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For: Trost B, Kindrachuk J, Määttänen P, Napper S, Kusalik A. PIIKA 2: an expanded, web-based platform for analysis of kinome microarray data. PLoS One 2013;8:e80837. [PMID: 24312246 DOI: 10.1371/journal.pone.0080837] [Cited by in Crossref: 42] [Cited by in F6Publishing: 41] [Article Influence: 4.7] [Reference Citation Analysis]
Number Citing Articles
1 Wu RY, Abdullah M, Määttänen P, Pilar AV, Scruten E, Johnson-Henry KC, Napper S, O'Brien C, Jones NL, Sherman PM. Protein kinase C δ signaling is required for dietary prebiotic-induced strengthening of intestinal epithelial barrier function. Sci Rep 2017;7:40820. [PMID: 28098206 DOI: 10.1038/srep40820] [Cited by in Crossref: 28] [Cited by in F6Publishing: 27] [Article Influence: 5.6] [Reference Citation Analysis]
2 Kandel A, Dhillon SK, Prabaharan CB, Fatnin Binti Hisham S, Rajamanickam K, Napper S, Chidambaram SB, Essa MM, Yang J, Sakharkar MK. Identifying kinase targets of PPARγ in human breast cancer. J Drug Target 2021;29:660-8. [PMID: 33496213 DOI: 10.1080/1061186X.2021.1877719] [Reference Citation Analysis]
3 Chen Y, Stookey J, Arsenault R, Scruten E, Griebel P, Napper S. Investigation of the physiological, behavioral, and biochemical responses of cattle to restraint stress. J Anim Sci 2016;94:3240-54. [PMID: 27695781 DOI: 10.2527/jas.2016-0549] [Cited by in Crossref: 11] [Cited by in F6Publishing: 9] [Article Influence: 2.2] [Reference Citation Analysis]
4 Peppelenbosch MP, Frijns N, Fuhler G. Systems medicine approaches for peptide array-based protein kinase profiling: progress and prospects. Expert Rev Proteomics 2016;13:571-8. [PMID: 27241729 DOI: 10.1080/14789450.2016.1187564] [Cited by in Crossref: 9] [Cited by in F6Publishing: 8] [Article Influence: 1.5] [Reference Citation Analysis]
5 Arsenault RJ, Lee JT, Latham R, Carter B, Kogut MH. Changes in immune and metabolic gut response in broilers fed β-mannanase in β-mannan-containing diets. Poult Sci 2017;96:4307-16. [PMID: 29053819 DOI: 10.3382/ps/pex246] [Cited by in Crossref: 28] [Cited by in F6Publishing: 27] [Article Influence: 7.0] [Reference Citation Analysis]
6 Baharani A, Trost B, Kusalik A, Napper S. Technological advances for interrogating the human kinome. Biochem Soc Trans 2017;45:65-77. [PMID: 28202660 DOI: 10.1042/BST20160163] [Cited by in Crossref: 19] [Cited by in F6Publishing: 11] [Article Influence: 3.8] [Reference Citation Analysis]
7 Swaggerty CL, Byrd JA 2nd, Arsenault RJ, Perry F, Johnson CN, Genovese KJ, He H, Kogut MH, Piva A, Grilli E. A blend of microencapsulated organic acids and botanicals reduces necrotic enteritis via specific signaling pathways in broilers. Poult Sci 2022;101:101753. [PMID: 35240358 DOI: 10.1016/j.psj.2022.101753] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
8 Kogut MH, Genovese KJ, Byrd JA, Swaggerty CL, He H, Farnell Y, Arsenault RJ. Chicken-Specific Kinome Analysis of Early Host Immune Signaling Pathways in the Cecum of Newly Hatched Chickens Infected With Salmonella enterica Serovar Enteritidis. Front Cell Infect Microbiol 2022;12:899395. [DOI: 10.3389/fcimb.2022.899395] [Reference Citation Analysis]
9 Chen X, Shi SP, Xu HD, Suo SB, Qiu JD. A homology-based pipeline for global prediction of post-translational modification sites. Sci Rep 2016;6:25801. [PMID: 27174170 DOI: 10.1038/srep25801] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.5] [Reference Citation Analysis]
10 Daigle J, Van Wyk B, Trost B, Scruten E, Arsenault R, Kusalik A, Griebel PJ, Napper S. Peptide Arrays for Kinome Analysis of Livestock Species. Front Vet Sci 2014;1:4. [PMID: 26664912 DOI: 10.3389/fvets.2014.00004] [Cited by in Crossref: 9] [Cited by in F6Publishing: 8] [Article Influence: 1.1] [Reference Citation Analysis]
11 Awate S, Scruten E, Mutwiri G, Napper S. Kinome Analysis to Define Mechanisms of Adjuvant Action: PCEP Induces Unique Signaling at the Injection Site and Lymph Nodes. Vaccines (Basel) 2022;10:927. [PMID: 35746541 DOI: 10.3390/vaccines10060927] [Reference Citation Analysis]
12 Robertson AJ, Trost B, Scruten E, Robertson T, Mostajeran M, Connor W, Kusalik A, Griebel P, Napper S. Identification of developmentally-specific kinotypes and mechanisms of Varroa mite resistance through whole-organism, kinome analysis of honeybee. Front Genet 2014;5:139. [PMID: 24904639 DOI: 10.3389/fgene.2014.00139] [Cited by in Crossref: 26] [Cited by in F6Publishing: 22] [Article Influence: 3.3] [Reference Citation Analysis]
13 Kindrachuk J, Wahl-Jensen V, Safronetz D, Trost B, Hoenen T, Arsenault R, Feldmann F, Traynor D, Postnikova E, Kusalik A, Napper S, Blaney JE, Feldmann H, Jahrling PB. Ebola virus modulates transforming growth factor β signaling and cellular markers of mesenchyme-like transition in hepatocytes. J Virol 2014;88:9877-92. [PMID: 24942569 DOI: 10.1128/JVI.01410-14] [Cited by in Crossref: 39] [Cited by in F6Publishing: 26] [Article Influence: 4.9] [Reference Citation Analysis]
14 Lee A, Dal Pont GC, Farnell MB, Jarvis S, Battaglia M, Arsenault RJ, Kogut MH. Supplementing chestnut tannins in the broiler diet mediates a metabolic phenotype of the ceca. Poult Sci 2021;100:47-54. [PMID: 33357706 DOI: 10.1016/j.psj.2020.09.085] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
15 Redweik GAJ, Kogut MH, Arsenault RJ, Mellata M. Oral Treatment With Ileal Spores Triggers Immunometabolic Shifts in Chicken Gut. Front Vet Sci 2020;7:629. [PMID: 33102558 DOI: 10.3389/fvets.2020.00629] [Reference Citation Analysis]
16 Nickol ME, Lyle SM, Dennehy B, Kindrachuk J. Dysregulated Host Responses Underlie 2009 Pandemic Influenza-Methicillin Resistant Staphylococcus aureus Coinfection Pathogenesis at the Alveolar-Capillary Barrier. Cells 2020;9:E2472. [PMID: 33202895 DOI: 10.3390/cells9112472] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
17 Ward TL, Weber BP, Mendoza KM, Danzeisen JL, Llop K, Lang K, Clayton JB, Grace E, Brannon J, Radovic I, Beauclaire M, Heisel TJ, Knights D, Cardona C, Kogut M, Johnson C, Noll SL, Arsenault R, Reed KM, Johnson TJ. Antibiotics and Host-Tailored Probiotics Similarly Modulate Effects on the Developing Avian Microbiome, Mycobiome, and Host Gene Expression. mBio 2019;10:e02171-19. [PMID: 31615957 DOI: 10.1128/mBio.02171-19] [Cited by in Crossref: 10] [Cited by in F6Publishing: 8] [Article Influence: 3.3] [Reference Citation Analysis]
18 Baharani A, Wei Z, Roesler WJ, Mousseau DD. A Progressive Loss of phosphoSer138-Profilin Aligns with Symptomatic Course in the R6/2 Mouse Model of Huntington's Disease: Possible Sex-Dependent Signaling. Cell Mol Neurobiol 2020. [PMID: 33108594 DOI: 10.1007/s10571-020-00984-2] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
19 Aylward BA, Johnson CN, Perry F, Whelan R, Zhang C, Arsenault RJ. Broiler Chickens with 1950s Genetics Display a Stable Immune Profile as Measured by Kinome, mRNA Expression, and Metabolism when Stimulated Early in Life with CpG. Poultry Science 2022. [DOI: 10.1016/j.psj.2022.101775] [Reference Citation Analysis]
20 Arsenault RJ, Genovese KJ, He H, Wu H, Neish AS, Kogut MH. Wild-type and mutant AvrA- Salmonella induce broadly similar immune pathways in the chicken ceca with key differences in signaling intermediates and inflammation. Poult Sci 2016;95:354-63. [PMID: 26574031 DOI: 10.3382/ps/pev344] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 0.9] [Reference Citation Analysis]
21 Dussaq AM, Kennell T Jr, Eustace NJ, Anderson JC, Almeida JS, Willey CD. Kinomics toolbox-A web platform for analysis and viewing of kinomic peptide array data. PLoS One 2018;13:e0202139. [PMID: 30130366 DOI: 10.1371/journal.pone.0202139] [Cited by in Crossref: 6] [Cited by in F6Publishing: 5] [Article Influence: 1.5] [Reference Citation Analysis]
22 Kindrachuk J, Ork B, Hart BJ, Mazur S, Holbrook MR, Frieman MB, Traynor D, Johnson RF, Dyall J, Kuhn JH, Olinger GG, Hensley LE, Jahrling PB. Antiviral potential of ERK/MAPK and PI3K/AKT/mTOR signaling modulation for Middle East respiratory syndrome coronavirus infection as identified by temporal kinome analysis. Antimicrob Agents Chemother. 2015;59:1088-1099. [PMID: 25487801 DOI: 10.1128/aac.03659-14] [Cited by in Crossref: 193] [Cited by in F6Publishing: 155] [Article Influence: 24.1] [Reference Citation Analysis]
23 Raddatz G, Arsenault RJ, Aylward B, Whelan R, Böhl F, Lyko F. A chicken DNA methylation clock for the prediction of broiler health. Commun Biol 2021;4:76. [PMID: 33462334 DOI: 10.1038/s42003-020-01608-7] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
24 He H, Arsenault RJ, Genovese KJ, Swaggerty CL, Johnson C, Nisbet DJ, Kogut MH. Inhibition of calmodulin increases intracellular survival of Salmonella in chicken macrophage cells. Vet Microbiol 2019;232:156-61. [PMID: 30967327 DOI: 10.1016/j.vetmic.2019.02.013] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
25 Nickol ME, Ciric J, Falcinelli SD, Chertow DS, Kindrachuk J. Characterization of Host and Bacterial Contributions to Lung Barrier Dysfunction Following Co-infection with 2009 Pandemic Influenza and Methicillin Resistant Staphylococcus aureus. Viruses 2019;11:E116. [PMID: 30699912 DOI: 10.3390/v11020116] [Cited by in Crossref: 11] [Cited by in F6Publishing: 11] [Article Influence: 3.7] [Reference Citation Analysis]
26 Smith SE, Mellor P, Ward AK, Kendall S, McDonald M, Vizeacoumar FS, Vizeacoumar FJ, Napper S, Anderson DH. Molecular characterization of breast cancer cell lines through multiple omic approaches. Breast Cancer Res 2017;19:65. [PMID: 28583138 DOI: 10.1186/s13058-017-0855-0] [Cited by in Crossref: 39] [Cited by in F6Publishing: 37] [Article Influence: 7.8] [Reference Citation Analysis]
27 Falcinelli SD, Chertow DS, Kindrachuk J. Integration of Global Analyses of Host Molecular Responses with Clinical Data To Evaluate Pathogenesis and Advance Therapies for Emerging and Re-emerging Viral Infections. ACS Infect Dis 2016;2:787-99. [PMID: 27933782 DOI: 10.1021/acsinfecdis.6b00104] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 1.2] [Reference Citation Analysis]
28 Lee A, Cardoso Dal Pont G, Battaglia M, Arsenault RJ, Kogut MH. Role of JAK-STAT Pathway in Broiler Chicks Fed with Chestnut Tannins. Animals (Basel) 2021;11:337. [PMID: 33572892 DOI: 10.3390/ani11020337] [Reference Citation Analysis]
29 Arsenault RJ, Brown TR, Edrington TS, Nisbet DJ. Kinome Analysis of Cattle Peripheral Lymph Nodes to Elucidate Differential Response to Salmonella spp. Microorganisms 2022;10:120. [PMID: 35056570 DOI: 10.3390/microorganisms10010120] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
30 He H, Arsenault RJ, Genovese KJ, Johnson C, Kogut MH. Chicken macrophages infected with Salmonella (S.) Enteritidis or S. Heidelberg produce differential responses in immune and metabolic signaling pathways. Veterinary Immunology and Immunopathology 2018;195:46-55. [DOI: 10.1016/j.vetimm.2017.11.002] [Cited by in Crossref: 8] [Cited by in F6Publishing: 6] [Article Influence: 2.0] [Reference Citation Analysis]
31 Robertson AJ, Scruten E, Mostajeran M, Robertson T, Denomy C, Hogan D, Roesler A, Rutherford C, Kusalik A, Griebel P, Napper S. Kinome Analysis of Honeybee (Apis mellifera L.) Dark-Eyed Pupae Identifies Biomarkers and Mechanisms of Tolerance to Varroa Mite Infestation. Sci Rep 2020;10:2117. [PMID: 32034205 DOI: 10.1038/s41598-020-58927-2] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
32 Pascoe CD, Jha A, Ryu MH, Ragheb M, Vaghasiya J, Basu S, Stelmack GL, Srinathan S, Kidane B, Kindrachuk J, O'Byrne PM, Gauvreau GM, Ravandi A, Carlsten C, Halayko AJ; Canadian Respiratory Research Network. Allergen inhalation generates pro-inflammatory oxidised phosphatidylcholine associated with airway dysfunction. Eur Respir J 2021;57:2000839. [PMID: 32883680 DOI: 10.1183/13993003.00839-2020] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 3.0] [Reference Citation Analysis]
33 Bortoluzzi C, Lahaye L, Perry F, Arsenault RJ, Santin E, Korver DR, Kogut MH. A protected complex of biofactors and antioxidants improved growth performance and modulated the immunometabolic phenotype of broiler chickens undergoing early life stress. Poult Sci 2021;100:101176. [PMID: 34102483 DOI: 10.1016/j.psj.2021.101176] [Reference Citation Analysis]
34 Goel RK, Paczkowska M, Reimand J, Napper S, Lukong KE. Phosphoproteomics Analysis Identifies Novel Candidate Substrates of the Nonreceptor Tyrosine Kinase, Src-related Kinase Lacking C-terminal Regulatory Tyrosine and N-terminal Myristoylation Sites (SRMS). Mol Cell Proteomics 2018;17:925-47. [PMID: 29496907 DOI: 10.1074/mcp.RA118.000643] [Cited by in Crossref: 9] [Cited by in F6Publishing: 6] [Article Influence: 2.3] [Reference Citation Analysis]
35 Falcinelli S, Gowen BB, Trost B, Napper S, Kusalik A, Johnson RF, Safronetz D, Prescott J, Wahl-Jensen V, Jahrling PB, Kindrachuk J. Characterization of the host response to pichinde virus infection in the Syrian golden hamster by species-specific kinome analysis. Mol Cell Proteomics 2015;14:646-57. [PMID: 25573744 DOI: 10.1074/mcp.M114.045443] [Cited by in Crossref: 14] [Cited by in F6Publishing: 8] [Article Influence: 2.0] [Reference Citation Analysis]
36 Johnson CN, Hashim MM, Bailey CA, Byrd JA, Kogut MH, Arsenault RJ. Feeding of yeast cell wall extracts during a necrotic enteritis challenge enhances cell growth, survival and immune signaling in the jejunum of broiler chickens. Poult Sci 2020;99:2955-66. [PMID: 32475430 DOI: 10.1016/j.psj.2020.03.012] [Reference Citation Analysis]
37 Napper S, Dadgar S, Arsenault RJ, Trost B, Scruten E, Kusalik A, Shand P. Induction of tissue- and stressor-specific kinomic responses in chickens exposed to hot and cold stresses. Poult Sci 2015;94:1333-45. [PMID: 25838314 DOI: 10.3382/ps/pev046] [Cited by in Crossref: 18] [Cited by in F6Publishing: 17] [Article Influence: 2.6] [Reference Citation Analysis]
38 Maleki F, Kusalik A. A Synthetic Kinome Microarray Data Generator. Microarrays (Basel) 2015;4:432-53. [PMID: 27600233 DOI: 10.3390/microarrays4040432] [Cited by in Crossref: 4] [Cited by in F6Publishing: 2] [Article Influence: 0.6] [Reference Citation Analysis]
39 Swaggerty CL, Arsenault RJ, Johnson C, Piva A, Grilli E. Dietary supplementation with a microencapsulated blend of organic acids and botanicals alters the kinome in the ileum and jejunum of Gallus gallus. PLoS One 2020;15:e0236950. [PMID: 32730335 DOI: 10.1371/journal.pone.0236950] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
40 Lipsit S, Facciuolo A, Scruten E, Wilkinson J, Plastow G, Kusalik A, Napper S. Signaling differences in peripheral blood mononuclear cells of high and low vaccine responders prior to, and following, vaccination in piglets. Vaccine X 2022;11:100167. [PMID: 35692279 DOI: 10.1016/j.jvacx.2022.100167] [Reference Citation Analysis]
41 Perry F, Johnson C, Aylward B, Arsenault RJ. The Differential Phosphorylation-Dependent Signaling and Glucose Immunometabolic Responses Induced during Infection by Salmonella Enteritidis and Salmonella Heidelberg in Chicken Macrophage-like cells. Microorganisms 2020;8:E1041. [PMID: 32674261 DOI: 10.3390/microorganisms8071041] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
42 Régnier M, Gourbeyre P, Pinton P, Napper S, Laffite J, Cossalter AM, Bailly JD, Lippi Y, Bertrand-Michel J, Bracarense APFRL, Guillou H, Loiseau N, Oswald IP. Identification of Signaling Pathways Targeted by the Food Contaminant FB1: Transcriptome and Kinome Analysis of Samples from Pig Liver and Intestine. Mol Nutr Food Res 2017;61. [PMID: 28875582 DOI: 10.1002/mnfr.201700433] [Cited by in Crossref: 13] [Cited by in F6Publishing: 11] [Article Influence: 2.6] [Reference Citation Analysis]
43 Denomy C, Lazarou C, Hogan D, Facciuolo A, Scruten E, Kusalik A, Napper S. PIIKA 2.5: Enhanced quality control of peptide microarrays for kinome analysis. PLoS One 2021;16:e0257232. [PMID: 34506584 DOI: 10.1371/journal.pone.0257232] [Reference Citation Analysis]
44 Johnson CN, Kogut MH, Genovese K, He H, Kazemi S, Arsenault RJ. Administration of a Postbiotic Causes Immunomodulatory Responses in Broiler Gut and Reduces Disease Pathogenesis Following Challenge. Microorganisms 2019;7:E268. [PMID: 31426502 DOI: 10.3390/microorganisms7080268] [Cited by in Crossref: 12] [Cited by in F6Publishing: 10] [Article Influence: 4.0] [Reference Citation Analysis]
45 Prabaharan CB, Yang AB, Chidambaram D, Rajamanickam K, Napper S, Sakharkar MK. Ibrutinib as a potential therapeutic option for HER2 overexpressing breast cancer - the role of STAT3 and p21. Invest New Drugs 2020;38:909-21. [PMID: 31375978 DOI: 10.1007/s10637-019-00837-w] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.0] [Reference Citation Analysis]
46 Facciuolo A, Denomy C, Lipsit S, Kusalik A, Napper S. From Beef to Bees: High-Throughput Kinome Analysis to Understand Host Responses of Livestock Species to Infectious Diseases and Industry-Associated Stress. Front Immunol 2020;11:765. [PMID: 32499776 DOI: 10.3389/fimmu.2020.00765] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
47 Wu RY, Määttänen P, Napper S, Scruten E, Li B, Koike Y, Johnson-Henry KC, Pierro A, Rossi L, Botts SR, Surette MG, Sherman PM. Non-digestible oligosaccharides directly regulate host kinome to modulate host inflammatory responses without alterations in the gut microbiota. Microbiome 2017;5:135. [PMID: 29017607 DOI: 10.1186/s40168-017-0357-4] [Cited by in Crossref: 33] [Cited by in F6Publishing: 30] [Article Influence: 6.6] [Reference Citation Analysis]