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For: Jachiet PA, Colson P, Lopez P, Bapteste E. Extensive gene remodeling in the viral world: new evidence for nongradual evolution in the mobilome network. Genome Biol Evol 2014;6:2195-205. [PMID: 25104113 DOI: 10.1093/gbe/evu168] [Cited by in Crossref: 19] [Cited by in F6Publishing: 12] [Article Influence: 2.4] [Reference Citation Analysis]
Number Citing Articles
1 Watson AK, Lannes R, Pathmanathan JS, Méheust R, Karkar S, Colson P, Corel E, Lopez P, Bapteste E. The Methodology Behind Network Thinking: Graphs to Analyze Microbial Complexity and Evolution. In: Anisimova M, editor. Evolutionary Genomics. New York: Springer; 2019. pp. 271-308. [DOI: 10.1007/978-1-4939-9074-0_9] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.3] [Reference Citation Analysis]
2 Pathmanathan JS, Lopez P, Lapointe FJ, Bapteste E. CompositeSearch: A Generalized Network Approach for Composite Gene Families Detection. Mol Biol Evol 2018;35:252-5. [PMID: 29092069 DOI: 10.1093/molbev/msx283] [Cited by in Crossref: 14] [Cited by in F6Publishing: 12] [Article Influence: 4.7] [Reference Citation Analysis]
3 Ou Y, McInerney JO. Eukaryote Genes Are More Likely than Prokaryote Genes to Be Composites. Genes (Basel) 2019;10:E648. [PMID: 31466252 DOI: 10.3390/genes10090648] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
4 Corel E, Méheust R, Watson AK, McInerney JO, Lopez P, Bapteste E. Bipartite Network Analysis of Gene Sharings in the Microbial World. Mol Biol Evol 2018;35:899-913. [PMID: 29346651 DOI: 10.1093/molbev/msy001] [Cited by in Crossref: 22] [Cited by in F6Publishing: 16] [Article Influence: 7.3] [Reference Citation Analysis]
5 Corel E, Lopez P, Méheust R, Bapteste E. Network-Thinking: Graphs to Analyze Microbial Complexity and Evolution. Trends Microbiol 2016;24:224-37. [PMID: 26774999 DOI: 10.1016/j.tim.2015.12.003] [Cited by in Crossref: 71] [Cited by in F6Publishing: 56] [Article Influence: 11.8] [Reference Citation Analysis]
6 Kerepesi C, Grolmusz V. The "Giant Virus Finder" discovers an abundance of giant viruses in the Antarctic dry valleys. Arch Virol 2017;162:1671-6. [PMID: 28247094 DOI: 10.1007/s00705-017-3286-4] [Cited by in Crossref: 19] [Cited by in F6Publishing: 14] [Article Influence: 3.8] [Reference Citation Analysis]
7 Hatzopoulos T, Watkins SC, Putonti C. PhagePhisher: a pipeline for the discovery of covert viral sequences in complex genomic datasets. Microb Genom 2016;2:e000053. [PMID: 28348848 DOI: 10.1099/mgen.0.000053] [Cited by in Crossref: 4] [Cited by in F6Publishing: 5] [Article Influence: 0.7] [Reference Citation Analysis]
8 Krupovic M, Makarova KS, Wolf YI, Medvedeva S, Prangishvili D, Forterre P, Koonin EV. Integrated mobile genetic elements in Thaumarchaeota. Environ Microbiol 2019;21:2056-78. [PMID: 30773816 DOI: 10.1111/1462-2920.14564] [Cited by in Crossref: 19] [Cited by in F6Publishing: 15] [Article Influence: 6.3] [Reference Citation Analysis]
9 Iranzo J, Krupovic M, Koonin EV. The Double-Stranded DNA Virosphere as a Modular Hierarchical Network of Gene Sharing. mBio 2016;7:e00978-16. [PMID: 27486193 DOI: 10.1128/mBio.00978-16] [Cited by in Crossref: 108] [Cited by in F6Publishing: 60] [Article Influence: 18.0] [Reference Citation Analysis]
10 Cheng S, Karkar S, Bapteste E, Yee N, Falkowski P, Bhattacharya D. Sequence similarity network reveals the imprints of major diversification events in the evolution of microbial life. Front Ecol Evol 2014;2. [DOI: 10.3389/fevo.2014.00072] [Cited by in Crossref: 15] [Cited by in F6Publishing: 6] [Article Influence: 1.9] [Reference Citation Analysis]
11 Watson AK, Lopez P, Bapteste E. Hundreds of out-of-frame remodelled gene families in the E. coli pangenome. Mol Biol Evol 2021:msab329. [PMID: 34792602 DOI: 10.1093/molbev/msab329] [Reference Citation Analysis]
12 Méheust R, Zelzion E, Bhattacharya D, Lopez P, Bapteste E. Protein networks identify novel symbiogenetic genes resulting from plastid endosymbiosis. Proc Natl Acad Sci U S A 2016;113:3579-84. [PMID: 26976593 DOI: 10.1073/pnas.1517551113] [Cited by in Crossref: 40] [Cited by in F6Publishing: 32] [Article Influence: 6.7] [Reference Citation Analysis]
13 Shapiro JA. Living Organisms Author Their Read-Write Genomes in Evolution. Biology (Basel) 2017;6:E42. [PMID: 29211049 DOI: 10.3390/biology6040042] [Cited by in Crossref: 30] [Cited by in F6Publishing: 20] [Article Influence: 6.0] [Reference Citation Analysis]