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For: Gaci N, Borrel G, Tottey W, O’Toole PW, Brugère JF. Archaea and the human gut: New beginning of an old story. World J Gastroenterol 2014; 20(43): 16062-16078 [PMID: 25473158 DOI: 10.3748/wjg.v20.i43.16062]
URL: https://www.wjgnet.com/1007-9327/full/v20/i43/16062.htm
Number Citing Articles
1
Mateus Laguardia-Nascimento, Kelly Moreira Grillo Ribeiro Branco, Marcela Ribeiro Gasparini, Silvia Giannattasio-Ferraz, Laura Rabelo Leite, Flávio Marcos Gomes Araujo, Anna Christina de Matos Salim, Jacques Robert Nicoli, Guilherme Corrêa de Oliveira, Edel Figueiredo Barbosa-Stancioli, Ramy K. Aziz. Vaginal Microbiome Characterization of Nellore Cattle Using Metagenomic AnalysisPLOS ONE 2015; 10(11): e0143294 doi: 10.1371/journal.pone.0143294
2
Lan Zhao, William C.S. Cho, Jun-Li Luo. Exploring the patient-microbiome interaction patterns for pan-cancerComputational and Structural Biotechnology Journal 2022; 20: 3068 doi: 10.1016/j.csbj.2022.06.012
3
A. Krawczyk, T. Gosiewski, B. Zapała, K. Kowalska-Duplaga, D. Salamon. Alterations in intestinal Archaea composition in pediatric patients with Crohn’s disease based on next-generation sequencing – a pilot studyGut Microbes 2023; 15(2) doi: 10.1080/19490976.2023.2276806
4
Abhijit Rathi, Tejal Gaonkar, Debojyoti Dhar, Gopalakrishna Kallapura, Swati Jadhav. Study of amino acids absorption and gut microbiome on consumption of pea protein blended with enzymes-probiotics supplementFrontiers in Nutrition 2024; 11 doi: 10.3389/fnut.2024.1307734
5
Jean Paul Cerna-Vargas, Vadim M. Gumerov, Tino Krell, Igor B. Zhulin. Amine-recognizing domain in diverse receptors from bacteria and archaea evolved from the universal amino acid sensorProceedings of the National Academy of Sciences 2023; 120(42) doi: 10.1073/pnas.2305837120
6
Rosario Lucas López, María José Grande Burgos, Antonio Gálvez, Rubén Pérez Pulido. The human gastrointestinal tract and oral microbiota in inflammatory bowel disease: a state of the science reviewAPMIS 2017; 125(1): 3 doi: 10.1111/apm.12609
7
Christoph Hoegenauer, Heinz F. Hammer, Alexander Mahnert, Christine Moissl-Eichinger. Methanogenic archaea in the human gastrointestinal tractNature Reviews Gastroenterology & Hepatology 2022; 19(12): 805 doi: 10.1038/s41575-022-00673-z
8
Sonja Vanderhaeghen, Christophe Lacroix, Clarissa Schwab, Abelardo Margolles. Methanogen communities in stools of humans of different age and health status and co-occurrence with bacteriaFEMS Microbiology Letters 2015; 362(13): fnv092 doi: 10.1093/femsle/fnv092
9
Alexander K. Umbach, Ashley A. Stegelmeier, Josh D. Neufeld, Carla Porto. Archaea Are Rare and Uncommon Members of the Mammalian Skin MicrobiomemSystems 2021; 6(4) doi: 10.1128/mSystems.00642-21
10
Enriqueta Garcia-Gutierrez, Lizbeth Sayavedra. Comprehensive Gut Microbiota2022; : 69 doi: 10.1016/B978-0-12-819265-8.00089-9
11
Ruchi Mathur, Gillian M Barlow. Obesity and the microbiomeExpert Review of Gastroenterology & Hepatology 2015; 9(8): 1087 doi: 10.1586/17474124.2015.1051029
12
Sebastian D. Burz, Magali Monnoye, Catherine Philippe, William Farin, Vlad Ratziu, Francesco Strozzi, Jean-Michel Paillarse, Laurent Chêne, Hervé M. Blottière, Philippe Gérard. Fecal Microbiota Transplant from Human to Mice Gives Insights into the Role of the Gut Microbiota in Non-Alcoholic Fatty Liver Disease (NAFLD)Microorganisms 2021; 9(1): 199 doi: 10.3390/microorganisms9010199
13
Saber Khelaifia, Pilliol Virginie, Souad Belkacemi, Herve Tassery, Elodie Terrer, Gérard Aboudharam. Culturing the Human Oral Microbiota, Updating Methodologies and Cultivation TechniquesMicroorganisms 2023; 11(4): 836 doi: 10.3390/microorganisms11040836
14
Oleg S. Medvedev, Anastasiia Yu. Ivanova, Margarita A. Belousova, Stepan V. Toshchakov, Anastasia S. Krylova, Ivan V. Shirokov, Olga N. Obolenskaya, Tatiana A. Kuropatkina, Grigorii N. Bondarenko, Ilya B. Gartseev. Molecular Hydrogen in Health and DiseaseAdvances in Biochemistry in Health and Disease 2024; 27: 339 doi: 10.1007/978-3-031-47375-3_20
15
Prem Prashant Chaudhary, Nadia Gaci, Guillaume Borrel, Paul W. O’Toole, Jean-François Brugère. Molecular methods for studying methanogens of the human gastrointestinal tract: current status and future directionsApplied Microbiology and Biotechnology 2015; 99(14): 5801 doi: 10.1007/s00253-015-6739-2
16
Beata Tokarz-Deptuła, Paulina Dudziak, Natalia Gurgacz, Wiesław Deptuła. Mikrobiom Przewodu Pokarmowego Człowieka – Wybrane DanePostępy Mikrobiologii - Advancements of Microbiology 2022; 61(4): 223 doi: 10.2478/am-2022-023
17
Cynthia Maria Chibani, Alexander Mahnert, Guillaume Borrel, Alexandre Almeida, Almut Werner, Jean-François Brugère, Simonetta Gribaldo, Robert D. Finn, Ruth A. Schmitz, Christine Moissl-Eichinger. A catalogue of 1,167 genomes from the human gut archaeomeNature Microbiology 2021; 7(1): 48 doi: 10.1038/s41564-021-01020-9
18
Ami Diakite, Grégory Dubourg, Didier Raoult. Updating the repertoire of cultured bacteria from the human beingMicrobial Pathogenesis 2021; 150: 104698 doi: 10.1016/j.micpath.2020.104698
19
Agata Anna Cisek, Edyta Szymańska, Tamara Aleksandrzak-Piekarczyk, Bożena Cukrowska. The Role of Methanogenic Archaea in Inflammatory Bowel Disease—A ReviewJournal of Personalized Medicine 2024; 14(2): 196 doi: 10.3390/jpm14020196
20
Shrikant S. Bhute, Saroj S. Ghaskadbi, Yogesh S. Shouche. Mining of Microbial Wealth and MetaGenomics2017; : 133 doi: 10.1007/978-981-10-5708-3_8
21
Zainab Alyousif, Daniela Rivero Mendoza, Jérémie Auger, Vanessa De Carvalho, Samantha Amos, Charles Sims, Wendy J Dahl. Gastrointestinal Tolerance and Microbiome Response to Snacks Fortified with Pea Hull Fiber: A Randomized Trial in Older AdultsCurrent Developments in Nutrition 2020; 4(2): nzaa005 doi: 10.1093/cdn/nzaa005
22
Maximilian Mora, Alexandra Perras, Tatiana A. Alekhova, Lisa Wink, Robert Krause, Alina Aleksandrova, Tatiana Novozhilova, Christine Moissl-Eichinger. Resilient microorganisms in dust samples of the International Space Station—survival of the adaptation specialistsMicrobiome 2016; 4(1) doi: 10.1186/s40168-016-0217-7
23
J.M.W. Wong, E.M. Comelli, C.W.C. Kendall, J.L. Sievenpiper, J.C. Noronha, D.J.A. Jenkins. The Microbiota in Gastrointestinal Pathophysiology2017; : 187 doi: 10.1016/B978-0-12-804024-9.00022-7
24
Burkhardt Flemer, Nadia Gaci, Guillaume Borrel, Ian R. Sanderson, Prem P. Chaudhary, William Tottey, Paul W. O'Toole, Jean-François Brugère. Fecal microbiota variation across the lifespan of the healthy laboratory ratGut Microbes 2017; 8(5): 428 doi: 10.1080/19490976.2017.1334033
25
Alexey S. Syutkin, Marleen van Wolferen, Alexey K. Surin, Sonja‐Verena Albers, Mikhail G. Pyatibratov, Oleg V. Fedorov, Tessa E. F. Quax. Salt‐dependent regulation of archaellins in Haloarcula marismortuiMicrobiologyOpen 2019; 8(5) doi: 10.1002/mbo3.718
26
Nicholas D. Youngblut, Georg H. Reischer, Silke Dauser, Sophie Maisch, Chris Walzer, Gabrielle Stalder, Andreas H. Farnleitner, Ruth E. Ley. Vertebrate host phylogeny influences gut archaeal diversityNature Microbiology 2021; 6(11): 1443 doi: 10.1038/s41564-021-00980-2
27
Cristian Morales, Gabriel Rojas, Camilo Rebolledo, Marcelo Rojas-Herrera, Raúl Arias-Carrasco, Sara Cuadros-Orellana, Vinicius Maracaja-Coutinho, Kathleen Saavedra, Pamela Leal, Fernando Lanas, Luis A. Salazar, Nicolás Saavedra. Characterization of microbial communities from gut microbiota of hypercholesterolemic and control subjectsFrontiers in Cellular and Infection Microbiology 2022; 12 doi: 10.3389/fcimb.2022.943609
28
Agata Anna Cisek, Edyta Szymańska, Aldona Wierzbicka-Rucińska, Tamara Aleksandrzak-Piekarczyk, Bożena Cukrowska. Methanogenic Archaea in the Pediatric Inflammatory Bowel Disease in Relation to Disease Type and ActivityInternational Journal of Molecular Sciences 2024; 25(1): 673 doi: 10.3390/ijms25010673
29
Onur Kırtel, Eveline Lescrinier, Wim Van den Ende, Ebru Toksoy Öner. Discovery of fructans in ArchaeaCarbohydrate Polymers 2019; 220: 149 doi: 10.1016/j.carbpol.2019.05.064
30
Sayaka Fujio-Vejar, Yessenia Vasquez, Pamela Morales, Fabien Magne, Patricia Vera-Wolf, Juan A. Ugalde, Paola Navarrete, Martin Gotteland. The Gut Microbiota of Healthy Chilean Subjects Reveals a High Abundance of the Phylum VerrucomicrobiaFrontiers in Microbiology 2017; 8 doi: 10.3389/fmicb.2017.01221
31
Ji Eun Kim, Yun Ju Choi, Su Jin Lee, Jeong Eun Gong, Ji Eun Seong, So Hae Park, Dae Youn Hwang, Muhammad Jan. Evaluation of Deodorizing Effects of Saccharina japonica in 10-Month-Old ICR Mice Using a Novel Odor Marker Associated with AgingEvidence-Based Complementary and Alternative Medicine 2022; 2022: 1 doi: 10.1155/2022/1410144
32
D. Swati. Biocommunication of Archaea2017; : 277 doi: 10.1007/978-3-319-65536-9_17
33
Miguel A. Ortega, Oscar Fraile-Martínez, Irene Naya, Natalio García-Honduvilla, Melchor Álvarez-Mon, Julia Buján, Ángel Asúnsolo, Basilio de la Torre. Type 2 Diabetes Mellitus Associated with Obesity (Diabesity). The Central Role of Gut Microbiota and Its Translational ApplicationsNutrients 2020; 12(9): 2749 doi: 10.3390/nu12092749
34
Nour El Houda Mathlouthi, Hamadou Oumarou Hama, Imen Belguith, Slim Charfi, Tahya Boudawara, Jean-Christophe Lagier, Leila Ammar Keskes, Ghiles Grine, Radhouane Gdoura. Colorectal Cancer Archaeome: A Metagenomic Exploration, TunisiaCurrent Issues in Molecular Biology 2023; 45(9): 7572 doi: 10.3390/cimb45090477
35
Nadia Gaci, Prem Prashant Chaudhary, William Tottey, Monique Alric, Jean-François Brugère. Functional amplification and preservation of human gut microbiotaMicrobial Ecology in Health and Disease 2017; 28(1): 1308070 doi: 10.1080/16512235.2017.1308070
36
Jieting Peng, Xun Xiao, Min Hu, Xiangyu Zhang. Interaction between gut microbiome and cardiovascular diseaseLife Sciences 2018; 214: 153 doi: 10.1016/j.lfs.2018.10.063
37
François Blachier. Metabolism of Alimentary Compounds by the Intestinal Microbiota and Health2023; : 27 doi: 10.1007/978-3-031-26322-4_2
38
Lenka Tomasova, Leszek Dobrowolski, Halina Jurkowska, Maria Wróbel, Tomasz Huc, Karol Ondrias, Ryszard Ostaszewski, Marcin Ufnal. Intracolonic hydrogen sulfide lowers blood pressure in ratsNitric Oxide 2016; 60: 50 doi: 10.1016/j.niox.2016.09.007
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G. Grine, M. A. Boualam, M. Drancourt. Methanobrevibacter smithii, a methanogen consistently colonising the newborn stomachEuropean Journal of Clinical Microbiology & Infectious Diseases 2017; 36(12): 2449 doi: 10.1007/s10096-017-3084-7
40
Zhaoxi Liu, Meihua Liu, Jing Meng, Lushan Wang, Min Chen. A review of the interaction between diet composition and gut microbiota and its impact on associated diseaseJournal of Future Foods 2024; 4(3): 221 doi: 10.1016/j.jfutfo.2023.07.004
41
David Avelar Rodriguez, Paul MacDaragh Ryan, Eamonn Martin Mary Quigley. Textbook of Pediatric Gastroenterology, Hepatology and Nutrition2022; : 567 doi: 10.1007/978-3-030-80068-0_42
42
Christine Moissl-Eichinger, Alexander J. Probst, Giovanni Birarda, Anna Auerbach, Kaisa Koskinen, Peter Wolf, Hoi-Ying N. Holman. Human age and skin physiology shape diversity and abundance of Archaea on skinScientific Reports 2017; 7(1) doi: 10.1038/s41598-017-04197-4
43
B. Foxman, E. T. Martin. Use of the Microbiome in the Practice of Epidemiology: A Primer on -Omic TechnologiesAmerican Journal of Epidemiology 2015; 182(1): 1 doi: 10.1093/aje/kwv102
44
Mark Pimentel, Richard J. Saad, Millie D. Long, Satish S. C. Rao. ACG Clinical Guideline: Small Intestinal Bacterial OvergrowthAmerican Journal of Gastroenterology 2020; 115(2): 165 doi: 10.14309/ajg.0000000000000501
45
Mohamed Zeineldin, Ameer Megahed, Benjamin Blair, Brian Aldridge, James Lowe. Metagenomic Analysis of the Fecal Archaeome in Suckling Piglets Following Perinatal Tulathromycin MetaphylaxisAnimals 2021; 11(6): 1825 doi: 10.3390/ani11061825
46
Wajdi Ben Hania, Nathalie Ballet, Pascal Vandeckerkove, Bernard Ollivier, Paul W. O’Toole, Jean-François Brugère. Archaea - New Biocatalysts, Novel Pharmaceuticals and Various Biotechnological Applications2017;  doi: 10.5772/intechopen.69945
47
Olabisi Oluwabukola Coker, Jun Yu. Inflammation, Infection, and Microbiome in CancersPhysiology in Health and Disease 2021; : 27 doi: 10.1007/978-3-030-67951-4_2
48
Joon Yong Kim, Tae Woong Whon, Mi Young Lim, Yeon Bee Kim, Namhee Kim, Min-Sung Kwon, Juseok Kim, Se Hee Lee, Hak-Jong Choi, In-Hyun Nam, Won-Hyong Chung, Jung-Ha Kim, Jin-Woo Bae, Seong Woon Roh, Young-Do Nam. The human gut archaeome: identification of diverse haloarchaea in Korean subjectsMicrobiome 2020; 8(1) doi: 10.1186/s40168-020-00894-x
49
Abigail S. Gancz, Andrew G. Farrer, Michelle P. Nixon, Sterling Wright, Luis Arriola, Christina Adler, Emily R. Davenport, Neville Gully, Alan Cooper, Kate Britton, Keith Dobney, Justin D. Silverman, Laura S. Weyrich. Ancient dental calculus reveals oral microbiome shifts associated with lifestyle and disease in Great BritainNature Microbiology 2023; 8(12): 2315 doi: 10.1038/s41564-023-01527-3
50
Riccardo Farinella, Cosmeri Rizzato, Daria Bottai, Alice Bedini, Federica Gemignani, Stefano Landi, Giulia Peduzzi, Sara Rosati, Antonella Lupetti, Armando Cuttano, Francesca Moscuzza, Cristina Tuoni, Luca Filippi, Massimiliano Ciantelli, Arianna Tavanti, Daniele Campa. Maternal anthropometric variables and clinical factors shape neonatal microbiomeScientific Reports 2022; 12(1) doi: 10.1038/s41598-022-06792-6
51
Panagiotis S Adam, Guillaume Borrel, Céline Brochier-Armanet, Simonetta Gribaldo. The growing tree of Archaea: new perspectives on their diversity, evolution and ecologyThe ISME Journal 2017; 11(11): 2407 doi: 10.1038/ismej.2017.122
52
Jie Yang, Zhisheng Yu, Bobo Wang, Fabrice Ndayisenga. Gut region induces gastrointestinal microbiota community shift in Ujimqin sheep (Ovis aries): from a multi‐domain perspectiveEnvironmental Microbiology 2021; 23(12): 7603 doi: 10.1111/1462-2920.15782
53
Dorothy K. Superdock, Wei Zhang, Angela C. Poole. Processing and storage methods affect oral and gut microbiome compositionFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1253570
54
Avehi Singh, Joshua J. Faber-Hammond, Cynthia F. O'Rourke, Suzy C.P. Renn. Gut microbial diversity increases with social rank in the African cichlid fish, Astatotilapia burtoniAnimal Behaviour 2019; 152: 79 doi: 10.1016/j.anbehav.2019.04.003
55
Cheick Oumar Guindo, Lynda Amir, Carine Couderc, Michel Drancourt, Ghiles Grine. Rapid identification of clinically interesting methanogens using an improved MALDI-TOF-MS assay Access Microbiology 2022; 4(7) doi: 10.1099/acmi.0.000372
56
Rokhsareh Mohammadzadeh, Alexander Mahnert, Stefanie Duller, Christine Moissl-Eichinger. Archaeal key-residents within the human microbiome: characteristics, interactions and involvement in health and diseaseCurrent Opinion in Microbiology 2022; 67: 102146 doi: 10.1016/j.mib.2022.102146
57
Gillian M. Barlow, Allen Yu, Ruchi Mathur. Role of the Gut Microbiome in Obesity and Diabetes MellitusNutrition in Clinical Practice 2015; 30(6): 787 doi: 10.1177/0884533615609896
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Matan Shelomi, Shih-Shun Lin, Li-Yu Liu. Transcriptome and microbiome of coconut rhinoceros beetle (Oryctes rhinoceros) larvaeBMC Genomics 2019; 20(1) doi: 10.1186/s12864-019-6352-3
59
Dorines Rosario, Gholamreza Bidkhori, Sunjae Lee, Janis Bedarf, Falk Hildebrand, Emmanuelle Le Chatelier, Mathias Uhlen, Stanislav Dusko Ehrlich, Gordon Proctor, Ullrich Wüllner, Adil Mardinoglu, Saeed Shoaie. Systematic analysis of gut microbiome reveals the role of bacterial folate and homocysteine metabolism in Parkinson’s diseaseCell Reports 2021; 34(9): 108807 doi: 10.1016/j.celrep.2021.108807
60
Lei Xie, Yuhui Zhang, Jinshu Gao, Xinyi Li, Hongyuan Wang. Nitrate exposure induces intestinal microbiota dysbiosis and metabolism disorder in Bufo gargarizans tadpolesEnvironmental Pollution 2020; 264: 114712 doi: 10.1016/j.envpol.2020.114712
61
Pilar Calo-Mata, Jose Manuel Ageitos, Karola Böhme, Jorge Barros-Velázquez. New Weapons to Control Bacterial Growth2016; : 281 doi: 10.1007/978-3-319-28368-5_12
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Larica Mohanta, Bhaskar C. Das, Manorama Patri. Microbial communities modulating brain functioning and behaviors in zebrafish: A mechanistic approachMicrobial Pathogenesis 2020; 145: 104251 doi: 10.1016/j.micpath.2020.104251
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Wenkang Gao, Yixin Zhu, Jin Ye, Huikuan Chu. Gut non-bacterial microbiota contributing to alcohol-associated liver diseaseGut Microbes 2021; 13(1) doi: 10.1080/19490976.2021.1984122
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Hong Yao, Bernadine M. Flanagan, Barbara A. Williams, Deirdre Mikkelsen, Michael J. Gidley. Lactate and buyrate proportions, methanogen growth and gas production during in vitro dietary fibre fermentation all depend on fibre concentrationFood Hydrocolloids 2023; 134: 108061 doi: 10.1016/j.foodhyd.2022.108061
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Prashant K. Dhakephalkar, Om Prakash, Vikram B. Lanjekar, Manasi P. Tukdeo, Dilip R. Ranade. Microbial Diversity in Ecosystem Sustainability and Biotechnological Applications2019; : 565 doi: 10.1007/978-981-13-8487-5_21
66
Maria J. Villanueva-Millan, Gabriela Leite, Jiajing Wang, Walter Morales, Gonzalo Parodi, Maya L. Pimentel, Gillian M. Barlow, Ruchi Mathur, Ali Rezaie, Maritza Sanchez, Sarah Ayyad, Daniel Cohrs, Christine Chang, Mohamad Rashid, Ava Hosseini, Alyson Fiorentino, Stacy Weitsman, Brennan Chuang, Bianca Chang, Nipaporn Pichetshote, Mark Pimentel. Methanogens and Hydrogen Sulfide Producing Bacteria Guide Distinct Gut Microbe Profiles and Irritable Bowel Syndrome SubtypesAmerican Journal of Gastroenterology 2022; 117(12): 2055 doi: 10.14309/ajg.0000000000001997
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Francesco Candeliere, Laura Sola, Stefano Raimondi, Maddalena Rossi, Alberto Amaretti. Good and bad dispositions between archaea and bacteria in the human gut: New insights from metagenomic survey and co-occurrence analysisSynthetic and Systems Biotechnology 2024; 9(1): 88 doi: 10.1016/j.synbio.2023.12.007
68
Marc Cozannet, Guillaume Borrel, Erwan Roussel, Yann Moalic, Maxime Allioux, Amandine Sanvoisin, Laurent Toffin, Karine Alain. New Insights into the Ecology and Physiology of Methanomassiliicoccales from Terrestrial and Aquatic EnvironmentsMicroorganisms 2020; 9(1): 30 doi: 10.3390/microorganisms9010030
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Charlotte Deschamps, Sylvain Denis, Delphine Humbert, Nathalie Priymenko, Sandrine Chalancon, Jana De Bodt, Tom Van de Wiele, Ignacio Ipharraguerre, Inma Alvarez-Acero, Caroline Achard, Emmanuelle Apper, Stéphanie Blanquet-Diot. Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizesApplied Microbiology and Biotechnology 2024; 108(1) doi: 10.1007/s00253-023-12987-2
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Mor N. Lurie-Weinberger, Uri Gophna, Joseph Heitman. Archaea in and on the Human Body: Health Implications and Future DirectionsPLOS Pathogens 2015; 11(6): e1004833 doi: 10.1371/journal.ppat.1004833
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Guillaume Borrel, Angela McCann, Jennifer Deane, Marta C Neto, Denise B Lynch, Jean- François Brugère, Paul W O’Toole. Genomics and metagenomics of trimethylamine-utilizing Archaea in the human gut microbiomeThe ISME Journal 2017; 11(9): 2059 doi: 10.1038/ismej.2017.72
72
Yanyan Jiang, Zhongying Yuan, Yujuan Shen, Bruce A. Rosa, John Martin, Shengkui Cao, Yanjiao Zhou, Makedonka Mitreva, Jianping Cao. Alteration of the fecal microbiota in Chinese patients with Schistosoma japonicum infectionParasite 2021; 28: 1 doi: 10.1051/parasite/2020074
73
R. R. Yenikeyev, N. Y. Tatarinova, L. M. Zakharchuk. Mechanisms of Resistance to Clinically Significant Antibiotics of Bacterial Strains of the Genus Bacillus Isolated from Samples from the International Space StationMoscow University Biological Sciences Bulletin 2020; 75(4): 224 doi: 10.3103/S0096392520040045
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Jun Sun, Yinglin Xia. Comprehensive Physiology2023; : 4685 doi: 10.1002/cphy.c210052
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Dini Hu, Jianming Yang, Yingjie Qi, Boling Li, Kai Li, Kai Meng Mok. Metagenomic Analysis of Fecal Archaea, Bacteria, Eukaryota, and Virus in Przewalski's Horses Following Anthelmintic TreatmentFrontiers in Veterinary Science 2021; 8 doi: 10.3389/fvets.2021.708512
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Hari Krishnan Krishnamurthy, Michelle Pereira, Jophi Bosco, Jaimee George, Vasanth Jayaraman, Karthik Krishna, Tianhao Wang, Kang Bei, John J. Rajasekaran. Gut commensals and their metabolites in health and diseaseFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1244293
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Thomas S.B. Schmidt, Jeroen Raes, Peer Bork. The Human Gut Microbiome: From Association to ModulationCell 2018; 172(6): 1198 doi: 10.1016/j.cell.2018.02.044
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Ling Deng, Ronalds Silins, Josué L. Castro-Mejía, Witold Kot, Leon Jessen, Jonathan Thorsen, Shiraz Shah, Jakob Stokholm, Hans Bisgaard, Sylvain Moineau, Dennis Sandris Nielsen. A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal SamplesViruses 2019; 11(7): 667 doi: 10.3390/v11070667
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Ceren Acar, Sibel Kucukyildirim Celik, H. Ozgur Ozdemirel, Beril Erdem Tuncdemir, Saadet Alan, Hatice Mergen. Composition of the colon microbiota in the individuals with inflammatory bowel disease and colon cancerFolia Microbiologica 2023;  doi: 10.1007/s12223-023-01072-w
80
Fengchun Yang, Jeffery K. Tomberlin, Heather R. Jordan. Starvation Alters Gut Microbiome in Black Soldier Fly (Diptera: Stratiomyidae) LarvaeFrontiers in Microbiology 2021; 12 doi: 10.3389/fmicb.2021.601253
81
Maryam Tidjani Alou, Sabrina Naud, Saber Khelaifia, Marion Bonnet, Jean-Christophe Lagier, Didier Raoult. State of the Art in the Culture of the Human Microbiota: New Interests and StrategiesClinical Microbiology Reviews 2020; 34(1) doi: 10.1128/CMR.00129-19
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Alison Biester, Andrea N. Marcano-Delgado, Catherine L. Drennan. Structural Insights into Microbial One-Carbon Metabolic Enzymes Ni–Fe–S-Dependent Carbon Monoxide Dehydrogenases and Acetyl-CoA SynthasesBiochemistry 2022; 61(24): 2797 doi: 10.1021/acs.biochem.2c00425
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Lenka Tomasova, Marian Grman, Karol Ondrias, Marcin Ufnal. The impact of gut microbiota metabolites on cellular bioenergetics and cardiometabolic healthNutrition & Metabolism 2021; 18(1) doi: 10.1186/s12986-021-00598-5
84
Denise Mafra, Marcia Ribeiro, Larissa Fonseca, Bruna Regis, Ludmila F.M.F. Cardozo, Henrique Fragoso dos Santos, Hugo Emiliano de Jesus, Junia Schultz, Paul G. Shiels, Peter Stenvinkel, Alexandre Rosado. Archaea from the gut microbiota of humans: Could be linked to chronic diseases?Anaerobe 2022; 77: 102629 doi: 10.1016/j.anaerobe.2022.102629
85
Stephen C. Emencheta, Chinasa V. Olovo, Osita C. Eze, Chisom F. Kalu, Dinebari P. Berebon, Ebele B. Onuigbo, Marta M. D. C. Vila, Victor M. Balcão, Anthony A. Attama. The Role of Bacteriophages in the Gut Microbiota: Implications for Human HealthPharmaceutics 2023; 15(10): 2416 doi: 10.3390/pharmaceutics15102416
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Douwe F. de Wit, Nordin M. J. Hanssen, Koen Wortelboer, Hilde Herrema, Elena Rampanelli, Max Nieuwdorp. Evidence for the contribution of the gut microbiome to obesity and its reversalScience Translational Medicine 2023; 15(723) doi: 10.1126/scitranslmed.adg2773
87
Shajan Peter, Amanda Pendergraft, William VanDerPol, C. Mel Wilcox, Kondal R. Kyanam Kabir Baig, Casey Morrow, Jacques Izard, Peter J. Mannon. Mucosa-Associated Microbiota in Barrett's Esophagus, Dysplasia, and Esophageal Adenocarcinoma Differ Similarly Compared With Healthy ControlsClinical and Translational Gastroenterology 2020; 11(8): e00199 doi: 10.14309/ctg.0000000000000199
88
Thi Phuong Nam Bui, Henk A. Schols, Melliana Jonathan, Alfons J. M. Stams, Willem M. de Vos, Caroline M. Plugge. Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate ProductionFrontiers in Microbiology 2019; 10 doi: 10.3389/fmicb.2019.02449
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