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For: Schmitt AO, Specht T, Beckmann G, Dahl E, Pilarsky CP, Hinzmann B, Rosenthal A. Exhaustive mining of EST libraries for genes differentially expressed in normal and tumour tissues. Nucleic Acids Res. 1999;27:4251-4260. [PMID: 10518618 DOI: 10.1093/nar/27.21.4251] [Cited by in Crossref: 89] [Cited by in F6Publishing: 81] [Article Influence: 3.9] [Reference Citation Analysis]
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10 Himmelfarb M, Klopocki E, Grube S, Staub E, Klaman I, Hinzmann B, Kristiansen G, Rosenthal A, Dürst M, Dahl E. ITIH5, a novel member of the inter-alpha-trypsin inhibitor heavy chain family is downregulated in breast cancer. Cancer Lett 2004;204:69-77. [PMID: 14744536 DOI: 10.1016/j.canlet.2003.09.011] [Cited by in Crossref: 49] [Cited by in F6Publishing: 45] [Article Influence: 2.7] [Reference Citation Analysis]
11 Nie D, Xiang Y. Molecular cloning and characterization of a novel human testis-specific gene by use of digital differential display. J Genet 2006;85:57-62. [DOI: 10.1007/bf02728971] [Cited by in Crossref: 4] [Cited by in F6Publishing: 2] [Article Influence: 0.3] [Reference Citation Analysis]
12 Aouacheria A, Navratil V, Barthelaix A, Mouchiroud D, Gautier C. Bioinformatic screening of human ESTs for differentially expressed genes in normal and tumor tissues. BMC Genomics 2006;7:94. [PMID: 16640784 DOI: 10.1186/1471-2164-7-94] [Cited by in Crossref: 16] [Cited by in F6Publishing: 11] [Article Influence: 1.0] [Reference Citation Analysis]
13 Hecht J, Kuhl H, Haas SA, Bauer S, Poustka AJ, Lienau J, Schell H, Stiege AC, Seitz V, Reinhardt R, Duda GN, Mundlos S, Robinson PN. Gene identification and analysis of transcripts differentially regulated in fracture healing by EST sequencing in the domestic sheep. BMC Genomics 2006;7:172. [PMID: 16822315 DOI: 10.1186/1471-2164-7-172] [Cited by in Crossref: 21] [Cited by in F6Publishing: 20] [Article Influence: 1.3] [Reference Citation Analysis]
14 Zafrakas M, Chorovicer M, Klaman I, Kristiansen G, Wild PJ, Heindrichs U, Knüchel R, Dahl E. Systematic characterisation of GABRP expression in sporadic breast cancer and normal breast tissue. Int J Cancer 2006;118:1453-9. [PMID: 16187283 DOI: 10.1002/ijc.21517] [Cited by in Crossref: 30] [Cited by in F6Publishing: 28] [Article Influence: 2.0] [Reference Citation Analysis]
15 Liu D, Graber JH. Quantitative comparison of EST libraries requires compensation for systematic biases in cDNA generation. BMC Bioinformatics. 2006;7:77. [PMID: 16503995 DOI: 10.1186/1471-2105-7-77] [Cited by in Crossref: 25] [Cited by in F6Publishing: 22] [Article Influence: 1.6] [Reference Citation Analysis]
16 Liu YB, Wei ZX, Li L, Li HS, Chen H, Li XW. Construction and analysis of SSH cDNA library of human vascular endothelial cells related to gastrocarcinoma. World J Gastroenterol 2003; 9(11): 2419-2423 [PMID: 14606068 DOI: 10.3748/wjg.v9.i11.2419] [Cited by in CrossRef: 1] [Article Influence: 0.1] [Reference Citation Analysis]
17 Strausberg RL, Greenhut SF, Grouse LH, Schaefer CF, Buetow KH. In silico analysis of cancer through the Cancer Genome Anatomy Project. Trends in Cell Biology 2001;11:S66-71. [DOI: 10.1016/s0962-8924(01)82370-9] [Cited by in Crossref: 10] [Article Influence: 0.5] [Reference Citation Analysis]
18 Prade RA, Ayoubi P, Krishnan S, Macwana S, Russell H. Accumulation of Stress and Inducer-Dependent Plant-Cell-Wall-Degrading Enzymes During Asexual Development in Aspergillus nidulans. Genetics 2001;157:957-67. [DOI: 10.1093/genetics/157.3.957] [Cited by in Crossref: 23] [Cited by in F6Publishing: 24] [Article Influence: 1.1] [Reference Citation Analysis]
19 Liu Y, Li Y, Guo F, Dai M, Wang J, Hu J, Li G. Identification of HTA as a novel-specific marker for human hepatocellular carcinoma. J Cancer Res Clin Oncol 2010;136:1187-92. [PMID: 20130911 DOI: 10.1007/s00432-010-0767-1] [Cited by in Crossref: 6] [Cited by in F6Publishing: 4] [Article Influence: 0.5] [Reference Citation Analysis]
20 Steinemann D, Gesk S, Zhang Y, Harder L, Pilarsky C, Hinzmann B, Martin-Subero JI, Calasanz MJ, Mungall A, Rosenthal A, Siebert R, Schlegelberger B. Identification of candidate tumor-suppressor genes in 6q27 by combined deletion mapping and electronic expression profiling in lymphoid neoplasms. Genes Chromosomes Cancer 2003;37:421-6. [PMID: 12800155 DOI: 10.1002/gcc.10231] [Cited by in Crossref: 28] [Cited by in F6Publishing: 29] [Article Influence: 1.5] [Reference Citation Analysis]
21 Aouacheria A, Navratil V, López-Pérez R, Gutiérrez NC, Churkin A, Barash D, Mouchiroud D, Gautier C. In silico whole-genome screening for cancer-related single-nucleotide polymorphisms located in human mRNA untranslated regions. BMC Genomics 2007;8:2. [PMID: 17201911 DOI: 10.1186/1471-2164-8-2] [Cited by in Crossref: 17] [Cited by in F6Publishing: 14] [Article Influence: 1.1] [Reference Citation Analysis]
22 Kirischian NL, Wilson JY. Phylogenetic and functional analyses of the cytochrome P450 family 4. Molecular Phylogenetics and Evolution 2012;62:458-71. [DOI: 10.1016/j.ympev.2011.10.016] [Cited by in Crossref: 25] [Cited by in F6Publishing: 23] [Article Influence: 2.5] [Reference Citation Analysis]
23 Gitton Y, Dahmane N, Baik S, Ruiz i Altaba A, Neidhardt L, Scholze M, Herrmann BG, Kahlem P, Benkahla A, Schrinner S. A gene expression map of human chromosome 21 orthologues in the mouse. Nature. 2002;420:586-590. [PMID: 12466855 DOI: 10.1038/nature01270] [Cited by in Crossref: 83] [Cited by in F6Publishing: 80] [Article Influence: 4.2] [Reference Citation Analysis]
24 Yuan J, Liu Y, Wang Y, Xie G, Blevins R. Genome analysis with gene-indexing databases. Pharmacology & Therapeutics 2001;91:115-32. [DOI: 10.1016/s0163-7258(01)00151-6] [Cited by in Crossref: 15] [Cited by in F6Publishing: 5] [Article Influence: 0.7] [Reference Citation Analysis]
25 Salzburger W, Renn SC, Steinke D, Braasch I, Hofmann HA, Meyer A. Annotation of expressed sequence tags for the East African cichlid fish Astatotilapia burtoni and evolutionary analyses of cichlid ORFs. BMC Genomics 2008;9:96. [PMID: 18298844 DOI: 10.1186/1471-2164-9-96] [Cited by in Crossref: 44] [Cited by in F6Publishing: 44] [Article Influence: 3.1] [Reference Citation Analysis]
26 Leu JH, Chang CC, Wu JL, Hsu CW, Hirono I, Aoki T, Juan HF, Lo CF, Kou GH, Huang HC. Comparative analysis of differentially expressed genes in normal and white spot syndrome virus infected Penaeus monodon. BMC Genomics 2007;8:120. [PMID: 17506900 DOI: 10.1186/1471-2164-8-120] [Cited by in Crossref: 88] [Cited by in F6Publishing: 76] [Article Influence: 5.9] [Reference Citation Analysis]
27 Murray D, Doran P, MacMathuna P, Moss AC. In silico gene expression analysis--an overview. Mol Cancer. 2007;6:50. [PMID: 17683638 DOI: 10.1186/1476-4598-6-50] [Cited by in Crossref: 32] [Cited by in F6Publishing: 27] [Article Influence: 2.1] [Reference Citation Analysis]
28 Grützmann R, Pilarsky C, Staub E, Schmitt AO, Foerder M, Specht T, Hinzmann B, Dahl E, Alldinger I, Rosenthal A, Ockert D, Saeger HD. Systematic isolation of genes differentially expressed in normal and cancerous tissue of the pancreas. Pancreatology 2003;3:169-78. [PMID: 12748427 DOI: 10.1159/000070087] [Cited by in Crossref: 24] [Cited by in F6Publishing: 22] [Article Influence: 1.3] [Reference Citation Analysis]
29 Otto WR. Lung epithelial stem cells. J Pathol 2002;197:527-35. [DOI: 10.1002/path.1160] [Cited by in Crossref: 106] [Cited by in F6Publishing: 86] [Article Influence: 5.3] [Reference Citation Analysis]
30 Clegg N, Abbott D, Ferguson C, Coleman R, Nelson PS. Characterization and comparative analyses of transcriptomes from the normal and neoplastic human prostate. Prostate 2004;60:227-39. [DOI: 10.1002/pros.20055] [Cited by in Crossref: 5] [Cited by in F6Publishing: 3] [Article Influence: 0.3] [Reference Citation Analysis]
31 He T, Wang Q, Feng G, Hu Y, Wang L, Wang Y. Computational detection and functional analysis of human tissue-specific A-to-I RNA editing. PLoS One 2011;6:e18129. [PMID: 21448465 DOI: 10.1371/journal.pone.0018129] [Cited by in Crossref: 14] [Cited by in F6Publishing: 11] [Article Influence: 1.3] [Reference Citation Analysis]
32 Kristiansen G, Pilarsky C, Wissmann C, Stephan C, Weissbach L, Loy V, Loening S, Dietel M, Rosenthal A. ALCAM/CD166 is up-regulated in low-grade prostate cancer and progressively lost in high-grade lesions. Prostate 2003;54:34-43. [DOI: 10.1002/pros.10161] [Cited by in Crossref: 104] [Cited by in F6Publishing: 102] [Article Influence: 5.2] [Reference Citation Analysis]
33 Trendelenburg G, Prass K, Priller J, Kapinya K, Polley A, Muselmann C, Ruscher K, Kannbley U, Schmitt AO, Castell S, Wiegand F, Meisel A, Rosenthal A, Dirnagl U. Serial analysis of gene expression identifies metallothionein-II as major neuroprotective gene in mouse focal cerebral ischemia. J Neurosci 2002;22:5879-88. [PMID: 12122050 DOI: 20026603] [Cited by in Crossref: 128] [Article Influence: 6.4] [Reference Citation Analysis]
34 Lee C, Chan W, Cheung M, Cheng Y, Appleby VJ, Orme AT, Scotting PJ. CIC, a member of a novel subfamily of the HMG-box superfamily, is transiently expressed in developing granule neurons. Molecular Brain Research 2002;106:151-6. [DOI: 10.1016/s0169-328x(02)00439-4] [Cited by in Crossref: 52] [Cited by in F6Publishing: 28] [Article Influence: 2.6] [Reference Citation Analysis]
35 Ferguson DA, Chiang JT, Richardson JA, Graff J. eXPRESSION: an in silico tool to predict patterns of gene expression. Gene Expr Patterns 2005;5:619-28. [PMID: 15939374 DOI: 10.1016/j.modgep.2005.03.003] [Cited by in Crossref: 9] [Cited by in F6Publishing: 10] [Article Influence: 0.5] [Reference Citation Analysis]
36 Gupta S, Zink D, Korn B, Vingron M, Haas SA. Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing. BMC Genomics 2004;5:72. [PMID: 15453915 DOI: 10.1186/1471-2164-5-72] [Cited by in Crossref: 28] [Cited by in F6Publishing: 33] [Article Influence: 1.6] [Reference Citation Analysis]
37 Schwartz EF, Diego-Garcia E, Rodríguez de la Vega RC, Possani LD. Transcriptome analysis of the venom gland of the Mexican scorpion Hadrurus gertschi (Arachnida: Scorpiones). BMC Genomics 2007;8:119. [PMID: 17506894 DOI: 10.1186/1471-2164-8-119] [Cited by in Crossref: 107] [Cited by in F6Publishing: 92] [Article Influence: 7.1] [Reference Citation Analysis]
38 Keilin T, Pang X, Venkateswari J, Halaly T, Crane O, Keren A, Ogrodovitch A, Ophir R, Volpin H, Galbraith D, Or E. Digital expression profiling of a grape-bud EST collection leads to new insight into molecular events during grape-bud dormancy release. Plant Science 2007;173:446-57. [DOI: 10.1016/j.plantsci.2007.07.004] [Cited by in Crossref: 34] [Cited by in F6Publishing: 11] [Article Influence: 2.3] [Reference Citation Analysis]
39 Moreno JC, Pauws E, van Kampen AH, Jedlicková M, de Vijlder JJ, Ris-stalpers C. Cloning of Tissue-Specific Genes Using Serial Analysis of Gene Expression and a Novel Computational Substraction Approach. Genomics 2001;75:70-6. [DOI: 10.1006/geno.2001.6586] [Cited by in Crossref: 38] [Cited by in F6Publishing: 30] [Article Influence: 1.8] [Reference Citation Analysis]
40 Strausberg RL. The Cancer Genome Anatomy Project: new resources for reading the molecular signatures of cancer. J Pathol 2001;195:31-40. [PMID: 11568889 DOI: 10.1002/1096-9896(200109)195:1<31::AID-PATH920>3.0.CO;2-W] [Cited by in Crossref: 49] [Cited by in F6Publishing: 16] [Article Influence: 2.3] [Reference Citation Analysis]
41 Wissmann C, Wild PJ, Kaiser S, Roepcke S, Stoehr R, Woenckhaus M, Kristiansen G, Hsieh JC, Hofstaedter F, Hartmann A. WIF1, a component of the Wnt pathway, is down-regulated in prostate, breast, lung, and bladder cancer. J Pathol. 2003;201:204-212. [PMID: 14517837 DOI: 10.1002/path.1449] [Cited by in Crossref: 234] [Cited by in F6Publishing: 216] [Article Influence: 12.3] [Reference Citation Analysis]
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44 Wu TH, Chu LJ, Wang JC, Chen TW, Tien YJ, Lin WC, Ng WV. Meta-analytical biomarker search of EST expression data reveals three differentially expressed candidates. BMC Genomics 2012;13 Suppl 7:S12. [PMID: 23282184 DOI: 10.1186/1471-2164-13-S7-S12] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 0.4] [Reference Citation Analysis]
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47 Schmitt AO. Mining expressed sequence tag (EST) libraries for cancer-associated genes. Methods Mol Biol 2010;576:89-98. [PMID: 19882259 DOI: 10.1007/978-1-59745-545-9_6] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.1] [Reference Citation Analysis]
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53 Yamamoto N, Daito M, Hiyama K, Ding J, Nakabayashi K, Otomo Y, Tsujimoto M, Matsuura N, Kato Y. An optimal mRNA marker for OSNA (One-step nucleic acid amplification) based lymph node metastasis detection in colorectal cancer patients. Jpn J Clin Oncol 2013;43:264-70. [PMID: 23293371 DOI: 10.1093/jjco/hys227] [Cited by in Crossref: 14] [Cited by in F6Publishing: 13] [Article Influence: 1.6] [Reference Citation Analysis]
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56 Valletti A, Anselmo A, Mangiulli M, Boria I, Mignone F, Merla G, D'Angelo V, Tullo A, Sbisà E, D'Erchia AM, Pesole G. Identification of tumor-associated cassette exons in human cancer through EST-based computational prediction and experimental validation. Mol Cancer 2010;9:230. [PMID: 20813049 DOI: 10.1186/1476-4598-9-230] [Cited by in Crossref: 5] [Cited by in F6Publishing: 4] [Article Influence: 0.4] [Reference Citation Analysis]
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