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For: Zoetendal EG, Rajilic-Stojanovic M, de Vos WM. High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota. Gut. 2008;57:1605-1615. [PMID: 18941009 DOI: 10.1136/gut.2007.133603] [Cited by in Crossref: 413] [Cited by in F6Publishing: 379] [Article Influence: 29.5] [Reference Citation Analysis]
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7 Sobhani I, Tap J, Roudot-Thoraval F, Roperch JP, Letulle S, Langella P, Corthier G, Tran Van Nhieu J, Furet JP. Microbial dysbiosis in colorectal cancer (CRC) patients. PLoS One. 2011;6:e16393. [PMID: 21297998 DOI: 10.1371/journal.pone.0016393] [Cited by in Crossref: 487] [Cited by in F6Publishing: 451] [Article Influence: 44.3] [Reference Citation Analysis]
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11 Biagi E, Nylund L, Candela M, Ostan R, Bucci L, Pini E, Nikkïla J, Monti D, Satokari R, Franceschi C. Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians. PLoS One. 2010;5:e10667. [PMID: 20498852 DOI: 10.1371/journal.pone.0010667] [Cited by in Crossref: 659] [Cited by in F6Publishing: 668] [Article Influence: 54.9] [Reference Citation Analysis]
12 Biagi E, Nylund L, Candela M, Ostan R, Bucci L, Pini E, Nikkïla J, Monti D, Satokari R, Franceschi C. Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians. PLoS One. 2010;5:e10667. [PMID: 20498852 DOI: 10.1371/annotation/df45912f-d15c-44ab-8312-e7ec0607604d] [Cited by in Crossref: 113] [Cited by in F6Publishing: 37] [Article Influence: 9.4] [Reference Citation Analysis]
13 Zhang X, Chen Y, Zhu J, Zhang M, Ho C, Huang Q, Cao J. Metagenomics Analysis of Gut Microbiota in a High Fat Diet-Induced Obesity Mouse Model Fed with (−)-Epigallocatechin 3- O -(3- O -Methyl) Gallate (EGCG3″Me). Mol Nutr Food Res 2018;62:1800274. [DOI: 10.1002/mnfr.201800274] [Cited by in Crossref: 42] [Cited by in F6Publishing: 42] [Article Influence: 10.5] [Reference Citation Analysis]
14 Gao RY, Zhu QC, Wu W, Qin HL. Compositional differences in fecal microbiota between rats with colorectal cancer and normal rats. Shijie Huaren Xiaohua Zazhi 2014; 22(5): 661-667 [DOI: 10.11569/wcjd.v22.i5.661] [Reference Citation Analysis]
15 Eslick GD. Future perspectives on infections associated with gastrointestinal tract diseases. Infect Dis Clin North Am 2010;24:1041-58, x. [PMID: 20937464 DOI: 10.1016/j.idc.2010.08.002] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
16 Tsigalou C, Stavropoulou E, Bezirtzoglou E. Current Insights in Microbiome Shifts in Sjogren's Syndrome and Possible Therapeutic Interventions. Front Immunol 2018;9:1106. [PMID: 29881381 DOI: 10.3389/fimmu.2018.01106] [Cited by in Crossref: 24] [Cited by in F6Publishing: 20] [Article Influence: 6.0] [Reference Citation Analysis]
17 Cieplak T, Wiese M, Nielsen S, Van de Wiele T, van den Berg F, Nielsen DS. The Smallest Intestine (TSI)-a low volume in vitro model of the small intestine with increased throughput. FEMS Microbiol Lett 2018;365. [PMID: 30247563 DOI: 10.1093/femsle/fny231] [Cited by in Crossref: 13] [Cited by in F6Publishing: 10] [Article Influence: 4.3] [Reference Citation Analysis]
18 Grewal S, Reuvers JRD, Abis GSA, Otten RHJ, Kazemier G, Stockmann HBAC, van Egmond M, Oosterling SJ. Oral Antibiotic Prophylaxis Reduces Surgical Site Infection and Anastomotic Leakage in Patients Undergoing Colorectal Cancer Surgery. Biomedicines 2021;9:1184. [PMID: 34572371 DOI: 10.3390/biomedicines9091184] [Reference Citation Analysis]
19 Kolmeder CA, de Been M, Nikkilä J, Ritamo I, Mättö J, Valmu L, Salojärvi J, Palva A, Salonen A, de Vos WM. Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions. PLoS One. 2012;7:e29913. [PMID: 22279554 DOI: 10.1371/journal.pone.0029913] [Cited by in Crossref: 150] [Cited by in F6Publishing: 129] [Article Influence: 15.0] [Reference Citation Analysis]
20 Claesson MJ, O'Sullivan O, Wang Q, Nikkilä J, Marchesi JR, Smidt H, de Vos WM, Ross RP, O'Toole PW. Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine. PLoS One 2009;4:e6669. [PMID: 19693277 DOI: 10.1371/journal.pone.0006669] [Cited by in Crossref: 554] [Cited by in F6Publishing: 507] [Article Influence: 42.6] [Reference Citation Analysis]
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22 Waller T, Chen C, Walker SL. Food and Industrial Grade Titanium Dioxide Impacts Gut Microbiota. Environmental Engineering Science 2017;34:537-50. [DOI: 10.1089/ees.2016.0364] [Cited by in Crossref: 29] [Cited by in F6Publishing: 13] [Article Influence: 5.8] [Reference Citation Analysis]
23 Fuentes S, van Nood E, Tims S, Heikamp-de Jong I, ter Braak CJ, Keller JJ, Zoetendal EG, de Vos WM. Reset of a critically disturbed microbial ecosystem: faecal transplant in recurrent Clostridium difficile infection. ISME J. 2014;8:1621-1633. [PMID: 24577353 DOI: 10.1038/ismej.2014.13] [Cited by in Crossref: 125] [Cited by in F6Publishing: 109] [Article Influence: 15.6] [Reference Citation Analysis]
24 Ladirat SE, Schols HA, Nauta A, Schoterman MH, Keijser BJ, Montijn RC, Gruppen H, Schuren FH. High-throughput analysis of the impact of antibiotics on the human intestinal microbiota composition. J Microbiol Methods 2013;92:387-97. [PMID: 23266580 DOI: 10.1016/j.mimet.2012.12.011] [Cited by in Crossref: 45] [Cited by in F6Publishing: 40] [Article Influence: 4.5] [Reference Citation Analysis]
25 van Passel MW, Kant R, Zoetendal EG, Plugge CM, Derrien M, Malfatti SA, Chain PS, Woyke T, Palva A, de Vos WM, Smidt H. The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes. PLoS One 2011;6:e16876. [PMID: 21390229 DOI: 10.1371/journal.pone.0016876] [Cited by in Crossref: 204] [Cited by in F6Publishing: 194] [Article Influence: 18.5] [Reference Citation Analysis]
26 Fouhy F, Guinane CM, Hussey S, Wall R, Ryan CA, Dempsey EM, Murphy B, Ross RP, Fitzgerald GF, Stanton C, Cotter PD. High-throughput sequencing reveals the incomplete, short-term recovery of infant gut microbiota following parenteral antibiotic treatment with ampicillin and gentamicin. Antimicrob Agents Chemother. 2012;56:5811-5820. [PMID: 22948872 DOI: 10.1128/aac.00789-12] [Cited by in Crossref: 283] [Cited by in F6Publishing: 153] [Article Influence: 28.3] [Reference Citation Analysis]
27 Wirth R, Bódi N, Maróti G, Bagyánszki M, Talapka P, Fekete É, Bagi Z, Kovács KL. Regionally distinct alterations in the composition of the gut microbiota in rats with streptozotocin-induced diabetes. PLoS One. 2014;9:e110440. [PMID: 25469509 DOI: 10.1371/journal.pone.0110440] [Cited by in Crossref: 37] [Cited by in F6Publishing: 39] [Article Influence: 4.6] [Reference Citation Analysis]
28 Sun Y, Ma Y, Lin P, Tang YW, Yang L, Shen Y, Zhang R, Liu L, Cheng J, Shao J, Qi T, Tang Y, Cai R, Guan L, Luo B, Sun M, Li B, Pei Z, Lu H. Fecal bacterial microbiome diversity in chronic HIV-infected patients in China. Emerg Microbes Infect 2016;5:e31. [PMID: 27048741 DOI: 10.1038/emi.2016.25] [Cited by in Crossref: 29] [Cited by in F6Publishing: 36] [Article Influence: 4.8] [Reference Citation Analysis]
29 Shimizu H, Arai K, Asahara T, Takahashi T, Tsuji H, Matsumoto S, Takeuchi I, Kyodo R, Yamashiro Y. Stool preparation under anaerobic conditions contributes to retention of obligate anaerobes: potential improvement for fecal microbiota transplantation. BMC Microbiol 2021;21:275. [PMID: 34627158 DOI: 10.1186/s12866-021-02325-9] [Reference Citation Analysis]
30 Staudacher HM, Lomer MC, Anderson JL, Barrett JS, Muir JG, Irving PM, Whelan K. Fermentable carbohydrate restriction reduces luminal bifidobacteria and gastrointestinal symptoms in patients with irritable bowel syndrome. J Nutr. 2012;142:1510-1518. [PMID: 22739368 DOI: 10.3945/jn.112.159285] [Cited by in Crossref: 313] [Cited by in F6Publishing: 254] [Article Influence: 31.3] [Reference Citation Analysis]
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35 Thomas S, Izard J, Walsh E, Batich K, Chongsathidkiet P, Clarke G, Sela DA, Muller AJ, Mullin JM, Albert K, Gilligan JP, DiGuilio K, Dilbarova R, Alexander W, Prendergast GC. The Host Microbiome Regulates and Maintains Human Health: A Primer and Perspective for Non-Microbiologists. Cancer Res 2017;77:1783-812. [PMID: 28292977 DOI: 10.1158/0008-5472.CAN-16-2929] [Cited by in Crossref: 133] [Cited by in F6Publishing: 84] [Article Influence: 26.6] [Reference Citation Analysis]
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37 Willebrand R, Kleinewietfeld M. The role of salt for immune cell function and disease. Immunology 2018;154:346-53. [PMID: 29465812 DOI: 10.1111/imm.12915] [Cited by in Crossref: 15] [Cited by in F6Publishing: 9] [Article Influence: 3.8] [Reference Citation Analysis]
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40 Knaapen M, Kootte R, Zoetendal E, de Vos W, Dallinga-thie G, Levi M, Stroes E, Nieuwdorp M. Obesity, non-alcoholic fatty liver disease, and atherothrombosis: a role for the intestinal microbiota? Clinical Microbiology and Infection 2013;19:331-7. [DOI: 10.1111/1469-0691.12170] [Cited by in Crossref: 15] [Cited by in F6Publishing: 13] [Article Influence: 1.7] [Reference Citation Analysis]
41 Fennema D, Phillips IR, Shephard EA. Trimethylamine and Trimethylamine N-Oxide, a Flavin-Containing Monooxygenase 3 (FMO3)-Mediated Host-Microbiome Metabolic Axis Implicated in Health and Disease. Drug Metab Dispos 2016;44:1839-50. [PMID: 27190056 DOI: 10.1124/dmd.116.070615] [Cited by in Crossref: 147] [Cited by in F6Publishing: 130] [Article Influence: 24.5] [Reference Citation Analysis]
42 Zhang X, Zhang M, Ho C, Guo X, Wu Z, Weng P, Yan M, Cao J. Metagenomics analysis of gut microbiota modulatory effect of green tea polyphenols by high fat diet-induced obesity mice model. Journal of Functional Foods 2018;46:268-77. [DOI: 10.1016/j.jff.2018.05.003] [Cited by in Crossref: 44] [Cited by in F6Publishing: 27] [Article Influence: 11.0] [Reference Citation Analysis]
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44 Dewulf EM, Cani PD, Claus SP, Fuentes S, Puylaert PG, Neyrinck AM, Bindels LB, de Vos WM, Gibson GR, Thissen JP. Insight into the prebiotic concept: lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women. Gut. 2013;62:1112-1121. [PMID: 23135760 DOI: 10.1136/gutjnl-2012-303304] [Cited by in Crossref: 426] [Cited by in F6Publishing: 386] [Article Influence: 42.6] [Reference Citation Analysis]
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49 Su T, Liu R, Long Y, Quan S, Lai S, Wang L, Si J, Chen S. 1-Day or 5-Day Fecal Samples, Which One is More Beneficial to be Used for DNA-Based Gut Microbiota Study. Curr Microbiol 2018;75:288-95. [PMID: 29353421 DOI: 10.1007/s00284-017-1378-8] [Cited by in Crossref: 2] [Article Influence: 0.5] [Reference Citation Analysis]
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52 Young VB, Kahn SA, Schmidt TM, Chang EB. Studying the Enteric Microbiome in Inflammatory Bowel Diseases: Getting through the Growing Pains and Moving Forward. Front Microbiol 2011;2:144. [PMID: 21772835 DOI: 10.3389/fmicb.2011.00144] [Cited by in Crossref: 15] [Cited by in F6Publishing: 17] [Article Influence: 1.4] [Reference Citation Analysis]
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54 Rosser EC, Mauri C. A clinical update on the significance of the gut microbiota in systemic autoimmunity. J Autoimmun 2016;74:85-93. [PMID: 27481556 DOI: 10.1016/j.jaut.2016.06.009] [Cited by in Crossref: 67] [Cited by in F6Publishing: 59] [Article Influence: 11.2] [Reference Citation Analysis]
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