Integrated network analysis of transcriptomic and protein-protein interaction data in taurine-treated hepatic stellate cells

Table 2 Cluster of differentially expressed genes in the protein-protein interaction network

Cluster	Score	Nodes	Edges	Genes
1	7.818	12	43	TCOF1, MMRN1, TGFB1, FIGF, VEGFB, TIMP3, FGB, EGFR, F7, EGF, BDNF, MMP9
2	5.556	10	25	ESR1, DNAH8, MMP2, JAK2, SRC, ESR2, CYP19A1, GPER, NPS, NR3C1
3	4.286	29	60	NPSR1, PIKFYVE, KLHL11, KBTBD8, PMS2, XRCC4, RCVRN, TAS2R9, CACNA1B, RAD52, OGN, NPFFR2, WRN, GRPR, CABP2, RYR1, ZBTB16, ASB5, CAMK2D, BGN, RAD51B, CCL25, UBE2V1, HECW2, OPRM1, PRKACB, TAB1, HTR5A, ADCY4
4	4	4	6	ALDH4A1, GCSH, DBT, OGDH
5	4	4	6	THSD7B, ADAMTSL1, ADAMTS1, THSD1
6	4	4	6	C2CD3, NPHP1, HAUS6, HAUS1
7	3.429	8	12	RASL10A, FRYL, LRRC69, DIRAS1, ERAS, RAP1A, RANBP2, OMG
8	3	3	3	RGPD1, NUTF2, KPNA5
9	3	3	3	UTY, ZFY, CECR2
10	3	3	3	TBX5, CFC1, GJA5
11	3	3	3	SYCP2, POT1, HIST1H2BD