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Babinskas J, Matijošytė I. Laccase Functional Analysis: Substrates, Activity Assays, Challenges, and Prospects. Chembiochem 2025; 26:e202400939. [PMID: 39866020 DOI: 10.1002/cbic.202400939] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2024] [Revised: 01/21/2025] [Accepted: 01/23/2025] [Indexed: 01/28/2025]
Abstract
Enzyme functional analysis is a multifaceted process that can be used for various purposes, such as screening for specific activities, as well as developing, optimising, and validating processes or final products. Functional analysis methods are crucial for assessing enzyme performance and catalytic properties. Laccase, a well-known blue multi-copper oxidase, holds immense potential in diverse industries such as pharmaceuticals, paper and pulp, food and beverages, textiles, and biorefineries due to its clean oxidation process and versatility in handling a wide range of substrates. Despite its prominence, the use of laccase encounters challenges in selecting appropriate functional analysis substrates and methods. This review delves into the substrates utilised in qualitative and quantitative techniques for laccase activity analysis. Although laccase catalyses mono-electron oxidation of aromatic hydroxyl, amine, and thiol compounds efficiently, using molecular oxygen as an electron acceptor, the review identifies limitations in the specificity of the commonly employed substrates, concerns regarding the stability of certain compounds and highlights potential strategies.
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Affiliation(s)
- Justinas Babinskas
- Sector of Applied Biocatalysis, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio ave. 7, Vilnius, Lithuania, LT-10257
| | - Inga Matijošytė
- Sector of Applied Biocatalysis, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio ave. 7, Vilnius, Lithuania, LT-10257
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Chaturvedi M, Kaur N, Alam S, Sharma S. Sustainable Approach for Degradation of Low-Density Polyethylene Plastic Waste Using Ligninolytic White Rot Fungus. J Basic Microbiol 2025; 65:e2400442. [PMID: 39623736 DOI: 10.1002/jobm.202400442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2024] [Revised: 11/11/2024] [Accepted: 11/18/2024] [Indexed: 04/08/2025]
Abstract
Bisphenol A (BPA), an endocrine disruptor is used in manufacturing of polycarbonate plastics for food-drink packaging. In the present study, optimized set of conditions to degrade commercial grade BPA has been used and applied in degrading shredded leached low-density polyethylene (LDPE) residues and its leachate (198 µg/L BPA) using white rot fungus Hypocrea lixii. One-at-a-time method showed maximum BPA degradation of 98.73 ± 0.02% with 190.1 ± 0.2 U/L laccase and 1913.2 ± 0.3 U/L lignin peroxidase in glucose-yeast extract-malt extract-peptone (GYMP) medium supplemented with 5% sawdust, mediators-CuSO4 (0.2 mM), veratryl alcohol (0.1 mM) and Tween 80 (0.1 mM). Three sets were prepared by dissolving these optimized nutritional components in leachates-A (only leachate), B (leached LDPE residues in leachate) and C (leached LDPE residues, sawdust in leachate). All sets showed 100% degradation in 5 days. Cracks and holes in degraded LDPE pieces was confirmed by SEM analysis and changes in functional groups by FTIR. Toxicity assay of treated leachate on soil microfauna revealed the elimination of BPA as it supported sufficient microbial growth of soil bacteria. Thus, the present process provides a sustainable solution for the management of LDPE with the possibility of using treated leachate for irrigation.
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Affiliation(s)
- Mridula Chaturvedi
- Amity Institute of Biotechnology, Amity University, Noida, Uttar Pradesh, India
| | - Navpreet Kaur
- Amity Institute of Biotechnology, Amity University, Noida, Uttar Pradesh, India
| | - Samsul Alam
- Analytical Division, Institute of Pesticide Formulation Technology (IPFT), Gurgaon, Haryana, India
| | - Shashi Sharma
- Amity Institute of Biotechnology, Amity University, Noida, Uttar Pradesh, India
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Staita K, Khmaissa M, Akrout I, Greff S, Ghariani B, Turbé-Doan A, Lambert J, Lomascolo A, Albert Q, Faulds CB, Sciara G, Zouari-Mechichi H, Record E, Mechichi T. Biotransformation of the Fluoroquinolone Antibiotic, Levofloxacin, by the Free and Immobilized Secretome of Coriolopsis gallica. J Fungi (Basel) 2024; 10:861. [PMID: 39728357 DOI: 10.3390/jof10120861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2024] [Revised: 12/09/2024] [Accepted: 12/10/2024] [Indexed: 12/28/2024] Open
Abstract
Antibiotics play a crucial role in human and animal medical healthcare, but widespread use and overuse of antibiotics poses alarming health and environmental issues. Fluoroquinolones constitute a class of antibiotics that has already become ubiquitous in the environment, and their increasing use and high persistence prompt growing concern. Here we investigated a fungal secretome prepared from the white-rot fungus Coriolopsis gallica, which is able to effectively degrade the environmentally persistent fluoroquinolone, levofloxacin. We tested various physical-chemical factors such as concentrations of 1-hydroxybenzotriazol (HBT), of enzyme, and of antibiotic, and pH and temperature of the reaction for biotransformation of the antibiotic. We compared the free with the immobilized Coriolopsis gallica secretome proteins, and analyzed the collective reaction products for residual activity against E. coli (growth inhibition test). We also performed HPLC analysis. The results show that treatment with the free secretome yielded a highest removal efficiency of 50 mg L-1 levofloxacin in the presence of 2.5 mM HBT, whereas the immobilized secretome was only able to degrade 10 mg L-1 levofloxacin with the same concentration of mediator, but presenting the advantage of being reusable.
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Affiliation(s)
- Karima Staita
- Laboratoire de Biochimie et de Génie Enzymatique des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax 3038, Tunisia
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Marwa Khmaissa
- Laboratoire de Biochimie et de Génie Enzymatique des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax 3038, Tunisia
| | - Imen Akrout
- Laboratoire de Biochimie et de Génie Enzymatique des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax 3038, Tunisia
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Stéphane Greff
- IMBE, UMR 7263, CNRS, IRD, Aix-Marseille Université, Avignon Université, Station Marine d'Endoume, Rue de la Batterie des Lions, 13007 Marseille, France
| | - Bouthaina Ghariani
- Laboratoire de Biochimie et de Génie Enzymatique des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax 3038, Tunisia
| | - Annick Turbé-Doan
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Julien Lambert
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Anne Lomascolo
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Quentin Albert
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Craig B Faulds
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Giuliano Sciara
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Héla Zouari-Mechichi
- Laboratoire de Biochimie et de Génie Enzymatique des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax 3038, Tunisia
| | - Eric Record
- INRAE, Aix Marseille Univ BBF, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Tahar Mechichi
- Laboratoire de Biochimie et de Génie Enzymatique des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax 3038, Tunisia
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Wu X, Cai C, Cen Q, Fu G, Lu X, Zheng H, Zhang Q, Cui X, Liu Y. Efficient catalytic removal of phenolic pollutants by laccase from Coriolopsis gallica: Binding interaction and polymerization mechanism. Int J Biol Macromol 2024; 279:135272. [PMID: 39226979 DOI: 10.1016/j.ijbiomac.2024.135272] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2024] [Revised: 08/30/2024] [Accepted: 08/31/2024] [Indexed: 09/05/2024]
Abstract
Laccase is a green catalyst that can efficiently catalyze phenolic pollutants, and its catalytic efficiency is closely related to the interaction between enzyme and substrates. To investigate the binding effects between enzyme and phenolic pollutants, phenol, p-chlorophenol, and bisphenol A were used as substrates in this study. We focused on the removal and catalytic mechanism of these pollutants in water using yellow laccase derived from Coriolopsis gallica. The enzymatic catalytic products were characterized using Ultraviolet-Visible Absorption Spectroscopy (UV-Vis), Fourier Transform Infrared Spectroscopy (FTIR), and High-Resolution Mass Spectrometry (HRMS), and the catalytic mechanism of laccase on phenolic pollutants was further explored by molecular docking. Based on the structural characterization and molecular docking results, the possible polymerization pathways of these phenolic compounds were speculated. Laccase catalyzed phenol to produce phenolic hydroxyl radicals, their para-radicals, and ortho-radicals, which polymerized to form oligomers linked by benzene‑oxygen-benzene and benzene-benzene. P-chlorophenol produced phenolic hydroxyl radicals and their ortho-radicals, polymerizing to form oligomers connected by benzene‑oxygen-benzene or benzene-benzene. The CC bond of the isopropyl group of bisphenol A broke to formed an intermediate product, which was further polymerized to formed a benzene‑oxygen-benzene linked oligomer.
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Affiliation(s)
- Xiaodan Wu
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China; International Institute of Food Innovation Co., Ltd., Nanchang University, Nanchang, Jiangxi 330200, China
| | - Changjun Cai
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China
| | - Qingjing Cen
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China
| | - Guiming Fu
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China; International Institute of Food Innovation Co., Ltd., Nanchang University, Nanchang, Jiangxi 330200, China.
| | - Xuan Lu
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China
| | - Hongli Zheng
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China; International Institute of Food Innovation Co., Ltd., Nanchang University, Nanchang, Jiangxi 330200, China
| | - Qi Zhang
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China
| | - Xian Cui
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China
| | - Yuhuan Liu
- State Key Laboratory of Food Science and Resources, Engineering Research Center for Biomass Conversion of Ministry of Education, Nanchang University, Nanchang, Jiangxi 330047, China
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Xu J, Zhang Y, Zhu X, Shen C, Liu S, Xiao Y, Fang Z. Direct evolution of an alkaline fungal laccase to degrade tetracyclines. Int J Biol Macromol 2024; 277:134534. [PMID: 39111464 DOI: 10.1016/j.ijbiomac.2024.134534] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 04/06/2024] [Accepted: 08/04/2024] [Indexed: 08/13/2024]
Abstract
A fungal laccase-mediator system capable of high effectively oxidizing tetracyclines under a wide pH range will benefit environmental protection. This study reported a directed evolution of a laccase PIE5 to improve its performance on tetracyclines oxidization at alkaline conditions. Two mutants, namely MutA (D229N/A244V) and MutB (N123A/D229N/A244V) were obtained. Although they shared a similar optimum pH and temperature as PIE5, the two mutants displayed approximately 2- and 5-fold higher specific activity toward the mediators ABTS and guaiacol at pHs 4.0 to 6.5, respectively. Simultaneously, their catalytic efficiency increased by 8.0- and 6.4-fold compared to PIE5. At a pH range of 5-8 and 28 °C, MutA or MutB at a final concentration of 2.5 U·mL-1 degraded 77 % and 81 % of 100 mg·L-1 tetracycline within 10 min, higher than PIE5 (45 %). Furthermore, 0.1 U·mL-1 MutA or MutB completely degraded 100 mg·L-1 chlortetracycline within 6 min in the presence of 0.1 mM ABTS. At pH 8.0, MutA degraded tetracycline and chlortetracycline following the routine pathways were reported previously based on LC-MS analysis.
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Affiliation(s)
- Jie Xu
- School of Life Sciences, Anhui University, 230601 Hefei, Anhui, China; Anhui Key Laboratory of Biocatalysis and Modern Biomanufacturing, 230601 Hefei, Anhui, China; Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, 230601 Hefei, Anhui, China
| | - Yinliang Zhang
- School of Life Sciences, Anhui University, 230601 Hefei, Anhui, China; Anhui Key Laboratory of Biocatalysis and Modern Biomanufacturing, 230601 Hefei, Anhui, China; Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, 230601 Hefei, Anhui, China
| | - Xuelin Zhu
- School of Life Sciences, Anhui University, 230601 Hefei, Anhui, China; Anhui Key Laboratory of Biocatalysis and Modern Biomanufacturing, 230601 Hefei, Anhui, China; Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, 230601 Hefei, Anhui, China
| | - Chen Shen
- School of Life Sciences, Anhui University, 230601 Hefei, Anhui, China; Anhui Key Laboratory of Biocatalysis and Modern Biomanufacturing, 230601 Hefei, Anhui, China; Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, 230601 Hefei, Anhui, China
| | - Shenglong Liu
- School of Life Sciences, Anhui University, 230601 Hefei, Anhui, China; Anhui Key Laboratory of Biocatalysis and Modern Biomanufacturing, 230601 Hefei, Anhui, China; Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, 230601 Hefei, Anhui, China
| | - Yazhong Xiao
- School of Life Sciences, Anhui University, 230601 Hefei, Anhui, China; Anhui Key Laboratory of Biocatalysis and Modern Biomanufacturing, 230601 Hefei, Anhui, China; Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, 230601 Hefei, Anhui, China.
| | - Zemin Fang
- School of Life Sciences, Anhui University, 230601 Hefei, Anhui, China; Anhui Key Laboratory of Biocatalysis and Modern Biomanufacturing, 230601 Hefei, Anhui, China; Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, 230601 Hefei, Anhui, China.
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Bossa M, Monesterolo NE, Monge MDP, Rhein P, Chulze SN, Alaniz-Zanon MS, Chiotta ML. Fungal Laccases and Fumonisin Decontamination in Co-Products of Bioethanol from Maize. Toxins (Basel) 2024; 16:350. [PMID: 39195760 PMCID: PMC11359460 DOI: 10.3390/toxins16080350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2024] [Revised: 08/02/2024] [Accepted: 08/08/2024] [Indexed: 08/29/2024] Open
Abstract
Maize (Zea mays L.) may be infected by Fusarium verticillioides and F. proliferatum, and consequently contaminated with fumonisins (FBs), as well as the co-products of bioethanol intended for animal feed. Laccase enzymes have a wide industrial application such as mycotoxin degradation. The aims were to isolate and identify fungal laccase-producing strains, to evaluate laccase production, to determine the enzymatic stability under fermentation conditions, and to analyse the effectiveness in vitro of enzymatic extracts (EEs) containing laccases in degrading FB1. Strains belonging to Funalia trogii, Phellinus tuberculosus, Pleurotus ostreatus, Pycnoporus sanguineus and Trametes gallica species showed laccase activity. Different isoforms of laccases were detected depending on the evaluated species. For the FB1 decontamination assays, four enzymatic activities (5, 10, 15 and 20 U/mL) were tested, in the absence and presence of vanillic acid (VA) and 2,2,6,6-tetramethylpiperidine-N-oxyl (TEMPO) as redox mediators (1 and 10 mM). Trametes gallica B4-IMICO-RC EE was the most effective strain in buffer, achieving a 60% of FB1 reduction. Laccases included in EEs remained stable at different alcoholic degrees in maize steep liquor (MSL), but no significant FB1 reduction was observed under the conditions evaluated using MSL. This study demonstrate that although laccases could be good candidates for the development of a strategy to reduce FB1, further studies are necessary to optimise this process in MSL.
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Affiliation(s)
- Marianela Bossa
- Instituto de Investigación en Micología y Micotoxicología (IMICO), CONICET-Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, Río Cuarto 5800, Argentina; (M.B.); (M.d.P.M.); (S.N.C.)
| | - Noelia Edith Monesterolo
- Instituto de Biotecnología Ambiental y de la Salud (INBIAS), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, Río Cuarto 5800, Argentina;
| | - María del Pilar Monge
- Instituto de Investigación en Micología y Micotoxicología (IMICO), CONICET-Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, Río Cuarto 5800, Argentina; (M.B.); (M.d.P.M.); (S.N.C.)
| | - Paloma Rhein
- Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, Río Cuarto 5800, Argentina;
| | - Sofía Noemí Chulze
- Instituto de Investigación en Micología y Micotoxicología (IMICO), CONICET-Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, Río Cuarto 5800, Argentina; (M.B.); (M.d.P.M.); (S.N.C.)
| | - María Silvina Alaniz-Zanon
- Instituto de Investigación en Micología y Micotoxicología (IMICO), CONICET-Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, Río Cuarto 5800, Argentina; (M.B.); (M.d.P.M.); (S.N.C.)
| | - María Laura Chiotta
- Instituto de Investigación en Micología y Micotoxicología (IMICO), CONICET-Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, Río Cuarto 5800, Argentina; (M.B.); (M.d.P.M.); (S.N.C.)
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Radveikienė I, Vidžiūnaitė R, Meškys R, Časaitė V. Blue and Yellow Laccases from Alternaria sp. Strain HU: Characterization and Immobilization on Magnetic Nanoparticles. J Fungi (Basel) 2024; 10:559. [PMID: 39194885 DOI: 10.3390/jof10080559] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Revised: 07/28/2024] [Accepted: 08/06/2024] [Indexed: 08/29/2024] Open
Abstract
Laccases are important and valuable enzymes with a great potential for biotechnological applications. In this study, two novel laccases, LacHU1 and LacHU2, from Alternaria sp. HU have been purified and characterized. The molecular mass of each isoenzyme was ~66 kDa. LacHU1 laccases was yellow and had no typical blue oxidase spectra and LacHU2 had a blue color and characteristic absorption spectra. The catalytic efficiency of LacHU1 for most substrates was higher than that of LacHU2 laccase. Both isoenzymes effectively oxidize flavonoids. Alternaria sp. laccases were successfully immobilized on magnetic nanoparticles. The thermostability of immobilized laccases increased and optimal pH shifted to more alkaline compared to the free laccases. Potential applications of laccases from Alternaria sp. HU are in the oxidation of flavonoids in cotton or in water treatment processes.
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Affiliation(s)
- Ingrida Radveikienė
- Life Sciences Center, Institute of Biochemistry, Vilnius University, Sauletekio Av. 7, 10257 Vilnius, Lithuania
| | - Regina Vidžiūnaitė
- Life Sciences Center, Institute of Biochemistry, Vilnius University, Sauletekio Av. 7, 10257 Vilnius, Lithuania
| | - Rolandas Meškys
- Life Sciences Center, Institute of Biochemistry, Vilnius University, Sauletekio Av. 7, 10257 Vilnius, Lithuania
| | - Vida Časaitė
- Life Sciences Center, Institute of Biochemistry, Vilnius University, Sauletekio Av. 7, 10257 Vilnius, Lithuania
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Buzzo BB, Lima NSM, Pereira PAM, Gomes-Pepe ES, Sartini CCF, Lemos EGDM. Lignin degradation by a novel thermophilic and alkaline yellow laccase from Chitinophaga sp. Microbiol Spectr 2024; 12:e0401323. [PMID: 38712938 PMCID: PMC11237711 DOI: 10.1128/spectrum.04013-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Accepted: 03/19/2024] [Indexed: 05/08/2024] Open
Abstract
Laccases (EC 1.10.3.2) are oxidoreductases that belong to the multicopper oxidase subfamily and are classified as yellow/white or blue according to their absorption spectrum. Yellow laccases are more useful for industrial processes since they oxidize nonphenolic compounds in the absence of a redox mediator and stand out for being more stable and functional under extreme conditions. This study aimed to characterize a new laccase that was predicted to be present in the genome of Chitinophaga sp. CB10 - Lac_CB10. Lac_CB10, with a molecular mass of 100.06 kDa, was purified and characterized via biochemical assays using guaiacol as a substrate. The enzyme demonstrated extremophilic characteristics, exhibiting relative activity under alkaline conditions (CAPS buffer pH 10.5) and thermophilic conditions (80-90°C), as well as maintaining its activity above 50% for 5 h at 80°C and 90°C. Furthermore, Lac_CB10 presented a spectral profile typical of yellow laccases, exhibiting only one absorbance peak at 300 nm (at the T2/T3 site) and no peak at 600 nm (at the T1 site). When lignin was degraded using copper as an inducer, 52.27% of the material was degraded within 32 h. These results highlight the potential of this enzyme, which is a novel yellow laccase with thermophilic and alkaline activity and the ability to act on lignin. This enzyme could be a valuable addition to the biorefinery process. In addition, this approach has high potential for industrial application and in the bioremediation of contaminated environments since these processes often occur at extreme temperatures and pH values. IMPORTANCE The characterization of the novel yellow laccase, Lac_CB10, derived from Chitinophaga sp. CB10, represents a significant advancement with broad implications. This enzyme displays exceptional stability and functionality under extreme conditions, operating effectively under both alkaline (pH 10.5) and thermophilic (80-90°C) environments. Its capability to maintain considerable activity over extended periods, even at high temperatures, showcases its potential for various industrial applications. Moreover, its distinctive ability to efficiently degrade lignin-demonstrated by a significant 52.27% degradation within 32 h-signifies a promising avenue for biorefinery processes. This newfound laccase's characteristics position it as a crucial asset in the realm of bioremediation, particularly in scenarios involving contamination at extreme pH and temperature levels. The study's findings highlight the enzyme's capacity to address challenges in industrial processes and environmental cleanup, signifying its vital role in advancing biotechnological solutions.
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Affiliation(s)
- Bárbara Bonfá Buzzo
- Department of Agricultural, Livestock and Environmental Biotechnology, São Paulo State University Júlio de Mesquita Filho, Jaboticabal, São Paulo, Brazil
- Molecular Biology Laboratory, Institute for Research in Bioenergy (IPBEN), Jaboticabal, São Paulo, Brazil
- Agricultural Microbiology Graduate Program at UNESP, Jaboticabal, São Paulo, Brazil
| | - Natália Sarmanho Monteiro Lima
- Department of Agricultural, Livestock and Environmental Biotechnology, São Paulo State University Júlio de Mesquita Filho, Jaboticabal, São Paulo, Brazil
- Molecular Biology Laboratory, Institute for Research in Bioenergy (IPBEN), Jaboticabal, São Paulo, Brazil
- Agricultural Microbiology Graduate Program at UNESP, Jaboticabal, São Paulo, Brazil
| | - Pâmela Aparecida Maldaner Pereira
- Department of Agricultural, Livestock and Environmental Biotechnology, São Paulo State University Júlio de Mesquita Filho, Jaboticabal, São Paulo, Brazil
- Molecular Biology Laboratory, Institute for Research in Bioenergy (IPBEN), Jaboticabal, São Paulo, Brazil
| | - Elisângela Soares Gomes-Pepe
- Department of Agricultural, Livestock and Environmental Biotechnology, São Paulo State University Júlio de Mesquita Filho, Jaboticabal, São Paulo, Brazil
- Molecular Biology Laboratory, Institute for Research in Bioenergy (IPBEN), Jaboticabal, São Paulo, Brazil
| | | | - Eliana Gertrudes de Macedo Lemos
- Department of Agricultural, Livestock and Environmental Biotechnology, São Paulo State University Júlio de Mesquita Filho, Jaboticabal, São Paulo, Brazil
- Molecular Biology Laboratory, Institute for Research in Bioenergy (IPBEN), Jaboticabal, São Paulo, Brazil
- Agricultural Microbiology Graduate Program at UNESP, Jaboticabal, São Paulo, Brazil
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Patel SKS, Gupta RK, Karuppanan KK, Padhi DK, Ranganathan S, Paramanantham P, Lee JK. Trametes versicolor Laccase-Based Magnetic Inorganic-Protein Hybrid Nanobiocatalyst for Efficient Decolorization of Dyes in the Presence of Inhibitors. MATERIALS (BASEL, SWITZERLAND) 2024; 17:1790. [PMID: 38673147 PMCID: PMC11051536 DOI: 10.3390/ma17081790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2024] [Revised: 04/08/2024] [Accepted: 04/10/2024] [Indexed: 04/28/2024]
Abstract
In the present investigation, an ecofriendly magnetic inorganic-protein hybrid system-based enzyme immobilization was developed using partially purified laccase from Trametes versicolor (TvLac), Fe3O4 nanoparticles, and manganese (Mn), and was successfully applied for synthetic dye decolorization in the presence of enzyme inhibitors. After the partial purification of crude TvLac, the specific enzyme activity reached 212 U∙mg total protein-1. The synthesized Fe3O4/Mn3(PO4)2-laccase (Fe3O4/Mn-TvLac) and Mn3(PO4)2-laccase (Mn-TvLac) nanoflowers (NFs) exhibited encapsulation yields of 85.5% and 90.3%, respectively, with relative activities of 245% and 260%, respectively, compared with those of free TvLac. One-pot synthesized Fe3O4/Mn-TvLac exhibited significant improvements in catalytic properties and stability compared to those of the free enzyme. Fe3O4/Mn-TvLac retained a significantly higher residual activity of 96.8% over that of Mn-TvLac (47.1%) after 10 reuse cycles. The NFs showed potential for the efficient decolorization of synthetic dyes in the presence of enzyme inhibitors. For up to five reuse cycles, Fe3O4/Mn-TvLac retained a decolorization potential of 81.1% and 86.3% for Coomassie Brilliant Blue R-250 and xylene cyanol, respectively. The synthesized Fe3O4/Mn-TvLac showed a lower acute toxicity towards Vibrio fischeri than pure Fe3O4 nanoparticles did. This is the first report of the one-pot synthesis of biofriendly magnetic protein-inorganic hybrids using partially purified TvLac and Mn.
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Affiliation(s)
| | | | | | | | | | | | - Jung-Kul Lee
- Department of Chemical Engineering, Konkuk University, Seoul 05029, Republic of Korea; (S.K.S.P.); (R.K.G.); (K.K.K.); (D.K.P.); (S.R.); (P.P.)
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Zouari-Mechichi H, Benali J, Alessa AH, Hadrich B, Mechichi T. Efficient Decolorization of the Poly-Azo Dye Sirius Grey by Coriolopsis gallica Laccase-Mediator System: Process Optimization and Toxicity Assessment. Molecules 2024; 29:477. [PMID: 38257390 PMCID: PMC10819905 DOI: 10.3390/molecules29020477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Revised: 01/12/2024] [Accepted: 01/15/2024] [Indexed: 01/24/2024] Open
Abstract
The textile industry produces high volumes of colored effluents that require multiple treatments to remove non-adsorbed dyes, which could be recalcitrant due to their complex chemical structure. Most of the studies have dealt with the biodegradation of mono or diazo dyes but rarely with poly-azo dyes. Therefore, the aim of this paper was to study the biodegradation of a four azo-bond dye (Sirius grey) and to optimize its decolorization conditions. Laccase-containing cell-free supernatant from the culture of a newly isolated fungal strain, Coriolopsis gallica strain BS9 was used in the presence of 1-hydroxybenzotriazol (HBT) to optimize the dye decolorization conditions. A Box-Benken design with four factors, namely pH, enzyme concentration, HBT concentration, and dye concentration, was performed to determine optimal conditions for the decolorization of Sirius grey. The optimal conditions were pH 5, 1 U/mL of laccase, 1 mM of HBT, and 50 mg/L of initial dye concentration, ensuring a decolorization yield and rate of 87.56% and 2.95%/min, respectively. The decolorized dye solution showed a decrease in its phytotoxicity (Germination index GI = 80%) compared to the non-treated solution (GI = 29%). This study suggests that the laccase-mediator system could be a promising alternative for dye removal from textile wastewater.
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Affiliation(s)
- Héla Zouari-Mechichi
- Laboratory of Biochemistry and Enzymatic Engineering of Lipases, National Engineering School of Sfax (ENIS), University of Sfax, Sfax BP1173 3038, Tunisia; (H.Z.-M.); (J.B.)
| | - Jihen Benali
- Laboratory of Biochemistry and Enzymatic Engineering of Lipases, National Engineering School of Sfax (ENIS), University of Sfax, Sfax BP1173 3038, Tunisia; (H.Z.-M.); (J.B.)
| | - Abdulrahman H. Alessa
- Department of Biology, Faculty of Science, University of Tabuk, Tabuk 47512, Saudi Arabia;
| | - Bilel Hadrich
- Department of Chemical Engineering, College of Engineering, Imam Mohammad Ibn Saud Islamic University, IMSIU, Riyadh 11432, Saudi Arabia;
| | - Tahar Mechichi
- Laboratory of Biochemistry and Enzymatic Engineering of Lipases, National Engineering School of Sfax (ENIS), University of Sfax, Sfax BP1173 3038, Tunisia; (H.Z.-M.); (J.B.)
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Bhoyar SS, Chaudhari AU, Desai MA, Latpate RV, Sartale SD, Kodam KM. Wheat bran as an efficient agro-process waste for enhanced yellow laccase production by Lentinus tigrinus SSB_W2 and its application in anthraquinone dye degradation. 3 Biotech 2024; 14:33. [PMID: 38188311 PMCID: PMC10764685 DOI: 10.1007/s13205-023-03881-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Accepted: 12/07/2023] [Indexed: 01/09/2024] Open
Abstract
Lentinus tigrinus SSB_W2, isolated from Mahabaleshwar in the Western Ghats of Maharashtra, India, was employed to enhance laccase production in solid-state fermentation (SSF). The spectral analysis indicated that the laccase produced by L. tigrinus is a typical yellow laccase, exhibiting no absorption at 600 nm. Notably, this yellow laccase demonstrated exceptional catalytic activity, as confirmed by electrochemical analysis. Four agricultural processing wastes were evaluated as substrates for SSF, and the results showed that L. tigrinus effectively utilized wheat bran. Initial testing by one-factor-at-a-time method showed 3.79-fold increase in yellow laccase production, which subsequently increased to 6.51-fold after Plackett-Burman design. Moreover, employing response surface methodology resulted in 11.87-fold increase (108,472 IU gds-1) in laccase production. The utilization of yellow laccase for the biotransformation of various textile dyes was investigated, and it exhibited the highest degradation efficiency toward Reactive blue 4, a recalcitrant anthraquinone dye, with a rate of 18.36 mg L-1 h-1, for an initial concentration of 1000 mg L-1. Supplementary Information The online version contains supplementary material available at 10.1007/s13205-023-03881-9.
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Affiliation(s)
- Seema S. Bhoyar
- Division of Biochemistry, Department of Chemistry, Savitribai Phule Pune University, Pune, 411007 India
| | - Ashvini U. Chaudhari
- Division of Biochemistry, Department of Chemistry, Savitribai Phule Pune University, Pune, 411007 India
| | - Mangesh A. Desai
- Department of Physics, Savitribai Phule Pune University, Pune, 411007 India
| | - Raosaheb V. Latpate
- Department of Statistics, Savitribai Phule Pune University, Pune, 411007 India
| | | | - Kisan M. Kodam
- Division of Biochemistry, Department of Chemistry, Savitribai Phule Pune University, Pune, 411007 India
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Patel SKS, Gupta RK, Kim IW, Lee JK. Coriolus versicolor laccase-based inorganic protein hybrid synthesis for application in biomass saccharification to enhance biological production of hydrogen and ethanol. Enzyme Microb Technol 2023; 170:110301. [PMID: 37598507 DOI: 10.1016/j.enzmictec.2023.110301] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 07/23/2023] [Accepted: 07/25/2023] [Indexed: 08/22/2023]
Abstract
In this study, a bio-friendly inorganic protein hybrid-based enzyme immobilization system using partially purified Coriolus versicolor laccase (CvLac) was successfully applied to biomass hydrolysis for the enhancement of sugar production aimed at generating biofuels. After four days of incubation, the maximum CvLac production was achieved at 140 U/mg of total protein in the presence of inducers such as copper and wheat bran after four days of incubation. Crude CvLac immobilized through inorganic protein hybrids such as nanoflowers (NFs) using zinc as Zn3(PO4)2/CvLac hybrid NFs (Zn/CvLac-NFs) showed a maximum encapsulation yield of 93.4% and a relative activity of 265% compared to free laccase. The synthesized Zn/CvLac-NFs exhibited significantly improved activity profiles and stability compared to free enzymes. Furthermore, Zn/CvLac-NFs retained a significantly high residual activity of 96.2% after ten reuse cycles. The saccharification of poplar biomass improved ∼2-fold in the presence of Zn/CvLac-NFs, with an 8-fold reduction in total phenolics compared to the control. The Zn/CvLac-NFs treated biomass hydrolysate showed high biological hydrogen (H2) production and ethanol conversion efficiency of up to 2.68 mol/mol of hexose and 79.0% compared to the control values of 1.27 mol of H2/mol of hexose and 58.4%, respectively. The CvLac hybrid NFs are the first time reported for biomass hydrolysis, and a significant enhancement in the production of hydrogen and ethanol was reported. The synthesis of such NFs based on crude forms of diverse enzymes can potentially be extended to a broad range of biotechnological applications.
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Affiliation(s)
- Sanjay K S Patel
- Department of Chemical Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea
| | - Rahul K Gupta
- Department of Chemical Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea
| | - In-Won Kim
- Department of Chemical Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea.
| | - Jung-Kul Lee
- Department of Chemical Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea.
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Neto FS, Fernandes de Melo Neta MM, Sales MB, Silva de Oliveira FA, de Castro Bizerra V, Sanders Lopes AA, de Sousa Rios MA, Santos JCSD. Research Progress and Trends on Utilization of Lignocellulosic Residues as Supports for Enzyme Immobilization via Advanced Bibliometric Analysis. Polymers (Basel) 2023; 15:polym15092057. [PMID: 37177203 PMCID: PMC10181460 DOI: 10.3390/polym15092057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Revised: 03/05/2023] [Accepted: 04/24/2023] [Indexed: 05/15/2023] Open
Abstract
Lignocellulosic biomasses are used in several applications, such as energy production, materials, and biofuels. These applications result in increased consumption and waste generation of these materials. However, alternative uses are being developed to solve the problem of waste generated in the industry. Thus, research is carried out to ensure the use of these biomasses as enzymatic support. These surveys can be accompanied using the advanced bibliometric analysis tool that can help determine the biomasses used and other perspectives on the subject. With this, the present work aims to carry out an advanced bibliometric analysis approaching the main studies related to the use of lignocellulosic biomass as an enzymatic support. This study will be carried out by highlighting the main countries/regions that carry out productions, research areas that involve the theme, and future trends in these areas. It was observed that there is a cooperation between China, USA, and India, where China holds 28.07% of publications in this area, being the country with the greatest impact in the area. Finally, it is possible to define that the use of these new supports is a trend in the field of biotechnology.
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Affiliation(s)
- Francisco Simão Neto
- Departamento de Engenharia Química, Universidade Federal do Ceará, Campus do Pici, Bloco 709, Fortaleza 60440-554, Brazil
| | | | - Misael Bessa Sales
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, Campus das Auroras, Redenção 62790-970, Brazil
| | - Francisco Arisson Silva de Oliveira
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, Campus das Auroras, Redenção 62790-970, Brazil
| | - Viviane de Castro Bizerra
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, Campus das Auroras, Redenção 62790-970, Brazil
| | - Ada Amélia Sanders Lopes
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, Campus das Auroras, Redenção 62790-970, Brazil
| | - Maria Alexsandra de Sousa Rios
- Departamento de Engenharia Mecânica, Universidade Federal do Ceará, Campus do Pici, Bloco 714, Fortaleza 60440-554, Brazil
| | - José Cleiton Sousa Dos Santos
- Departamento de Engenharia Química, Universidade Federal do Ceará, Campus do Pici, Bloco 709, Fortaleza 60440-554, Brazil
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, Campus das Auroras, Redenção 62790-970, Brazil
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Benatti ALT, Polizeli MDLTDM. Lignocellulolytic Biocatalysts: The Main Players Involved in Multiple Biotechnological Processes for Biomass Valorization. Microorganisms 2023; 11:microorganisms11010162. [PMID: 36677454 PMCID: PMC9864444 DOI: 10.3390/microorganisms11010162] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 12/11/2022] [Accepted: 12/26/2022] [Indexed: 01/10/2023] Open
Abstract
Human population growth, industrialization, and globalization have caused several pressures on the planet's natural resources, culminating in the severe climate and environmental crisis which we are facing. Aiming to remedy and mitigate the impact of human activities on the environment, the use of lignocellulolytic enzymes for biofuel production, food, bioremediation, and other various industries, is presented as a more sustainable alternative. These enzymes are characterized as a group of enzymes capable of breaking down lignocellulosic biomass into its different monomer units, making it accessible for bioconversion into various products and applications in the most diverse industries. Among all the organisms that produce lignocellulolytic enzymes, microorganisms are seen as the primary sources for obtaining them. Therefore, this review proposes to discuss the fundamental aspects of the enzymes forming lignocellulolytic systems and the main microorganisms used to obtain them. In addition, different possible industrial applications for these enzymes will be discussed, as well as information about their production modes and considerations about recent advances and future perspectives in research in pursuit of expanding lignocellulolytic enzyme uses at an industrial scale.
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Golgeri M DB, Mulla SI, Bagewadi ZK, Tyagi S, Hu A, Sharma S, Bilal M, Bharagava RN, Ferreira LFR, Gurumurthy DM, Nadda AK. A systematic review on potential microbial carbohydrases: current and future perspectives. Crit Rev Food Sci Nutr 2022; 64:438-455. [PMID: 35930295 DOI: 10.1080/10408398.2022.2106545] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Various studies have shown that the microbial proteins are often more stable than belongs to other sources like plant and animal origin. Hence, the interest in microbial enzymes has gained much attention due to many potential applications like bioenergy, biofuel production, biobleaching, bioconversion and so on. Additionally, recent trends revealed that the interest in isolating novel microbes from harsh environments have been the main focus of many scientists for various applications. Basically, industrially important enzymes can be categorized into mainly three groups: carbohydrases, proteases, and lipases. Among those, the enzymes especially carbohydrases involved in production of sugars. Carbohydrases include amylases, xylanases, pectinases, cellulases, chitinases, mannases, laccases, ligninases, lactase, glucanase, and glucose oxidase. Thus, here, an approach has been made to highlight five enzymes namely amylase, cellulase, laccase, pectinase, and xylanase from different sources with special emphasis on their properties, mechanism, applications, production optimization, purification, molecular approaches for its enhanced and stable production, and also biotechnological perspectives of its future development. Also, green and sustainable catalytic conversion strategies using nanoparticles of these enzymes have also been discussed. This review will provide insight into the carbohydrases importance and their usefulness that will help to the researchers working in this field.
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Affiliation(s)
- Dilshad Begum Golgeri M
- Department of Biochemistry, School of Allied Health Sciences, REVA University, Bangalore, India
- Department of Biochemistry, Indian Academy Degree College-Autonomous Kalyanagar, Bangalore, India
| | - Sikandar I Mulla
- Department of Biochemistry, School of Allied Health Sciences, REVA University, Bangalore, India
| | - Zabin K Bagewadi
- Department of Biotechnology, KLE Technological University, Hubballi, Karnataka, India
| | - Swati Tyagi
- IRRI- South Asia Regional centre, Varanasi, Uttar Pradesh, India
| | - Anyi Hu
- Institute of Urban Environment Chinese Academy of Sciences, CAS Key Laboratory of Urban Pollutant Conversion, Xiamen, China
| | - Swati Sharma
- University Institute of Biotechnology (UIBT), Chandigarh University, Mohali, Punjab, India
| | - Muhammad Bilal
- School of Life Science and Food Engineering, Huaiyin Institute of Technology, Huaian, China
| | - Ram Naresh Bharagava
- Department of Microbiology (DM), School for Environmental Sciences (SES), Babasaheb Bhimrao Ambedkar University (A Central University), Lucknow, Uttar Pradesh, India
| | | | | | - Ashok Kumar Nadda
- Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India
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