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For: Hiller NL, Ahmed A, Powell E, Martin DP, Eutsey R, Earl J, Janto B, Boissy RJ, Hogg J, Barbadora K, Sampath R, Lonergan S, Post JC, Hu FZ, Ehrlich GD. Generation of genic diversity among Streptococcus pneumoniae strains via horizontal gene transfer during a chronic polyclonal pediatric infection. PLoS Pathog 2010;6:e1001108. [PMID: 20862314 DOI: 10.1371/journal.ppat.1001108] [Cited by in Crossref: 99] [Cited by in F6Publishing: 101] [Article Influence: 8.3] [Reference Citation Analysis]
Number Citing Articles
1 Hiller NL, Eutsey RA, Powell E, Earl JP, Janto B, Martin DP, Dawid S, Ahmed A, Longwell MJ, Dahlgren ME, Ezzo S, Tettelin H, Daugherty SC, Mitchell TJ, Hillman TA, Buchinsky FJ, Tomasz A, de Lencastre H, Sá-Leão R, Post JC, Hu FZ, Ehrlich GD. Differences in genotype and virulence among four multidrug-resistant Streptococcus pneumoniae isolates belonging to the PMEN1 clone. PLoS One 2011;6:e28850. [PMID: 22205975 DOI: 10.1371/journal.pone.0028850] [Cited by in Crossref: 19] [Cited by in F6Publishing: 17] [Article Influence: 1.7] [Reference Citation Analysis]
2 Lin J, Lau GW. DprA-Dependent Exit from the Competent State Regulates Multifaceted Streptococcus pneumoniae Virulence. Infect Immun 2019;87:e00349-19. [PMID: 31451619 DOI: 10.1128/IAI.00349-19] [Cited by in Crossref: 6] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
3 Pinchas MD, LaCross NC, Dawid S. An electrostatic interaction between BlpC and BlpH dictates pheromone specificity in the control of bacteriocin production and immunity in Streptococcus pneumoniae. J Bacteriol 2015;197:1236-48. [PMID: 25622617 DOI: 10.1128/JB.02432-14] [Cited by in Crossref: 13] [Cited by in F6Publishing: 11] [Article Influence: 1.9] [Reference Citation Analysis]
4 Chewapreecha C, Harris SR, Croucher NJ, Turner C, Marttinen P, Cheng L, Pessia A, Aanensen DM, Mather AE, Page AJ, Salter SJ, Harris D, Nosten F, Goldblatt D, Corander J, Parkhill J, Turner P, Bentley SD. Dense genomic sampling identifies highways of pneumococcal recombination. Nat Genet 2014;46:305-9. [PMID: 24509479 DOI: 10.1038/ng.2895] [Cited by in Crossref: 282] [Cited by in F6Publishing: 227] [Article Influence: 35.3] [Reference Citation Analysis]
5 Valente C, Dawid S, Pinto FR, Hinds J, Simões AS, Gould KA, Mendes LA, de Lencastre H, Sá-Leão R. The blp Locus of Streptococcus pneumoniae Plays a Limited Role in the Selection of Strains That Can Cocolonize the Human Nasopharynx. Appl Environ Microbiol 2016;82:5206-15. [PMID: 27316956 DOI: 10.1128/AEM.01048-16] [Cited by in Crossref: 7] [Cited by in F6Publishing: 4] [Article Influence: 1.2] [Reference Citation Analysis]
6 Golubchik T, Brueggemann AB, Street T, Gertz RE Jr, Spencer CC, Ho T, Giannoulatou E, Link-Gelles R, Harding RM, Beall B, Peto TE, Moore MR, Donnelly P, Crook DW, Bowden R. Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event. Nat Genet 2012;44:352-5. [PMID: 22286217 DOI: 10.1038/ng.1072] [Cited by in Crossref: 76] [Cited by in F6Publishing: 72] [Article Influence: 7.6] [Reference Citation Analysis]
7 Donkor ES, Annan JA, Badoe EV, Dayie NT, Labi AK, Slotved HC. Pneumococcal carriage among HIV infected children in Accra, Ghana. BMC Infect Dis 2017;17:133. [PMID: 28178935 DOI: 10.1186/s12879-017-2224-0] [Cited by in Crossref: 10] [Cited by in F6Publishing: 9] [Article Influence: 2.0] [Reference Citation Analysis]
8 Laurenceau R, Krasteva PV, Diallo A, Ouarti S, Duchateau M, Malosse C, Chamot-Rooke J, Fronzes R. Conserved Streptococcus pneumoniae spirosomes suggest a single type of transformation pilus in competence. PLoS Pathog 2015;11:e1004835. [PMID: 25876066 DOI: 10.1371/journal.ppat.1004835] [Cited by in Crossref: 21] [Cited by in F6Publishing: 19] [Article Influence: 3.0] [Reference Citation Analysis]
9 Prudhomme M, Berge M, Martin B, Polard P. Pneumococcal Competence Coordination Relies on a Cell-Contact Sensing Mechanism. PLoS Genet 2016;12:e1006113. [PMID: 27355362 DOI: 10.1371/journal.pgen.1006113] [Cited by in Crossref: 25] [Cited by in F6Publishing: 18] [Article Influence: 4.2] [Reference Citation Analysis]
10 Nasher F, Aguilar F, Aebi S, Hermans PWM, Heller M, Hathaway LJ. Peptide Ligands of AmiA, AliA, and AliB Proteins Determine Pneumococcal Phenotype. Front Microbiol 2018;9:3013. [PMID: 30568648 DOI: 10.3389/fmicb.2018.03013] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.8] [Reference Citation Analysis]
11 Mostowy R, Croucher NJ, Hanage WP, Harris SR, Bentley S, Fraser C. Heterogeneity in the frequency and characteristics of homologous recombination in pneumococcal evolution. PLoS Genet 2014;10:e1004300. [PMID: 24786281 DOI: 10.1371/journal.pgen.1004300] [Cited by in Crossref: 55] [Cited by in F6Publishing: 50] [Article Influence: 6.9] [Reference Citation Analysis]
12 Rieger M, Mauch H, Hakenbeck R. Long Persistence of a Streptococcus pneumoniae 23F Clone in a Cystic Fibrosis Patient. mSphere 2017;2:e00201-17. [PMID: 28596991 DOI: 10.1128/mSphere.00201-17] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.2] [Reference Citation Analysis]
13 Kim L, McGee L, Tomczyk S, Beall B. Biological and Epidemiological Features of Antibiotic-Resistant Streptococcus pneumoniae in Pre- and Post-Conjugate Vaccine Eras: a United States Perspective. Clin Microbiol Rev 2016;29:525-52. [PMID: 27076637 DOI: 10.1128/CMR.00058-15] [Cited by in Crossref: 136] [Cited by in F6Publishing: 69] [Article Influence: 22.7] [Reference Citation Analysis]
14 Sanguinetti L, Toti S, Reguzzi V, Bagnoli F, Donati C. A novel computational method identifies intra- and inter-species recombination events in Staphylococcus aureus and Streptococcus pneumoniae. PLoS Comput Biol 2012;8:e1002668. [PMID: 22969418 DOI: 10.1371/journal.pcbi.1002668] [Cited by in Crossref: 7] [Cited by in F6Publishing: 7] [Article Influence: 0.7] [Reference Citation Analysis]
15 Hiller NL, Sá-Leão R. Puzzling Over the Pneumococcal Pangenome. Front Microbiol 2018;9:2580. [PMID: 30425695 DOI: 10.3389/fmicb.2018.02580] [Cited by in Crossref: 13] [Cited by in F6Publishing: 10] [Article Influence: 3.3] [Reference Citation Analysis]
16 Eutsey RA, Hiller NL, Earl JP, Janto BA, Dahlgren ME, Ahmed A, Powell E, Schultz MP, Gilsdorf JR, Zhang L, Smith A, Murphy TF, Sethi S, Shen K, Post JC, Hu FZ, Ehrlich GD. Design and validation of a supragenome array for determination of the genomic content of Haemophilus influenzae isolates. BMC Genomics 2013;14:484. [PMID: 23865594 DOI: 10.1186/1471-2164-14-484] [Cited by in Crossref: 13] [Cited by in F6Publishing: 12] [Article Influence: 1.4] [Reference Citation Analysis]
17 Nozawa T, Furukawa N, Aikawa C, Watanabe T, Haobam B, Kurokawa K, Maruyama F, Nakagawa I. CRISPR inhibition of prophage acquisition in Streptococcus pyogenes. PLoS One 2011;6:e19543. [PMID: 21573110 DOI: 10.1371/journal.pone.0019543] [Cited by in Crossref: 77] [Cited by in F6Publishing: 61] [Article Influence: 7.0] [Reference Citation Analysis]
18 Manna S, Spry L, Wee-hee A, Ortika BD, Boelsen LK, Batinovic S, Mazarakis N, Ford RL, Lo SW, Bentley SD, Russelll FM, Blyth CC, Pomat WS, Petrovski S, Hinds J, Licciardi PV, Satzke C, Larock CN. Variants of Streptococcus pneumoniae Serotype 14 from Papua New Guinea with the Potential to Be Mistyped and Escape Vaccine-Induced Protection. Microbiol Spectr. [DOI: 10.1128/spectrum.01524-22] [Reference Citation Analysis]
19 Shak JR, Vidal JE, Klugman KP. Influence of bacterial interactions on pneumococcal colonization of the nasopharynx. Trends Microbiol 2013;21:129-35. [PMID: 23273566 DOI: 10.1016/j.tim.2012.11.005] [Cited by in Crossref: 85] [Cited by in F6Publishing: 77] [Article Influence: 8.5] [Reference Citation Analysis]
20 Brooks LRK, Mias GI. Streptococcus pneumoniae's Virulence and Host Immunity: Aging, Diagnostics, and Prevention. Front Immunol 2018;9:1366. [PMID: 29988379 DOI: 10.3389/fimmu.2018.01366] [Cited by in Crossref: 65] [Cited by in F6Publishing: 52] [Article Influence: 16.3] [Reference Citation Analysis]
21 Sauerbier J, Maurer P, Rieger M, Hakenbeck R. Streptococcus pneumoniae R6 interspecies transformation: genetic analysis of penicillin resistance determinants and genome-wide recombination events. Mol Microbiol 2012;86:692-706. [PMID: 22931193 DOI: 10.1111/mmi.12009] [Cited by in Crossref: 38] [Cited by in F6Publishing: 35] [Article Influence: 3.8] [Reference Citation Analysis]
22 Hu FZ, Król JE, Tsai CHS, Eutsey RA, Hiller LN, Sen B, Ahmed A, Hillman T, Buchinsky FJ, Nistico L, Dice B, Longwell M, Horsey E, Ehrlich GD. Deletion of genes involved in the ketogluconate metabolism, Entner-Doudoroff pathway, and glucose dehydrogenase increase local and invasive virulence phenotypes in Streptococcus pneumoniae. PLoS One 2019;14:e0209688. [PMID: 30620734 DOI: 10.1371/journal.pone.0209688] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.0] [Reference Citation Analysis]
23 Motro Y, Moran-Gilad J. Next-generation sequencing applications in clinical bacteriology. Biomol Detect Quantif 2017;14:1-6. [PMID: 29255684 DOI: 10.1016/j.bdq.2017.10.002] [Cited by in Crossref: 34] [Cited by in F6Publishing: 26] [Article Influence: 6.8] [Reference Citation Analysis]
24 Eutsey RA, Powell E, Dordel J, Salter SJ, Clark TA, Korlach J, Ehrlich GD, Hiller NL. Genetic Stabilization of the Drug-Resistant PMEN1 Pneumococcus Lineage by Its Distinctive DpnIII Restriction-Modification System. mBio 2015;6:e00173. [PMID: 26081630 DOI: 10.1128/mBio.00173-15] [Cited by in Crossref: 18] [Cited by in F6Publishing: 10] [Article Influence: 2.6] [Reference Citation Analysis]
25 Hammond JA, Gordon EA, Socarras KM, Chang Mell J, Ehrlich GD. Beyond the pan-genome: current perspectives on the functional and practical outcomes of the distributed genome hypothesis. Biochem Soc Trans 2020;48:2437-55. [PMID: 33245329 DOI: 10.1042/BST20190713] [Reference Citation Analysis]
26 Enright MC, Spratt BG. Genomics. The genomic view of bacterial diversification. Science 2011;331:407-9. [PMID: 21273474 DOI: 10.1126/science.1201690] [Cited by in Crossref: 4] [Cited by in F6Publishing: 6] [Article Influence: 0.4] [Reference Citation Analysis]
27 Croucher NJ, Harris SR, Barquist L, Parkhill J, Bentley SD. A high-resolution view of genome-wide pneumococcal transformation. PLoS Pathog 2012;8:e1002745. [PMID: 22719250 DOI: 10.1371/journal.ppat.1002745] [Cited by in Crossref: 76] [Cited by in F6Publishing: 63] [Article Influence: 7.6] [Reference Citation Analysis]
28 David S, Sánchez-Busó L, Harris SR, Marttinen P, Rusniok C, Buchrieser C, Harrison TG, Parkhill J. Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila. PLoS Genet 2017;13:e1006855. [PMID: 28650958 DOI: 10.1371/journal.pgen.1006855] [Cited by in Crossref: 20] [Cited by in F6Publishing: 17] [Article Influence: 4.0] [Reference Citation Analysis]
29 Innamorati KA, Earl JP, Aggarwal SD, Ehrlich GD, Hiller NL. The Bacterial Guide to Designing a Diversified Gene Portfolio. In: Tettelin H, Medini D, editors. The Pangenome. Cham: Springer International Publishing; 2020. pp. 51-87. [DOI: 10.1007/978-3-030-38281-0_3] [Cited by in Crossref: 1] [Article Influence: 0.5] [Reference Citation Analysis]
30 Valente C, Hinds J, Gould KA, Pinto FR, de Lencastre H, Sá-Leão R. Impact of the 13-valent pneumococcal conjugate vaccine on Streptococcus pneumoniae multiple serotype carriage. Vaccine 2016;34:4072-8. [PMID: 27325351 DOI: 10.1016/j.vaccine.2016.06.017] [Cited by in Crossref: 13] [Cited by in F6Publishing: 12] [Article Influence: 2.2] [Reference Citation Analysis]
31 Charpentier X, Polard P, Claverys JP. Induction of competence for genetic transformation by antibiotics: convergent evolution of stress responses in distant bacterial species lacking SOS? Curr Opin Microbiol 2012;15:570-6. [PMID: 22910199 DOI: 10.1016/j.mib.2012.08.001] [Cited by in Crossref: 58] [Cited by in F6Publishing: 54] [Article Influence: 5.8] [Reference Citation Analysis]
32 Grayson KM, Blevins LK, Oliver MB, Ornelles DA, Swords WE, Alexander-Miller MA. Activation-dependent modulation of Streptococcus pneumoniae-mediated death in human lymphocytes. Pathog Dis 2017;75. [PMID: 28158464 DOI: 10.1093/femspd/ftx008] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 0.4] [Reference Citation Analysis]
33 Morton ER, Platt TG, Fuqua C, Bever JD. Non-additive costs and interactions alter the competitive dynamics of co-occurring ecologically distinct plasmids. Proc Biol Sci 2014;281:20132173. [PMID: 24500159 DOI: 10.1098/rspb.2013.2173] [Cited by in Crossref: 22] [Cited by in F6Publishing: 17] [Article Influence: 2.8] [Reference Citation Analysis]
34 Engelmoer DJ, Donaldson I, Rozen DE. Conservative sex and the benefits of transformation in Streptococcus pneumoniae. PLoS Pathog 2013;9:e1003758. [PMID: 24244172 DOI: 10.1371/journal.ppat.1003758] [Cited by in Crossref: 27] [Cited by in F6Publishing: 23] [Article Influence: 3.0] [Reference Citation Analysis]
35 Ahmed A, Earl J, Retchless A, Hillier SL, Rabe LK, Cherpes TL, Powell E, Janto B, Eutsey R, Hiller NL, Boissy R, Dahlgren ME, Hall BG, Costerton JW, Post JC, Hu FZ, Ehrlich GD. Comparative genomic analyses of 17 clinical isolates of Gardnerella vaginalis provide evidence of multiple genetically isolated clades consistent with subspeciation into genovars. J Bacteriol 2012;194:3922-37. [PMID: 22609915 DOI: 10.1128/JB.00056-12] [Cited by in Crossref: 115] [Cited by in F6Publishing: 71] [Article Influence: 11.5] [Reference Citation Analysis]
36 Georgiades K, Raoult D. How microbiology helps define the rhizome of life. Front Cell Infect Microbiol 2012;2:60. [PMID: 22919651 DOI: 10.3389/fcimb.2012.00060] [Cited by in Crossref: 8] [Cited by in F6Publishing: 7] [Article Influence: 0.8] [Reference Citation Analysis]
37 Sabharwal V, Stevenson A, Figueira M, Orthopoulos G, Trzciński K, Pelton SI. Capsular switching as a strategy to increase pneumococcal virulence in experimental otitis media model. Microbes and Infection 2014;16:292-9. [DOI: 10.1016/j.micinf.2013.12.002] [Cited by in Crossref: 8] [Cited by in F6Publishing: 7] [Article Influence: 1.0] [Reference Citation Analysis]
38 Valente C, Cruz AR, Henriques AO, Sá-Leão R. Intra-Species Interactions in Streptococcus pneumoniae Biofilms. Front Cell Infect Microbiol 2021;11:803286. [PMID: 35071049 DOI: 10.3389/fcimb.2021.803286] [Reference Citation Analysis]
39 Fani F, Leprohon P, Zhanel GG, Bergeron MG, Ouellette M. Genomic analyses of DNA transformation and penicillin resistance in Streptococcus pneumoniae clinical isolates. Antimicrob Agents Chemother 2014;58:1397-403. [PMID: 24342643 DOI: 10.1128/AAC.01311-13] [Cited by in Crossref: 16] [Cited by in F6Publishing: 10] [Article Influence: 1.8] [Reference Citation Analysis]
40 Antic I, Brothers KM, Stolzer M, Lai H, Powell E, Eutsey R, Cuevas RA, Miao X, Kowalski RP, Shanks RMQ, Durand D, Hiller NL. Gene Acquisition by a Distinct Phyletic Group within Streptococcus pneumoniae Promotes Adhesion to the Ocular Epithelium. mSphere 2017;2:e00213-17. [PMID: 29085912 DOI: 10.1128/mSphere.00213-17] [Cited by in Crossref: 5] [Cited by in F6Publishing: 6] [Article Influence: 1.0] [Reference Citation Analysis]
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42 Cowley LA, Petersen FC, Junges R, Jimson D Jimenez M, Morrison DA, Hanage WP. Evolution via recombination: Cell-to-cell contact facilitates larger recombination events in Streptococcus pneumoniae. PLoS Genet 2018;14:e1007410. [PMID: 29897968 DOI: 10.1371/journal.pgen.1007410] [Cited by in Crossref: 21] [Cited by in F6Publishing: 16] [Article Influence: 5.3] [Reference Citation Analysis]
43 Kadam A, Janto B, Eutsey R, Earl JP, Powell E, Dahlgren ME, Hu FZ, Ehrlich GD, Hiller NL. Streptococcus pneumoniae Supragenome Hybridization Arrays for Profiling of Genetic Content and Gene Expression. Curr Protoc Microbiol 2015;36:9D.4.1-9D.4.20. [PMID: 25641101 DOI: 10.1002/9780471729259.mc09d04s36] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.4] [Reference Citation Analysis]
44 Khardori N. Future of diagnostic microbiology. Indian J Med Microbiol 2014;32:371-7. [PMID: 25297019 DOI: 10.4103/0255-0857.142233] [Cited by in Crossref: 11] [Cited by in F6Publishing: 7] [Article Influence: 1.6] [Reference Citation Analysis]
45 Wyres KL, Lambertsen LM, Croucher NJ, McGee L, von Gottberg A, Liñares J, Jacobs MR, Kristinsson KG, Beall BW, Klugman KP, Parkhill J, Hakenbeck R, Bentley SD, Brueggemann AB. The multidrug-resistant PMEN1 pneumococcus is a paradigm for genetic success. Genome Biol 2012;13:R103. [PMID: 23158461 DOI: 10.1186/gb-2012-13-11-r103] [Cited by in Crossref: 38] [Cited by in F6Publishing: 33] [Article Influence: 3.8] [Reference Citation Analysis]
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50 Murrah KA, Pang B, Richardson S, Perez A, Reimche J, King L, Wren J, Swords WE. Nonencapsulated Streptococcus pneumoniae causes otitis media during single-species infection and during polymicrobial infection with nontypeable Haemophilus influenzae. Pathog Dis 2015;73:ftu011. [PMID: 26014114 DOI: 10.1093/femspd/ftu011] [Cited by in Crossref: 22] [Cited by in F6Publishing: 20] [Article Influence: 2.8] [Reference Citation Analysis]
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60 Chang B, Morita M, Lee KI, Ohnishi M. Whole-Genome Sequence Analysis of Streptococcus pneumoniae Strains That Cause Hospital-Acquired Pneumonia Infections. J Clin Microbiol 2018;56:e01822-17. [PMID: 29444837 DOI: 10.1128/JCM.01822-17] [Cited by in Crossref: 9] [Cited by in F6Publishing: 3] [Article Influence: 2.3] [Reference Citation Analysis]
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