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For: Hartmann M, Howes CG, Veldre V, Schneider S, Vaishampayan PA, Yannarell AC, Quince C, Johansson P, Björkroth KJ, Abarenkov K, Hallam SJ, Mohn WW, Nilsson RH. V-REVCOMP: automated high-throughput detection of reverse complementary 16S rRNA gene sequences in large environmental and taxonomic datasets: Detection of reverse complementary 16S rRNA gene sequences. FEMS Microbiology Letters 2011;319:140-5. [DOI: 10.1111/j.1574-6968.2011.02274.x] [Cited by in Crossref: 11] [Cited by in F6Publishing: 10] [Article Influence: 1.0] [Reference Citation Analysis]
Number Citing Articles
1 Bengtsson-palme J, Ryberg M, Hartmann M, Branco S, Wang Z, Godhe A, De Wit P, Sánchez-garcía M, Ebersberger I, de Sousa F, Amend AS, Jumpponen A, Unterseher M, Kristiansson E, Abarenkov K, Bertrand YJK, Sanli K, Eriksson KM, Vik U, Veldre V, Nilsson RH, Bunce M. Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data. Methods Ecol Evol 2013. [DOI: 10.1111/2041-210x.12073] [Cited by in Crossref: 280] [Cited by in F6Publishing: 2] [Article Influence: 31.1] [Reference Citation Analysis]
2 Bengtsson J, Hartmann M, Unterseher M, Vaishampayan P, Abarenkov K, Durso L, Bik EM, Garey JR, Eriksson KM, Nilsson RH. Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets. Res Microbiol 2012;163:407-12. [PMID: 22824070 DOI: 10.1016/j.resmic.2012.07.001] [Cited by in Crossref: 11] [Cited by in F6Publishing: 11] [Article Influence: 1.1] [Reference Citation Analysis]
3 Bengtsson J, Eriksson KM, Hartmann M, Wang Z, Shenoy BD, Grelet GA, Abarenkov K, Petri A, Rosenblad MA, Nilsson RH. Metaxa: a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing datasets. Antonie Van Leeuwenhoek 2011;100:471-5. [PMID: 21674231 DOI: 10.1007/s10482-011-9598-6] [Cited by in Crossref: 59] [Cited by in F6Publishing: 51] [Article Influence: 5.4] [Reference Citation Analysis]
4 Cameron KA, Hagedorn B, Dieser M, Christner BC, Choquette K, Sletten R, Crump B, Kellogg C, Junge K. Diversity and potential sources of microbiota associated with snow on western portions of the Greenland Ice Sheet: Greenland Ice Sheet snow microbial diversity. Environ Microbiol 2015;17:594-609. [DOI: 10.1111/1462-2920.12446] [Cited by in Crossref: 37] [Cited by in F6Publishing: 30] [Article Influence: 4.6] [Reference Citation Analysis]
5 De Smet W, De Loof K, De Vos P, Dawyndt P, De Baets B. Filtering and ranking techniques for automated selection of high-quality 16S rRNA gene sequences. Systematic and Applied Microbiology 2013;36:549-59. [DOI: 10.1016/j.syapm.2013.09.001] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 0.4] [Reference Citation Analysis]
6 Nilsson RH, Abarenkov K, Kõljalg U. Molecular Techniques in Mycological Studies and Sequence Data Curating: Quality Control and Challenges. In: Li D, editor. Biology of Microfungi. Cham: Springer International Publishing; 2016. pp. 47-64. [DOI: 10.1007/978-3-319-29137-6_4] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.2] [Reference Citation Analysis]
7 Creevey CJ, Kelly WJ, Henderson G, Leahy SC. Determining the culturability of the rumen bacterial microbiome. Microb Biotechnol 2014;7:467-79. [PMID: 24986151 DOI: 10.1111/1751-7915.12141] [Cited by in Crossref: 92] [Cited by in F6Publishing: 81] [Article Influence: 11.5] [Reference Citation Analysis]
8 Navarrete AA, Kuramae EE, de Hollander M, Pijl AS, van Veen JA, Tsai SM. Acidobacterial community responses to agricultural management of soybean in Amazon forest soils. FEMS Microbiol Ecol 2013;83:607-21. [PMID: 23013447 DOI: 10.1111/1574-6941.12018] [Cited by in Crossref: 141] [Cited by in F6Publishing: 110] [Article Influence: 14.1] [Reference Citation Analysis]
9 Bengtsson-Palme J, Boulund F, Edström R, Feizi A, Johnning A, Jonsson VA, Karlsson FH, Pal C, Pereira MB, Rehammar A, Sanchez J, Sanli K, Thorell K. Strategies to improve usability and preserve accuracy in biological sequence databases. Proteomics 2016;16:2454-60. [PMID: 27528420 DOI: 10.1002/pmic.201600034] [Cited by in Crossref: 23] [Cited by in F6Publishing: 14] [Article Influence: 4.6] [Reference Citation Analysis]
10 Nilsson RH, Tedersoo L, Abarenkov K, Ryberg M, Kristiansson E, Hartmann M, Schoch CL, Nylander JAA, Bergsten J, Porter TM, Jumpponen A, Vaishampayan P, Ovaskainen O, Hallenberg N, Bengtsson-palme J, Eriksson KM, Larsson K, Larsson E, Kõljalg U. Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences. MC 2012;4:37-63. [DOI: 10.3897/mycokeys.4.3606] [Cited by in Crossref: 112] [Cited by in F6Publishing: 41] [Article Influence: 11.2] [Reference Citation Analysis]