Pooled genetic analysis in ultrasound measured non-alcoholic fatty liver disease in Indian subjects: A pilot study

Table 1 List of single nucleotide polymorphisms included in the study

SNP No	rsID	Risk allele	Associated gene	Associated with	Ref.
1	rs738409	G	PNPLA3	Hepatic steatosis	[6]
2	rs4240624	A	PPP1R3B	Hepatic steatosis	[6]
3	rs2228603	T	NCAN	Hepatic steatosis	[6]
4	rs780094	A	GCKR	Hepatic steatosis	[6]
5	rs12137855	C	LYPLAL1	Hepatic steatosis	[6]
6	rs2645424	C	FDFT1	NAFLD activity score	[8]
7	rs343062	T	-	Degree of fibrosis	[8]
8	rs1227756	G	COL13A1	Lobular inflammation	[8]
9	rs6591182	G	-	Lobular inflammation	[8]
10	rs887304	A	EFCAB4B	Lobular inflammation	[8]
11	rs2499604	A	Intronic ZP4-TRNAP23P	Serum levels of alanine aminotransferase	[8]
12	rs6487679	C	PZP	Serum levels of alanine aminotransferase	[8]
13	rs1421201	C	-	Serum levels of alanine aminotransferase	[8]
14	rs2710833	T	-	Serum levels of alanine aminotransferase	[8]
15	rs2854116	A	APOC3	Hypertriglyceridemia in Asians	[9]
16	rs2854117	G	APOC3	Hypertriglyceridemia in Asians	[9]
17	rs2143571	A	SAMM50	NAFLD	[7]
18	rs2073080	T	PARVB	NAFLD	[7]
19	rs1390096	A	HS3ST1-HSP90AB2P	NAFLD	[7]
20	rs11206226	A	YIPF1	NAFLD	[7]

PNPLA3: Patatin-like phospholipase domain containing 3; NCAN: Neurocan; GCKR: Glucokinase regulatory protein; LYPLAL1: Lysophospholipase-like protein 1; PPP1R3B: Protein phosphatase 1, regulatory subunit 3B; PZP: Pregnancy zone protein.