Basic Research
Copyright ©The Author(s) 2003.
World J Gastroenterol. Dec 15, 2003; 9(12): 2720-2725
Published online Dec 15, 2003. doi: 10.3748/wjg.v9.i12.2720
Table 2 BLAST analysis of S. flexneri 2a alkA gene
BacteriaGene productGene functionIdentities (%)
Escherichia coli K123-methyl-adenine DNA glycosylase IIDNA - replication, repair, restriction/modification97%
Escherichia coli O157:H73-methyl-adenine DNA glycosylase IIMacromolecule synthesis, modification: DNA - replication, repair, restriction/modification97%
Salmonella typhimurium3-methyl-adenine DNA glycosylase IIUnknown74%
Ralstonia solanacearumputative transcription regulator proteinMiscellaneous; not classified regulator38%
Pseudomonas aeruginosaDNA-3-methyladenine glycosidase IIUnknown37%
Xanthomonas axonopodisDNA methylation and regulatory proteinUnknown35%
Mycobacterium bovisMethylated-DNA—protein-cysteine methyltransferaseAdaptative response34%
Mycobacterium tuberculosisalkA proteinUnknown34%
Vibrio choleraeada regulatory proteinUnknown32%
Bacillus anthracisDNA-3-methyladenine glycosidaseUnknown32%
Archaeoglobus fulgidus3-methyladenine DNA glycosylaseDNA repair at suboptimal and maybe even mesophilic temperatures30%