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Wcisel DJ, Dornburg A, McConnell SC, Hernandez KM, Andrade J, de Jong JLO, Litman GW, Yoder JA. A highly diverse set of novel immunoglobulin-like transcript (NILT) genes in zebrafish indicates a wide range of functions with complex relationships to mammalian receptors. Immunogenetics 2023;75:53-69. [PMID: 35869336 DOI: 10.1007/s00251-022-01270-9] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
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Mallik R, Carlson KB, Wcisel DJ, Fisk M, Yoder JA, Dornburg A. A chromosome level genome assembly of longnose gar,Lepisosteus osseus.. [DOI: 10.1101/2022.12.21.521478] [Reference Citation Analysis]
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Zhang R, Liu Q, Zhang Y, Qin Y, Du X, Lu Y, Yuan Z, Song Y, Zhang M, Wang K, He S, Liu X, Xu X, Yang H, Seim I, Fan G. A single-cell transcriptome atlas of the West African lungfish highlights the respiratory evolution of a fish adapted to water and land.. [DOI: 10.21203/rs.3.rs-2314784/v1] [Reference Citation Analysis]
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Dores RM, Mckinley G, Meyers A, Martin M, Shaughnessy CA. Structure/Function Studies on the Activation Motif of Two Non-Mammalian Mrap1 Orthologs, and Observations on the Phylogeny of Mrap1, Including a Novel Characterization of an Mrap1 from the Chondrostean Fish, Polyodon spathula. Biomolecules 2022;12:1681. [DOI: 10.3390/biom12111681] [Reference Citation Analysis]
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Brownstein CD, Kim D, Orr OD, Hogue GM, Tracy BH, Pugh MW, Singer R, Myles-McBurney C, Mollish JM, Simmons JW, David SR, Watkins-Colwell G, Hoffman EA, Near TJ. Hidden species diversity in an iconic living fossil vertebrate. Biol Lett 2022;18:20220395. [PMID: 36448369 DOI: 10.1098/rsbl.2022.0395] [Reference Citation Analysis]
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Wright JJ, Bruce SA, Sinopoli DA, Palumbo JR, Stewart DJ. Phylogenomic analysis of the bowfin (Amia calva) reveals unrecognized species diversity in a living fossil lineage. Sci Rep 2022;12:16514. [PMID: 36192509 DOI: 10.1038/s41598-022-20875-4] [Reference Citation Analysis]
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Lemopoulos A, Montoya-Burgos JI. Whole genome assembly of the armored loricariid catfish Ancistrus triradiatus highlights herbivory signatures. Mol Genet Genomics 2022. [PMID: 36006456 DOI: 10.1007/s00438-022-01947-6] [Reference Citation Analysis]
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Shaughnessy CA, Jensen MF, Dores RM. A basal actinopterygian melanocortin receptor: Molecular and functional characterization of an Mc2r ortholog from the Senegal bichir (Polypterus senegalus). Gen Comp Endocrinol 2022;328:114105. [PMID: 35973587 DOI: 10.1016/j.ygcen.2022.114105] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
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Annona G, Sato I, Pascual-Anaya J, Osca D, Braasch I, Voss R, Stundl J, Soukup V, Ferrara A, Fontenot Q, Kuratani S, Postlethwait JH, D'Aniello S. Evolution of the nitric oxide synthase family in vertebrates and novel insights in gill development. Proc Biol Sci 2022;289:20220667. [PMID: 35946155 DOI: 10.1098/rspb.2022.0667] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
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Brownstein CD, Kim D, Orr OD, Hogue GM, Tracy BH, Pugh MW, Singer R, Myles-mcburney C, Mollish JM, Simmons JW, David SR, Watkins-colwell G, Hoffman EA, Near TJ. Hidden species diversity in a living fossil vertebrate.. [DOI: 10.1101/2022.07.25.500718] [Reference Citation Analysis]
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Zhu C, Liu H, Pan Z, Cheng L, Sun Y, Wang H, Chang G, Wu N, Ding H, Zhao H, Zhang L, Yu X. Insights into chromosomal evolution and sex determination of Pseudobagrus ussuriensis (Bagridae, Siluriformes) based on a chromosome-level genome. DNA Research 2022;29. [DOI: 10.1093/dnares/dsac028] [Reference Citation Analysis]
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Redmond AK, Gundappa MK, Macqueen DJ, Mclysaght A. Extensive lineage-specific rediploidisation masks shared whole genome duplication in the sturgeon-paddlefish ancestor.. [DOI: 10.1101/2022.05.16.492067] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
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Parey E, Louis A, Montfort J, Bouchez O, Roques C, Iampietro C, Lluch J, Castinel A, Donnadieu C, Desvignes T, Bucao CF, Jouanno E, Wen M, Mejri S, Dirks R, Jansen H, Henkel C, Chen W, Zahm M, Cabau C, Klopp C, Thompson AW, Robinson-rechavi M, Braasch I, Lecointre G, Bobe J, Postlethwait JH, Berthelot C, Crollius HR, Guiguen Y. Genome structures resolve the early diversification of teleost fishes.. [DOI: 10.1101/2022.04.07.487469] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
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Thompson AW, Wojtas H, Davoll M, Braasch I. Genome of the Rio Pearlfish (Nematolebias whitei), a bi-annual killifish model for Eco-Evo-Devo in extreme environments. G3 (Bethesda) 2022;12:jkac045. [PMID: 35188191 DOI: 10.1093/g3journal/jkac045] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
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Purushothaman S, Lopez Aviña BB, Seifert AW. Sonic hedgehog is Essential for Proximal-Distal Outgrowth of the Limb Bud in Salamanders. Front Cell Dev Biol 2022;10:797352. [DOI: 10.3389/fcell.2022.797352] [Reference Citation Analysis]
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Ritchie AM, Hua X, Bromham L. Diversification Rate is Associated with Rate of Molecular Evolution in Ray-Finned Fish (Actinopterygii). J Mol Evol 2022. [PMID: 35262772 DOI: 10.1007/s00239-022-10052-6] [Reference Citation Analysis]
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Mikami M, Ineno T, Thompson AW, Braasch I, Ishiyama M, Kawasaki K. Convergent losses of SCPP genes and ganoid scales among non-teleost actinopterygians. Gene 2022;811:146091. [PMID: 34864098 DOI: 10.1016/j.gene.2021.146091] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
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Stundl J, Soukup V, Franěk R, Pospisilova A, Psutkova V, Pšenička M, Cerny R, Bronner ME, Medeiros DM, Jandzik D. Efficient CRISPR Mutagenesis in Sturgeon Demonstrates Its Utility in Large, Slow-Maturing Vertebrates. Front Cell Dev Biol 2022;10:750833. [DOI: 10.3389/fcell.2022.750833] [Reference Citation Analysis]
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Dornburg A, Yoder JA. On the relationship between extant innate immune receptors and the evolutionary origins of jawed vertebrate adaptive immunity. Immunogenetics 2022. [PMID: 34981186 DOI: 10.1007/s00251-021-01232-7] [Cited by in Crossref: 5] [Cited by in F6Publishing: 6] [Article Influence: 5.0] [Reference Citation Analysis]
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Dornburg A, Ota T, Criscitiello MF, Salinas I, Sunyer JO, Magadán S, Boudinot P, Xu Z, Flajnik MF, Singer A, Gambón-Deza F, Hansen JD, Yoder JA. From IgZ to IgT: A Call for a Common Nomenclature for Immunoglobulin Heavy Chain Genes of Ray-Finned Fish. Zebrafish 2021;18:343-5. [PMID: 34935497 DOI: 10.1089/zeb.2021.0071] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
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Dornburg A, Near TJ. The Emerging Phylogenetic Perspective on the Evolution of Actinopterygian Fishes. Annu Rev Ecol Evol Syst 2021;52:427-52. [DOI: 10.1146/annurev-ecolsys-122120-122554] [Cited by in Crossref: 13] [Cited by in F6Publishing: 17] [Article Influence: 6.5] [Reference Citation Analysis]
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Dornburg A, Wcisel DJ, Zapfe K, Ferraro E, Roupe-Abrams L, Thompson AW, Braasch I, Ota T, Yoder JA. Holosteans contextualize the role of the teleost genome duplication in promoting the rise of evolutionary novelties in the ray-finned fish innate immune system. Immunogenetics 2021;73:479-97. [PMID: 34510270 DOI: 10.1007/s00251-021-01225-6] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
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