Visceral hypersensitive rats share common dysbiosis features with irritable bowel syndrome patients

doi:10.3748/wjg.v22.i22.5211

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World Journal of Gastroenterology

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1007-9327

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World J Gastroenterol. Jun 14, 2016; 22(22): 5211-5227
Published online Jun 14, 2016. doi: 10.3748/wjg.v22.i22.5211

Table 3 Abundance of different taxa among groups by week 12 and correlations to visceral hypersensitivity

Taxonomy	LDA score (Log10)	Group	Across groups (n = 24)		Within group
Taxonomy	LDA score (Log10)	Group	r_all_sample	p_all_sample	r_ingroup	p_ingroup
Actinobacteria	2.338	Controln = 7	0.1835	0.3906	0.2041	0.6606
Actinobacteria\|Actinobacteria	2.338		0.1835	0.3906	0.2041	0.6606
Actinobacteria\|Actinobacteria\|Coriobacteriales\|Coriobacteriaceae\|Unclassified	2.192		0.2639	0.2127	0.2041	0.6606
Bacteroidetes\|Bacteroidia\|Bacteroidales\|Porphyromonadaceae	4.610		-0.1005	0.6405	0.1429	0.7825
Bacteroidetes\|Bacteroidia\|Bacteroidales\|Porphyromonadaceae\|Unclassified	4.543		-0.1344	0.5313	0.1429	0.7825
Fibrobacteres	2.435		-0.3601	0.0839	-0.0741	0.8745
Fibrobacteres\|Fibrobacteria	2.435		-0.3601	0.0839	-0.0741	0.8745
Fibrobacteres\|Fibrobacteria\|Fibrobacterales	2.435		-0.3601	0.0839	-0.0741	0.8745
Fibrobacteres\|Fibrobacteria\|Fibrobacterales\|Fibrobacteraceae	2.435		-0.3601	0.0839	-0.0741	0.8745
Fibrobacteres\|Fibrobacteria\|Fibrobacterales\|Fibrobacteraceae\|Fibrobacter	2.435		-0.3601	0.0839	-0.0741	0.8745
Firmicutes\|Bacilli\|Lactobacillales\|Streptococcaceae	2.710		0.1215	0.5717	0.4447	0.3174
Firmicutes\|Bacilli\|Lactobacillales\|Streptococcaceae\|Streptococcus	2.710		0.1215	0.5717	0.4447	0.3174
Firmicutes\|Erysipelotrichia\|Erysipelotrichales\|Erysipelotrichaceae\|Unclassified	3.097		-0.4944	0.0140¹	-0.1429	0.7825
Firmicutes\|Negativicutes\|Selenomonadales\|Unclassified	2.396		-0.2047	0.3374	0.7027	0.0782
Firmicutes\|Negativicutes\|Selenomonadales\|Unclassified\|Unclassified	2.396		-0.2047	0.3374	0.7027	0.0782
Fusobacteria	2.766	MSn = 10	0.4564	0.0250¹	0.2067	0.5667
Fusobacteria\|Fusobacteria	2.766		0.4564	0.0250¹	0.2067	0.5667
Fusobacteria\|Fusobacteria\|Fusobacteriales	2.766		0.4564	0.0250¹	0.2067	0.5667
Fusobacteria\|Fusobacteria\|Fusobacteriales\|Fusobacteriaceae	2.766		0.4564	0.0250¹	0.2067	0.5667
Fusobacteria\|Fusobacteria\|Fusobacteriales\|Fusobacteriaceae\|Fusobacterium	2.766		0.4564	0.0250¹	0.2067	0.5667
Proteobacteria\|Gammaproteobacteria	4.622		0.1809	0.3976	0.0667	0.8648
Proteobacteria\|Gammaproteobacteria\|Aeromonadales	4.622		0.1757	0.4115	0.0667	0.8648
Proteobacteria\|Gammaproteobacteria\|Aeromonadales\|Succinivibrionaceae	4.622		0.1757	0.4115	0.0667	0.8648
Proteobacteria\|Gammaproteobacteria\|Aeromonadales\|Succinivibrionaceae\|Anaerobiospirillum	4.622		0.1757	0.4115	0.0667	0.8648
Bacteroidetes\|Bacteroidia\|Bacteroidales\|Porphyromonadaceae\|Barnesiella	3.607	pTNBSn = 7	-0.1501	0.4840	-0.0180	0.9694
Firmicutes\|Clostridia\|Clostridiales\|Peptostreptococcaceae	3.776		0.1946	0.3623	0.0180	0.9694
Firmicutes\|Clostridia\|Clostridiales\|Peptostreptococcaceae\|Clostridium_XI	3.776		0.1946	0.3623	0.0180	0.9694
Firmicutes\|Clostridia\|Clostridiales\|Ruminococcaceae\|Unclassified	5.014		-0.0322	0.8813	-0.1982	0.6701

¹The P-value is less than 0.05. LDA: Linear discriminant analysis; MS: Maternal separation; pTNBS: TNBS post-inflammatory.

Citation: Zhou XY, Li M, Li X, Long X, Zuo XL, Hou XH, Cong YZ, Li YQ. Visceral hypersensitive rats share common dysbiosis features with irritable bowel syndrome patients. World J Gastroenterol 2016; 22(22): 5211-5227
URL: https://www.wjgnet.com/1007-9327/full/v22/i22/5211.htm
DOI: https://dx.doi.org/10.3748/wjg.v22.i22.5211