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For: Tripathi LP, Kataoka C, Taguwa S, Moriishi K, Mori Y, Matsuura Y, Mizuguchi K. Network based analysis of hepatitis C virus Core and NS4B protein interactions. Mol BioSyst 2010;6:2539. [DOI: 10.1039/c0mb00103a] [Cited by in Crossref: 39] [Cited by in F6Publishing: 41] [Article Influence: 3.5] [Reference Citation Analysis]
Number Citing Articles
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5 Xiang-Chun D, Xiao-Qing Y, Ting-Ting Y, Zhen-Hui L, Xiao-Yan L, Xia L, Yan-Chao H, Yi-Xuan Y, Li-Na M. Alpha-enolase regulates hepatitis B virus replication through suppression of the interferon signalling pathway. J Viral Hepat 2018;25:289-95. [PMID: 29080231 DOI: 10.1111/jvh.12813] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.8] [Reference Citation Analysis]
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7 Zhao T, Huang X, Xia Y. Human heart cell proteins interacting with a C-terminally truncated 2A protein of coxsackie B3 virus: identification by the yeast two-hybrid system. Virus Genes 2016;52:172-8. [PMID: 26781950 DOI: 10.1007/s11262-015-1270-1] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 0.6] [Reference Citation Analysis]
8 Mosca E, Alfieri R, Milanesi L. Diffusion of information throughout the host interactome reveals gene expression variations in network proximity to target proteins of hepatitis C virus. PLoS One 2014;9:e113660. [PMID: 25461596 DOI: 10.1371/journal.pone.0113660] [Cited by in Crossref: 8] [Cited by in F6Publishing: 7] [Article Influence: 1.1] [Reference Citation Analysis]
9 Wani SA, Sahu AR, Saxena S, Hussain S, Pandey A, Kanchan S, Sahoo AP, Mishra B, Tiwari AK, Mishra BP, Gandham RK, Singh RK. Systems biology approach: Panacea for unravelling host-virus interactions and dynamics of vaccine induced immune response. Gene Rep 2016;5:23-9. [PMID: 32289096 DOI: 10.1016/j.genrep.2016.08.002] [Cited by in Crossref: 1] [Article Influence: 0.2] [Reference Citation Analysis]
10 Gu Z, Graci JD, Lahser FC, Breslin JJ, Jung SP, Crona JH, McMonagle P, Xia E, Liu S, Karp G, Zhu J, Huang S, Nomeir A, Weetall M, Almstead NG, Peltz SW, Tong X, Ralston R, Colacino JM. Identification of PTC725, an orally bioavailable small molecule that selectively targets the hepatitis C Virus NS4B protein. Antimicrob Agents Chemother 2013;57:3250-61. [PMID: 23629699 DOI: 10.1128/AAC.00527-13] [Cited by in Crossref: 18] [Cited by in F6Publishing: 10] [Article Influence: 2.3] [Reference Citation Analysis]
11 Dolan PT, Zhang C, Khadka S, Arumugaswami V, Vangeloff AD, Heaton NS, Sahasrabudhe S, Randall G, Sun R, LaCount DJ. Identification and comparative analysis of hepatitis C virus-host cell protein interactions. Mol Biosyst. 2013;9:3199-3209. [PMID: 24136289 DOI: 10.1039/c3mb70343f] [Cited by in Crossref: 34] [Cited by in F6Publishing: 32] [Article Influence: 4.3] [Reference Citation Analysis]
12 Moriishi K, Matsuura Y. Exploitation of lipid components by viral and host proteins for hepatitis C virus infection. Front Microbiol. 2012;3:54. [PMID: 22347882 DOI: 10.3389/fmicb.2012.00054] [Cited by in Crossref: 25] [Cited by in F6Publishing: 22] [Article Influence: 2.8] [Reference Citation Analysis]
13 Gerold G, Bruening J, Weigel B, Pietschmann T. Protein Interactions during the Flavivirus and Hepacivirus Life Cycle. Mol Cell Proteomics 2017;16:S75-91. [PMID: 28077444 DOI: 10.1074/mcp.R116.065649] [Cited by in Crossref: 34] [Cited by in F6Publishing: 21] [Article Influence: 8.5] [Reference Citation Analysis]
14 Li S, Yu X, Guo Y, Kong L. Interaction networks of hepatitis C virus NS4B: implications for antiviral therapy. Cell Microbiol 2012;14:994-1002. [PMID: 22329740 DOI: 10.1111/j.1462-5822.2012.01773.x] [Cited by in Crossref: 29] [Cited by in F6Publishing: 24] [Article Influence: 3.2] [Reference Citation Analysis]
15 Germain MA, Chatel-Chaix L, Gagné B, Bonneil É, Thibault P, Pradezynski F, de Chassey B, Meyniel-Schicklin L, Lotteau V, Baril M. Elucidating novel hepatitis C virus-host interactions using combined mass spectrometry and functional genomics approaches. Mol Cell Proteomics. 2014;13:184-203. [PMID: 24169621 DOI: 10.1074/mcp.m113.030155] [Cited by in Crossref: 46] [Cited by in F6Publishing: 29] [Article Influence: 5.8] [Reference Citation Analysis]
16 Cheng S, Zhang M, Li W, Wang Y, Liu Y, He Q. Proteomic analysis of porcine alveolar macrophages infected with porcine circovirus type 2. Journal of Proteomics 2012;75:3258-69. [DOI: 10.1016/j.jprot.2012.03.039] [Cited by in Crossref: 24] [Cited by in F6Publishing: 24] [Article Influence: 2.7] [Reference Citation Analysis]
17 Li HC, Ma HC, Yang CH, Lo SY. Production and pathogenicity of hepatitis C virus core gene products. World J Gastroenterol 2014; 20(23): 7104-7122 [PMID: 24966583 DOI: 10.3748/wjg.v20.i23.7104] [Cited by in CrossRef: 20] [Cited by in F6Publishing: 15] [Article Influence: 2.9] [Reference Citation Analysis]
18 Ashraf MU, Iman K, Khalid MF, Salman HM, Shafi T, Rafi M, Javaid N, Hussain R, Ahmad F, Shahzad-Ul-Hussan S, Mirza S, Shafiq M, Afzal S, Hamera S, Anwar S, Qazi R, Idrees M, Qureshi SA, Chaudhary SU. Evolution of efficacious pangenotypic hepatitis C virus therapies. Med Res Rev 2019;39:1091-136. [PMID: 30506705 DOI: 10.1002/med.21554] [Cited by in Crossref: 7] [Cited by in F6Publishing: 7] [Article Influence: 2.3] [Reference Citation Analysis]
19 Kadjbaf D, Keshvari M, Alavian SM, Pouryasin A, Behnava B, Salimi S, Mehrnoush L, Karimi Elizee P, Sharafi H. The Prevalence of Hepatitis C Virus Core Amino Acid 70 Substitution and Genotypes of Polymorphisms Near the IFNL3 Gene in Iranian Patients With Chronic Hepatitis C. Hepat Mon 2016;16:e37011. [PMID: 27630727 DOI: 10.5812/hepatmon.37011] [Cited by in Crossref: 6] [Cited by in F6Publishing: 5] [Article Influence: 1.2] [Reference Citation Analysis]
20 Mazumder N, Lyn RK, Singaravelu R, Ridsdale A, Moffatt DJ, Hu CW, Tsai HR, McLauchlan J, Stolow A, Kao FJ, Pezacki JP. Fluorescence lifetime imaging of alterations to cellular metabolism by domain 2 of the hepatitis C virus core protein. PLoS One 2013;8:e66738. [PMID: 23826122 DOI: 10.1371/journal.pone.0066738] [Cited by in Crossref: 19] [Cited by in F6Publishing: 16] [Article Influence: 2.4] [Reference Citation Analysis]
21 Tripathi LP, Kambara H, Chen Y, Nishimura Y, Moriishi K, Okamoto T, Morita E, Abe T, Mori Y, Matsuura Y, Mizuguchi K. Understanding the Biological Context of NS5A–Host Interactions in HCV Infection: A Network-Based Approach. J Proteome Res 2013;12:2537-51. [DOI: 10.1021/pr3011217] [Cited by in Crossref: 23] [Cited by in F6Publishing: 19] [Article Influence: 2.9] [Reference Citation Analysis]
22 McDermott JE, Diamond DL, Corley C, Rasmussen AL, Katze MG, Waters KM. Topological analysis of protein co-abundance networks identifies novel host targets important for HCV infection and pathogenesis. BMC Syst Biol 2012;6:28. [PMID: 22546282 DOI: 10.1186/1752-0509-6-28] [Cited by in Crossref: 41] [Cited by in F6Publishing: 35] [Article Influence: 4.6] [Reference Citation Analysis]
23 Chen YA, Tripathi LP, Mizuguchi K. TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery. PLoS One 2011;6:e17844. [PMID: 21408081 DOI: 10.1371/journal.pone.0017844] [Cited by in Crossref: 91] [Cited by in F6Publishing: 71] [Article Influence: 9.1] [Reference Citation Analysis]
24 Durmuş S, Çakır T, Özgür A, Guthke R. A review on computational systems biology of pathogen-host interactions. Front Microbiol 2015;6:235. [PMID: 25914674 DOI: 10.3389/fmicb.2015.00235] [Cited by in Crossref: 20] [Cited by in F6Publishing: 40] [Article Influence: 3.3] [Reference Citation Analysis]
25 Welker M, Susser S, Welsch C, Perner D, Füller C, Kronenberger B, Herrmann E, Zeuzem S, Sarrazin C. Modulation of replication efficacy of the hepatitis C virus replicon Con1 by site-directed mutagenesis of an NS4B aminoterminal basic leucine zipper: HCV replication depends on intact NS4B- leucine zipper. Journal of Viral Hepatitis 2012;19:775-83. [DOI: 10.1111/j.1365-2893.2012.01605.x] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.3] [Reference Citation Analysis]
26 Arnold R, Boonen K, Sun MG, Kim PM. Computational analysis of interactomes: current and future perspectives for bioinformatics approaches to model the host-pathogen interaction space. Methods 2012;57:508-18. [PMID: 22750305 DOI: 10.1016/j.ymeth.2012.06.011] [Cited by in Crossref: 38] [Cited by in F6Publishing: 31] [Article Influence: 4.2] [Reference Citation Analysis]
27 Chen YA, Tripathi LP, Mizuguchi K. Data Warehousing with TargetMine for Omics Data Analysis. Methods Mol Biol 2019;1986:35-64. [PMID: 31115884 DOI: 10.1007/978-1-4939-9442-7_3] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
28 Tripathi LP, Mizuguchi K. A combined proteomics and computational approach provides a better understanding of HCV-induced liver disease. Expert Rev Proteomics. 2012;9:493-496. [PMID: 23194266 DOI: 10.1586/epr.12.47] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
29 Ngo HT, Pham LV, Kim JW, Lim YS, Hwang SB. Modulation of mitogen-activated protein kinase-activated protein kinase 3 by hepatitis C virus core protein. J Virol 2013;87:5718-31. [PMID: 23487458 DOI: 10.1128/JVI.03353-12] [Cited by in Crossref: 20] [Cited by in F6Publishing: 15] [Article Influence: 2.5] [Reference Citation Analysis]
30 Chen YA, Tripathi LP, Mizuguchi K. An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework. Database (Oxford) 2016;2016:baw009. [PMID: 26989145 DOI: 10.1093/database/baw009] [Cited by in Crossref: 22] [Cited by in F6Publishing: 16] [Article Influence: 4.4] [Reference Citation Analysis]
31 Han Y, Niu J, Wang D, Li Y. Hepatitis C Virus Protein Interaction Network Analysis Based on Hepatocellular Carcinoma. PLoS One 2016;11:e0153882. [PMID: 27115606 DOI: 10.1371/journal.pone.0153882] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 1.4] [Reference Citation Analysis]
32 Zhang H, Li H, Yang Y, Li S, Ren H, Zhang D, Hu H. Differential regulation of host genes including hepatic fatty acid synthase in HBV-transgenic mice. J Proteome Res 2013;12:2967-79. [PMID: 23675653 DOI: 10.1021/pr400247f] [Cited by in Crossref: 14] [Cited by in F6Publishing: 12] [Article Influence: 1.8] [Reference Citation Analysis]
33 Colpitts CC, El-Saghire H, Pochet N, Schuster C, Baumert TF. High-throughput approaches to unravel hepatitis C virus-host interactions. Virus Res 2016;218:18-24. [PMID: 26410623 DOI: 10.1016/j.virusres.2015.09.013] [Cited by in Crossref: 6] [Cited by in F6Publishing: 5] [Article Influence: 1.0] [Reference Citation Analysis]
34 Tripathi LP, Kambara H, Moriishi K, Morita E, Abe T, Mori Y, Chen YA, Matsuura Y, Mizuguchi K. Proteomic analysis of hepatitis C virus (HCV) core protein transfection and host regulator PA28γ knockout in HCV pathogenesis: a network-based study. J Proteome Res. 2012;11:3664-3679. [PMID: 22646850 DOI: 10.1021/pr300121a] [Cited by in Crossref: 11] [Cited by in F6Publishing: 11] [Article Influence: 1.2] [Reference Citation Analysis]
35 Yang Z, Ouyang T, Aoyagi H, Wang T, Xing X, Zhang Y, Wang Y, Li Y, Aizaki H, Li S, Kong L. Cellular OCIAD2 protein is a proviral factor for hepatitis C virus replication. Int J Biol Macromol 2021;188:147-59. [PMID: 34371038 DOI: 10.1016/j.ijbiomac.2021.08.032] [Reference Citation Analysis]
36 Ravindran V, Nacher JC, Akutsu T, Ishitsuka M, Osadcenco A, Sunitha V, Bagler G, Schwartz JM, Robertson DL. Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems. Sci Rep 2019;9:2066. [PMID: 30765882 DOI: 10.1038/s41598-018-38224-9] [Cited by in Crossref: 9] [Cited by in F6Publishing: 5] [Article Influence: 4.5] [Reference Citation Analysis]
37 Farooq QUA, Khan FF. Construction and analysis of a comprehensive protein interaction network of HCV with its host Homo sapiens. BMC Infect Dis 2019;19:367. [PMID: 31039741 DOI: 10.1186/s12879-019-4000-9] [Cited by in Crossref: 4] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
38 Law GL, Korth MJ, Benecke AG, Katze MG. Systems virology: host-directed approaches to viral pathogenesis and drug targeting. Nat Rev Microbiol 2013;11:455-66. [PMID: 23728212 DOI: 10.1038/nrmicro3036] [Cited by in Crossref: 51] [Cited by in F6Publishing: 44] [Article Influence: 6.4] [Reference Citation Analysis]
39 Mukhopadhyay A, Maulik U. Network-based study reveals potential infection pathways of hepatitis-C leading to various diseases. PLoS One 2014;9:e94029. [PMID: 24743187 DOI: 10.1371/journal.pone.0094029] [Cited by in Crossref: 15] [Cited by in F6Publishing: 8] [Article Influence: 2.1] [Reference Citation Analysis]
40 MacPherson JI, Sidders B, Wieland S, Zhong J, Targett-Adams P, Lohmann V, Backes P, Delpuech-Adams O, Chisari F, Lewis M. An integrated transcriptomic and meta-analysis of hepatoma cells reveals factors that influence susceptibility to HCV infection. PLoS One. 2011;6:e25584. [PMID: 22046242 DOI: 10.1371/journal.pone.0025584] [Cited by in Crossref: 16] [Cited by in F6Publishing: 15] [Article Influence: 1.6] [Reference Citation Analysis]
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