centre for Advanced Technologies in Cancer Research (CATCR), Perth, WA, Australia
- Australian Centre for Quantitative Imaging, Medical School, University of Western Australia, Crawley, WA, Australia
- Department of Radiation Oncology, Sir Charles Gairdner Hospital, Nedlands, WA, Australia
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50
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Mann J, Lyons M, O'Rourke J, Davies S. Machine learning or traditional statistical methods for predictive modelling in perioperative medicine: A narrative review. J Clin Anesth 2025; 102:111782. [PMID: 39977974 DOI: 10.1016/j.jclinane.2025.111782] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2024] [Revised: 02/11/2025] [Accepted: 02/12/2025] [Indexed: 02/22/2025]
Abstract
Prediction of outcomes in perioperative medicine is key to decision-making and various prediction models have been created to help quantify and communicate those risks to both patients and clinicians. Increasingly, machine learning (ML) is being favoured over more traditional techniques to improve prediction of outcomes, however, the studies are of varying quality. It is also not known whether any increase in predictive performance using ML algorithms transpires into a clinically meaningful benefit. This coupled with the difficulty in interrogating ML algorithms is a potential cause of concern within the medical community. In this review, we provide a concise appraisal of studies which develop perioperative predictive ML models and compare predictive performance to traditional statistical models. The search strategy, title and abstract screening, and full-text reviews produced 37 studies for data extraction. Initially designed as a systematic review but due to the heterogeneity of the population and outcomes, was written in the narrative. Perioperative ML and traditional predictive models continue to be developed and published across a range of populations. This review highlights several studies which show that ML can enhance perioperative prediction models, although this is not universal, and performance for both methods remain context dependent. By focusing on relevant patient-centred outcomes, model interpretability, external validation, and maintaining high standards of reporting and methodological transparency, researchers can develop ML models alongside traditional methods to enhance clinical decision-making and improve patient care.
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Affiliation(s)
- Jason Mann
- Sheffield Teaching Hospitals NHS Foundation Trust, Royal Hallamshire Hospital, Anaesthesia and Operating Services, C-floor, Glossop Road, Sheffield, South Yorkshire S11 2JF, UK.
| | - Mathew Lyons
- SCREDS Clinical Lecturer in Anaesthesia, University of Edinburgh, UK
| | - John O'Rourke
- Anaesthetic Academic Clinical Fellow, York and Scarborough Teaching Hospitals, York, UK
| | - Simon Davies
- Reader in Anaesthesia, Centre for Health and Population Sciences, Hull York Medical School, UK
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