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For: Emenecker RJ, Griffith D, Holehouse AS. Metapredict: a fast, accurate, and easy-to-use predictor of consensus disorder and structure. Biophys J 2021;120:4312-9. [PMID: 34480923 DOI: 10.1016/j.bpj.2021.08.039] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
Number Citing Articles
1 Avery C, Patterson J, Grear T, Frater T, Jacobs DJ. Protein Function Analysis through Machine Learning. Biomolecules 2022;12:1246. [DOI: 10.3390/biom12091246] [Reference Citation Analysis]
2 Han Y, Wennersten SA, Wright JM, Ludwig RW, Lau E, Lam MPY. Proteogenomics reveals sex biased aging genes and coordinated splicing in cardiac aging. Am J Physiol Heart Circ Physiol 2022. [PMID: 35930447 DOI: 10.1152/ajpheart.00244.2022] [Reference Citation Analysis]
3 Baughman HE, Narang D, Chen W, Villagrán Suárez AC, Lee J, Bachochin MJ, Gunther TR, Wolynes PG, Komives EA. An intrinsically disordered transcription activation domain increases the DNA binding affinity and reduces the specificity of NFκB p50/RelA. Journal of Biological Chemistry 2022. [DOI: 10.1016/j.jbc.2022.102349] [Reference Citation Analysis]
4 Banani SF, Afeyan LK, Hawken SW, Henninger JE, Dall'Agnese A, Clark VE, Platt JM, Oksuz O, Hannett NM, Sagi I, Lee TI, Young RA. Genetic variation associated with condensate dysregulation in disease. Dev Cell 2022;57:1776-1788.e8. [PMID: 35809564 DOI: 10.1016/j.devcel.2022.06.010] [Cited by in Crossref: 5] [Article Influence: 5.0] [Reference Citation Analysis]
5 Mignon J, Mottet D, Leyder T, Uversky VN, Perpète EA, Michaux C. Structural characterisation of amyloidogenic intrinsically disordered zinc finger protein isoforms DPF3b and DPF3a. Int J Biol Macromol 2022;218:57-71. [PMID: 35863661 DOI: 10.1016/j.ijbiomac.2022.07.102] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
6 LaPeruta AJ, Micic J, Woolford JL Jr. Additional principles that govern the release of pre-ribosomes from the nucleolus into the nucleoplasm in yeast. Nucleic Acids Res 2022:gkac430. [PMID: 35736211 DOI: 10.1093/nar/gkac430] [Reference Citation Analysis]
7 Cho NH, Cheveralls KC, Brunner AD, Kim K, Michaelis AC, Raghavan P, Kobayashi H, Savy L, Li JY, Canaj H, Kim JYS, Stewart EM, Gnann C, McCarthy F, Cabrera JP, Brunetti RM, Chhun BB, Dingle G, Hein MY, Huang B, Mehta SB, Weissman JS, Gómez-Sjöberg R, Itzhak DN, Royer LA, Mann M, Leonetti MD. OpenCell: Endogenous tagging for the cartography of human cellular organization. Science 2022;375:eabi6983. [PMID: 35271311 DOI: 10.1126/science.abi6983] [Cited by in Crossref: 25] [Cited by in F6Publishing: 9] [Article Influence: 25.0] [Reference Citation Analysis]
8 Zhao B, Kurgan L. Deep Learning in Prediction of Intrinsic Disorder in Proteins. Computational and Structural Biotechnology Journal 2022. [DOI: 10.1016/j.csbj.2022.03.003] [Cited by in Crossref: 4] [Article Influence: 4.0] [Reference Citation Analysis]
9 Kurgan L. Resources for computational prediction of intrinsic disorder in proteins. Methods 2022. [DOI: 10.1016/j.ymeth.2022.03.018] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 2.0] [Reference Citation Analysis]
10 Zhao B, Kurgan L. Surveying over 100 predictors of intrinsic disorder in proteins. Expert Rev Proteomics 2021;:1-11. [PMID: 34894985 DOI: 10.1080/14789450.2021.2018304] [Reference Citation Analysis]
11 Holehouse AS, Ginell GM, Griffith D, Böke E. Clustering of Aromatic Residues in Prion-like Domains Can Tune the Formation, State, and Organization of Biomolecular Condensates. Biochemistry 2021;60:3566-81. [PMID: 34784177 DOI: 10.1021/acs.biochem.1c00465] [Reference Citation Analysis]
12 Paiz EA, Allen JH, Correia JJ, Fitzkee NC, Hough LE, Whitten ST. Beta turn propensity and a model polymer scaling exponent identify intrinsically disordered phase-separating proteins. J Biol Chem 2021;297:101343. [PMID: 34710373 DOI: 10.1016/j.jbc.2021.101343] [Reference Citation Analysis]
13 Sankaranarayanan M, Emenecker RJ, Wilby EL, Jahnel M, Trussina IREA, Wayland M, Alberti S, Holehouse AS, Weil TT. Adaptable P body physical states differentially regulate bicoid mRNA storage during early Drosophila development. Dev Cell 2021;56:2886-2901.e6. [PMID: 34655524 DOI: 10.1016/j.devcel.2021.09.021] [Reference Citation Analysis]
14 Griffith D, Holehouse AS. PARROT is a flexible recurrent neural network framework for analysis of large protein datasets. Elife 2021;10:e70576. [PMID: 34533455 DOI: 10.7554/eLife.70576] [Cited by in F6Publishing: 1] [Reference Citation Analysis]