Comparison of genomic and transcriptional microbiome analysis in gastric cancer patients and healthy individuals

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

Case Control Study

World J Gastroenterol. Feb 21, 2023; 29(7): 1202-1218
Published online Feb 21, 2023. doi: 10.3748/wjg.v29.i7.1202

Table 1 List of significantly (P value < 0.05) different genera between DNA and RNA samples in the control, tumor, and tumor adjacent groups

	Increased or decreased at DNA level
	H	T	Tadj
H & T & Tadj
Haemophilus	Increased	Decreased	Increased
Methyloversatilis	Decreased	Decreased	Decreased
Neisseria	Increased	Increased	Increased
Peptostreptococcus	Increased	Increased	Increased
Prevotella	Increased	Increased	Increased
Pseudomonas	Decreased	Decreased	Decreased
Reyranella	Decreased	Decreased	Decreased
Sediminibacterium	Decreased	Decreased	Decreased
Staphylococcus	Decreased	Decreased	Decreased
Veillonella	Increased	Increased	Increased
H
Actinomyces	Increased
Gemella	Decreased
Helicobacter	Decreased
Streptococcus	Decreased
T & Tadj
Fusobacterium		Increased	Increased
Granulicatella		Increased	Increased
Porphyromonas		Increased	Increased
Solobacterium		Increased	Increased

The table presents only those bacteria genera, the mean relative abundance of which at least in one of the compared groups exceeded 1%.

Citation: Nikitina D, Lehr K, Vilchez-Vargas R, Jonaitis LV, Urba M, Kupcinskas J, Skieceviciene J, Link A. Comparison of genomic and transcriptional microbiome analysis in gastric cancer patients and healthy individuals. World J Gastroenterol 2023; 29(7): 1202-1218
URL: https://www.wjgnet.com/1007-9327/full/v29/i7/1202.htm
DOI: https://dx.doi.org/10.3748/wjg.v29.i7.1202

Nikitina D, Lehr K, Vilchez-Vargas R, Jonaitis LV, Urba M, Kupcinskas J, Skieceviciene J, Link A. Comparison of genomic and transcriptional microbiome analysis in gastric cancer patients and healthy individuals. World J Gastroenterol 2023; 29(7): 1202-1218 [PMID: 36926663 DOI: 10.3748/wjg.v29.i7.1202]

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