BPG is committed to discovery and dissemination of knowledge
Home / Archive / Volume 17, Issue 5
This Article
Citation of this article
Corresponding Author of This Article
Article-Type of This Article
Open-Access Policy of This Article
Times Cited Counts in Google of This Article
Number of Hits and Downloads for This Article
  • Total Article Views (13066)
All Articles published online
The chart showing PDF series, HTML series, Figures (1-1) series.
Item 
Count 
PDF1266
HTML11642
Figures (1-1)158
 Sum=13066
Feb 7, 2011 (publication date) through Apr 23, 2024
Times Cited of This Article
Journal Information of This Article
Publication Name
World Journal of Gastroenterology
ISSN
1007-9327
Publisher of This Article
Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

Cited by in CrossRef
For: Fava F, Danese S. Intestinal microbiota in inflammatory bowel disease: Friend of foe? World J Gastroenterol 2011; 17(5): 557-566 [PMID: 21350704 DOI: 10.3748/wjg.v17.i5.557]
URL: https://www.wjgnet.com/1007-9327/full/v17/i5/557.htm
Number Citing Articles
1
Lauren E. Hudson, Sarah E. Anderson, Anita H. Corbett, Tracey J. Lamb. Gleaning Insights from Fecal Microbiota Transplantation and Probiotic Studies for the Rational Design of Combination Microbial Therapies. Clinical Microbiology Reviews 2017; 30(1): 191 doi: 10.1128/CMR.00049-16
2
Nermin Kamal Saeed, Mohammed Al-Beltagi, Adel Salah Bediwy, Yasser El-Sawaf, Osama Toema. Gut microbiota in various childhood disorders: Implication and indications. World Journal of Gastroenterology 2022; 28(18): 1875-1901 doi: 10.3748/wjg.v28.i18.1875
3
Geng Hu, Liying Liu, Xiuxiu Miao, Yanan Zhao, Yanan Peng, Xianyao Li. Symbiotic bacteria stabilize the intestinal environment by producing phenylpropanoids. Microbial Biotechnology 2023; 16(1): 88 doi: 10.1111/1751-7915.14180
4
Hengameh Mirsepasi, Søren Persson, Carsten Struve, Lee O B Andersen, Andreas M Petersen, Karen A Krogfelt. Microbial diversity in fecal samples depends on DNA extraction method: easyMag DNA extraction compared to QIAamp DNA stool mini kit extraction. BMC Research Notes 2014; 7(1): 50 doi: 10.1186/1756-0500-7-50
5
Anthony Corfield. Eukaryotic protein glycosylation: a primer for histochemists and cell biologists. Histochemistry and Cell Biology 2017; 147(2): 119 doi: 10.1007/s00418-016-1526-4
6
M Rauch, SV Lynch. The potential for probiotic manipulation of the gastrointestinal microbiome. Current Opinion in Biotechnology 2012; 23(2): 192 doi: 10.1016/j.copbio.2011.11.004
7
Xiaojun Zhang, Franky F. K. Choi, Yan Zhou, Feung P. Leung, Shun Tan, Shuhai Lin, Hongxi Xu, Wei Jia, Joseph J. Y. Sung, Zongwei Cai, Zhaoxiang Bian. Metabolite profiling of plasma and urine from rats with TNBS‐induced acute colitis using UPLC‐ESI‐QTOF‐MS‐based metabonomics – a pilot study. The FEBS Journal 2012; 279(13): 2322 doi: 10.1111/j.1742-4658.2012.08612.x
8
Chiara Mazziotta, Mauro Tognon, Fernanda Martini, Elena Torreggiani, John Charles Rotondo. Probiotics Mechanism of Action on Immune Cells and Beneficial Effects on Human Health. Cells 2023; 12(1): 184 doi: 10.3390/cells12010184
9
Hengameh Chloé Mirsepasi-Lauridsen, Katleen Vrankx, Jørgen Engberg, Alice Friis-Møller, Jørn Brynskov, Inge Nordgaard-Lassen, Andreas Munk Petersen, Karen Angeliki Krogfelt. Disease-Specific Enteric Microbiome Dysbiosis in Inflammatory Bowel Disease. Frontiers in Medicine 2018; 5 doi: 10.3389/fmed.2018.00304
10
Urs E. Nydegger, Walter Fierz, Lorenz Risch. Benefits and risks of IgA in immunoglobulin preparations. Transfusion and Apheresis Science 2012; 46(1): 97 doi: 10.1016/j.transci.2011.11.014
11
Lucrecia Carrera-Quintanar, Rocío I. López Roa, Saray Quintero-Fabián, Marina A. Sánchez-Sánchez, Barbara Vizmanos, Daniel Ortuño-Sahagún. Phytochemicals That Influence Gut Microbiota as Prophylactics and for the Treatment of Obesity and Inflammatory Diseases. Mediators of Inflammation 2018; 2018: 1 doi: 10.1155/2018/9734845
12
Tonghao Li, Xiaolin Chen, Qien Qi, Xin Feng. Bovine Milk Derived Exosomes Affect Gut Microbiota of DSS-Induced Colitis Mice. Indian Journal of Microbiology 2024; 64(1): 100 doi: 10.1007/s12088-023-01131-3
13
M K Ottow, E J Klaver, T C T M van der Pouw Kraan, P D Heijnen, L C Laan, H Kringel, D Y S Vogel, C D Dijkstra, G Kooij, I van Die. The helminth Trichuris suis suppresses TLR4-induced inflammatory responses in human macrophages. Genes & Immunity 2014; 15(7): 477 doi: 10.1038/gene.2014.38
14
Kazuo Azuma, Ryotaro Izumi, Mari Kawata, Tomone Nagae, Tomohiro Osaki, Yusuke Murahata, Takeshi Tsuka, Tomohiro Imagawa, Norihiko Ito, Yoshiharu Okamoto, Minoru Morimoto, Hironori Izawa, Hiroyuki Saimoto, Shinsuke Ifuku. Effects of Oral Administration of Chitin Nanofiber on Plasma Metabolites and Gut Microorganisms. International Journal of Molecular Sciences 2015; 16(9): 21931 doi: 10.3390/ijms160921931
15
Kieran M. Tuohy, Paola Venuti, Simone Cuva, Cesare Furlanello, Mattia Gasperotti, Andrea Mancini, Florencia Ceppa, Duccio Cavalieri, Carlotta de Filippo, Urska Vrhovsek, Pedro Mena, Daniele Del Rio, Francesca Fava. Diet-Microbe Interactions in the Gut. 2015; : 225 doi: 10.1016/B978-0-12-407825-3.00015-0
16
Maria Carmen Collado, Maria Cernada, Christine Baüerl, Máximo Vento, Gaspar Pérez-Martínez. Microbial ecology and host-microbiota interactions during early life stages. Gut Microbes 2012; 3(4): 352 doi: 10.4161/gmic.21215
17
Frances Widjaja, Ivonne M. C. M. Rietjens. From-Toilet-to-Freezer: A Review on Requirements for an Automatic Protocol to Collect and Store Human Fecal Samples for Research Purposes. Biomedicines 2023; 11(10): 2658 doi: 10.3390/biomedicines11102658
18
Kishore Vipperla, Stephen J. O'Keefe. The Microbiota and Its Metabolites in Colonic Mucosal Health and Cancer Risk. Nutrition in Clinical Practice 2012; 27(5): 624 doi: 10.1177/0884533612452012
19
Zhaohua Shen, Changxin Zhu, Yongsheng Quan, Wei Yuan, Shuai Wu, Zhenyu Yang, Weiwei Luo, Bei Tan, Xiaoyan Wang. Update on intestinal microbiota in Crohn's disease 2017: Mechanisms, clinical application, adverse reactions, and outlook. Journal of Gastroenterology and Hepatology 2017; 32(11): 1804 doi: 10.1111/jgh.13861
20
Amanda Ricciuto, Philip M. Sherman, Ronald M. Laxer. Gut microbiota in chronic inflammatory disorders: A focus on pediatric inflammatory bowel diseases and juvenile idiopathic arthritis. Clinical Immunology 2020; 215: 108415 doi: 10.1016/j.clim.2020.108415
21
Ditte Søvsø Gundelund Nielsen, Bent Borg Jensen, Peter Kappel Theil, Tina Skau Nielsen, Knud Erik Bach Knudsen, Stig Purup. Effect of butyrate and fermentation products on epithelial integrity in a mucus-secreting human colon cell line. Journal of Functional Foods 2018; 40: 9 doi: 10.1016/j.jff.2017.10.023
22
Kieran M. Tuohy, Lorenza Conterno, Mattia Gasperotti, Roberto Viola. Up-regulating the Human Intestinal Microbiome Using Whole Plant Foods, Polyphenols, and/or Fiber. Journal of Agricultural and Food Chemistry 2012; 60(36): 8776 doi: 10.1021/jf2053959
23
Sini Kang, Hyun Ju You, Ying Ju, Hee Jung Kim, Yun Ju Jeong, Tony V. Johnston, Geun Eog Ji, Seockmo Ku, Myeong Soo Park. Butyl-fructooligosaccharides modulate gut microbiota in healthy mice and ameliorate ulcerative colitis in a DSS-induced model. Food & Function 2022; 13(4): 1834 doi: 10.1039/D1FO03337A
24
Lina Lu, Wenjun Li, Chao Sun, Shuhe Kang, Jia Li, Xingping Luo, Qiong Su, Bin Liu, Song Qin. Phycocyanin Ameliorates Radiation‐Induced Acute Intestinal Toxicity by Regulating the Effect of the Gut Microbiota on the TLR4/Myd88/NF‐κB Pathway. Journal of Parenteral and Enteral Nutrition 2020; 44(7): 1308 doi: 10.1002/jpen.1744
25
Kieran M. Tuohy, Karen P. Scott. Diet-Microbe Interactions in the Gut. 2015; : 1 doi: 10.1016/B978-0-12-407825-3.00001-0
26
Maria A. Johansson, Sophia Björkander, Manuel Mata Forsberg, Khaleda Rahman Qazi, Maria Salvany Celades, Julia Bittmann, Matthias Eberl, Eva Sverremark-Ekström. Probiotic Lactobacilli Modulate Staphylococcus aureus-Induced Activation of Conventional and Unconventional T cells and NK Cells. Frontiers in Immunology 2016; 7 doi: 10.3389/fimmu.2016.00273
27
Zhi Liu, Wenshu Liu, Chao Ran, Jun Hu, Zhigang Zhou. Abrupt suspension of probiotics administration may increase host pathogen susceptibility by inducing gut dysbiosis. Scientific Reports 2016; 6(1) doi: 10.1038/srep23214
28
KM Davies, RV Espley. Opportunities and challenges for metabolic engineering of secondary metabolite pathways for improved human health characters in fruit and vegetable crops. New Zealand Journal of Crop and Horticultural Science 2013; 41(3): 154 doi: 10.1080/01140671.2013.793730
29
Ping Yi, LanJuan Li. The germfree murine animal: An important animal model for research on the relationship between gut microbiota and the host. Veterinary Microbiology 2012; 157(1-2): 1 doi: 10.1016/j.vetmic.2011.10.024
30
Yanjiao Zhou, Hongyu Gao, Kathie A Mihindukulasuriya, Patricio S La Rosa, Kristine M Wylie, Tatiana Vishnivetskaya, Mircea Podar, Barb Warner, Phillip I Tarr, David E Nelson, J Fortenberry, Martin J Holland, Sarah E Burr, William D Shannon, Erica Sodergren, George M Weinstock. Biogeography of the ecosystems of the healthy human body. Genome Biology 2013; 14(1): R1 doi: 10.1186/gb-2013-14-1-r1
31
N. Mojgani, Y. Shahali, M. Dadar. Immune modulatory capacity of probiotic lactic acid bacteria and applications in vaccine development. Beneficial Microbes 2020; 11(3): 213 doi: 10.3920/BM2019.0121
32
Suryani Tan, Luca Calani, Letizia Bresciani, Margherita Dall’asta, Andrea Faccini, Mary Ann Augustin, Sally L. Gras, Daniele Del Rio. The degradation of curcuminoids in a human faecal fermentation model. International Journal of Food Sciences and Nutrition 2015; 66(7): 790 doi: 10.3109/09637486.2015.1095865
33
Mahdi Shadnoush, Maryam Nazari, Hossein Hajianfar, Zeinab Faghfoori. Effects of probiotic yogurt consumption on intestinal permeability in inflammatory bowel disease: A double-blind randomized clinical Trial. Koomesh journal 2021; 23(2): 211 doi: 10.52547/koomesh.23.2.211
34
Yuseok Moon. Microbiome-Linked Crosstalk in the Gastrointestinal Exposome towards Host Health and Disease. Pediatric Gastroenterology, Hepatology & Nutrition 2016; 19(4): 221 doi: 10.5223/pghn.2016.19.4.221
35
Fiorella Biasi, Gabriella Leonarduzzi, Patricia I. Oteiza, Giuseppe Poli. Inflammatory Bowel Disease: Mechanisms, Redox Considerations, and Therapeutic Targets. Antioxidants & Redox Signaling 2013; 19(14): 1711 doi: 10.1089/ars.2012.4530
36
Reiner Wiest. Portal Hypertension VI. 2016; : 139 doi: 10.1007/978-3-319-23018-4_18
37
Eva Martini, Susanne M. Krug, Britta Siegmund, Markus F. Neurath, Christoph Becker. Mend Your Fences. Cellular and Molecular Gastroenterology and Hepatology 2017; 4(1): 33 doi: 10.1016/j.jcmgh.2017.03.007
38
Xue-Ran Guo, Cheng-Wei He, Han Gao, Rong-Xuan Hua, Chen Liang, Yi-Xuan Du, Hong-Wei Shang, Xin Lu, Jing-Dong Xu. Insight into role of short chain fatty acids in regulating intestinal mucosal barrier and alleviating inflammatory bowel disease. World Chinese Journal of Digestology 2022; 30(21): 928 doi: 10.11569/wcjd.v30.i21.928
Abstract() |  Core Tip() |  Full Article(HTML)() | Times Cited  (0) | Total Visits (0) | Open
39
Debabrata Majumdar, James P. Tiernan, Alan J. Lobo, Caroline A. Evans, Bernard M. Corfe. Keratins in colorectal epithelial function and disease. International Journal of Experimental Pathology 2012; 93(5): 305 doi: 10.1111/j.1365-2613.2012.00830.x
40
Salma Sultan, Mohammed El-Mowafy, Abdelaziz Elgaml, Tamer A. E. Ahmed, Hebatoallah Hassan, Walid Mottawea. Metabolic Influences of Gut Microbiota Dysbiosis on Inflammatory Bowel Disease. Frontiers in Physiology 2021; 12 doi: 10.3389/fphys.2021.715506
41
Petia Kovatcheva-Datchary, Valentina Tremaroli, Fredrik Bäckhed. The Prokaryotes. 2013; : 3 doi: 10.1007/978-3-642-30144-5_87
42
I. Polanco Allué. Microbiota y enfermedades gastrointestinales. Anales de Pediatría 2015; 83(6): 443.e1 doi: 10.1016/j.anpedi.2015.07.034
43
Thomas Reinehr, Christian L. Roth. The gut sensor as regulator of body weight. Endocrine 2015; 49(1): 35 doi: 10.1007/s12020-014-0518-1
44
Andrew L. Webb, Valerie F. Boras, Peter Kruczkiewicz, L. Brent Selinger, Eduardo N. Taboada, G. Douglas Inglis, P. H. Gilligan. Comparative Detection and Quantification of Arcobacter butzleri in Stools from Diarrheic and Nondiarrheic People in Southwestern Alberta, Canada. Journal of Clinical Microbiology 2016; 54(4): 1082 doi: 10.1128/JCM.03202-15
45
Geneviève Coulombe, Ariane Langlois, Giada De Palma, Marie‐Josée Langlois, Justin L. McCarville, Jessica Gagné‐Sanfaçon, Nathalie Perreault, Gen‐Sheng Feng, Premysl Bercik, François Boudreau, Elena F. Verdu, Nathalie Rivard. SHP‐2 Phosphatase Prevents Colonic Inflammation by Controlling Secretory Cell Differentiation and Maintaining Host‐Microbiota Homeostasis. Journal of Cellular Physiology 2016; 231(11): 2529 doi: 10.1002/jcp.25407
46
Mario Witkowski, Marco Witkowski, Nicola Gagliani, Samuel Huber. Recipe for IBD: can we use food to control inflammatory bowel disease?. Seminars in Immunopathology 2018; 40(2): 145 doi: 10.1007/s00281-017-0658-5
47
Rowena Chong, Catherine E. Grueber, Samantha Fox, Phil Wise, Vanessa R. Barrs, Carolyn J. Hogg, Katherine Belov. Looking like the locals - gut microbiome changes post-release in an endangered species. Animal Microbiome 2019; 1(1) doi: 10.1186/s42523-019-0012-4
48
I. Polanco Allué. Microbiota and gastrointestinal diseases. Anales de Pediatría (English Edition) 2015; 83(6): 443.e1 doi: 10.1016/j.anpede.2015.11.003
49
C. B. Larmonier, K. W. Shehab, F. K. Ghishan, P. R. Kiela. T Lymphocyte Dynamics in Inflammatory Bowel Diseases: Role of the Microbiome. BioMed Research International 2015; 2015: 1 doi: 10.1155/2015/504638
50
Suryani Tan, Thusitha W. T. Rupasinghe, Dedreia L. Tull, Berin Boughton, Christine Oliver, Chris McSweeny, Sally L. Gras, Mary Ann Augustin. Degradation of Curcuminoids by in Vitro Pure Culture Fermentation. Journal of Agricultural and Food Chemistry 2014; 62(45): 11005 doi: 10.1021/jf5031168
51
Zhanju Liu, Bai-Sui Feng, Shao-Bo Yang, Xiao Chen, Jingling Su, Ping-Chang Yang. Interleukin (IL)-23 Suppresses IL-10 in Inflammatory Bowel Disease. Journal of Biological Chemistry 2012; 287(5): 3591 doi: 10.1074/jbc.M111.304949
52
E. I Orgachev, H. Korkach, T. Lebedenko, O. Kotuzaki. SYNBIOTIC ADDITIVES IN THE WAFFLES TECHNOLOGY. Food Science and Technology 2019; 13(1) doi: 10.15673/fst.v13i1.1310
53
Lea-Maxie Haag, Britta Siegmund. Intestinal Microbiota and the Innate Immune System – A Crosstalk in Crohn’s Disease Pathogenesis. Frontiers in Immunology 2015; 6 doi: 10.3389/fimmu.2015.00489
54
A. Kirchgessner. The Gut-Brain Axis. 2016; : 439 doi: 10.1016/B978-0-12-802304-4.00021-9
55
Yunchang Zhang, Xuemeng Si, Ling Yang, Hui Wang, Ye Sun, Ning Liu. Association between intestinal microbiota and inflammatory bowel disease. Animal Models and Experimental Medicine 2022; 5(4): 311 doi: 10.1002/ame2.12255
56
Peter M. Clark, Noor Dawany, William Dampier, Stephen W. Byers, Richard G. Pestell, Aydin Tozeren. Bioinformatics analysis reveals transcriptome and microRNA signatures and drug repositioning targets for IBD and other autoimmune diseases. Inflammatory Bowel Diseases 2012; 18(12): 2315 doi: 10.1002/ibd.22958
57
Arong Wang, Cheng Guan, Tieqi Wang, Guangqing Mu, Yanfeng Tuo. Lactiplantibacillus plantarum-Derived Indole-3-lactic Acid Ameliorates Intestinal Barrier Integrity through the AhR/Nrf2/NF-κB Axis. Journal of Agricultural and Food Chemistry 2024;  doi: 10.1021/acs.jafc.4c01622
58
Rajvanshi Sutaria, Zi Hong Mok. Nanoparticle-enhanced mesalazine therapy for inflammatory bowel disease. Pharmaceutical Science Advances 2023; 1(2): 100014 doi: 10.1016/j.pscia.2023.100014
59
Candice E. Ruck, Oludare A. Odumade, Kinga K. Smolen. Vaccine Interactions With the Infant Microbiome: Do They Define Health and Disease?. Frontiers in Pediatrics 2020; 8 doi: 10.3389/fped.2020.565368
60
Neira Crnčević, Mirsada Hukić, Sara Deumić, Amir Selimagić, Ada Dozić, Ismet Gavrankapetanović, Dženana Klepo, Monia Avdić. Gastrointestinal Tract Microbiome Effect and Role in Disease Development. Diseases 2022; 10(3): 45 doi: 10.3390/diseases10030045
61
Lill Therese Thorkildsen, Felix Chinweije Nwosu, Ekaterina Avershina, Petr Ricanek, Gøri Perminow, Stephan Brackmann, Morten H. Vatn, Knut Rudi. Dominant Fecal Microbiota in Newly Diagnosed Untreated Inflammatory Bowel Disease Patients. Gastroenterology Research and Practice 2013; 2013: 1 doi: 10.1155/2013/636785
62
Claudia Burrello, Gabriella Pellegrino, Maria Rita Giuffrè, Giulia Lovati, Ilaria Magagna, Alice Bertocchi, Fulvia Milena Cribiù, Francesca Boggio, Fiorenzo Botti, Elena Trombetta, Laura Porretti, Antonio Di Sabatino, Maurizio Vecchi, Maria Rescigno, Flavio Caprioli, Federica Facciotti. Mucosa-associated microbiota drives pathogenic functions in IBD-derived intestinal iNKT cells. Life Science Alliance 2019; 2(1): e201800229 doi: 10.26508/lsa.201800229
63
Anna Chiara Piscaglia. Intestinal stem cells and celiac disease. World Journal of Stem Cells 2014; 6(2): 213-229 doi: 10.4252/wjsc.v6.i2.213
64
Franco Scaldaferri, Viviana Gerardi, Loris Riccardo Lopetuso, Fabio Del Zompo, Francesca Mangiola, Ivo Boškoski, Giovanni Bruno, Valentina Petito, Lucrezia Laterza, Giovanni Cammarota, Eleonora Gaetani, Alessandro Sgambato, Antonio Gasbarrini. Gut Microbial Flora, Prebiotics, and Probiotics in IBD: Their Current Usage and Utility. BioMed Research International 2013; 2013: 1 doi: 10.1155/2013/435268
65
Jan Wehkamp, Julia-Stefanie Frick. Microbiome and chronic inflammatory bowel diseases. Journal of Molecular Medicine 2017; 95(1): 21 doi: 10.1007/s00109-016-1495-z
66
Xinyang Li, Jun Shen, Zhihua Ran. Crosstalk between the gut and the liver via susceptibility loci: Novel advances in inflammatory bowel disease and autoimmune liver disease. Clinical Immunology 2017; 175: 115 doi: 10.1016/j.clim.2016.10.006
67
M.C. Collado, G. D'Auria, A. Mira, M.P. Francino. Bioactive Food as Dietary Interventions for Liver and Gastrointestinal Disease. 2013; : 235 doi: 10.1016/B978-0-12-397154-8.00029-4
68
Mohammed Shariq Iqbal, Mohammad Israil Ansari. Natural Bio-active Compounds. 2019; : 183 doi: 10.1007/978-981-13-7438-8_7
69
Nidhi Malhotra, Joonsoo Kang. SMAD regulatory networks construct a balanced immune system. Immunology 2013; 139(1): 1 doi: 10.1111/imm.12076
70
M. A. El-Hodhod, R. H. Aly, S. R. Youssef, S. I. Mohamed. Enhanced Blood Lymphocytes Apoptosis in Children with Inflammatory Bowel Disease. ISRN Gastroenterology 2013; 2013: 1 doi: 10.1155/2013/415417
71
Geng Hu, Liying Liu, Xiuxiu Miao, Yanan Zhao, Yanan Peng, Lewen Liu, Xianyao Li. The response of cecal microbiota to inflammatory state induced by Salmonella enterica serovar Enteritidis. Frontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.963678
72
Zain Kassam, Thomas S. Murray. Navigating the Pediatric Microbiome: Emerging Evidence and Clinical Implications. Current Pediatrics Reports 2014; 2(2): 93 doi: 10.1007/s40124-014-0040-1
73
A. V. Gorelov, E. V. Kanner, M. L. Maximov, A. S. Ermolaeva, A. A. Voznesenskaya, K. N. Dadasheva. Intestinal microbiota: updated evidence-based data on the efficacy of Lactobacillus rhamnosus GG and Bifidobacterium longum in pediatric practice. Medical Council 2018; (11): 175 doi: 10.21518/2079-701X-2018-11-175-180
74
F. Khan, S.F. Oloketuyi. A future perspective on neurodegenerative diseases: nasopharyngeal and gut microbiota. Journal of Applied Microbiology 2017; 122(2): 306 doi: 10.1111/jam.13327
75
Huijing Liang, Zihao Luo, Zhonghua Miao, Xi Shen, Ming Li, Xuguang Zhang, Jiehua Chen, Xiaolei Ze, Qiwei Chen, Fang He. Lactobacilli and bifidobacteria derived from infant intestines may activate macrophages and lead to different IL-10 secretion. Bioscience, Biotechnology, and Biochemistry 2020; 84(12): 2558 doi: 10.1080/09168451.2020.1811948
76
Serge Dionne, Carl-Frederic Duchatelier, Ernest G Seidman. The influence of vitamin D on M1 and M2 macrophages in patients with Crohn's disease. Innate Immunity 2017; 23(6): 557 doi: 10.1177/1753425917721965
77
Jacoline Gerritsen, Hauke Smidt, Ger T. Rijkers, Willem M. de Vos. Intestinal microbiota in human health and disease: the impact of probiotics. Genes & Nutrition 2011; 6(3): 209 doi: 10.1007/s12263-011-0229-7
78
Yuri Haneishi, Yuma Furuya, Mayu Hasegawa, Antonio Picarelli, Mauro Rossi, Junki Miyamoto. Inflammatory Bowel Diseases and Gut Microbiota. International Journal of Molecular Sciences 2023; 24(4): 3817 doi: 10.3390/ijms24043817
79
Jing Qu, Chunlei Shao, Yongfa Ying, Yuning Wu, Wen Liu, Yuhua Tian, Zhiyong Yin, Xiang Li, Zhengquan Yu, Jianwei Shuai. The spring-like effect of microRNA-31 in balancing inflammatory and regenerative responses in colitis. Frontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.1089729
80
Federica Del Chierico, Pamela Vernocchi, Luigi Bonizzi, Rita Carsetti, Anna Maria Castellazzi, Bruno Dallapiccola, Willem de Vos, Maria Elisabetta Guerzoni, Melania Manco, Gian Luigi Marseglia, Maurizio Muraca, Paola Roncada, Guglielmo Salvatori, Fabrizio Signore, Andrea Urbani, Lorenza Putignani. Early-life gut microbiota under physiological and pathological conditions: The central role of combined meta-omics-based approaches. Journal of Proteomics 2012; 75(15): 4580 doi: 10.1016/j.jprot.2012.02.018
81
Yuxi Guo, Ze Li, Nan Cheng, Xuemei Jia, Jie Wang, Hongyu Ma, Runyuan Zhao, Bolin Li, Yanru Cai, Qian Yang. To investigate the effects of artemisinin on inflammatory factors and intestinal microbiota in rats with ulcerative colitis based on network pharmacology. Frontiers in Gastroenterology 2022; 1 doi: 10.3389/fgstr.2022.979314
82
Katarina Radulovic, Jan Niess. Intestinal Microbiota in Health and Disease. 2014;  doi: 10.1201/b16442-2
83
Megan E. Himmel, Yu Yao, Paul C. Orban, Theodore S. Steiner, Megan K. Levings. Regulatory T‐cell therapy for inflammatory bowel disease: more questions than answers. Immunology 2012; 136(2): 115 doi: 10.1111/j.1365-2567.2012.03572.x
84
Amy Stieler Stewart, Shannon Pratt-Phillips, Liara M. Gonzalez. Alterations in Intestinal Permeability: The Role of the “Leaky Gut” in Health and Disease. Journal of Equine Veterinary Science 2017; 52: 10 doi: 10.1016/j.jevs.2017.02.009
85
Jean-Marie Berthelot, Marie-France de la Cochetière, Gilles Potel, Benoît Le Goff, Yves Maugars. Arguments en faveur du rôle de bactéries dormantes dans la pathogénie des spondyloarthrites. Revue du Rhumatisme 2012; 79(6): 511 doi: 10.1016/j.rhum.2012.07.008
86
Xin Chang, Shu-Ling Wang, Sheng-Bing Zhao, Yi-Hai Shi, Peng Pan, Lun Gu, Jun Yao, Zhao-Shen Li, Yu Bai. Extracellular Vesicles with Possible Roles in Gut Intestinal Tract Homeostasis and IBD. Mediators of Inflammation 2020; 2020: 1 doi: 10.1155/2020/1945832
87
Edris Nabizadeh, Nima Hosseini Jazani, Morteza Bagheri, Shahram Shahabi. Association of altered gut microbiota composition with chronic urticaria. Annals of Allergy, Asthma & Immunology 2017; 119(1): 48 doi: 10.1016/j.anai.2017.05.006
88
Sen Lin, Xiaomin Yang, Yanrong Long, Heju Zhong, Peng Wang, Peiqiang Yuan, Xiaoling Zhang, Lianqiang Che, Bin Feng, Jian Li, Yong Zhuo, Yan Lin, Shengyu Xu, De Wu, Zhengfeng Fang. Dietary supplementation withLactobacillus plantarummodified gut microbiota, bile acid profile and glucose homoeostasis in weaning piglets. British Journal of Nutrition 2020; 124(8): 797 doi: 10.1017/S0007114520001774
89
Asma Amamou, Cian O’Mahony, Mathilde Leboutte, Guillaume Savoye, Subrata Ghosh, Rachel Marion-Letellier. Gut Microbiota, Macrophages and Diet: An Intriguing New Triangle in Intestinal Fibrosis. Microorganisms 2022; 10(3): 490 doi: 10.3390/microorganisms10030490
90
Raul Y. Tito, Heleen Cypers, Marie Joossens, Gaëlle Varkas, Liesbet Van Praet, Elien Glorieus, Filip Van den Bosch, Martine De Vos, Jeroen Raes, Dirk Elewaut. Brief Report: Dialister as a Microbial Marker of Disease Activity in Spondyloarthritis. Arthritis & Rheumatology 2017; 69(1): 114 doi: 10.1002/art.39802
91
Cynthia Reinoso Webb, Iurii Koboziev, Kathryn L. Furr, Matthew B. Grisham. Protective and pro-inflammatory roles of intestinal bacteria. Pathophysiology 2016; 23(2): 67 doi: 10.1016/j.pathophys.2016.02.002
92
Folker Meyer, William L Trimble, Eugene B Chang, Kim M Handley. Functional predictions from inference and observation in sequence-based inflammatory bowel disease research. Genome Biology 2012; 13(9): 169 doi: 10.1186/gb4042
93
Yunchang Zhang, Tianqi Mu, Ying Yang, Jinhua Zhang, Fazheng Ren, Zhenlong Wu. Lactobacillus johnsonii Attenuates Citrobacter rodentium–Induced Colitis by Regulating Inflammatory Responses and Endoplasmic Reticulum Stress in Mice. The Journal of Nutrition 2021; 151(11): 3391 doi: 10.1093/jn/nxab250
94
Nazarii Kobyliak, Oleksandr Virchenko, Tetyana Falalyeyeva. Pathophysiological role of host microbiota in the development of obesity. Nutrition Journal 2015; 15(1) doi: 10.1186/s12937-016-0166-9
95
Maitham Abbas Khajah. The potential role of fecal microbiota transplantation in the treatment of inflammatory Bowel disease. Scandinavian Journal of Gastroenterology 2017; 52(11): 1172 doi: 10.1080/00365521.2017.1347812
96
Marcell Leonario-Rodriguez, Nicolás Saavedra. Microbiota intestinal y modulación del tejido adiposo en la patogénesis de la obesidad. Archivos Latinoamericanos de Nutrición 2022; 72(2): 100 doi: 10.37527/2022.72.2.004
97
M. Rauch, S.V. Lynch. Reference Module in Biomedical Sciences. 2014;  doi: 10.1016/B978-0-12-801238-3.00131-8
98
Lucy McMullen, Steven T Leach, Daniel A Lemberg, Andrew S Day. Current roles of specific bacteria in the pathogenesis of inflammatory bowel disease. AIMS Microbiology 2015; 1(1): 82 doi: 10.3934/microbiol.2015.1.82
99
Folker Meyer, William L Trimble, Eugene B Chang, Kim M Handley. Functional predictions from inference and observation in sequence-based inflammatory bowel disease research. Genome Biology 2012; 13(9) doi: 10.1186/gb-2012-13-9-169
100
Neta Brender-Gotlieb, Merav Lidar. Infection and Autoimmunity. 2015; : 793 doi: 10.1016/B978-0-444-63269-2.00057-X
101
Kieran M. Tuohy, Francesca Fava, Roberto Viola. ‘The way to a man's heart is through his gut microbiota’ – dietary pro- and prebiotics for the management of cardiovascular risk. Proceedings of the Nutrition Society 2014; 73(2): 172 doi: 10.1017/S0029665113003911
102
Steffen Nyegaard, Trine Andreasen, Jan Trige Rasmussen. Lactadherin orthologs inhibit migration of human, porcine and murine intestinal epithelial cells. Food Science & Nutrition 2017; 5(4): 934 doi: 10.1002/fsn3.479
103
Yuseok Moon. Cellular alterations of mucosal integrity by ribotoxins: Mechanistic implications of environmentally-linked epithelial inflammatory diseases. Toxicon 2012; 59(1): 192 doi: 10.1016/j.toxicon.2011.11.010
104
Harumi Jyonouchi. Comprehensive Guide to Autism. 2014; : 1995 doi: 10.1007/978-1-4614-4788-7_120
105
Thomas Julius Borody, Jordana Campbell. Fecal Microbiota Transplantation. Gastroenterology Clinics of North America 2012; 41(4): 781 doi: 10.1016/j.gtc.2012.08.008
106
Lisa Gruber, Dirk Haller. Metabonomics and Gut Microbiota in Nutrition and Disease. Molecular and Integrative Toxicology 2015; : 261 doi: 10.1007/978-1-4471-6539-2_13
107
Sonia Martínez-Herrero, Ignacio M. Larrayoz, Judit Narro-Íñiguez, Susana Rubio-Mediavilla, Alfredo Martínez. Lack of Adrenomedullin Aggravates Acute TNBS-Induced Colitis Symptoms in Mice, Especially in Females. Frontiers in Physiology 2017; 8 doi: 10.3389/fphys.2017.01058
108
Elisa Deriu, Janet Z. Liu, Milad Pezeshki, Robert A. Edwards, Roxanna J. Ochoa, Heidi Contreras, Stephen J. Libby, Ferric C. Fang, Manuela Raffatellu. Probiotic Bacteria Reduce Salmonella Typhimurium Intestinal Colonization by Competing for Iron. Cell Host & Microbe 2013; 14(1): 26 doi: 10.1016/j.chom.2013.06.007
109
Maria Carmen Collado, Maria Cernada, Christine Bäuerl, Máximo Vento, Gaspar Pérez-Martínez. Erratum to: Collado MC, et al. Gut Microbes Volume 3, Issue 4; pp. 352-65. Gut Microbes 2014; 5(2): 271 doi: 10.4161/gmic.29308
110
Lars V. Kristiansen, Martin Röllinghoff, Stephane Berghmans, Liselotte Højgaard. Preface. Journal of Allergy and Clinical Immunology 2011; 128(6): S25 doi: 10.1016/j.jaci.2011.10.003
111
Christine O’Carroll, Ailís Fagan, Fergus Shanahan, Ruaidhrí J. Carmody. Identification of a Unique Hybrid Macrophage-Polarization State following Recovery from Lipopolysaccharide Tolerance. The Journal of Immunology 2014; 192(1): 427 doi: 10.4049/jimmunol.1301722
112
Yu A Kulygina, M F Osipenko, M I Skalinskaya, K D Palchunova. The prevalence of bacterial overgrowth syndrome and its associated factors in patients with inflammatory bowel diseases (according to the data of the Novosibirsk registry). Terapevticheskii arkhiv 2017; 89(2): 15 doi: 10.17116/terarkh201789215-19
113
Alejandro Cabezas-Cruz, Luis G. Bermúdez-Humarán. Exploring the relationship between Faecalibacterium duncaniae and Escherichia coli in inflammatory bowel disease (IBD): Insights and implications. Computational and Structural Biotechnology Journal 2024; 23: 1 doi: 10.1016/j.csbj.2023.11.027
114
Anka Trajkovska Petkoska, Anita Trajkovska-Broach. Analysis of Infectious Disease Problems (Covid-19) and Their Global Impact. Infosys Science Foundation Series 2021; : 279 doi: 10.1007/978-981-16-2450-6_13
115
Vanessa Ribeiro Figliuolo, Robson Coutinho-Silva, Claudia Mara Lara Melo Coutinho. Contribution of sulfate-reducing bacteria to homeostasis disruption during intestinal inflammation. Life Sciences 2018; 215: 145 doi: 10.1016/j.lfs.2018.11.009
116
Aicha Kriaa, Amin Jablaoui, Héla Mkaouar, Nizar Akermi, Emmanuelle Maguin, Moez Rhimi. Serine proteases at the cutting edge of IBD: Focus on gastrointestinal inflammation. The FASEB Journal 2020; 34(6): 7270 doi: 10.1096/fj.202000031RR
117
Alejandra de Moreno de LeBlanc, Jean Guy LeBlanc. Effect of probiotic administration on the intestinal microbiota, current knowledge and potential applications. World Journal of Gastroenterology 2014; 20(44): 16518-16528 doi: 10.3748/wjg.v20.i44.16518
118
Dylan Dodd, Isaac Cann. Tutorial: Microbiome studies in drug metabolism. Clinical and Translational Science 2022; 15(12): 2812 doi: 10.1111/cts.13416
119
Yu Jin, Yan Lin, Lianjie Lin, Changqing Zheng. IL-17/IFN-γInteractions Regulate Intestinal Inflammation in TNBS-Induced Acute Colitis. Journal of Interferon & Cytokine Research 2012; 32(11): 548 doi: 10.1089/jir.2012.0030
120
Alexandria Turner, Eileen Chijoff, Martin Veysey, Simon Keely, Christopher J. Scarlett, Mark Lucock, Emma L. Beckett. Interactions between taste receptors and the gastrointestinal microbiome in inflammatory bowel disease. Journal of Nutrition & Intermediary Metabolism 2019; 18: 100106 doi: 10.1016/j.jnim.2019.100106
121
Wangyang Jin, Lihua Jiang, Siling Hu, Aiyi Zhu. Metabolite features of serum and intestinal microbiota response of largemouth bass (Micropterus salmoides) after Aeromonas hydrophila challenge. Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 2023; 263: 109496 doi: 10.1016/j.cbpc.2022.109496
122
Ana Letícia Malheiros Silveira, Adaliene Versiani Matos Ferreira, Mauro Martins Teixeira. Dietary Interventions in Gastrointestinal Diseases. 2019; : 229 doi: 10.1016/B978-0-12-814468-8.00019-3
123
Maliha Naseer, Shiva Poola, Syed Ali, Sami Samiullah, Veysel Tahan. Prebiotics and Probiotics in Inflammatory Bowel Disease: Where are we now and where are we going?. Current Clinical Pharmacology 2020; 15(3): 216 doi: 10.2174/1574884715666200312100237
124
Kyung-Joo Kim, Suhyun Kyung, Hui Jin, Minju Im, Jae-won Kim, Hyun Su Kim, Se-Eun Jang. Lactic Acid Bacteria Isolated from Human Breast Milk Improve Colitis Induced by 2,4,6-Trinitrobenzene Sulfonic Acid by Inhibiting NF-κB Signaling in Mice. Journal of Microbiology and Biotechnology 2023; 33(8): 1057 doi: 10.4014/jmb.2303.03018
125
Kun Lu, Charles G. Knutson, John S. Wishnok, James G. Fox, Steven R. Tannenbaum. Serum Metabolomics in a Helicobacter hepaticus Mouse Model of Inflammatory Bowel Disease Reveal Important Changes in the Microbiome, Serum Peptides, and Intermediary Metabolism. Journal of Proteome Research 2012; 11(10): 4916 doi: 10.1021/pr300429x
126
Moftah H. Alhagamhmad, Andrew S. Day, Daniel A. Lemberg, Steven T. Leach. An overview of the bacterial contribution to Crohn disease pathogenesis.  Journal of Medical Microbiology 2016; 65(10): 1049 doi: 10.1099/jmm.0.000331
127
Spencer V. Nyholm, Joerg Graf. Knowing your friends: invertebrate innate immunity fosters beneficial bacterial symbioses. Nature Reviews Microbiology 2012; 10(12): 815 doi: 10.1038/nrmicro2894
128
Andrea Michielan, Renata D’Incà. Intestinal Permeability in Inflammatory Bowel Disease: Pathogenesis, Clinical Evaluation, and Therapy of Leaky Gut. Mediators of Inflammation 2015; 2015: 1 doi: 10.1155/2015/628157
129
Martha L. Slattery, Jennifer S. Herrick, Kristina L. Bondurant, Roger K. Wolff. Toll‐like receptor genes and their association with colon and rectal cancer development and prognosis. International Journal of Cancer 2012; 130(12): 2974 doi: 10.1002/ijc.26314
130
Elizabeth R. Volkmann, Yu‐Ling Chang, Nashla Barroso, Daniel E. Furst, Philip J. Clements, Alan H. Gorn, Bennett E. Roth, Jeffrey L. Conklin, Terri Getzug, James Borneman, Dermot P. B. McGovern, Maomeng Tong, Jonathan P. Jacobs, Jonathan Braun. Association of Systemic Sclerosis With a Unique Colonic Microbial Consortium. Arthritis & Rheumatology 2016; 68(6): 1483 doi: 10.1002/art.39572
131
Magdalena Muszer, Magdalena Noszczyńska, Katarzyna Kasperkiewicz, Mikael Skurnik. Human Microbiome: When a Friend Becomes an Enemy. Archivum Immunologiae et Therapiae Experimentalis 2015; 63(4): 287 doi: 10.1007/s00005-015-0332-3
132
Reiner Wiest, Melissa Lawson, Markus Geuking. Pathological bacterial translocation in liver cirrhosis. Journal of Hepatology 2014; 60(1): 197 doi: 10.1016/j.jhep.2013.07.044
133
Karin R. Engelhardt, Bodo Grimbacher. Interleukin-10 in Health and Disease. Current Topics in Microbiology and Immunology 2014; 380: 1 doi: 10.1007/978-3-662-43492-5_1
134
Tsuyoshi Mishiro, Ryusaku Kusunoki, Aya Otani, Md Mesbah Uddin Ansary, Miki Tongu, Nanae Harashima, Takaya Yamada, Shuichi Sato, Yuji Amano, Kazuhito Itoh, Shunji Ishihara, Yoshikazu Kinoshita. Butyric acid attenuates intestinal inflammation in murine DSS-induced colitis model via milk fat globule-EGF factor 8. Laboratory Investigation 2013; 93(7): 834 doi: 10.1038/labinvest.2013.70
135
Laurens E. Zandbergen, Thomas Halverson, Jolanda K. Brons, Alan J. Wolfe, Marjon G. J. de Vos. The Good and the Bad: Ecological Interaction Measurements Between the Urinary Microbiota and Uropathogens. Frontiers in Microbiology 2021; 12 doi: 10.3389/fmicb.2021.659450
136
Jong-Hoon Lee, Young Lee, Seong-Ho Choi, Eunsin Bae, Dong-Woon Lee. Correlation analysis of the oral mucosal microbiome and diabetes mellitus using microbial DNA in elderly male subjects. Oral Biology Research 2022; 46(1): 10 doi: 10.21851/obr.46.01.202203.10
137
Tatiana Y. Fofanova, Joseph F. Petrosino, Richard Kellermayer. Microbiome–Epigenome Interactions and the Environmental Origins of Inflammatory Bowel Diseases. Journal of Pediatric Gastroenterology and Nutrition 2016; 62(2): 208 doi: 10.1097/MPG.0000000000000950
138
Wangyang Jin, Siling Hu, Lihua Jiang, Aiyi Zhu. Metabolite Features of Serum and Intestinal Microbiota Response of Largemouth Bass (Micropterus Salmo​Ides) after Aeromonas Hydrophila Challenge. SSRN Electronic Journal 2022;  doi: 10.2139/ssrn.4200273
139
Donatella Comito, Claudio Romano. Dysbiosis in the Pathogenesis of Pediatric Inflammatory Bowel Diseases. International Journal of Inflammation 2012; 2012: 1 doi: 10.1155/2012/687143
140
Israr Khan, Junshu Wei, Anping Li, Zhirong Liu, Pingrong Yang, Yaping Jing, Xinjun Chen, Tang Zhao, Yanrui Bai, Lajia Zha, Chenhui Li, Naeem Ullah, Tuanjie Che, Chunjiang Zhang. Lactobacillus plantarum strains attenuated DSS-induced colitis in mice by modulating the gut microbiota and immune response. International Microbiology 2022; 25(3): 587 doi: 10.1007/s10123-022-00243-y
141
Anupama Tyagi, Uday Kumar, Suryam Reddy, Vadakattu S. Santosh, Saazida B. Mohammed, Nasreen Z. Ehtesham, Ahamed Ibrahim. Attenuation of colonic inflammation by partial replacement of dietary linoleic acid with α-linolenic acid in a rat model of inflammatory bowel disease. British Journal of Nutrition 2012; 108(9): 1612 doi: 10.1017/S0007114511007197
142
Malgorzata Kloc, Ahmed Uosef, Mahmoud Elshawwaf, Ahmed Adel Abbas Abdelshafy, Kamal Mamdoh Kamal Elsaid, Jacek Z. Kubiak, Rafik Mark Ghobrial. Symbiosis: Cellular, Molecular, Medical and Evolutionary Aspects. Results and Problems in Cell Differentiation 2020; 69: 605 doi: 10.1007/978-3-030-51849-3_23
143
Elizabeth R Volkmann, Anna-Maria Hoffmann-Vold, Yu-Ling Chang, Jonathan P Jacobs, Kirsten Tillisch, Emeran A Mayer, Philip J Clements, Johannes R Hov, Martin Kummen, Øyvind Midtvedt, Venu Lagishetty, Lin Chang, Jennifer S Labus, Øyvind Molberg, Jonathan Braun. Systemic sclerosis is associated with specific alterations in gastrointestinal microbiota in two independent cohorts. BMJ Open Gastroenterology 2017; 4(1): e000134 doi: 10.1136/bmjgast-2017-000134
144
Francesca Fava. Diet-Microbe Interactions in the Gut. 2015; : 127 doi: 10.1016/B978-0-12-407825-3.00009-5
145
Fujiang Chu, Xiaobao Jin, Hongyan Ma. Anti-diarrhea effects and identification of Musca domestica larvae low molecular weight peptides (LMWP). Journal of Pharmaceutical and Biomedical Analysis 2019; 173: 162 doi: 10.1016/j.jpba.2019.05.032
146
Chunrong Huang, Guochao Shi. Smoking and microbiome in oral, airway, gut and some systemic diseases. Journal of Translational Medicine 2019; 17(1) doi: 10.1186/s12967-019-1971-7
147
Tomasz Gosiewski, Magdalena Strus, Krzysztof Fyderek, Kinga Kowalska‐Duplaga, Andrzej Wedrychowicz, Urszula Jedynak‐Wasowicz, Malgorzata Sladek, Stanislaw Pieczarkowski, Pawel Adamski, Piotr B. Heczko. Horizontal Distribution of the Fecal Microbiota in Adolescents With Inflammatory Bowel Disease. Journal of Pediatric Gastroenterology and Nutrition 2012; 54(1): 20 doi: 10.1097/MPG.0b013e31822d53e5
148
Anindya Roy Chowdhury, Utpal Bakshi. Pathophysiological responses from human gut microbiome. World Journal of Translational Medicine 2014; 3(3): 133-140 doi: 10.5528/wjtm.v3.i3.133
149
Xian Chen, Su Liu, Qiao Tan, Yehuda Shoenfeld, Yong Zeng. Microbiome, autoimmunity, allergy, and helminth infection: The importance of the pregnancy period. American Journal of Reproductive Immunology 2017; 78(2) doi: 10.1111/aji.12654
150
Jean-Marie Berthelot, Marie-France de la Cochetière, Gilles Potel, Benoît Le Goff, Yves Maugars. Evidence supporting a role for dormant bacteria in the pathogenesis of spondylarthritis. Joint Bone Spine 2013; 80(2): 135 doi: 10.1016/j.jbspin.2012.08.002
151
Tennekoon B. Karunaratne, Chijioke Okereke, Marissa Seamon, Sharad Purohit, Chandramohan Wakade, Amol Sharma. Niacin and Butyrate: Nutraceuticals Targeting Dysbiosis and Intestinal Permeability in Parkinson’s Disease. Nutrients 2020; 13(1): 28 doi: 10.3390/nu13010028
152
O. V. Khlynova, E. A. Stepina. Disturbance of intestinal permeability and its role in the development of cardiovascular complications in persons with inflammatory bowel diseases. Experimental and Clinical Gastroenterology 2023; (11): 36 doi: 10.31146/1682-8658-ecg-207-11-36-45
153
Serge Dionne, Sophie Restellini, Jamie Koenekoop, Pedro Salvador Escribano, Ciriaco A. Piccirillo, Patrick Charlebois, A. Sender Liberman, Barry Stein, Carl Frederic Duchatellier, Ernest Gerald Seidman. Characterization of myofibroblasts isolated from the intestine of patients with inflammatory bowel disease. F1000Research 2019; 8: 275 doi: 10.12688/f1000research.13906.1
154
Melanie Schirmer, Eric A. Franzosa, Jason Lloyd-Price, Lauren J. McIver, Randall Schwager, Tiffany W. Poon, Ashwin N. Ananthakrishnan, Elizabeth Andrews, Gildardo Barron, Kathleen Lake, Mahadev Prasad, Jenny Sauk, Betsy Stevens, Robin G. Wilson, Jonathan Braun, Lee A. Denson, Subra Kugathasan, Dermot P. B. McGovern, Hera Vlamakis, Ramnik J. Xavier, Curtis Huttenhower. Dynamics of metatranscription in the inflammatory bowel disease gut microbiome. Nature Microbiology 2018; 3(3): 337 doi: 10.1038/s41564-017-0089-z
155
Bárbara O González Navarro, Cándida Forte Miranda, Ramón Alonso Rojas, Antonio Alfonso Montero, Liliana Francis Turner, María Elena Arteaga Pérez, Layna Riera Ojeda. Primera incursión en la obtención de curieles libre de patógenos específicos en Cuba. Revista Colombiana de Biotecnología 2014; 16(1): 93 doi: 10.15446/rev.colomb.biote.v16n1.44231
156
Vanessa Fernandes Rodrigues, Jefferson Elias-Oliveira, Ítalo Sousa Pereira, Jéssica Assis Pereira, Sara Cândida Barbosa, Melissa Santana Gonsalez Machado, Daniela Carlos. Akkermansia muciniphila and Gut Immune System: A Good Friendship That Attenuates Inflammatory Bowel Disease, Obesity, and Diabetes. Frontiers in Immunology 2022; 13 doi: 10.3389/fimmu.2022.934695
157
Anupama Tyagi, Uday Kumar, Vadakattu Sai Santosh, Suryam Reddy, Saazida Bhanu Mohammed, Ahamed Ibrahim. Partial replacement of dietary linoleic acid with long chain n-3 polyunsaturated fatty acids protects against dextran sulfate sodium-induced colitis in rats. Prostaglandins, Leukotrienes and Essential Fatty Acids 2014; 91(6): 289 doi: 10.1016/j.plefa.2014.09.003
158
Sultan Alkadhi, Dale Kunde, Rajkumar Cheluvappa, Sarron Randall-Demllo, Rajaraman Eri. The murine appendiceal microbiome is altered in spontaneous colitis and its pathological progression. Gut Pathogens 2014; 6(1) doi: 10.1186/1757-4749-6-25
159
Iurii Koboziev, Cynthia Reinoso Webb, Kathryn L. Furr, Matthew B. Grisham. Role of the enteric microbiota in intestinal homeostasis and inflammation. Free Radical Biology and Medicine 2014; 68: 122 doi: 10.1016/j.freeradbiomed.2013.11.008
160
Takahiro Kawase, Mao Nagasawa, Hiromi Ikeda, Shinobu Yasuo, Yasuhiro Koga, Mitsuhiro Furuse. Gut microbiota of mice putatively modifies amino acid metabolism in the host brain. British Journal of Nutrition 2017; 117(6): 775 doi: 10.1017/S0007114517000678
161
Israr Khan, Naeem Ullah, Lajia Zha, Yanrui Bai, Ashiq Khan, Tang Zhao, Tuanjie Che, Chunjiang Zhang. Alteration of Gut Microbiota in Inflammatory Bowel Disease (IBD): Cause or Consequence? IBD Treatment Targeting the Gut Microbiome. Pathogens 2019; 8(3): 126 doi: 10.3390/pathogens8030126
162
Julia Etulain, Mirta Schattner. Current viewpoints on platelet contribution to inflammation. World Journal of Hematology 2012; 1(4): 14-21 doi: 10.5315/wjh.v1.i4.14
163
The Gut Microbiota (Microbiome) in Cardiovascular Disease and Its Therapeutic Regulation. Frontiers in Cellular and Infection Microbiology 2022; 12 doi: 10.3389/fcimb.2022.903570
164
Ralf Rabus, Sofia S. Venceslau, Lars Wöhlbrand, Gerrit Voordouw, Judy D. Wall, Inês A.C. Pereira. . Advances in Microbial Physiology 2015; 66: 55 doi: 10.1016/bs.ampbs.2015.05.002
165
Doha Anka Idrissi, Nezha Senhaji, Asmae Aouiss, Loubna Khalki, Youssef Tijani, Nabil Zaid, Fatima Zahra Marhoume, Abdallah Naya, Mounia Oudghiri, Mostafa Kabine, Younes Zaid. IL-1 and CD40/CD40L platelet complex: elements of induction of Crohn’s disease and new therapeutic targets. Archives of Pharmacal Research 2021; 44(1): 117 doi: 10.1007/s12272-020-01296-1
166
Esther Neelis, Barbara de Koning, Edmond Rings, René Wijnen, Ben Nichols, Jessie Hulst, Konstantinos Gerasimidis. The Gut Microbiome in Patients with Intestinal Failure: Current Evidence and Implications for Clinical Practice. Journal of Parenteral and Enteral Nutrition 2019; 43(2): 194 doi: 10.1002/jpen.1423
167
Bokyung Lee, Xiaochen Yin, Stephen M. Griffey, Maria L. Marco, H. Goodrich-Blair. Attenuation of Colitis by Lactobacillus casei BL23 Is Dependent on the Dairy Delivery Matrix. Applied and Environmental Microbiology 2015; 81(18): 6425 doi: 10.1128/AEM.01360-15
168
ViVi Tang Kang Wee, Hitoshi Shirakawa, Sung-Ling Yeh, Chiu-Li Yeh. Fermented rice bran supplementation attenuates colonic injury through modulating intestinal aryl hydrocarbon receptor and innate lymphoid cells in mice with dextran sodium sulfate-induced acute colitis. The Journal of Nutritional Biochemistry 2024; 123: 109493 doi: 10.1016/j.jnutbio.2023.109493
169
Laurence Delhaes, Sébastien Monchy, Emilie Fréalle, Christine Hubans, Julia Salleron, Sylvie Leroy, Anne Prevotat, Frédérick Wallet, Benoit Wallaert, Eduardo Dei-Cas, Telesphore Sime-Ngando, Magali Chabé, Eric Viscogliosi, Sam Paul Brown. The Airway Microbiota in Cystic Fibrosis: A Complex Fungal and Bacterial Community—Implications for Therapeutic Management. PLoS ONE 2012; 7(4): e36313 doi: 10.1371/journal.pone.0036313
170
Lily Nahidi, Andrew S. Day, Daniel A. Lemberg, Steven T. Leach. Paediatric Inflammatory Bowel Disease: A Mechanistic Approach to Investigate Exclusive Enteral Nutrition Treatment. Scientifica 2014; 2014: 1 doi: 10.1155/2014/423817
171
Marcin Talar, Aleksandra Tarasiuk, Maciej Salaga, Jakub Fichna. Current Advances for Development of Functional Foods Modulating Inflammation and Oxidative Stress. 2022; : 121 doi: 10.1016/B978-0-12-823482-2.00004-2
172
Jianxiang Xue, Jessica A. Dominguez Rieg, Linto Thomas, James R. White, Timo Rieg. Intestine-Specific NHE3 Deletion in Adulthood Causes Microbial Dysbiosis. Frontiers in Cellular and Infection Microbiology 2022; 12 doi: 10.3389/fcimb.2022.896309
173
Rishav Seal, Lara S. U. Schwab, Cristina M. Chiarolla, Nadine Hundhausen, Georg Heinrich Klose, Simone Reu-Hofer, Andreas Rosenwald, Johannes Wiest, Friederike Berberich-Siebelt. Delayed and limited administration of the JAKinib tofacitinib mitigates chronic DSS-induced colitis. Frontiers in Immunology 2023; 14 doi: 10.3389/fimmu.2023.1179311
174
Yan Wang, Lloyd H. Kasper. The role of microbiome in central nervous system disorders. Brain, Behavior, and Immunity 2014; 38: 1 doi: 10.1016/j.bbi.2013.12.015
175
Candace L. Williams, Kimberly A. Dill-McFarland, Michael W. Vandewege, Darrell L. Sparks, Scott T. Willard, Andrew J. Kouba, Garret Suen, Ashli E. Brown. Dietary Shifts May Trigger Dysbiosis and Mucous Stools in Giant Pandas (Ailuropoda melanoleuca). Frontiers in Microbiology 2016; 7 doi: 10.3389/fmicb.2016.00661
176
Qingsen Shang, Hao Jiang, Chao Cai, Jiejie Hao, Guoyun Li, Guangli Yu. Gut microbiota fermentation of marine polysaccharides and its effects on intestinal ecology: An overview. Carbohydrate Polymers 2018; 179: 173 doi: 10.1016/j.carbpol.2017.09.059
177
Rima Chakaroun, Lucas Massier, Peter Kovacs. Gut Microbiome, Intestinal Permeability, and Tissue Bacteria in Metabolic Disease: Perpetrators or Bystanders?. Nutrients 2020; 12(4): 1082 doi: 10.3390/nu12041082
178
José F. García-Mazcorro, Elvira Garza-González, Alicia G. Marroquín-Cardona, José L. Tamayo. Caracterización, influencia y manipulación de la microbiota gastrointestinal en salud y enfermedad. Gastroenterología y Hepatología 2015;  doi: 10.1016/j.gastrohep.2015.01.004
179
Alina Popescu, Felix Bende. Alcohol and Alcohol-related Diseases. 2023; : 1185 doi: 10.1007/978-3-031-32483-3_62
180
Robert D. Stedtfeld, Tiffany M. Stedtfeld, Kelly A. Fader, Maggie R. Williams, Prianca Bhaduri, John Quensen, Timothy R. Zacharewski, James M. Tiedje, Syed A. Hashsham. TCDD influences reservoir of antibiotic resistance genes in murine gut microbiome. FEMS Microbiology Ecology 2017; 93(5) doi: 10.1093/femsec/fix058
181
Ziv Savin, Shaye Kivity, Hagith Yonath, Shoenfeld Yehuda. Smoking and the intestinal microbiome. Archives of Microbiology 2018; 200(5): 677 doi: 10.1007/s00203-018-1506-2
182
Daniel Levin, Giada De Palma, Hannah Zou, Ava Hadi Zadeh Bazzaz, Elena Verdu, Barbara Baker, Maria Ines Pinto-Sanchez, Nader Khalidi, Maggie J Larché, Karen A. Beattie, Premysl Bercik. Fecal microbiome differs between patients with systemic sclerosis with and without small intestinal bacterial overgrowth. Journal of Scleroderma and Related Disorders 2021; 6(3): 290 doi: 10.1177/23971983211032808
183
Corina Ceapa, Harm Wopereis, Lahcene Rezaïki, Michiel Kleerebezem, Jan Knol, Raish Oozeer. Influence of fermented milk products, prebiotics and probiotics on microbiota composition and health. Best Practice & Research Clinical Gastroenterology 2013; 27(1): 139 doi: 10.1016/j.bpg.2013.04.004
184
Harald Renz, Ingo B. Autenrieth, Per Brandtzæg, William O. Cookson, Stephen Holgate, Erika von Mutius, Rudolf Valenta, Dirk Haller. Gene-environment interaction in chronic disease: A European Science Foundation Forward Look. Journal of Allergy and Clinical Immunology 2011; 128(6): S27 doi: 10.1016/j.jaci.2011.09.039
185
Maria A. Johansson, Shanie Saghafian-Hedengren, Yeneneh Haileselassie, Stefan Roos, Marita Troye-Blomberg, Caroline Nilsson, Eva Sverremark-Ekström, Yolanda Sanz. Early-Life Gut Bacteria Associate with IL-4−, IL-10− and IFN-γ Production at Two Years of Age. PLoS ONE 2012; 7(11): e49315 doi: 10.1371/journal.pone.0049315
186
Laurence Macia, Alison N. Thorburn, Lauren C. Binge, Eliana Marino, Kate E. Rogers, Kendle M. Maslowski, Angélica T. Vieira, Jan Kranich, Charles R. Mackay. Microbial influences on epithelial integrity and immune function as a basis for inflammatory diseases. Immunological Reviews 2012; 245(1): 164 doi: 10.1111/j.1600-065X.2011.01080.x
187
Wojciech Marlicz, Karolina Skonieczna-Żydecka, Konstantinos John Dabos, Igor Łoniewski, Anastasios Koulaouzidis. Emerging concepts in non-invasive monitoring of Crohn’s disease. Therapeutic Advances in Gastroenterology 2018; 11: 175628481876907 doi: 10.1177/1756284818769076
188
Caterina Carco, Wayne Young, Richard B. Gearry, Nicholas J. Talley, Warren C. McNabb, Nicole C. Roy. Increasing Evidence That Irritable Bowel Syndrome and Functional Gastrointestinal Disorders Have a Microbial Pathogenesis. Frontiers in Cellular and Infection Microbiology 2020; 10 doi: 10.3389/fcimb.2020.00468
189
Ruijing Geng, Han Liu, Kianann Tan, Zhiqiang Wang, Weimin Wang. RNase1 can modulate gut microbiota and metabolome after Aeromonas hydrophila infection in blunt snout bream. Environmental Microbiology 2021; 23(9): 5258 doi: 10.1111/1462-2920.15564
190
Sergio Gutiérrez, Jenifer Pérez-Andrés, Honorina Martínez-Blanco, Miguel Angel Ferrero, Luis Vaquero, Santiago Vivas, Javier Casqueiro, Leandro B. Rodríguez-Aparicio. The human digestive tract has proteases capable of gluten hydrolysis. Molecular Metabolism 2017; 6(7): 693 doi: 10.1016/j.molmet.2017.05.008
191
Ji Wang, Wei-Dong Chen, Yan-Dong Wang. The Relationship Between Gut Microbiota and Inflammatory Diseases: The Role of Macrophages. Frontiers in Microbiology 2020; 11 doi: 10.3389/fmicb.2020.01065
192
Ann Catherine Archer. Probiotic Research in Therapeutics. 2021; : 1 doi: 10.1007/978-981-33-6236-9_1
193
Zuzana Zakostelska, Miloslav Kverka, Klara Klimesova, Pavel Rossmann, Jakub Mrazek, Jan Kopecny, Michaela Hornova, Dagmar Srutkova, Tomas Hudcovic, Jakub Ridl, Helena Tlaskalova-Hogenova, Bernhard Ryffel. Lysate of Probiotic Lactobacillus casei DN-114 001 Ameliorates Colitis by Strengthening the Gut Barrier Function and Changing the Gut Microenvironment. PLoS ONE 2011; 6(11): e27961 doi: 10.1371/journal.pone.0027961
194
E.A. Kyrian. Optimization of the diagnostic search of patients with ulcerative colitis. Shidnoevropejskij zurnal vnutrisnoi ta simejnoi medicini 2019; 2019(1): 109 doi: 10.15407/internalmed2019.01.113
195
Roberto de Paula do Nascimento, Ana Paula da Fonseca Machado, Julio Galvez, Cinthia Baú Betim Cazarin, Mario Roberto Maróstica Junior. Ulcerative colitis: Gut microbiota, immunopathogenesis and application of natural products in animal models. Life Sciences 2020; 258: 118129 doi: 10.1016/j.lfs.2020.118129
196
Gauri S Khatri, Christine Kurian, Asha Anand, Paari KA. Gut Homeostasis; Microbial Cross Talks in Health and Disease Management. Current Research in Nutrition and Food Science Journal 2021; 9(3): 1017 doi: 10.12944/CRNFSJ.9.3.28
197
Yeong Yeh Lee, Siti Asma Hassan, Intan Hakimah Ismail, Sze Yee Chong, Raja Affendi Raja Ali, Syafinaz Amin Nordin, Way Seah Lee, Noorizan Abdul Majid. Gut microbiota in early life and its influence on health and disease: A position paper by the Malaysian Working Group on Gastrointestinal Health. Journal of Paediatrics and Child Health 2017; 53(12): 1152 doi: 10.1111/jpc.13640
198
Yuseok Moon. Diet, Microbiome and Health. 2018; : 409 doi: 10.1016/B978-0-12-811440-7.00014-4
199
Jie Liang, Su Mei Sha, Kai Chun Wu. Role of the intestinal microbiota and fecal transplantation in inflammatory bowel diseases. Journal of Digestive Diseases 2014; 15(12): 641 doi: 10.1111/1751-2980.12211
200
Jean Guy LeBlanc, Alejandra de Moreno de LeBlanc. Probiotics, Prebiotics, and Synbiotics. 2016; : 755 doi: 10.1016/B978-0-12-802189-7.00057-5
201
S. Oliva, G. Di Nardo, F. Ferrari, S. Mallardo, P. Rossi, G. Patrizi, S. Cucchiara, L. Stronati. Randomised clinical trial: the effectiveness of Lactobacillus reuteri ATCC 55730 rectal enema in children with active distal ulcerative colitis. Alimentary Pharmacology & Therapeutics 2012; 35(3): 327 doi: 10.1111/j.1365-2036.2011.04939.x
202
Claire B. Larmonier, Daniel Laubitz, Faihza M. Hill, Kareem W. Shehab, Leszek Lipinski, Monica T. Midura-Kiela, Rita-Marie T. McFadden, Rajalakshmy Ramalingam, Kareem A. Hassan, Marcin Golebiewski, David G. Besselsen, Fayez K. Ghishan, Pawel R. Kiela. Reduced colonic microbial diversity is associated with colitis in NHE3-deficient mice. American Journal of Physiology-Gastrointestinal and Liver Physiology 2013; 305(10): G667 doi: 10.1152/ajpgi.00189.2013
203
Hengameh Chloé Mirsepasi-Lauridsen, Bruce Andrew Vallance, Karen Angeliki Krogfelt, Andreas Munk Petersen. Escherichia coli Pathobionts Associated with Inflammatory Bowel Disease . Clinical Microbiology Reviews 2019; 32(2) doi: 10.1128/CMR.00060-18
204
Xiaqiong Mao, Jingjing Ma, Chunhua Jiao, Nana Tang, Xiaojing Zhao, Di Wang, Yue Zhang, Ziping Ye, Chenjing Xu, Jingyue Jiang, Shasha Wu, Xiufang Cui, Hongjie Zhang, Xinyun Qiu. Faecalibacterium prausnitzii Attenuates DSS‐Induced Colitis by Inhibiting the Colonization and Pathogenicity of Candida albicans. Molecular Nutrition & Food Research 2021; 65(21) doi: 10.1002/mnfr.202100433
205
Steven A. Abrams, Jorge A. Coss-Bu, Dov Tiosano. Vitamin D: effects on childhood health and disease. Nature Reviews Endocrinology 2013; 9(3): 162 doi: 10.1038/nrendo.2012.259
206
Farnaz Heidarian, Zahra Noormohammadi, Hamid Asadzadeh Aghdaei, Masoud Alebouyeh. Relative Abundance of Streptococcus spp. and its Association with Disease Activity in Inflammatory Bowel Disease Patients Compared with Controls. Archives of Clinical Infectious Diseases 2017; (In Press) doi: 10.5812/archcid.57291
207
Lea-Maxie Haag, Britta Siegmund. Exploring & exploiting our ‘other self’ – Does the microbiota hold the key to the future therapy in Crohn's?. Best Practice & Research Clinical Gastroenterology 2014; 28(3): 399 doi: 10.1016/j.bpg.2014.04.001
208
E. Varela, C. Manichanh, M. Gallart, A. Torrejón, N. Borruel, F. Casellas, F. Guarner, M. Antolin. Colonisation by Faecalibacterium prausnitzii and maintenance of clinical remission in patients with ulcerative colitis. Alimentary Pharmacology & Therapeutics 2013; 38(2): 151 doi: 10.1111/apt.12365
209
Francesca Di Cesare, Matteo Calgaro, Veronica Ghini, Diletta Francesca Squarzanti, Annachiara De Prisco, Annalisa Visciglia, Paola Zanetta, Roberta Rolla, Paola Savoia, Angela Amoruso, Barbara Azzimonti, Nicola Vitulo, Leonardo Tenori, Claudio Luchinat, Marco Pane. Exploring the Effects of Probiotic Treatment on Urinary and Serum Metabolic Profiles in Healthy Individuals. Journal of Proteome Research 2023; 22(12): 3866 doi: 10.1021/acs.jproteome.3c00548
210
Thabata Koester Weber, Isabel Polanco. Gastrointestinal Microbiota and Some Children Diseases: A Review. Gastroenterology Research and Practice 2012; 2012: 1 doi: 10.1155/2012/676585
211
Arianna K. DeGruttola, Daren Low, Atsushi Mizoguchi, Emiko Mizoguchi. Current Understanding of Dysbiosis in Disease in Human and Animal Models. Inflammatory Bowel Diseases 2016; 22(5): 1137 doi: 10.1097/MIB.0000000000000750
212
Postbiotics: An alternative and innovative intervention for the therapy of inflammatory bowel disease. Microbiological Research 2024; 279: 127550 doi: 10.1016/j.micres.2023.127550
213
Hengameh Mirsepasi-Lauridsen. Therapy Used to Promote Disease Remission Targeting Gut Dysbiosis, in UC Patients with Active Disease. Journal of Clinical Medicine 2022; 11(24): 7472 doi: 10.3390/jcm11247472
214
Cinzia Casu, Giovanna Mosaico, Valentino Natoli, Antonio Scarano, Felice Lorusso, Francesco Inchingolo. Microbiota of the Tongue and Systemic Connections: The Examination of the Tongue as an Integrated Approach in Oral Medicine. Hygiene 2021; 1(2): 56 doi: 10.3390/hygiene1020006
Write to the Help Desk
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

California Corporate Number: 3537345