BPG is committed to discovery and dissemination of knowledge
Cited by in F6Publishing
For: Arrigucci R, Bushkin Y, Radford F, Lakehal K, Vir P, Pine R, Martin D, Sugarman J, Zhao Y, Yap GS, Lardizabal AA, Tyagi S, Gennaro ML. FISH-Flow, a protocol for the concurrent detection of mRNA and protein in single cells using fluorescence in situ hybridization and flow cytometry. Nat Protoc 2017;12:1245-60. [PMID: 28518171 DOI: 10.1038/nprot.2017.039] [Cited by in Crossref: 49] [Cited by in F6Publishing: 54] [Article Influence: 8.2] [Reference Citation Analysis]
Number Citing Articles
1 van Wijk N, Zohar K, Linial M. Challenging Cellular Homeostasis: Spatial and Temporal Regulation of miRNAs. Int J Mol Sci 2022;23. [PMID: 36555797 DOI: 10.3390/ijms232416152] [Reference Citation Analysis]
2 Bongolo CC, Thokerunga E, Yan Q, Yacouba MBM, Wang C. Exosomes Derived from microRNA-27a-3p Overexpressing Mesenchymal Stem Cells Inhibit the Progression of Liver Cancer through Suppression of Golgi Membrane Protein 1. Stem Cells International 2022;2022:1-14. [DOI: 10.1155/2022/9748714] [Reference Citation Analysis]
3 Vance GH, Khan WA. Utility of Fluorescence In Situ Hybridization in Clinical and Research Applications. Clin Lab Med 2022;42:573-86. [PMID: 36368783 DOI: 10.1016/j.cll.2022.09.020] [Reference Citation Analysis]
4 Leonaviciene G, Mazutis L. RNA cytometry of single-cells using semi-permeable microcapsules. Nucleic Acids Res 2023;51:e2. [PMID: 36268865 DOI: 10.1093/nar/gkac918] [Reference Citation Analysis]
5 Real F, Zhu A, Huang B, Belmellat A, Sennepin A, Vogl T, Ransy C, Revol M, Arrigucci R, Lombès A, Roth J, Gennaro ML, Bouillaud F, Cristofari S, Bomsel M. S100A8-mediated metabolic adaptation controls HIV-1 persistence in macrophages in vivo. Nat Commun 2022;13:5956. [PMID: 36220814 DOI: 10.1038/s41467-022-33401-x] [Reference Citation Analysis]
6 Hazra R, Spector DL. Simultaneous visualization of RNA transcripts and proteins in whole-mount mouse preimplantation embryos using single-molecule fluorescence in situ hybridization and immunofluorescence microscopy. Front Cell Dev Biol 2022;10:986261. [DOI: 10.3389/fcell.2022.986261] [Reference Citation Analysis]
7 Datta K, LaRue R, Permpalung N, Das S, Zhang S, Mehta Steinke S, Bushkin Y, Nosanchuk JD, Marr KA. Development of an Interferon-Gamma Release Assay (IGRA) to Aid Diagnosis of Histoplasmosis. J Clin Microbiol 2022;:e0112822. [PMID: 36190260 DOI: 10.1128/jcm.01128-22] [Reference Citation Analysis]
8 Leonaviciene G, Mazutis L. RNA cytometry of single-cells using semi-permeable microcapsules.. [DOI: 10.1101/2022.09.24.509327] [Reference Citation Analysis]
9 Zhou JL, de Guglielmo G, Ho AJ, Kallupi M, Li H, Chitre AS, Carrette LL, George O, Palmer AA, Mcvicker G, Telese F. Cocaine addiction-like behaviors are associated with long-term changes in gene regulation, energy metabolism, and GABAergic inhibition within the amygdala.. [DOI: 10.1101/2022.09.08.506493] [Reference Citation Analysis]
10 Wittenstein T, Leibovich N, Hilfinger A. Quantifying biochemical reaction rates from static population variability within incompletely observed complex networks. PLoS Comput Biol 2022;18:e1010183. [DOI: 10.1371/journal.pcbi.1010183] [Reference Citation Analysis]
11 Vervaeke P, Borgos SE, Sanders NN, Combes F. Regulatory guidelines and preclinical tools to study the biodistribution of RNA therapeutics. Adv Drug Deliv Rev 2022;184:114236. [PMID: 35351470 DOI: 10.1016/j.addr.2022.114236] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 3.0] [Reference Citation Analysis]
12 Rafat A, Dizaji Asl K, Mazloumi Z, Movassaghpour AA, Farahzadi R, Nejati B, Nozad Charoudeh H. Telomerase-based therapies in haematological malignancies. Cell Biochem Funct 2022. [PMID: 35103334 DOI: 10.1002/cbf.3687] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
13 Ukey R, Bruiners N, Mishra H, Mishra PK, Mccloskey D, Onyuka A, Chen F, Pinter A, Weiskopf D, Sette A, Roy J, Gaur S, Gennaro ML. Dichotomy between the humoral and cellular responses elicited by mRNA and adenoviral vector vaccines against SARS-CoV-2. BMC Med 2022;20. [DOI: 10.1186/s12916-022-02252-0] [Reference Citation Analysis]
14 Rensen E, Pietropaoli S, Mueller F, Weber C, Souquere S, Sommer S, Isnard P, Rabant M, Gibier JB, Terzi F, Simon-Loriere E, Rameix-Welti MA, Pierron G, Barba-Spaeth G, Zimmer C. Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH. Life Sci Alliance 2022;5:e202101124. [PMID: 34996842 DOI: 10.26508/lsa.202101124] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 5.0] [Reference Citation Analysis]
15 Mollarasouli F, Bakirhan NK, Ozkan SA. Introduction to biomarkers. The Detection of Biomarkers 2022. [DOI: 10.1016/b978-0-12-822859-3.00008-0] [Reference Citation Analysis]
16 Leung HY, Yeung MHY, Leung WT, Wong KH, Tang WY, Cho WCS, Wong HT, Tsang HF, Wong YKE, Pei XM, Cheng HYL, Chan AKC, Wong SCC. The current and future applications of in situ hybridization technologies in anatomical pathology. Expert Rev Mol Diagn 2021;:1-14. [PMID: 34779317 DOI: 10.1080/14737159.2022.2007076] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
17 Freen-van Heeren JJ. Flow-FISH as a Tool for Studying Bacteria, Fungi and Viruses. BioTech 2021;10:21. [DOI: 10.3390/biotech10040021] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
18 Ukey R, Bruiners N, Mishra H, Mishra PK, McCloskey D, Onyuka A, Chen F, Pinter A, Weiskopf D, Sette A, Roy J, Gaur S, Gennaro ML. Dichotomy between the humoral and cellular responses elicited by mRNA and adenoviral vector vaccines against SARS-CoV-2. medRxiv 2021:2021. [PMID: 34580675 DOI: 10.1101/2021.09.17.21263528] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
19 Wittenstein T, Leibovich N, Hilfinger A. Quantifying biochemical reaction rates from static population variability within complex networks.. [DOI: 10.1101/2021.08.30.458258] [Reference Citation Analysis]
20 Huo L, Jiao Li J, Chen L, Yu Z, Hutvagner G, Li J. Single-cell multi-omics sequencing: application trends, COVID-19, data analysis issues and prospects. Brief Bioinform 2021:bbab229. [PMID: 34111889 DOI: 10.1093/bib/bbab229] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 3.0] [Reference Citation Analysis]
21 Rammohan J, Lund SP, Alperovich N, Paralanov V, Strychalski EA, Ross D. Comparison of bias and resolvability in single-cell and single-transcript methods. Commun Biol 2021;4:659. [PMID: 34079048 DOI: 10.1038/s42003-021-02138-6] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
22 Mishra PK, Bruiners N, Ukey R, Datta P, Onyuka A, Handler D, Hussain S, Honnen W, Singh S, Guerrini V, Yin Y, Dewald H, Choudhary A, Horton DB, Barrett ES, Roy J, Weiss SH, Fitzgerald-Bocarsly P, Blaser MJ, Carson JL, Panettieri RA Jr, Lardizabal A, Chang TL, Pinter A, Gennaro ML. Vaccination boosts protective responses and counters SARS-CoV-2-induced pathogenic memory B cells. medRxiv 2021:2021. [PMID: 33880486 DOI: 10.1101/2021.04.11.21255153] [Cited by in Crossref: 8] [Article Influence: 4.0] [Reference Citation Analysis]
23 Míguez B, Gullón P, Cotos-yáñez T, Massot-cladera M, Pérez-cano FJ, Vila C, Alonso JL. Manufacture and Prebiotic Potential of Xylooligosaccharides Derived From Eucalyptus nitens Wood. Front Chem Eng 2021;3:670440. [DOI: 10.3389/fceng.2021.670440] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.5] [Reference Citation Analysis]
24 Rossi A, Pacella I, Piconese S. RNA Flow Cytometry for the Study of T Cell Metabolism. Int J Mol Sci 2021;22:3906. [PMID: 33918901 DOI: 10.3390/ijms22083906] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
25 Ma J, Tran G, Wan AMD, Young EWK, Kumacheva E, Iscove NN, Zandstra PW. Microdroplet-based one-step RT-PCR for ultrahigh throughput single-cell multiplex gene expression analysis and rare cell detection. Sci Rep 2021;11:6777. [PMID: 33762663 DOI: 10.1038/s41598-021-86087-4] [Cited by in Crossref: 10] [Cited by in F6Publishing: 10] [Article Influence: 5.0] [Reference Citation Analysis]
26 Rensen E, Pietropaoli S, Mueller F, Weber C, Souquere S, Isnard P, Rabant M, Gibier J, Simon-loriere E, Rameix-welti M, Pierron G, Barba-spaeth G, Zimmer C. Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH.. [DOI: 10.1101/2021.02.04.429604] [Cited by in Crossref: 8] [Cited by in F6Publishing: 9] [Article Influence: 4.0] [Reference Citation Analysis]
27 Thompson HF, Summers S, Yuecel R, Gutierrez T. Hydrocarbon-Degrading Bacteria Found Tightly Associated with the 50-70 μm Cell-Size Population of Eukaryotic Phytoplankton in Surface Waters of a Northeast Atlantic Region. Microorganisms 2020;8:E1955. [PMID: 33317100 DOI: 10.3390/microorganisms8121955] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 1.7] [Reference Citation Analysis]
28 Agrati C, De Biasi S, Fidanza L, Gibellini L, Nasi M, Pinti M, Cossarizza A. The importance of advanced cytometry in defining new immune cell types and functions relevant for the immunopathogenesis of HIV infection. AIDS 2020;34:2169-85. [PMID: 32910071 DOI: 10.1097/QAD.0000000000002675] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
29 Vance GH, Khan WA. Utility of Fluorescence In Situ Hybridization in Clinical and Research Applications. Advances in Molecular Pathology 2020;3:65-75. [DOI: 10.1016/j.yamp.2020.07.006] [Reference Citation Analysis]
30 Zhao Y, Lin C, Wu P, Chen X, Zhao Y, Li Y, Chen L, Nilsson M, Ke R. Single Cell RNA Expression Analysis Using Flow Cytometry Based on Specific Probe Ligation and Rolling Circle Amplification. ACS Sens 2020;5:3031-6. [PMID: 32935538 DOI: 10.1021/acssensors.0c01569] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 1.3] [Reference Citation Analysis]
31 Radhakrishnan R, Kowluru RA. Long Noncoding RNA MALAT1 and Regulation of the Antioxidant Defense System in Diabetic Retinopathy. Diabetes 2021;70:227-39. [PMID: 33051272 DOI: 10.2337/db20-0375] [Cited by in Crossref: 34] [Cited by in F6Publishing: 38] [Article Influence: 11.3] [Reference Citation Analysis]
32 Rezk A, Li R, Bar-Or A. Multiplexed detection and isolation of viable low-frequency cytokine-secreting human B cells using cytokine secretion assay and flow cytometry (CSA-Flow). Sci Rep 2020;10:14823. [PMID: 32908164 DOI: 10.1038/s41598-020-71750-z] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 1.3] [Reference Citation Analysis]
33 Uno N, Kaku N, Morinaga Y, Hasegawa H, Yanagihara K. Flow cytometry assay for the detection of single-copy DNA in human lymphocytes. Nucleic Acids Res 2020;48:e86. [PMID: 32544240 DOI: 10.1093/nar/gkaa515] [Reference Citation Analysis]
34 Batish M, Tyagi S. Fluorescence In Situ Imaging of Dendritic RNAs at Single-Molecule Resolution. Curr Protoc Neurosci 2019;89:e79. [PMID: 31532916 DOI: 10.1002/cpns.79] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 1.7] [Reference Citation Analysis]
35 Lin WN, Tay MZ, Lu R, Liu Y, Chen CH, Cheow LF. The Role of Single-Cell Technology in the Study and Control of Infectious Diseases. Cells 2020;9:E1440. [PMID: 32531928 DOI: 10.3390/cells9061440] [Cited by in Crossref: 11] [Cited by in F6Publishing: 11] [Article Influence: 3.7] [Reference Citation Analysis]
36 Raddaoui N, Croce S, Geiger F, Borodavka A, Möckl L, Stazzoni S, Viverge B, Bräuchle C, Frischmuth T, Engelke H, Carell T. Supersensitive Multifluorophore RNA-FISH for Early Virus Detection and Flow-FISH by Using Click Chemistry. Chembiochem 2020;21:2214-8. [PMID: 32187837 DOI: 10.1002/cbic.202000081] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 1.0] [Reference Citation Analysis]
37 Young AP, Jackson DJ, Wyeth RC. A technical review and guide to RNA fluorescence in situ hybridization. PeerJ 2020;8:e8806. [PMID: 32219032 DOI: 10.7717/peerj.8806] [Cited by in Crossref: 32] [Cited by in F6Publishing: 34] [Article Influence: 10.7] [Reference Citation Analysis]
38 Real F, Capron C, Sennepin A, Arrigucci R, Zhu A, Sannier G, Zheng J, Xu L, Massé J, Greffe S, Cazabat M, Donoso M, Delobel P, Izopet J, Eugenin E, Gennaro ML, Rouveix E, Cramer Bordé E, Bomsel M. Platelets from HIV-infected individuals on antiretroviral drug therapy with poor CD4 + T cell recovery can harbor replication-competent HIV despite viral suppression. Sci Transl Med 2020;12:eaat6263. [DOI: 10.1126/scitranslmed.aat6263] [Cited by in Crossref: 38] [Cited by in F6Publishing: 39] [Article Influence: 12.7] [Reference Citation Analysis]
39 M Weerakoon-Ratnayake K, Vaidyanathan S, Larky N, Dathathreya K, Hu M, Jose J, Mog S, August K, K Godwin A, L Hupert M, A Witek M, A Soper S. Microfluidic Device for On-Chip Immunophenotyping and Cytogenetic Analysis of Rare Biological Cells. Cells 2020;9:E519. [PMID: 32102446 DOI: 10.3390/cells9020519] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 1.3] [Reference Citation Analysis]
40 Xu H, Wang X, Wang Z, Li J, Xu Z, Miao M, Chen G, Lei X, Wu J, Shi H, Wang K, Zhang T, Sun X. MicroRNA expression profile analysis in sperm reveals hsa-mir-191 as an auspicious omen of in vitro fertilization. BMC Genomics 2020;21:165. [PMID: 32066367 DOI: 10.1186/s12864-020-6570-8] [Cited by in Crossref: 27] [Cited by in F6Publishing: 30] [Article Influence: 9.0] [Reference Citation Analysis]
41 Wang S, Khan A, Huang R, Ye S, Di K, Xiong T, Li Z. Recent advances in single extracellular vesicle detection methods. Biosens Bioelectron 2020;154:112056. [PMID: 32093894 DOI: 10.1016/j.bios.2020.112056] [Cited by in Crossref: 36] [Cited by in F6Publishing: 29] [Article Influence: 12.0] [Reference Citation Analysis]
42 Xu C, He XY, Peng Y, Dai BS, Liu BY, Cheng SX. Facile Strategy To Enhance Specificity and Sensitivity of Molecular Beacons by an Aptamer-Functionalized Delivery Vector. Anal Chem 2020;92:2088-96. [PMID: 31855408 DOI: 10.1021/acs.analchem.9b04596] [Cited by in Crossref: 21] [Cited by in F6Publishing: 22] [Article Influence: 7.0] [Reference Citation Analysis]
43 Bahrudeen MNM, Chauhan V, Palma CSD, Oliveira SMD, Kandavalli VK, Ribeiro AS. Estimating RNA numbers in single cells by RNA fluorescent tagging and flow cytometry. J Microbiol Methods 2019;166:105745. [PMID: 31654657 DOI: 10.1016/j.mimet.2019.105745] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 1.5] [Reference Citation Analysis]
44 Loiseau C, Cooper MM, Doolan DL. Deciphering host immunity to malaria using systems immunology. Immunol Rev 2020;293:115-43. [PMID: 31608461 DOI: 10.1111/imr.12814] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 2.3] [Reference Citation Analysis]
45 Ye X, Zhao Y, Karijolich J. The landscape of transcription initiation across latent and lytic KSHV genomes. PLoS Pathog 2019;15:e1007852. [PMID: 31188901 DOI: 10.1371/journal.ppat.1007852] [Cited by in Crossref: 7] [Cited by in F6Publishing: 7] [Article Influence: 1.8] [Reference Citation Analysis]
46 Lin M, Yi X, Huang F, Ma X, Zuo X, Xia F. Photoactivated Nanoflares for mRNA Detection in Single Living Cells. Anal Chem 2019;91:2021-7. [DOI: 10.1021/acs.analchem.8b04434] [Cited by in Crossref: 23] [Cited by in F6Publishing: 24] [Article Influence: 5.8] [Reference Citation Analysis]
47 Xu AM, Liu Q, Takata KL, Jeoung S, Su Y, Antoshechkin I, Chen S, Thomson M, Heath JR. Integrated measurement of intracellular proteins and transcripts in single cells. Lab Chip 2018;18:3251-62. [PMID: 30178802 DOI: 10.1039/c8lc00639c] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 2.3] [Reference Citation Analysis]
48 Buriani A, Fortinguerra S, Sorrenti V, Gabbia D, Carrara M. Single-Cell Omics in Personalized Medicine. Single-Cell Omics 2019. [DOI: 10.1016/b978-0-12-817532-3.00014-1] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
49 Farack L, Golan M, Egozi A, Dezorella N, Bahar Halpern K, Ben-Moshe S, Garzilli I, Tóth B, Roitman L, Krizhanovsky V, Itzkovitz S. Transcriptional Heterogeneity of Beta Cells in the Intact Pancreas. Dev Cell 2019;48:115-125.e4. [PMID: 30503750 DOI: 10.1016/j.devcel.2018.11.001] [Cited by in Crossref: 52] [Cited by in F6Publishing: 55] [Article Influence: 10.4] [Reference Citation Analysis]
50 Zhao Y, Ye X, Dunker W, Song Y, Karijolich J. RIG-I like receptor sensing of host RNAs facilitates the cell-intrinsic immune response to KSHV infection. Nat Commun 2018;9:4841. [PMID: 30451863 DOI: 10.1038/s41467-018-07314-7] [Cited by in Crossref: 79] [Cited by in F6Publishing: 85] [Article Influence: 15.8] [Reference Citation Analysis]
51 Prudent E, Raoult D. Fluorescence in situ hybridization, a complementary molecular tool for the clinical diagnosis of infectious diseases by intracellular and fastidious bacteria. FEMS Microbiology Reviews 2018;43:88-107. [DOI: 10.1093/femsre/fuy040] [Cited by in Crossref: 26] [Cited by in F6Publishing: 27] [Article Influence: 5.2] [Reference Citation Analysis]
52 Arrigucci R, Lakehal K, Vir P, Handler D, Davidow AL, Herrera R, Estrada-Guzmán JD, Bushkin Y, Tyagi S, Lardizabal AA, Gennaro ML. Active Tuberculosis Is Characterized by Highly Differentiated Effector Memory Th1 Cells. Front Immunol 2018;9:2127. [PMID: 30283456 DOI: 10.3389/fimmu.2018.02127] [Cited by in Crossref: 16] [Cited by in F6Publishing: 19] [Article Influence: 3.2] [Reference Citation Analysis]
53 Dhuppar S, Mazumder A. Measuring cell cycle-dependent DNA damage responses and p53 regulation on a cell-by-cell basis from image analysis. Cell Cycle 2018;17:1358-71. [PMID: 29963960 DOI: 10.1080/15384101.2018.1482136] [Cited by in Crossref: 13] [Cited by in F6Publishing: 7] [Article Influence: 2.6] [Reference Citation Analysis]
54 Huang F, Lin M, Duan R, Lou X, Xia F, Willner I. Photoactivated Specific mRNA Detection in Single Living Cells by Coupling "Signal-on" Fluorescence and "Signal-off" Electrochemical Signals. Nano Lett 2018;18:5116-23. [PMID: 29998736 DOI: 10.1021/acs.nanolett.8b02004] [Cited by in Crossref: 39] [Cited by in F6Publishing: 40] [Article Influence: 7.8] [Reference Citation Analysis]
55 Gao R, Hao C, Xu L, Xu C, Kuang H. Spiny Nanorod and Upconversion Nanoparticle Satellite Assemblies for Ultrasensitive Detection of Messenger RNA in Living Cells. Anal Chem 2018;90:5414-21. [PMID: 29577726 DOI: 10.1021/acs.analchem.8b00617] [Cited by in Crossref: 52] [Cited by in F6Publishing: 54] [Article Influence: 10.4] [Reference Citation Analysis]