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For: Betancourt LH, Sanchez A, Pla I, Kuras M, Zhou Q, Andersson R, Marko-Varga G. Quantitative Assessment of Urea In-Solution Lys-C/Trypsin Digestions Reveals Superior Performance at Room Temperature over Traditional Proteolysis at 37 °C. J Proteome Res 2018;17:2556-61. [PMID: 29812944 DOI: 10.1021/acs.jproteome.8b00228] [Cited by in Crossref: 16] [Cited by in F6Publishing: 16] [Article Influence: 4.0] [Reference Citation Analysis]
Number Citing Articles
1 [DOI: 10.1101/393249] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
2 Wiśniewski JR. Filter Aided Sample Preparation - A tutorial. Anal Chim Acta 2019;1090:23-30. [PMID: 31655642 DOI: 10.1016/j.aca.2019.08.032] [Cited by in Crossref: 19] [Cited by in F6Publishing: 14] [Article Influence: 6.3] [Reference Citation Analysis]
3 Sequeira VM, Vermeulen M. Identifying Protein-(Hydroxy)Methylated DNA Interactions Using Quantitative Interaction Proteomics. Methods Mol Biol 2021;2272:209-24. [PMID: 34009616 DOI: 10.1007/978-1-0716-1294-1_12] [Reference Citation Analysis]
4 Hakobyan A, Schneider MB, Liesack W, Glatter T. Efficient Tandem LysC/Trypsin Digestion in Detergent Conditions. Proteomics 2019;19:1900136. [DOI: 10.1002/pmic.201900136] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 0.7] [Reference Citation Analysis]
5 Betancourt LH, Gil J, Sanchez A, Doma V, Kuras M, Murillo JR, Velasquez E, Çakır U, Kim Y, Sugihara Y, Parada IP, Szeitz B, Appelqvist R, Wieslander E, Welinder C, de Almeida NP, Woldmar N, Marko-Varga M, Eriksson J, Pawłowski K, Baldetorp B, Ingvar C, Olsson H, Lundgren L, Lindberg H, Oskolas H, Lee B, Berge E, Sjögren M, Eriksson C, Kim D, Kwon HJ, Knudsen B, Rezeli M, Malm J, Hong R, Horvath P, Szász AM, Tímár J, Kárpáti S, Horvatovich P, Miliotis T, Nishimura T, Kato H, Steinfelder E, Oppermann M, Miller K, Florindi F, Zhou Q, Domont GB, Pizzatti L, Nogueira FCS, Szadai L, Németh IB, Ekedahl H, Fenyö D, Marko-Varga G. The Human Melanoma Proteome Atlas-Complementing the melanoma transcriptome. Clin Transl Med 2021;11:e451. [PMID: 34323402 DOI: 10.1002/ctm2.451] [Reference Citation Analysis]
6 Dapic I, Baljeu‐neuman L, Uwugiaren N, Kers J, Goodlett DR, Corthals GL. Proteome analysis of tissues by mass spectrometry. Mass Spec Rev 2019;38:403-41. [DOI: 10.1002/mas.21598] [Cited by in Crossref: 10] [Cited by in F6Publishing: 8] [Article Influence: 3.3] [Reference Citation Analysis]
7 Dagley LF, Infusini G, Larsen RH, Sandow JJ, Webb AI. Universal Solid-Phase Protein Preparation (USP 3 ) for Bottom-up and Top-down Proteomics. J Proteome Res 2019;18:2915-24. [DOI: 10.1021/acs.jproteome.9b00217] [Cited by in Crossref: 21] [Cited by in F6Publishing: 18] [Article Influence: 7.0] [Reference Citation Analysis]
8 Kulyyassov A, Fresnais M, Longuespée R. Targeted liquid chromatography-tandem mass spectrometry analysis of proteins: Basic principles, applications, and perspectives. Proteomics 2021;:e2100153. [PMID: 34591362 DOI: 10.1002/pmic.202100153] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
9 Jankovskaja S, Kamiie J, Rezeli M, Gustavsson L, Sugihara Y, Miliotis T, Ruzgas T, Marko-Varga G. Optimization of sample preparation for transporter protein quantification in tissues by LC-MS/MS. J Pharm Biomed Anal 2019;164:9-15. [PMID: 30339949 DOI: 10.1016/j.jpba.2018.10.013] [Reference Citation Analysis]
10 Betancourt LH, Gil J, Kim Y, Doma V, Çakır U, Sanchez A, Murillo JR, Kuras M, Parada IP, Sugihara Y, Appelqvist R, Wieslander E, Welinder C, Velasquez E, de Almeida NP, Woldmar N, Marko-Varga M, Pawłowski K, Eriksson J, Szeitz B, Baldetorp B, Ingvar C, Olsson H, Lundgren L, Lindberg H, Oskolas H, Lee B, Berge E, Sjögren M, Eriksson C, Kim D, Kwon HJ, Knudsen B, Rezeli M, Hong R, Horvatovich P, Miliotis T, Nishimura T, Kato H, Steinfelder E, Oppermann M, Miller K, Florindi F, Zhou Q, Domont GB, Pizzatti L, Nogueira FCS, Horvath P, Szadai L, Tímár J, Kárpáti S, Szász AM, Malm J, Fenyö D, Ekedahl H, Németh IB, Marko-Varga G. The human melanoma proteome atlas-Defining the molecular pathology. Clin Transl Med 2021;11:e473. [PMID: 34323403 DOI: 10.1002/ctm2.473] [Reference Citation Analysis]
11 Kumari M, Anji A. Urea can inhibit efficient reduction and alkylation of protein dimers in solution demonstrated by the beta subunit of alpha glucosidase II. Anal Biochem 2019;566:20-2. [PMID: 30312619 DOI: 10.1016/j.ab.2018.10.008] [Reference Citation Analysis]
12 Wu R, Pai A, Liu L, Xing S, Lu Y. NanoTPOT: Enhanced Sample Preparation for Quantitative Nanoproteomic Analysis. Anal Chem 2020;92:6235-40. [PMID: 32255623 DOI: 10.1021/acs.analchem.0c00077] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
13 Doellinger J, Schneider A, Hoeller M, Lasch P. Sample Preparation by Easy Extraction and Digestion (SPEED) - A Universal, Rapid, and Detergent-free Protocol for Proteomics Based on Acid Extraction. Mol Cell Proteomics 2020;19:209-22. [PMID: 31754045 DOI: 10.1074/mcp.TIR119.001616] [Cited by in Crossref: 29] [Cited by in F6Publishing: 7] [Article Influence: 9.7] [Reference Citation Analysis]
14 Fan KT, Wang KH, Chang WH, Yang JC, Yeh CF, Cheng KT, Hung SC, Chen YR. Application of Data-Independent Acquisition Approach to Study the Proteome Change from Early to Later Phases of Tomato Pathogenesis Responses. Int J Mol Sci 2019;20:E863. [PMID: 30781546 DOI: 10.3390/ijms20040863] [Cited by in Crossref: 8] [Cited by in F6Publishing: 8] [Article Influence: 2.7] [Reference Citation Analysis]
15 Kitata RB, Choong WK, Tsai CF, Lin PY, Chen BS, Chang YC, Nesvizhskii AI, Sung TY, Chen YJ. A data-independent acquisition-based global phosphoproteomics system enables deep profiling. Nat Commun 2021;12:2539. [PMID: 33953186 DOI: 10.1038/s41467-021-22759-z] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
16 Kuras M, Betancourt LH, Rezeli M, Rodriguez J, Szasz M, Zhou Q, Miliotis T, Andersson R, Marko-Varga G. Assessing Automated Sample Preparation Technologies for High-Throughput Proteomics of Frozen Well Characterized Tissues from Swedish Biobanks. J Proteome Res 2019;18:548-56. [PMID: 30462917 DOI: 10.1021/acs.jproteome.8b00792] [Cited by in Crossref: 6] [Cited by in F6Publishing: 9] [Article Influence: 1.5] [Reference Citation Analysis]
17 Wåhlén K, Yan H, Welinder C, Ernberg M, Kosek E, Mannerkorpi K, Gerdle B, Ghafouri B. Proteomic Investigation in Plasma from Women with Fibromyalgia in Response to a 15-wk Resistance Exercise Intervention. Med Sci Sports Exerc 2022;54:232-46. [PMID: 35029590 DOI: 10.1249/MSS.0000000000002790] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
18 Kulyyassov A, Ogryzko V. In Vivo Quantitative Estimation of DNA-Dependent Interaction of Sox2 and Oct4 Using BirA-Catalyzed Site-Specific Biotinylation. Biomolecules 2020;10:E142. [PMID: 31963153 DOI: 10.3390/biom10010142] [Cited by in Crossref: 3] [Article Influence: 1.5] [Reference Citation Analysis]
19 Gonzalez-Gil A, Porell RN, Fernandes SM, Maenpaa E, August Li T, Li T, Wong PC, Aoki K, Tiemeyer M, Yu ZJ, Orsburn BC, Bumpus NN, Matthews RT, Schnaar RL. Human brain sialoglycan ligand for CD33, a microglial inhibitory Siglec implicated in Alzheimer's disease. J Biol Chem 2022;:101960. [PMID: 35452678 DOI: 10.1016/j.jbc.2022.101960] [Reference Citation Analysis]