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For: Smith LM, Agar JN, Chamot-Rooke J, Danis PO, Ge Y, Loo JA, Paša-Tolić L, Tsybin YO, Kelleher NL; Consortium for Top-Down Proteomics. The Human Proteoform Project: Defining the human proteome. Sci Adv 2021;7:eabk0734. [PMID: 34767442 DOI: 10.1126/sciadv.abk0734] [Cited by in Crossref: 32] [Cited by in F6Publishing: 30] [Article Influence: 32.0] [Reference Citation Analysis]
Number Citing Articles
1 Zhang Y, Cai Q, Luo Y, Zhang Y, Li H. Integrated top-down and bottom-up proteomics mass spectrometry for the characterization of endogenous ribosomal protein heterogeneity. Journal of Pharmaceutical Analysis 2022. [DOI: 10.1016/j.jpha.2022.11.003] [Reference Citation Analysis]
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3 Carper DL, Appidi MR, Mudbhari S, Shrestha HK, Hettich RL, Abraham PE. The Promises, Challenges, and Opportunities of Omics for Studying the Plant Holobiont. Microorganisms 2022;10:2013. [DOI: 10.3390/microorganisms10102013] [Reference Citation Analysis]
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6 Brown SL, Zenaidee MA, Loo JA, Loo RRO, Donald WA. On the Mechanism of Theta Capillary Nanoelectrospray Ionization for the Formation of Highly Charged Protein Ions Directly from Native Solutions. Anal Chem . [DOI: 10.1021/acs.analchem.2c01654] [Reference Citation Analysis]
7 Shahinuzzaman ADA, Kamal AHM, Chakrabarty JK, Rahman A, Chowdhury SM. Identification of Inflammatory Proteomics Networks of Toll-like Receptor 4 through Immunoprecipitation-Based Chemical Cross-Linking Proteomics. Proteomes 2022;10:31. [DOI: 10.3390/proteomes10030031] [Reference Citation Analysis]
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9 Seydel C. Diving deeper into the proteome. Nat Methods 2022. [PMID: 36008631 DOI: 10.1038/s41592-022-01599-9] [Reference Citation Analysis]
10 de Crécy-lagard V, Amorin de Hegedus R, Arighi C, Babor J, Bateman A, Blaby I, Blaby-haas C, Bridge AJ, Burley SK, Cleveland S, Colwell LJ, Conesa A, Dallago C, Danchin A, de Waard A, Deutschbauer A, Dias R, Ding Y, Fang G, Friedberg I, Gerlt J, Goldford J, Gorelik M, Gyori BM, Henry C, Hutinet G, Jaroch M, Karp PD, Kondratova L, Lu Z, Marchler-bauer A, Martin M, Mcwhite C, Moghe GD, Monaghan P, Morgat A, Mungall CJ, Natale DA, Nelson WC, O’donoghue S, Orengo C, O’toole KH, Radivojac P, Reed C, Roberts RJ, Rodionov D, Rodionova IA, Rudolf JD, Saleh L, Sheynkman G, Thibaud-nissen F, Thomas PD, Uetz P, Vallenet D, Carter EW, Weigele PR, Wood V, Wood-charlson EM, Xu J. A roadmap for the functional annotation of protein families: a community perspective. Database 2022;2022. [DOI: 10.1093/database/baac062] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
11 Karlsson M, Álvez MB, Shi M, Méar L, Schutten R, Hikmet F, Digre A, Katona B, Vuu J, Bosic M, Sjöstedt E, Edfors F, Oksvold P, von Feilitzen K, Zwahlen M, Forsberg M, Johansson F, Mulder J, Hökfelt T, Luo Y, Butler L, Zhong W, Mardinoglu A, Sivertsson Å, Ponten F, Zhang C, Lindskog C, Fagerberg L, Uhlén M. Genome-wide single cell annotation of the human protein-coding genes.. [DOI: 10.1101/2022.08.03.502627] [Reference Citation Analysis]
12 Becker T, Wiest A, Telek A, Bejko D, Hoffmann-röder A, Kielkowski P. Transforming Chemical Proteomics Enrichment into a High-Throughput Method Using an SP2E Workflow. JACS Au 2022;2:1712-1723. [DOI: 10.1021/jacsau.2c00284] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
13 Yang M, Hu H, Su P, Thomas PM, Camarillo JM, Greer JB, Early BP, Fellers RT, Kelleher NL, Laskin J. Proteoform-Selective Imaging of Tissues Using Mass Spectrometry. Angew Chem Int Ed Engl 2022;61:e202200721. [PMID: 35446460 DOI: 10.1002/anie.202200721] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
14 Walker KA, Basisty N, Wilson DM 3rd, Ferrucci L. Connecting aging biology and inflammation in the omics era. J Clin Invest 2022;132:e158448. [PMID: 35838044 DOI: 10.1172/JCI158448] [Cited by in Crossref: 2] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
15 Mann G, Sadhu P, Brik A. Synthetic Proteins behind the Plasma Barrier: Molecular Spies. Acc Chem Res 2022. [PMID: 35833291 DOI: 10.1021/acs.accounts.2c00236] [Reference Citation Analysis]
16 Kurzawa N, Stahl M, Leo I, Kunold E, Becher I, Audrey A, Mermelekas G, Huber W, Mateus A, Savitski MM, Jafari R. Deep thermal proteome profiling for detection of proteoforms and drug sensitivity biomarkers.. [DOI: 10.1101/2022.06.10.495491] [Reference Citation Analysis]
17 Burnum-Johnson KE, Conrads TP, Drake RR, Herr AE, Iyengar R, Kelly RT, Lundberg E, MacCoss MJ, Naba A, Nolan GP, Pevzner PA, Rodland KD, Sechi S, Slavov N, Spraggins JM, Van Eyk JE, Vidal M, Vogel C, Walt DR, Kelleher NL. New views of old proteins: clarifying the enigmatic proteome. Mol Cell Proteomics 2022;:100254. [PMID: 35654359 DOI: 10.1016/j.mcpro.2022.100254] [Reference Citation Analysis]
18 Liu FC, Ridgeway ME, Park MA, Bleiholder C. Tandem-trapped ion mobility spectrometry/mass spectrometry (tTIMS/MS): a promising analytical method for investigating heterogenous samples. Analyst 2022;147:2317-37. [PMID: 35521797 DOI: 10.1039/d2an00335j] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
19 Mehlferber MM, Jordan BT, Jeffery ED, Sheynkman L, Saquing J, Acharya BR, Hirschi KK, Sheynkman GM. Characterization of protein isoform diversity in human umbilical vein endothelial cells (HUVECs) via long-read proteogenomics.. [DOI: 10.1101/2022.05.17.490813] [Reference Citation Analysis]
20 Drown BS, Jooß K, Melani RD, Lloyd-Jones C, Camarillo JM, Kelleher NL. Mapping the Proteoform Landscape of Five Human Tissues. J Proteome Res 2022. [PMID: 35413190 DOI: 10.1021/acs.jproteome.2c00034] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
21 Tan LY, Tang KH, Lim LYY, Ong JX, Park H, Jung S. α-Synuclein at the Presynaptic Axon Terminal as a Double-Edged Sword. Biomolecules 2022;12:507. [DOI: 10.3390/biom12040507] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
22 Plubell DL, Käll L, Webb-robertson B, Bramer LM, Ives A, Kelleher NL, Smith LM, Montine TJ, Wu CC, Maccoss MJ. Putting Humpty Dumpty Back Together Again: What Does Protein Quantification Mean in Bottom-Up Proteomics? J Proteome Res . [DOI: 10.1021/acs.jproteome.1c00894] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 2.0] [Reference Citation Analysis]
23 Wang S, Lv X, Zhang J, Chen D, Chen S, Fan G, Ma C, Wang Y. Roles of E3 Ubiquitin Ligases in Plant Responses to Abiotic Stresses. Int J Mol Sci 2022;23:2308. [PMID: 35216424 DOI: 10.3390/ijms23042308] [Cited by in Crossref: 3] [Cited by in F6Publishing: 5] [Article Influence: 3.0] [Reference Citation Analysis]
24 Melani RD, Gerbasi VR, Anderson LC, Sikora JW, Toby TK, Hutton JE, Butcher DS, Negrão F, Seckler HS, Srzentić K, Fornelli L, Camarillo JM, LeDuc RD, Cesnik AJ, Lundberg E, Greer JB, Fellers RT, Robey MT, DeHart CJ, Forte E, Hendrickson CL, Abbatiello SE, Thomas PM, Kokaji AI, Levitsky J, Kelleher NL. The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells. Science 2022;375:411-8. [PMID: 35084980 DOI: 10.1126/science.aaz5284] [Cited by in Crossref: 17] [Cited by in F6Publishing: 16] [Article Influence: 17.0] [Reference Citation Analysis]
25 Becker T, Wiest A, Telek A, Bejko D, Hoffmann-röder A, Kielkowski P. Transforming chemical proteomics enrichment into high-throughput method using SP2E workflow.. [DOI: 10.1101/2022.01.24.477214] [Reference Citation Analysis]
26 Hornburg D, Ferdosi S, Hasan M, Tangeysh B, Brown TR, Wang T, Elgierari EM, Zhao X, Alavi A, Chu J, Figa M, Tao W, Wang J, Goldberg M, Xia H, Stolarczyk C, Batzoglou S, Siddiqui A, Farokhzad OC. Enhanced competitive protein exchange at the nano-bio interface enables ultra-deep coverage of the human plasma proteome.. [DOI: 10.1101/2022.01.08.475439] [Reference Citation Analysis]
27 Hollas MAR, Robey MT, Fellers RT, LeDuc RD, Thomas PM, Kelleher NL. The Human Proteoform Atlas: a FAIR community resource for experimentally derived proteoforms. Nucleic Acids Res 2022;50:D526-33. [PMID: 34986596 DOI: 10.1093/nar/gkab1086] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 5.0] [Reference Citation Analysis]
28 Ball LE, Agana BA, Comte-walters S, Bethard JR, Burnette BB. An Introduction to Mass Spectrometry-Based Proteomics. Reference Module in Life Sciences 2022. [DOI: 10.1016/b978-0-12-821618-7.00143-7] [Reference Citation Analysis]
29 Smith LM. Proteoforms and Proteoform Families: Past, Present, and Future. Proteoform Identification 2022. [DOI: 10.1007/978-1-0716-2325-1_1] [Reference Citation Analysis]
30 Liu Y. A peptidoform based proteomic strategy for studying functions of post-translational modifications. Proteomics 2021;:e2100316. [PMID: 34878717 DOI: 10.1002/pmic.202100316] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]