Replication of interleukin 23 receptor and autophagy-related 16-like 1 association in adult- and pediatric-onset inflammatory bowel disease in Italy

Table 4 Transmission disequilibrium test (TDT) for rs7517847 and rs11209026 IL23R SNPs for IBD, CD, and UC

Marker	Over-trans	Haplotype	IBD (n = 273)			CD (n = 138)			UC (n = 135)
			T	U	P	T	U	P	T	U	P
rs7517847	T		137	101	0.0196	74	40	0.0015	63	61	0.8575
rs11209026	G		34	19	0.0394	18	9	0.0833	16	10	0.2393
		TG	141	100	0.0084	52	60	0.0012	45	34	0.5947
		GG	97	123	0.0790	50	39	0.0098	28	28	0.9940
		GA	14	24	0.1088	12	20	0.0585	9	13	0.6555
		TA	5	10	0.1831	13	8	0.7037	-	-	-
rs2241880	G		-	-	-	90	62	0.0231	-	-	-

TDT haplotypes are also included. Data of over-transmitted allele are given, with counts of transmitted (T) and un-transmitted (U) alleles.