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Cited by in F6Publishing
For: Karagiannis K, Simonyan V, Mazumder R. SNVDis: a proteome-wide analysis service for evaluating nsSNVs in protein functional sites and pathways. Genomics Proteomics Bioinformatics 2013;11:122-6. [PMID: 23618375 DOI: 10.1016/j.gpb.2012.10.003] [Cited by in Crossref: 13] [Cited by in F6Publishing: 10] [Article Influence: 1.3] [Reference Citation Analysis]
Number Citing Articles
1 Cole C, Krampis K, Karagiannis K, Almeida JS, Faison WJ, Motwani M, Wan Q, Golikov A, Pan Y, Simonyan V, Mazumder R. Non-synonymous variations in cancer and their effects on the human proteome: workflow for NGS data biocuration and proteome-wide analysis of TCGA data. BMC Bioinformatics 2014;15:28. [PMID: 24467687 DOI: 10.1186/1471-2105-15-28] [Cited by in Crossref: 11] [Cited by in F6Publishing: 9] [Article Influence: 1.4] [Reference Citation Analysis]
2 Pan Y, Karagiannis K, Zhang H, Dingerdissen H, Shamsaddini A, Wan Q, Simonyan V, Mazumder R. Human germline and pan-cancer variomes and their distinct functional profiles. Nucleic Acids Res 2014;42:11570-88. [PMID: 25232094 DOI: 10.1093/nar/gku772] [Cited by in Crossref: 19] [Cited by in F6Publishing: 19] [Article Influence: 2.4] [Reference Citation Analysis]
3 Wu TJ, Shamsaddini A, Pan Y, Smith K, Crichton DJ, Simonyan V, Mazumder R. A framework for organizing cancer-related variations from existing databases, publications and NGS data using a High-performance Integrated Virtual Environment (HIVE). Database (Oxford) 2014;2014:bau022. [PMID: 24667251 DOI: 10.1093/database/bau022] [Cited by in Crossref: 48] [Cited by in F6Publishing: 43] [Article Influence: 6.0] [Reference Citation Analysis]
4 Sun B, Zhang M, Cui P, Li H, Jia J, Li Y, Xie L. Nonsynonymous Single-Nucleotide Variations on Some Posttranslational Modifications of Human Proteins and the Association with Diseases. Comput Math Methods Med 2015;2015:124630. [PMID: 26495027 DOI: 10.1155/2015/124630] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 0.4] [Reference Citation Analysis]
5 Santana-Quintero L, Dingerdissen H, Thierry-Mieg J, Mazumder R, Simonyan V. HIVE-hexagon: high-performance, parallelized sequence alignment for next-generation sequencing data analysis. PLoS One 2014;9:e99033. [PMID: 24918764 DOI: 10.1371/journal.pone.0099033] [Cited by in Crossref: 27] [Cited by in F6Publishing: 20] [Article Influence: 3.4] [Reference Citation Analysis]
6 Dingerdissen H, Weaver DS, Karp PD, Pan Y, Simonyan V, Mazumder R. A framework for application of metabolic modeling in yeast to predict the effects of nsSNV in human orthologs. Biol Direct 2014;9:9. [PMID: 24894379 DOI: 10.1186/1745-6150-9-9] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.1] [Reference Citation Analysis]
7 Simonyan V, Mazumder R. High-Performance Integrated Virtual Environment (HIVE) Tools and Applications for Big Data Analysis. Genes (Basel) 2014;5:957-81. [PMID: 25271953 DOI: 10.3390/genes5040957] [Cited by in Crossref: 44] [Cited by in F6Publishing: 36] [Article Influence: 5.5] [Reference Citation Analysis]
8 Chang TC, Goud S, Torcivia-Rodriguez J, Hu Y, Pan Q, Kahsay R, Blomberg J, Mazumder R. Investigation of somatic single nucleotide variations in human endogenous retrovirus elements and their potential association with cancer. PLoS One 2019;14:e0213770. [PMID: 30934003 DOI: 10.1371/journal.pone.0213770] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
9 Abunimer A, Smith K, Wu TJ, Lam P, Simonyan V, Mazumder R. Single-nucleotide variations in cardiac arrhythmias: prospects for genomics and proteomics based biomarker discovery and diagnostics. Genes (Basel) 2014;5:254-69. [PMID: 24705329 DOI: 10.3390/genes5020254] [Cited by in Crossref: 9] [Cited by in F6Publishing: 7] [Article Influence: 1.1] [Reference Citation Analysis]
10 Torcivia JP, Mazumder R. Scanning window analysis of non-coding regions within normal-tumor whole-genome sequence samples. Brief Bioinform 2021;22:bbaa203. [PMID: 32940334 DOI: 10.1093/bib/bbaa203] [Reference Citation Analysis]