Brief Article
Copyright ©2012 Baishideng Publishing Group Co.
World J Gastroenterol. Mar 21, 2012; 18(11): 1235-1242
Published online Mar 21, 2012. doi: 10.3748/wjg.v18.i11.1235
Table 1 Primer sequences, restriction enzymes and fragment sizes for toll-like receptor 2 and toll-like receptor 4 gene polymorphisms and interleukin-1β gene
GenesPrimersEnzyme T°/timeFragment (bp)Ref.
TLR2F: 5’-CACGGAGGCAGCGAGAAA-3’-286[24]
del -196 to -174R: 5’-CTGGGCCGTGCAAAGAAG-3’ins/ins: 286
ins/del: 286, 264
del/del: 264
TLR4+896A/GF: 5’-AGCATACTTAGACTACCACCTCGATG 3’BstXI131[34]
rs4986790R: 5’-GTTGCCATCCGAAATTATAAGAAAAG 3’37 °C, 1 hA/A: 131
A/G: 131, 108
G/G: 108
TLR4+1196C/TF: 5’-GGTTGCTGTTCTCAAAGTGATTTTGGGAGAA-3’HinfI407[33]
rs4986791R: 5’-ACCTGAAGACTGGAGAGTGAGTTAAATGCT-3’37 °C, 1 hC/C: 407
C/T: 407, 378
T/T: 378
IL1-βF: CATGTGACCTGCTCGTCAGTHinfI370[47]
R: CCCTAGGGATTGAGTCCACA37 °C, 1 h195, 175
TLR2F: 5’-CACGGAGGCAGCGAGAAA-3’BstXI286[24]
R: 5’-CTGGGCCGTGCAAAGAAG-3’37 °C, 1 h188, 98