Detection and identification of intestinal pathogenic bacteria by hybridization to oligonucleotide microarrays

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Dec 28, 2005; 11(48): 7615-7619
Published online Dec 28, 2005. doi: 10.3748/wjg.v11.i48.7615

Table 3 Comparison of identifications based on hybridization assay and conventional methods for 26 cultures

No.	Hybridization assay	Conventional methods	Consistency
1	Staphylococcus aureus	Staphylococcus aureus	Y¹
2	Coagulase-negative Staphylococcus	Staphylococcus epidermidis	Y
3	Staphylococcus aureus	Staphylococcus aureus	Y
4	Staphylococcus aureus	Staphylococcus aureus	Y
5	Staphylococcus aureus	Staphylococcus aureus	Y
6	Pseudomonas aeruginosa	Pseudomonas aeruginosa	Y
7	-³	Salmonella typhimurium	-²
8	Escherichia coli	Escherichia coli	Y
9	Staphylococcus aureus	Staphylococcus aureus	Y
10	Pseudomonas aeruginosa	Pseudomonas aeruginosa	Y
11	Shigella sp.	Shigella flexneri	Y
12	Shigella sp.	Shigella flexneri	Y
13	Shigella sp.	Shigella flexneri	Y
14	Shigella sp.	Shigella flexneri	Y
15	Vibrio parahaemolyticus	Vibrio parahaemolyticus	Y
16	Yersinia enterocolitica	Yersinia enterocolitica	Y
17	Pseudomonas aeruginosa	Pseudomonas aeruginosa	Y
18	Shigella sp.	Shigella flexneri	Y
19	Shigella sp.	Shigella flexneri	Y
20	Vibrio parahaemolyticus	Vibrio parahaemolyticus	Y
21	Escherichia coli	Escherichia coli	Y
22	Escherichia coli	Escherichia coli	Y
23	Salmonella sp.	Salmonella typhimurium	Y
24	Campylobacter jejuni	Campylobacter jejuni	Y
25	Salmonella sp.	Salmonella typhimurium	Y
26	Salmonella sp.	Salmonella typhimurium	Y

¹The results from hybridization assay and conventional methods are consistent.

²The results are inconsistent.

³No signal was detected.

Citation: Jin LQ, Li JW, Wang SQ, Chao FH, Wang XW, Yuan ZQ. Detection and identification of intestinal pathogenic bacteria by hybridization to oligonucleotide microarrays. World J Gastroenterol 2005; 11(48): 7615-7619
URL: https://www.wjgnet.com/1007-9327/full/v11/i48/7615.htm
DOI: https://dx.doi.org/10.3748/wjg.v11.i48.7615

Jin LQ, Li JW, Wang SQ, Chao FH, Wang XW, Yuan ZQ. Detection and identification of intestinal pathogenic bacteria by hybridization to oligonucleotide microarrays. World J Gastroenterol 2005; 11(48): 7615-7619 [PMID: 16437687 DOI: 10.3748/wjg.v11.i48.7615]

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