Copyright
©The Author(s) 2025.
World J Exp Med. Jun 20, 2025; 15(2): 100443
Published online Jun 20, 2025. doi: 10.5493/wjem.v15.i2.100443
Published online Jun 20, 2025. doi: 10.5493/wjem.v15.i2.100443
Table 4 Candidate gene fusions detected in RNA sequencing data of OCUG-2 cells
| Gene fusion | Breakpoint1 | Breakpoint2 | Confidence | Reading frame |
| LEPROT: LEPR | chr1:65425378 | chr1:65565546 | High | Out-of-frame |
| LEPROT: LEPR | chr1:65430048 | chr1:65565546 | Medium | Out-of-frame |
| TSPAN14: AL392185.1 | chr10:80504778 | chr9:95602159 | High | Out-of-frame |
| TSPAN14: AL392185.1 | chr10:80489314 | chr9:95602159 | High | Out-of-frame |
| TSPAN14: AL392185.1 | chr10:80506862 | chr9:95602874 | Medium | |
| TSPAN14: AL392185.1 | chr10:80504778 | chr9:95600165 | Medium | Out-of-frame |
| RNF115: ITGA10 | chr1:145823772 | chr1:145907465 | High | Out-of-frame |
| PCDHA3: PCDHAC2 | chr5:140803591 | chr5:140978949 | High | In-frame |
| AC092807.3: DDAH1 | chr1:85496166 | chr1:85358847 | High | |
| AC092807.3: DDAH1 | chr1:85494729 | chr1:85358847 | Medium | |
| AC092807.3: DDAH1 | chr1:85577984 | chr1:85358847 | Medium | |
| ERC1: PDE3A | chr12:1141787 | chr12:20556660 | High | In-frame |
| TVP23C: CDRT4 | chr17:15540433 | chr17:15440285 | High | Out-of-frame |
| PRR16: AC114284.1 | chr5:120464645 | chr5:120789954 | High | Out-of-frame |
| PCDHGB2: PCDHGA8 | chr5:141362556 | chr5:141494807 | Medium | In-frame |
| MYO9A: PKM | chr15:72117680 | chr15:72219110 | Medium | |
| RASSF8: SSPN | chr12:26055446 | chr12:26224293 | Medium | Out-of-frame |
| RASSF8: SSPN | chr12:26055446 | chr12:26179996 | Medium | Out-of-frame |
| AC104123.1: CAST | chr5:96379652 | chr5:96675539 | Medium | |
| MGST1: AC007529.2 | chr12:16383604 | chr12:16661766 | Medium | |
| LDLRAD3: PRR5L | chr11:36098461 | chr11:36296290 | Medium | Out-of-frame |
- Citation: Wang Q, Fan C, Tsujio G, Sakuma T, Maruo K, Yamamoto Y, Imanishi D, Kawabata K, Nishikubo H, Kanei S, Aoyama R, Kushiyama S, Ohira M, Yashiro M. Establishment and characterization of a new human gallbladder cancer cell line, OCUG-2. World J Exp Med 2025; 15(2): 100443
- URL: https://www.wjgnet.com/2220-315x/full/v15/i2/100443.htm
- DOI: https://dx.doi.org/10.5493/wjem.v15.i2.100443