Time-series gene expression profiles in AGS cells stimulated with Helicobacter pylori

Figure 3 STEM clustering of all the 3577 differentially expressed genes labeled by accession number. All profiles were ordered based on the P value significance of the number of genes assigned vs expected. A: Profile 111 (0, 0, 0, -1, 1): 28.0 genes assigned, 4.2 genes expected, P-value = 1.2E-14 (significant); B: Profile 71 (0, -1, 0, 2, 2): 123.0 genes assigned, 19.0 genes expected, P-value = 4.4E-58 (significant); C: Profile 108 (0, 0, 0, -2, -3): 57.0 genes assigned, 16.2 genes expected, P-value = 1.5E-15 (significant); D: Profile 83 (0, -1, 1, 1, 3): 17.0 genes assigned, 2.7 genes expected, P-value = 4.3E-9 (significant).